LOCUS       DBBXOW010000001       110521 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.001, whole genome shotgun sequence.
ACCESSION   DBBXOW010000001 DBBXOW010000000
VERSION     DBBXOW010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 110521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 110521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..110521
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.001"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(39..1358)
                     /locus_tag="ACJE1S_000001"
     CDS             complement(39..1358)
                     /locus_tag="ACJE1S_000001"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HGG0805588.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSTIFKIIKVFFIAFLLSNCIYLS
                     FFENIFTQAISSFLAIWGLVLLLKSKSPKQYFWIGFFVGILWFWWIGLSSIYFDLNYL
                     VPIVIILIGIVYGILFRICYLFKFDFLRLCGIFCLSFIHPLGFDWLNWGVYTVYGFFD
                     PSYRGIICIFLLAYIIHENYISRYYKIAILLIIFFIGFQYDEKKSEELNLSYKLISTD
                     ISQDQKFLQENVSVNSDNLIKEIIQAINEKKELVILPETAFAFNLKNTLYEKMLKELS
                     YQIIIITGAFNIQEGKTYNSTYIFKGGNSYILNKHFLVPFGEEIPFFKKTIQKYFLPN
                     IAEFDQGPLQSKYKLNDQIITNAICYEATKEQNYKNSKIIIAISNNAWFNYSSEYKLQ
                     KLLMQFYASKYGVSVYHATNGKESGVIKPKEKFVQKIKNYFNKQDKS"
     gene            1331..1603
                     /gene="yajC"
                     /locus_tag="ACJE1S_000002"
     CDS             1331..1603
                     /gene="yajC"
                     /locus_tag="ACJE1S_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HGG0805589.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEDDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1596..3176
                     /gene="secD"
                     /locus_tag="ACJE1S_000003"
     CDS             1596..3176
                     /gene="secD"
                     /locus_tag="ACJE1S_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HGG0805590.1"
                     /translation="MRNSKITYRLVVFIAVFIFGVVFSLPSFLQSERGVKINLGLDLQ
                     GGLYMLLGVDNQEAVKSKIKSVASSLSYSFNKENILNDGLNIHDDSLDFTLLDNADIV
                     KTENLLKEINGLNVQREDMHYTISFTSEEVKSIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGEDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMSQASNMSDAEAAS
                     YGLVLVPDSRNPNLKYPLKSIPILDGSMLTDARVGLSDTSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASIFIVVFMVLYYGMAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLREGANIKASIEQGYK
                     NAMSAIIDSNITSLVTSIALYAYGTGAVKGFAVTLGIGIVVSMITAIWGTHGMFDYSM
                     RRIEKSNNTRFWFGYRRK"
     gene            3176..4147
                     /gene="secF"
                     /locus_tag="ACJE1S_000004"
     CDS             3176..4147
                     /gene="secF"
                     /locus_tag="ACJE1S_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HGG0805591.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSIVLFFGSIYLLWDRGLQFGID
                     FSGGTLIQLKYDTAAPIPQIREILEKQGSFQNLSVTEFGSKEEITIRFLGSNDSLGSD
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGIMAIIVSLVAILIYIAIRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKSELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIVVGT
                     LSSIFVASPTLLWFKFSVIDFRNKELEKLKRKQEKERNRAMYEKGTV"
     gene            4158..6590
                     /gene="leuS"
                     /locus_tag="ACJE1S_000005"
     CDS             4158..6590
                     /gene="leuS"
                     /locus_tag="ACJE1S_000005"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HGG0805592.1"
                     /translation="MAYDANLIEKRWQEIWDKNEYFEPKDDLTLPKKYILSMFPYPSG
                     RIHMGHVRNYSIGDAIARYYRKIGYNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKNELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMYEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLSELENLKDKWPSQVLTM
                     QENWIGKSEGLEFSLNLDKESLEKTKTQSFEVFTTRADTIYGISYVALAPEHKIVQNL
                     IQANCLDDEKVEQIKNMQKQSARERQIADKEGCFLGIYAIHPLTQEKLPVWVANFVLA
                     DYGSGAVMAVPAHDERDFEFANKYKLEIKQVIECEDTQLPHVQKTGKLIQSGEFNGFD
                     CNEVRARIISKFEDEKLGKRVINFKIRDWGVSRQRYWGAPIPMVKCKNCGIVPQKIEN
                     LPITLPEDIQITGEGNPLEKHPIWKNCTCPKCGQEAQKESDTLDTFFESSWYFARFAS
                     DEKTWQEKALDKESVKYWMNVDQYIGGIEHAILHLLYARFFQKVLKDLGYLEDNEPFA
                     RLLTQGMVLKDGAKMSKSKGNVVDPDDIINKYGADTARLFILFAAPPAKELEWNDDAV
                     EGAYRFICRLYDRAQNVRAGELLEFKHDDLNKEEKYARLKVYEALKKSFEVYTQSFAF
                     NTLIAACMEALNALAPCKNEALEQEAFYIILNILEPIIPHVCFELSDKLFKCENFKVL
                     NLKEEVFVKDSLNLGISVNGKKRGEIEVSSSASQDEILELAKQKVSKWLEGKNIVKEI
                     YVEGKLVNLVIK"
     gene            6587..7099
                     /gene="lptE"
                     /locus_tag="ACJE1S_000006"
     CDS             6587..7099
                     /gene="lptE"
                     /locus_tag="ACJE1S_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HGG0805593.1"
                     /translation="MKGILFFIVALFLGACGYVPTSKVADNIFDDKVYVNVELSLQDP
                     RNSIFVADTLKEMVISKLGRRLALKHEADDVINVRMNNLEFIPLIYDQNGYVVSYKAK
                     LNLEFKVVFKDGSVEHFNTSGSYNFDISPNSIISDTARYEAIRSASSEAFDEFISVIA
                     IKGQKRAAQY"
     gene            7083..8486
                     /locus_tag="ACJE1S_000007"
     CDS             7083..8486
                     /locus_tag="ACJE1S_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805594.1"
                     /translation="MLPNINEIAKETLITLKDRKLRPTPENYTEIFEELSKKYGLISS
                     NKAKLEKYKALLLPNYQQELNSKSIRTLEELISFLISALNRQNGKQFSEFFDFLATLS
                     KSLQVSKDKKIRDLAKITSIRISKTMDSESIYLLSKKWKEFEKNYNENDLEGGLRRYG
                     IAKYDDFDTVVKKLLNKLEERSLEVFAELLASCLNPSLVEDLKIHGFAQNLLQKPFLL
                     SESGFKNELLEFVNRRVMVDNMYVQKNLNFFNDNLKKIYELFMLLNKSNEQNMDFINT
                     LKPDKQGEIKLSFELLKQKFIQLNERINSLNAQIEFTQNLEERESWSVLKELERLDEN
                     YNKYKVNYSLALFSIKNYRFIMERYGVGSLNEIFVRFKKILKDNCSEFDELWMIDEKS
                     YLIISPGRNKEKVAQLVRENLKTIENFRFIYKQDIITPKIITAYLDKQSKPHANILEE
                     LMNQISNLDERNNAKDQ"
     gene            8458..9645
                     /locus_tag="ACJE1S_000008"
     CDS             8458..9645
                     /locus_tag="ACJE1S_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HGG0805595.1"
                     /translation="MKETMQKISKVDEFLVQKSTNYDKIDRFVMFRMYEKYKTNFSIK
                     PIVHIIGTNGKGSTGRFLTQLLEGLGFKVGHYTSPHIFEFRERFYKNGDIISENDLEL
                     AHENLLDIFKDNLKKLSYFEYATFLAVELFKDCDYAIFEAGVGGEYDATSVFDKSLSI
                     FTKVGFDHTQILGDSLEKIARTKFKVMAKQALISSEQDERVLQMAQKIAFLKNTKLYF
                     SWQLKDENLMQLNEYVQKYDLPEFLRHNLILALNALEILLSKEKLSQALLKLGKLNLK
                     GRCEQIAPHLYVDVGHNVMAASALCKKFSGEKLVLIYNSYLDKDIFEILKTLKPIIDT
                     IKIYKYVSLERRLANDKIYQVANALNLKCEEFVSLDEKKKTLVFGSFALVESFLKEWS
                     DKK"
     gene            9632..10534
                     /locus_tag="ACJE1S_000009"
     CDS             9632..10534
                     /locus_tag="ACJE1S_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG0805596.1"
                     /translation="MIKNKFTITITDINGSRHFYLNQIIKKIVLYVVAFIFLFLIFSG
                     FYIKYLDSKLSDISTKREELLAKSKELELANAQMQKNVEEKAKQYAAIEDKIASFEEA
                     LGLEAENNLTITDRLDNLKLTNEQQIGILGQIPNGWPIENKGVTGNFGWREHPLLKRR
                     EFHPGIDLRAAIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMVRKDV
                     VKAGQFVNKGQLIGYTGNTGLSTGPHLHYEVRFINKTLEPLYFLNLERKNMNEFFNQE
                     RRVPWQSLIKAVTAQHLAPVPKQQ"
     gene            10471..10866
                     /locus_tag="ACJE1S_000010"
     CDS             10471..10866
                     /locus_tag="ACJE1S_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HGG0805597.1"
                     /translation="MAIFNKSGNGTALSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     NGIVHSESIVVIGKNGNLKGELKADKIVVNGCFEGDLEADSLEILAGGVVSGNISIKD
                     LAIENGGRFNGTSKIKQEEPVRLLENSSE"
     gene            10866..13802
                     /locus_tag="ACJE1S_000011"
     CDS             10866..13802
                     /locus_tag="ACJE1S_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004290191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG0805598.1"
                     /translation="MQANFFEYLQDSNIAQLVLCEDDKESFLLSQVALFKDLKTFVLP
                     DFRAEFGDDLRAFSKELFELCKVLNAYHKEKDTKILISPLSTILKKLPGQKHLKNYKL
                     SKKNVFNLSEFKNELNKLGYEFVDMVQDKGEVSIRGEIIDIFCINEELPTRVLLFGDE
                     LESIRKFDPMNQKSFPKEYEELEICPFLTYFSEENYENFKDKLENFNSDVLINDINSL
                     GFWCIDDFCDYLELDFISIKKFNQEEWDKDLSKINAKIIPQASVYKDLKSSYNKDFFS
                     LQQNKKITILAKNEALFKALELENTQNISFQKSDLILNLISNQELIISLNHKEKQKYK
                     RKANLIIDELKIGDFIVHEDYGVGKFLGLEMISISGAKKEFVAIEYQNSDKLLLPVEN
                     LYMIDKYLGASGGIPLLDRLGKMTFIRLKERLKTKLLAIASEIVIMAAKRALIKPKEI
                     KIDYADQAYFVSKAGFSYTQDQNKACEEILNDFENGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFFFAPTTLLSHQHYKSLKKRFEPFGIEVFKLDRFTSTKEKKTLMLNL
                     EQNKACVVIGTHALLNVECENLALVIIDEEHKFGVKQKEKLKELTQNSHLLSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRLDVRTFVKENDDALLKEAITRELRRGGQIFYIHN
                     HIASIEQCKKHLLDLFKNLRILILHSKIDAKIQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTMIVERSDRFGMADLHQLRGRVGRSDRQGYCYFLVENKEELTQDALKRLVSL
                     ESNSYLGAGSVLAYHDLEIRGGGNLLGIDQSGHIEQIGLSLYLKMLEDELNALTKKES
                     FEEKKIDLKLTINAFLNSELINEDRLRLELYRRLSKCKNIDEVYEIEGEIEDRFGKLD
                     LYTKQFLMLIIIKILALGKFKTISNFEQNIQFVKINDEKEFIKARSKDDDDIIEAVLT
                     HLRKDK"
     gene            13806..14567
                     /locus_tag="ACJE1S_000012"
     CDS             13806..14567
                     /locus_tag="ACJE1S_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG0805599.1"
                     /translation="MDWDKTYAAIYRSRKDYLKPIIDLDNIGLNDLLGMEEQKNVLYQ
                     NTLNFIHNKGANHALLWGAKGTGKSSLIKAIFNEFKDKGLRLVELAKDDLFALVDIID
                     ELREQPFKFILFCDDFSFEKNDDSYKFLKPLLEGSIEAPPQNIIIYASSNRRHLLSES
                     MSDNQGVQVAHTELHASDAAEERLSLSDRFGLWLSFYQGNLNEYLKLVDFYFKDIKCD
                     KELLHKKAKEFANLRASRSGRTAKQFYLAFKESIE"
     gene            14564..15247
                     /locus_tag="ACJE1S_000013"
     CDS             14564..15247
                     /locus_tag="ACJE1S_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyladenine DNA glycosylase"
                     /protein_id="HGG0805600.1"
                     /translation="MNGADIFKKLLACNLDFKEFDWLENQGLSDFELLISVILTQNTK
                     WDNVLKALNNLKNARISSLEQLSNLSNLELATLIKPSGFYNTKAKRLKELANKILDTY
                     SNIENFKKNVDREWLLNTKGLGFESVDSILNYLCKREILVVDSYTQRLATHLGYEFEN
                     YEELREFFESGIENEQENLCQILEKKYELFELYQIFHAAIIAFGKVAFKGVKLTLEGE
                     NLIQNLKEE"
     gene            15247..16059
                     /gene="thiD"
                     /locus_tag="ACJE1S_000014"
     CDS             15247..16059
                     /gene="thiD"
                     /locus_tag="ACJE1S_000014"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HGG0805601.1"
                     /translation="MKAKGSDLIPVLSIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPVQSVDEQMLAVFEDIVPKATKIGMIGTCELMECVARNLEKF
                     KPQNIVIDPVMFAKNGFALMPQENCDFFKKTIVKFADILTPNIPEAEFLCDFKIKNEE
                     DMIKAAKYLCTQGAKAVLLKGGHSEENANDVLFDGNEIFILKGERIETKNTHGTGCTL
                     SSAIASNLALGKDLYNAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFRFLNEK"
     gene            16049..16681
                     /gene="thiE"
                     /locus_tag="ACJE1S_000015"
     CDS             16049..16681
                     /gene="thiE"
                     /locus_tag="ACJE1S_000015"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HGG0805602.1"
                     /translation="MKNDLDLSLYLVASRGKKSDELFLNTLEEAIKGGVSIIQLREKE
                     LSSREFYKLGLKVQKLCKEYEIPFLINDRIDIALALDADGVHLGQEDLEVRFARKILG
                     KEKIIGLSLKNLEQLKDIDGADYLGCGAIKATPTKESSVISFETLSQICEKSPIGVVA
                     IGGIDKELIKELKGIKISGIAVVRAIMDAQNAYLATKELRQEMNENLSFK"
     gene            16659..17288
                     /locus_tag="ACJE1S_000016"
     CDS             16659..17288
                     /locus_tag="ACJE1S_000016"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HGG0805603.1"
                     /translation="MKIYLLNETVFEGVENLVLNEIVFYDFGVNLDEFDALLCTSKNA
                     LKALKKTKNSLNLDINVYAVGQNTAQFAKDMGFKKVQFAPKSYGSELFNHFKEELKNQ
                     KCLYLRAENIASTLNLDLRTYGVDLQEIIVYKNVFKKSKQTILHPAIFIFTSPLSVEN
                     FFKQYDLKKEDKVIAIGQSTAKKLTHLDNLFISSKQDLKECVKLAKSLI"
     gene            complement(17281..17733)
                     /locus_tag="ACJE1S_000017"
     CDS             complement(17281..17733)
                     /locus_tag="ACJE1S_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805604.1"
                     /translation="MKRAYILLSLVFLISALGIWLSLNITTSSYIPRFVKDAYYYLQA
                     QILADEKLVKYLLYQAKLDGKECLDSITLHYPNLNDKIKIQYHYPIAQCKNFKFQAIN
                     KDANLSQDGIIIAHMSIALNTQKNVNDEILINKTFILHTKESFWNQTK"
     gene            complement(17730..18398)
                     /locus_tag="ACJE1S_000018"
     CDS             complement(17730..18398)
                     /locus_tag="ACJE1S_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805605.1"
                     /translation="MNKAFSLFETILVLILIGFLALFLSRTLWEFYYLNNQQLKMKDL
                     ILKTHLSVLRLEKLLQTCTNITFEPNHISCLLKDDLLYLDDNKEKLLNSSLILENNTS
                     LYSPNSNFKLQLQNRKELYNDEQNIIYALVNKEIKKIFIHSENNITASFKGKFIPIQA
                     RIKLFLKEDKIHYELYPYFDNQLEQYSIFMDNVSLFEIQKQKLKVCLKEQEQEYCLTK
                     RLFI"
     gene            complement(18391..18696)
                     /locus_tag="ACJE1S_000019"
     CDS             complement(18391..18696)
                     /locus_tag="ACJE1S_000019"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805606.1"
                     /translation="MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERL
                     YTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFINDNIFQFKKLHIQNQDYSLYFYDE"
     gene            complement(18693..19430)
                     /locus_tag="ACJE1S_000020"
     CDS             complement(18693..19430)
                     /locus_tag="ACJE1S_000020"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HGG0805607.1"
                     /translation="MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEG
                     FKTLLYKDFNIENKNIILAFKPYALESVAANLKGKAKILISVLANTDFDKLKLIQAQN
                     YARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
                     APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAG
                     VTIKGIKVLEQKGIRGTFFEALNASAT"
     gene            complement(19430..19819)
                     /gene="fliW"
                     /locus_tag="ACJE1S_000021"
     CDS             complement(19430..19819)
                     /gene="fliW"
                     /locus_tag="ACJE1S_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HGG0805608.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFEIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     SMVQVILDTVAYPNFFQADQIANYIKK"
     gene            19983..20630
                     /locus_tag="ACJE1S_000022"
     CDS             19983..20630
                     /locus_tag="ACJE1S_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HGG0805609.1"
                     /translation="MKKNFFLCILLGILFSACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHIADPLLETTQIILAQAHMDEEEYQLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDSFLNDYPYTEYEPLVQTMLTKFN
                     LAVFYLNDTIQDLYERTGHTQSAEIYQERLQESEFYQQSIIKPELPWYRSIFEKF"
     gene            20646..23021
                     /gene="lon"
                     /locus_tag="ACJE1S_000023"
     CDS             20646..23021
                     /gene="lon"
                     /locus_tag="ACJE1S_000023"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HGG0805610.1"
                     /translation="MQIEEMQNYPSNLPILVEDELFLYPFMITPIFISDSANMKALDL
                     AIKNDSMLFVAPSKLENGRSFDEIYDCGVVGTIMRKVPLPDGRVKILFQGYAKARIIK
                     PLSSKPLEAKIELIKEEFLEGTKKEALLDVLKEKVRALANISHYFSPDLLRTIDEGLD
                     ASRICDLILNTVRIKKQEAYQFFILTDLEEKLLKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDNQKEDEVRDYYKKLESKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDVPFEKIAKKKLDIKEVAKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRGVADKDGAKVILCLYGPPGVGKTSLANSVAKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVVVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNLDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPNEKF
                     HITKKYLIPDELKKHGLKSSELDINDETIELIISEYTRESGVRNLRRKIAELCRKSAK
                     KLLLENIKKVSINVKNLNEFLDKKVFEIEKHDGENRIGQVNGLAWTSVGGDVLKVEAI
                     KIKGKGELTLTGSLGDVMKESARIAFSVIKVLIDEGKIKIPKKMILDPKTNVYDSYNL
                     HIHVPDGATPKDGPSAGITMSTAIASVFSDKKVRSDVAMTGEIDLAGNVLPIGGLKEK
                     LIAAYKADIKIALIPKKNYERDLKDIPDEVKDNMKIIGVKDFDEVLKYALV"
     gene            complement(23077..23337)
                     /gene="rpsR"
                     /locus_tag="ACJE1S_000024"
     CDS             complement(23077..23337)
                     /gene="rpsR"
                     /locus_tag="ACJE1S_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HGG0805611.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVVNNPFEGL"
     gene            complement(23348..23896)
                     /locus_tag="ACJE1S_000025"
     CDS             complement(23348..23896)
                     /locus_tag="ACJE1S_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG0805612.1"
                     /translation="MFNKVVLVGNLTRDIEMRYGQNGNAIGASAIAVTRRFTTNGERR
                     EETCFIDISFYGRTAEVANQYLSKGSKVLIEGRLRFEQWNDQNGQMRSKHSVQVENME
                     MLGNNPQQGGNFNNGGNNYGANNNYSNYENQSYDPYMSENNFKKAPQQAQTKTQNPNQ
                     NQEKIKEIDVDAYDSDDTDLPF"
     gene            complement(23905..24282)
                     /gene="rpsF"
                     /locus_tag="ACJE1S_000026"
     CDS             complement(23905..24282)
                     /gene="rpsF"
                     /locus_tag="ACJE1S_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HGG0805613.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLVKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERILRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            24562..25833
                     /locus_tag="ACJE1S_000027"
     CDS             24562..25833
                     /locus_tag="ACJE1S_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805614.1"
                     /translation="MQNAKPIRWFTFIVLVIGGGTVFKLSSLKDAFYVPMQEFMNLSN
                     TQIGLALSVYGIVQTVGNFASIYIADRFSKKILIPFSLICVGLVGIYISTFPSFYGIL
                     IAWGLLSLFGEVVYWPVLLKAIRLLGDSTQQGRLFGFLEAGRGVVDTIVAFSALGIFL
                     LLGSGAGGLKAAILFYSACVIIAGILAYFLLEDDKISTKDDEGHEISKNKAAWNGVIK
                     AVKTPEIWVVSLTIFTIYSVYCGLTYFIPFLKDIYGMPVALVGAYGIINQYTLKLVGG
                     PIGGYLADKTFRSSTRYLRFALILAAVAILIFIFMPHEKLNIYFGMSLTLGFAAIVFT
                     MRATFFAPVDEIEMPREISGAAMSIACIFGYSPQLFCFALYGFIIDQFKGLLGYQIVF
                     ALMGFFAICGVIITTILLRMIAKKKTLQEVA"
     gene            25833..26834
                     /locus_tag="ACJE1S_000028"
     CDS             25833..26834
                     /locus_tag="ACJE1S_000028"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HGG0805615.1"
                     /translation="MKIGLETESMHLWFQNGRMDIFSYIDFAEELGCDGIIINIIKDF
                     GLDEEWGCLGSNDESHLKKIKEKLDTYGMYCEIDSKGFDKDKFEKIAKVSQLLGVKII
                     RSYVPLTDKNKKVKNASDGAYDDSKITAKFDKSEFLSTADEIKALIPLLEEYDLKLAI
                     ENHEYQTSDDLLELLNLIHHPRIGFLYDFGNSMMAYEEPIKACENMAKHTFSTHCKDH
                     IVFIEDDTKYVCGVPLGEGNLDIKTCVEILKQAGLDRINVEQCYPYCATFKREEGAGG
                     IKELGKGAFKIEKPLFNDLKAMQYYYPQEVSKEHLERLLILQKEGCERSVKYLKSII"
     gene            complement(26827..27684)
                     /locus_tag="ACJE1S_000029"
                     /pseudo
     CDS             complement(26827..27684)
                     /locus_tag="ACJE1S_000029"
                     /inference="COORDINATES: protein motif:HMM:NF016293.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
     gene            complement(27681..28784)
                     /gene="rseP"
                     /locus_tag="ACJE1S_000030"
     CDS             complement(27681..28784)
                     /gene="rseP"
                     /locus_tag="ACJE1S_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004290180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HGG0805616.1"
                     /translation="MKSLLFLALILILGFKFYSIEFLATILVISFLIFFHELGHFLAA
                     KSLGVKVEIFSIGFGQSLFEREFKGTKYRLSALPLGGYVKLKGQDDMQPGLENQDQDS
                     YSILSPMKKIYILFAGPFFNLFLAFLLYIAIGNLGIQKLSPQIGNIAPNSAAALAGLE
                     NNDTILAINGIKIQSFDEISNHLSLEPLKILIDRKGENLEFLITPKLGQAYNDFGQVV
                     SKAQLGVSPSGSTTIIYHQGMQSINYALDESIKASTLIVKGIIKLISGEVEAKNLGGI
                     ITMTELTSKAAEKSLVVLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PPRAFEYLSYGGMALLLSLMVFATFNDIMRVMQ"
     gene            complement(28781..29317)
                     /gene="pgsA"
                     /locus_tag="ACJE1S_000031"
     CDS             complement(28781..29317)
                     /gene="pgsA"
                     /locus_tag="ACJE1S_000031"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HGG0805617.1"
                     /translation="MNIPNTLAVLRMILAPLLFFLLSYKFDNIHQSWINYFAALTFAL
                     AALSDFFDGFIARTLQQTTKLGGILDPLADKMLTLAAFLGLLLSGKANEWIVYLILVR
                     EFFITGFRVVMVSENLNVNASFTGKLKTTFQMIAIGFLTMEWIGGDILLYIALFLTLY
                     SGFEYIFSYVKQSKGKLQ"
     gene            complement(29468..30073)
                     /locus_tag="ACJE1S_000032"
     CDS             complement(29468..30073)
                     /locus_tag="ACJE1S_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG0805618.1"
                     /translation="MKTELEIFSTRYSCRNFKNEKLKKEDLDTILEIARLSPSSLGLE
                     PWRFLVVQDDNKKEELAQICNQQQHVKDCGALIIIVSRLDFLDYFEDKLRKRDMSEAE
                     IQKRLDTYMPFLQSLSQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLLLDTKKEKSTLVIALGYSNDEKIPQKNRFEFDKIVQFL"
     gene            complement(30073..30694)
                     /locus_tag="ACJE1S_000033"
                     /pseudo
     CDS             complement(30073..30694)
                     /locus_tag="ACJE1S_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
     gene            complement(30758..31184)
                     /locus_tag="ACJE1S_000034"
                     /pseudo
     CDS             complement(30758..31184)
                     /locus_tag="ACJE1S_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(31196..32284)
                     /locus_tag="ACJE1S_000035"
     CDS             complement(31196..32284)
                     /locus_tag="ACJE1S_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HGG0805619.1"
                     /translation="MKHLLFLIGDELIMNENFKDYIYRSYENKFKEIHETRFQNKTDK
                     ELPFLLEKLLDNYDFITLFTTPNHYATIAKILATLSEDNLVLKEDNLVPDKAYFQKDS
                     FICDFINSKINVIKTNPGQKLPPLLGDIFPNFAYFCLLGIDDESAVLLLDTLTKSYEV
                     SIKSSKILENLTLIKASCVNFGKLDGFLTSVKNLFGQKVFLGKDPIQFIVSKLLEKKI
                     KISFAESCTGGLCASTLTKFSGVSEIFEGSIVSYSNKIKHEWLGISESILENQGEYSE
                     RCVYFMLKGIFKTAKPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            32375..35131
                     /gene="ileS"
                     /locus_tag="ACJE1S_000036"
     CDS             32375..35131
                     /gene="ileS"
                     /locus_tag="ACJE1S_000036"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HGG0805620.1"
                     /translation="MDYKDTLLLPNTTFAMRANLAEFEPKRFEKWFSKNYAYEKMKTK
                     RKEAKKAFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFNGESIRFTPGWDCHGLP
                     IEQQVEIKLGDKKKSLSKKEIRSFCREHANEFVNIQRDEFKSLGVIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYEDKEDYSIFVAFDLD
                     EQSCQKLGISKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLESMIAK
                     GLTKGEIQKELNAKEFEKLEAINPLNSRKSILIMGEHVLMEGGSGLVHTAPGHGEDDY
                     YACLKYDIEVIMPVDDGGCYDETLRHKGLLPSDLLDEFIGLHIFKANEKILELLGNHL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLKGKTLRECAKEQILKTKFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDAELFDFVANIFEKHGA
                     DAWWEFEIKDLIPQNSKYNADNLEKVYDILDVWFDSGSSWNAVLNSGIYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINEFAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSTDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLENLEV
                     EEFSFIDKWVLTRATRVFKSAKENFLAYEFAKGFNVLLNFLSADLSGIYLDISKDRLY
                     CDAKNSKRRKSAQVAMALIARELLNLLAPNLTYSVDEALEHANSLIKGDAKDVFDLSL
                     EEKFEYDFNIDDEFLLSVREKFFENIDILKKDKVIKSTLELNLDTNSKLLNSIPKDEL
                     NDWFMVSFDENLQGEVLCEFEVENESFRIMKATLCKCPRCWKVESAKEDEPCMRCAEV
                     LKHA"
     gene            35124..35246
                     /locus_tag="ACJE1S_000037"
     CDS             35124..35246
                     /locus_tag="ACJE1S_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805621.1"
                     /translation="MLDNPIPNSIIIATIAITAIFCAVAVVFIKNLAKKQKEKE"
     gene            35243..36607
                     /gene="gatA"
                     /locus_tag="ACJE1S_000038"
     CDS             35243..36607
                     /gene="gatA"
                     /locus_tag="ACJE1S_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HGG0805622.1"
                     /translation="MITLKEALKYSKEELENLKKELNDKAKKENKIGAYIEQFLGKDL
                     SDGGEGIPIAIKDNISVKDWELTCASKILQGYVAPYDATAIKNLRSKGFSPYGRTNMD
                     EFAMGSSSATSFYGKTLNPLNFARVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     KVDFTPTAPNLNAEKKLRIAVIENYVNEASAEVKAALLKSIEMLKANGHEIVYKNMLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSQNTENLKDMYINTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVGEDKEGLNISAQLICKAYDEQTLLDGALSLEKI
                     IKEK"
     gene            36608..38062
                     /gene="guaB"
                     /locus_tag="ACJE1S_000039"
     CDS             36608..38062
                     /gene="guaB"
                     /locus_tag="ACJE1S_000039"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HGG0805623.1"
                     /translation="MNIIKRALTFEDVLLRPCYSEVLPKQVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDITSQVREVKRVKKSESGVIIDPIFVGPK
                     ASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDLRFENDYLNLVENVMTKAPLITA
                     PKGCTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDSFGRLRV
                     AAAIGVGQMDRVDALVEAGVDAVVLDSAHGHSKGIIDTVKSVKEKYPNLDLIAGNIAT
                     AAAAKALCEAGADAVKVGIGPGSICTTRIVSGVGVPQISAIDECAMEAKKYGVPVIAD
                     GGIKYSGDIAKALAAGASSIMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSIGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIKNVVHQLLGGLRSSMGYVGAKDIEDFQ
                     ARAEFVEITSAGLKESHVHDVTITHEAPNYKVNQ"
     gene            38059..38232
                     /gene="xseB"
                     /locus_tag="ACJE1S_000040"
     CDS             38059..38232
                     /gene="xseB"
                     /locus_tag="ACJE1S_000040"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HGG0805624.1"
                     /translation="MSFEENLKNANESLEKLNDKELSLDESVKIYKEGLKSIEKARLA
                     LEKARLEVEHIDE"
     gene            38225..39004
                     /locus_tag="ACJE1S_000041"
     CDS             38225..39004
                     /locus_tag="ACJE1S_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HGG0805625.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDSGANLVVLGEYVLNSF
                     FTELLAMPKSMIKEQSEAKKESLIRLAKKHELEIIAPYISVETKGYKKLCLKVAPNHI
                     KTYEQQVLMPYNHWNEEKFFSNKINKGNLKLFTFNHDKLKCALLFGFEVHFDIFWQQI
                     MAKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTNILRVNRIGTTKDEWSFYGDSML
                     INAFGEIESRLGSEEEMLIVEPKKADEARKIWAFDKIVKNF"
     gene            39068..39325
                     /locus_tag="ACJE1S_000042"
     CDS             39068..39325
                     /locus_tag="ACJE1S_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805626.1"
                     /translation="MRKILLQIFSFSFIFMGIFALVRSLMVKNLTNESENSLMVYMYG
                     LGHDMRTFSAIFLPLFLCGLFSYIGLAFKNRKYNIMGGGNL"
     gene            39522..41036
                     /locus_tag="ACJE1S_000043"
     CDS             39522..41036
                     /locus_tag="ACJE1S_000043"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HGG0805627.1"
                     /translation="MAVIFSIFCIWINIKILNLKLKEIQIKPIFFIFLNILLIYAYVV
                     ALRGHFTYNALRVSSYEFSTIKAFNEISTNPLMAFSWAYKEYKNQQEFKSVDTKQLNQ
                     LEEKLFPMFDTTLPHQNHAKNHIYVNIMESFGLNLAEFSTKKIDLFGNLKKHFEQDIV
                     FTRFLSSANNTIESLNRLIFLSPNTISNGLYQKEELAFTPLQIYKNAGYRIIFVYSGN
                     ASWYNLGNYFKNQGADQIIDENTLMQDFPQAKETKHKYGIADEFMYKKIYSIFENAKS
                     PTLVISLSISTHRPYIHKSKKQLIDTENLDEKILNQFIIDNSTEALNTYAYANDEFGM
                     FLDRIKESKFKENIIIAATGDHRFRDIKMDINSQKAFAYSVPFYLYLPKYLKNDIYYD
                     KNRVGSHKDIFPTLYNLTLNNTKYLSLGGRNMLAPIKNQKLEFGFNEVVWIDQDGVYD
                     GNKGYYFENNASIKDTNKAFELDLYHKNFSKIYKELFQKQLSYRLVNLKTKNNE"
     gene            41096..41641
                     /locus_tag="ACJE1S_000044"
     CDS             41096..41641
                     /locus_tag="ACJE1S_000044"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805628.1"
                     /translation="MKNIHFIVGISAFEKLVGLSNTLNVGVDNKVRIAKNSHEFVGEN
                     KDIEIGANQNTIIHKDEIRNVKRENKLLIEKSLTQTIEKEFFLNVHQNLSAHIQDNTS
                     LKSNSMQTKIEEQYSLESDNSTFDFQTDCEVKAGNQILHQVGDTQIVTKKDCVIIKAG
                     GVEVIIDSNGLVVKGGELKAE"
     gene            41651..41857
                     /locus_tag="ACJE1S_000045"
     CDS             41651..41857
                     /locus_tag="ACJE1S_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805629.1"
                     /translation="MSQTNNNTEIKEQDTQDEIIWEGKKDILSFLLYWITYIVFLCFF
                     LYLFPRLFNKEIDYKWFIVFLHFF"
     gene            41827..42282
                     /locus_tag="ACJE1S_000046"
     CDS             41827..42282
                     /locus_tag="ACJE1S_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805630.1"
                     /translation="MVYSFFTFLLGIYAFARAIYKMANIKRIYVTKEKLVIEYHIKND
                     LVFPLGTFFIYYRKISYSPSPGHIVIHTFGDKAKEYLEPGLFSDGDDPTKGCFERINA
                     IIKPYVMPYLLGLSDEEFEKIFFHINATSEIDTTFLKEAMELRKEKKDE"
     gene            42461..43759
                     /gene="murC"
                     /locus_tag="ACJE1S_000047"
     CDS             42461..43759
                     /gene="murC"
                     /locus_tag="ACJE1S_000047"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HGG0805631.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENSEFKYAKELGIECLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYTQFLDTAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGRYK
                     KITAIFEPHRYTRLATNLKEFAKAFEGVDELVILPVYAAGEEPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            43752..44102
                     /locus_tag="ACJE1S_000048"
     CDS             43752..44102
                     /locus_tag="ACJE1S_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805632.1"
                     /translation="MSRVFLYLLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINISKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIRDCRLNDE"
     gene            44095..46302
                     /locus_tag="ACJE1S_000049"
     CDS             44095..46302
                     /locus_tag="ACJE1S_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HGG0805633.1"
                     /translation="MNEIKEELLLKLDLNTYLYEFKSCFARDKEIFLQGDSHLHFKRI
                     NELCETEFPNLPELSNLDKALVHLSKQGVLHLDEIFEFVKIFRYFEKIKKLNLGSNLN
                     SWLEKIEFVNGILDLCEKFDEKGELKESLDERLVNINTALRLKNESIIAEFKKFCYTK
                     ALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIE
                     KIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLC
                     DQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHL
                     LPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSRKNLLLGIDEI
                     ELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEELS
                     RPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELEL
                     KAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLKD
                     MKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESDG
                     IKLRVSLKLLKKSTPTPKISPKTSISVTKPSNLSVSLDLHGLRSDEALSRLDKFISDA
                     LIAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            46311..50368
                     /locus_tag="ACJE1S_000050"
                     /pseudo
     CDS             46311..50368
                     /locus_tag="ACJE1S_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
     gene            50411..51112
                     /locus_tag="ACJE1S_000051"
     CDS             50411..51112
                     /locus_tag="ACJE1S_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HGG0805634.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAID
                     KIALDIENFMKDGNV"
     gene            51105..51707
                     /locus_tag="ACJE1S_000052"
     CDS             51105..51707
                     /locus_tag="ACJE1S_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HGG0805635.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRFLAIFGFCFLTYMAYLMLKKKNEDLHLDQHKD
                     FKESLLKSYVKGIILNGSNPYVIGFWLSATGIVLSNQHAYSTILGLVVAILFWIGALA
                     FVVAKYSYLFSAKVIRIINIVSALIIEYFALSLLYKTFIG"
     gene            51712..52812
                     /gene="dapE"
                     /locus_tag="ACJE1S_000053"
     CDS             51712..52812
                     /gene="dapE"
                     /locus_tag="ACJE1S_000053"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HGG0805636.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKKGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWKNDPFEPLEEEGFIYARGAQDMKSGVA
                     AFVDAVKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHAAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLRLMFNVRNSPDTNLEDVRAYVEKICHGLNYELE
                     LTQSSEPFLTSIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSVEEFEKLCLVFKDLVENFN"
     gene            52821..55907
                     /locus_tag="ACJE1S_000054"
     CDS             52821..55907
                     /locus_tag="ACJE1S_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type ISP restriction/modification enzyme"
                     /protein_id="HGG0805637.1"
                     /translation="MDIFKKYTSEIQAIFEGKNYNEHSFRTCFENLLNELKPKEVKII
                     HEPKSEKGQGSIRPDFKTYKLIDKEKELSYNHLVGFIECKNLDVDLNLHLKGKQLSKY
                     LQISPNIIFTNYKRFILFSFEKVVFDIDLLDDKLDLKEENISIFRNLLKAYFDDNSTT
                     IKSKQELVKVLSTQSFYLSNALKISFDESDANSSFKRFFRKTKDTFKNIEKIDLKDEE
                     FCDILAQAIVYGFFVSYIENDDYDLEKIPIENFISFLPSTFRTLSEFVYFAIPSFSLP
                     QDIKYTLENIKKTLSLIDKIALCKILNQDLESVSIYLYEDFLKAYDDLRATQKRKEGG
                     VFYTPKSIVDMIVSSLDELLKTKLNKNKGFNDQGVKVLDFATGTGSFLASVFEKIISK
                     ESEVFKNEAIKNKFLKDIYGFELSFVPYIVARLKLGQILRKNGFVNFSDADFQIFLNN
                     TLDLEKIANFDMFMPLENLDTEWKKARDVKHSQDLLVILGNPPYSAKSKNKGEDILEL
                     LKNYKQGLNDKNIQPLNDDYIKFMRFAQWKLLEQNKKDLFEEKKGLLGFITNNSFING
                     KTHRKMRESLYKSFDEIYILNLHGSDKDAKNDENVFDIKVGVCISLFVKYKDEPSNGA
                     KVFYYSTGDNNIFSRKEKFALLDDVRQKGLNAIKWEELSLDEPYFWFIKREFKNKEYE
                     NFWALASDKAEDKKSIFLNYSSGIQTEKDNIAIQLNKQSMENVLKDFKNLTKEENVKK
                     YNLDNSIILNTLTQYENNTGFISKIHYRPFDIQWTFYSEKQGFLGRPRYKTMQHFLDK
                     ENLGLCFIESSIHDYFSHSIVCSNITDGNFFGFRSFTAPLYLYVNNEKIPNFTSEFLA
                     YKENHKILKDKSPEEILYFIYANLYNPRYREKYLEYLKTGFARINFEVEQKTFDDFAT
                     LGKKLVELHLFKRDLKDEIDFIFLKEDKKANFKIEKYQEKDRFIDNKIILNEDLAISP
                     ISAEIWQFTIGGYQVIKQWLKYRNDYKCSKEELEHLLKMCKVIKETINLQKELNDY"
     gene            55897..56088
                     /gene="thiS"
                     /locus_tag="ACJE1S_000055"
     CDS             55897..56088
                     /gene="thiS"
                     /locus_tag="ACJE1S_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HGG0805638.1"
                     /translation="MIINGEKFELKELKFMDFIKEKGFKIELIALELNGEIVPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            56085..56888
                     /gene="thiF"
                     /locus_tag="ACJE1S_000056"
     CDS             56085..56888
                     /gene="thiF"
                     /locus_tag="ACJE1S_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HGG0805639.1"
                     /translation="MMRIKFNGKELDTKLSTSLDFFKSVSKNENDVWIINGFATKENI
                     KIHENDELFCIERNALPPKDALDAMMRARHTPKLHDKLKISSVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVVEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYIKTEICTL
                     KIDEENLPDLFKGIDIVCEAFDGAPAKAMIAQNFHRFYKDTTLICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKVGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            56892..57668
                     /locus_tag="ACJE1S_000057"
     CDS             56892..57668
                     /locus_tag="ACJE1S_000057"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HGG0805640.1"
                     /translation="MQENLKNDSLKIGKYEFKSRFILGSGKYSLELIKSAIEEAKAEI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VIGDSKYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGTPAQACEAMQMGVSAVMANTAIAEAKDI
                     ALMAKAFSLAIQAGRAGYLAGLASVSEAKASSPLTGFLRD"
     gene            57671..58816
                     /gene="thiH"
                     /locus_tag="ACJE1S_000058"
     CDS             57671..58816
                     /gene="thiH"
                     /locus_tag="ACJE1S_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HGG0805641.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLSQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKTKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLSEDEIHEEMQAIAKTGLQEILMLTGEGREFASVEYIAKACKIAR
                     EYFKVVGVEIYPMNEDEYKILHENGCDYVTIFQETYNPLKYSKIHLGGEKRIFPYRFN
                     GQERALRAGMRGVAFAALLGIDDFRKDALATALHAYFLQKAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERVGFRDEVVKLGATKMSAGVS
                     VGIGEHKGEKKGDGQFEISDERGVDEILAMLKNSNLQAVMSDSIYVG"
     gene            58806..59411
                     /locus_tag="ACJE1S_000059"
     CDS             58806..59411
                     /locus_tag="ACJE1S_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HGG0805642.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQVEKLAKSGIDAFVLREKDLSEF
                     EYYDLAKEVLAICAKHKTTCFLHFFDRECLKLGHRYFHMPLALLRQEPKMSKYFHMIG
                     TSVHSKEELLEAMNYGVNYAFVGHIFESSCKKDLEPRGLEFLNSLLSFSQIPLYAIGG
                     INVQNIASFKDINVAGVCMREVLMREKDVKKYLVECKRNLL"
     gene            59426..60316
                     /locus_tag="ACJE1S_000060"
     CDS             59426..60316
                     /locus_tag="ACJE1S_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG0805643.1"
                     /translation="MEQILSLPQDLKQLKGVDYKNFKSCTFAKYTQVSASHSSFVNVG
                     SHLLTFVRKGYKILHTASKDYKIDSYETLFLKAGNYTLSNVGLSSGVYEAYLFFFDNA
                     FLIELIYKYKDLFKLEQASEESEIFWVKNDKILQGILESFTPHFDENTQILDPIVSLK
                     FEEIFLHLLLNKNTYFIGFLAGILKEFRLDLSQLFEYCGREFVSVSEMADFAKLDFAT
                     FSREFKKCFGQSPKKWLDEKRLQKAKVLLEFSKKNVNEIANECAFSSVAWFIERFKEK
                     YNQTPKQYQKSKNLYFLSKN"
     gene            60379..61233
                     /locus_tag="ACJE1S_000061"
     CDS             60379..61233
                     /locus_tag="ACJE1S_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HGG0805644.1"
                     /translation="MKKYVLSLALVGASLLGASELKYQEFDGFKSPESIFVDKNSVYV
                     SNVGEKLEPLAKDNDGFISKLDKNGKVLEHKFISNLNAPKGMMEVANTLYVVDIDVVR
                     GFDLKSKKEVFNLPIKGAIFLNAIEKLNDDTLLVSDTGTGLVLKVDLKAKKYDELLKL
                     DIAKFGGPNGLYLDRKNDKLFIAGYHPDGASGGVVMSYDLNDKKLSVIKNEKEAYDGI
                     VPYENALLVSSWGENLNGVIYRLEDDKALKLDLPSIKGPADIFIEGDTLWIPKMVEGK
                     ILKVELKN"
     gene            61241..62401
                     /locus_tag="ACJE1S_000062"
     CDS             61241..62401
                     /locus_tag="ACJE1S_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805645.1"
                     /translation="MLSFRKIFWLNVAIVIIVAFNLRAPITAIGPMIDIIQDEYNLNS
                     TLAGVLTSLPLIAFGSISFIVGYFSPIRAIIVGIFLIFIAELIRSYLGVYGLFLGMLG
                     IGCGIAIANVLLPSFIKEKFPKKMASMMGIYSLVLSISSIAGIALSMPLLNIFDLAGA
                     MVFWSVFSFIALMIYYPQAKNGRFFRTKKKESKKINLLKNPTTWKITLFMGFQSFLAY
                     SLFFWYVQIIVEKGYDKDFATNMVLFSQLVAAPISLFGPLLLGKLKKSLHTPYIAILC
                     AMYAVSFGILFAFDTRFMIMLAAFIVGFPWGGVFGIALLFIAQKSSNAKIAARLSAFA
                     QGFGYLIAAQGQWIIGFFHDMFGNFTSSICILFIVGILVNIFGYLAYKSKVI"
     gene            complement(62394..63410)
                     /gene="murG"
                     /locus_tag="ACJE1S_000063"
     CDS             complement(62394..63410)
                     /gene="murG"
                     /locus_tag="ACJE1S_000063"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HGG0805646.1"
                     /translation="MTIVLTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDRAW
                     FESETRFKAKFFLSSRGVVNQNKLGKINSLLHTFKLSKECKQIFKDYDIKAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNKLLKPFAKQFYSAFEKEIVPYPVADKFFK
                     KARIRKELKNIIFLGGSQGAKFINDLALNLAPELQKKGINIIHQCGKNELEKYQQAYK
                     DLNIQADVFDFSPHLEEKMQNADLAISRAGASTLFELCANTLPSIFIPYPHAAKNHQY
                     FNAKFLQDKALCQIFMQNNTYPDEILKAIFKLNLEDISTKLKDMAQKNGADILLEKAL
                     KLIK"
     gene            complement(63407..64570)
                     /gene="ftsW"
                     /locus_tag="ACJE1S_000064"
     CDS             complement(63407..64570)
                     /gene="ftsW"
                     /locus_tag="ACJE1S_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HGG0805647.1"
                     /translation="MIADKKLFYLSCILISIGIVFSYSLTVFTVLFFDYNEFHFFIRQ
                     LFFGLSGILIMFFISRLDPDKILAKRIILAILIGSFICIIILPFLPSALATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIKHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGILIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWMADALRVSGNSEPYQISHSLNAIAHGGLFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLFGLGLICFIYLWMILRIFRIAGRCEEKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            64706..66148
                     /locus_tag="ACJE1S_000065"
     CDS             64706..66148
                     /locus_tag="ACJE1S_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HGG0805648.1"
                     /translation="MVQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVGRIIEIAKACGADAIHPGYGFLSENYDFAKACEEAGII
                     FIGPKSEVIHKMGNKNIARKLMAQNGIPIVPGTEKLNAYSMDEIKVFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEEELENAFDSCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPVTEEITGVDLIVRQIRIAGGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFTIDIRTTIPFLIAITKTREFRRGYFDTSFIETHMQELL
                     ENTEDRHQDNKEEVIAAIAATLKKIRESRE"
     gene            66148..66384
                     /locus_tag="ACJE1S_000066"
     CDS             66148..66384
                     /locus_tag="ACJE1S_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805649.1"
                     /translation="MDFFDSLKSIKKEMQTHSKEQKNLKNSNKKDMKHFNKEIKTQPP
                     EMNLDKEMQEVFLKQEKLQDEFLEFIKNADIKKI"
     gene            66384..67103
                     /locus_tag="ACJE1S_000067"
     CDS             66384..67103
                     /locus_tag="ACJE1S_000067"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HGG0805650.1"
                     /translation="MLEIGFCTLEDECPYLKDRRSRIEYKYIENCSKEINSELIRRGW
                     RRFGRYFSRPICKDCKECLSLRILVDEYQFSRSERRVINKNTNTKIILRKPLLSNEHL
                     FLYDKYHRFMEEKKTWKRYDLNFRQYYNLYVDGFMNFGYELAFYVEDKLVCVDLIDWL
                     EDGISSIYCFYDPDFSHLSLGKFSLLSEIKIAKKEKLKYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEILWER"
     gene            67105..67911
                     /locus_tag="ACJE1S_000068"
     CDS             67105..67911
                     /locus_tag="ACJE1S_000068"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG0805651.1"
                     /translation="MQIVQTLETINVNTDDINVFQYFKDLITKNFTKVVGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFANE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(67935..70952)
                     /gene="cmeF"
                     /locus_tag="ACJE1S_000069"
     CDS             complement(67935..70952)
                     /gene="cmeF"
                     /locus_tag="ACJE1S_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HGG0805652.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKINGDLNFVESKVTKEIENALSEIDGVKTITSTAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRIDG
                     VGKIEAKGFLEPQIRIELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGFSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(70955..71695)
                     /gene="cmeE"
                     /locus_tag="ACJE1S_000070"
     CDS             complement(70955..71695)
                     /gene="cmeE"
                     /locus_tag="ACJE1S_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HGG0805653.1"
                     /translation="MKKILFLLLVFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNKAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVRLGDDFFYKIDQNGTELKGKISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            complement(71692..72966)
                     /gene="cmeD"
                     /locus_tag="ACJE1S_000071"
     CDS             complement(71692..72966)
                     /gene="cmeD"
                     /locus_tag="ACJE1S_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HGG0805654.1"
                     /translation="MFEKYLKSAIFLALYPLAMLASNLHEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREA
                     NLRALESREKLSLLDKEQNKNYLALNAITLYFNTLSLEKILLANQQKVSFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAL
                     FANLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            73093..74889
                     /gene="lepA"
                     /locus_tag="ACJE1S_000072"
     CDS             73093..74889
                     /gene="lepA"
                     /locus_tag="ACJE1S_000072"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HGG0805655.1"
                     /translation="MSVKNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMD
                     TMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLV
                     VDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAI
                     CVSAKTGVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSI
                     AKNDEVLVMSTDKKHVVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTI
                     TLVKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSL
                     ALGFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELIKIQNPSEL
                     PPVNKIDHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPL
                     NEIVMDFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQ
                     SKGRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRK
                     LLEKQKEGKKRMKAIGKVNLPQEAFLSVLKID"
     gene            74980..75624
                     /gene="mapA"
                     /locus_tag="ACJE1S_000073"
     CDS             74980..75624
                     /gene="mapA"
                     /locus_tag="ACJE1S_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein MapA"
                     /protein_id="HGG0805656.1"
                     /translation="MNKKILFFIALALFLNACASKQNTFTQVNQLSKASQCVPCESSS
                     GFEAKIKGLLYVSDIGIQCCANKRTLDTGVALKKVYLHRFYDLKEEQKVLNANGQKLF
                     VNLDFNAIFYVYLKQELEARGIIVLDDNKANSPYVTKIDLAFTGYSAKQDSLGLHSRL
                     VGVLSLSDINKNKKFTLRTKQDVQGFENLKDISFYTHLLIKQMANKAASIISEL"
     gene            75621..76196
                     /locus_tag="ACJE1S_000074"
     CDS             75621..76196
                     /locus_tag="ACJE1S_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HGG0805657.1"
                     /translation="MKCLNCGVFTLLCFCHHCAEELSEFSLGVRELEKDFKVYSFYKY
                     HEIKHLLHAKHKFYGYFVFHFLAKLSFFKFKNFFSVNEQINVIPLDDRVENLLYSHSA
                     ILAKYLKTEFIKPIFGALHAQNHLKYSGKSLKFRQDNKRKFKLLKKINNPVILVDDIV
                     SSGSSLLEAKQFLEKNKISVLFAVVLADAKV"
     gene            76236..78803
                     /gene="gyrA"
                     /locus_tag="ACJE1S_000075"
     CDS             76236..78803
                     /gene="gyrA"
                     /locus_tag="ACJE1S_000075"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HGG0805658.1"
                     /translation="MENIFNKDSDIELIDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMNDLGVGSRSAYKKSARIVGDVIGKYHPHGDIAVYDALVRMAQDFSMR
                     YPSIDGQGNFGSIDGDGAAAMRYTEARMTILAEELLRDIDKDTVDFVPNYDDSMSEPD
                     VLPARVPNLLLNGSSGIAVGMATNIPPHSLNELVDGLLYLLDHKDASLEDLMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKIRAKTHIEKKSNKDIIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESDREGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLIELLNLFLNHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSPDNTTARDSLVAKFGLTELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLDEILKSETLLENLIRDELKEIKSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQADEKIMAIIPTTDFDENKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVKAINLDENDELVTAIIVQRDENEETGLLDDDSLNDENTNSDENL
                     IESIKGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAVVIENDE
                     QEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTDKTKELISVVIVDESMDLMALT
                     SSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEELEDEISDENLGLNL"
     gene            78871..79392
                     /gene="flgP"
                     /locus_tag="ACJE1S_000076"
     CDS             78871..79392
                     /gene="flgP"
                     /locus_tag="ACJE1S_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HGG0805659.1"
                     /translation="MKKFYFMLIIAGIFAGCTASTNSTTAKNPNSPSTSAQASDIVVQ
                     KVDKDDVRDIIREEKMLAPDVSESELSFSAVGEGIAPLNTVSSAQALALAKRAAITDA
                     YRQLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNVEL
                     KIDADKWKELFAY"
     gene            79368..79817
                     /locus_tag="ACJE1S_000077"
     CDS             79368..79817
                     /locus_tag="ACJE1S_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805660.1"
                     /translation="MERIVCLLIFFSFKLIAQDEFIFWAELSNKNLILFHQSQNLSPA
                     MTRSENTISEFACEISYTDDDLKKLPRTELGMIDDDMSKAIKFDFLNAHKDELSDCFM
                     GARISVKDIVKTDLLKAQNETYVKILPLRFSVEFGERNALIYYLKKK"
     gene            79866..81164
                     /locus_tag="ACJE1S_000078"
     CDS             79866..81164
                     /locus_tag="ACJE1S_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HGG0805661.1"
                     /translation="MNLVIVEDDINMRKSLEIALGEYEEFQIKSYKSATEALKKIDSD
                     TDLIITDINMPGIDGLEFIKACENKYDFIIMTGNATLNRAIEAVRLGVKDFLTKPFDI
                     ETLVEAIKRAKVIREKTADKKIKKQEEKQENGFFSSSDKLEQVLSLSQKAAKTDASVM
                     LFGESGVGKEVFSRFIHQNSKRSQKPFVAINMAAIPSNLIESELFGFEKGAFTDANAT
                     KIGLFEMANNGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISATN
                     ANLQDKIDNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLENTCKEYELEMKK
                     ISQEAQKALLEYNFPGNIRELISIVQRACILSEGLEISEQDLFLEARSVKKDVKNLEK
                     ELLEQILEQCEFDKEKASNELGMSIENLNNKIKQYKIKEK"
     gene            81164..82195
                     /locus_tag="ACJE1S_000079"
     CDS             81164..82195
                     /locus_tag="ACJE1S_000079"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HGG0805662.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSAG
                     NQIEFRGKSYTIKELTEDVFRENPVDIAFFSAGGSVSEKYAKFAVEAGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKEWKKTGIIANPNCSTIQMVHILKPLNDAFDLKRVDVSTY
                     QAASGAGKEGMEELVRAMQSFFAFKLDEFEAQTFPHTLALNLIPQIDVFMDNGYTKEE
                     LKMINETQKILHKNLEISATCVRVPVLRSHSEAITMHFAKEVDVNKARDILQNAPSVV
                     VIDEPKDKKYPMPLMTSDTNETYVGRIRLDVTHKNILHLWCVADQIRVGAATNAVRIA
                     QKWLELENK"
     gene            82209..82715
                     /locus_tag="ACJE1S_000080"
     CDS             82209..82715
                     /locus_tag="ACJE1S_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HGG0805663.1"
                     /translation="MLEKIFESLLVKSRIVTILPVIFGLVGAFVLFFIASYDVLKVIL
                     YTYQYFFSAGIKIDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPTDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            82769..82969
                     /locus_tag="ACJE1S_000081"
     CDS             82769..82969
                     /locus_tag="ACJE1S_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HGG0805664.1"
                     /translation="MKKLFLILLAVINVLTFSYAAPLDEVFKDVEVSGVVRYRYETQR
                     VKKTDNKNKKHNVTNRTEITIK"
     gene            82979..83410
                     /locus_tag="ACJE1S_000082"
     CDS             82979..83410
                     /locus_tag="ACJE1S_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG0805665.1"
                     /translation="MFRYLTIFSIFVVALFGINLKSFFTYTFDANKQYDMVQAKDLYF
                     KNKCNTCHGDNAEKSVAGSRVLKDMSPEDIKAALVGYTLDGSTSANASQMAFYARNLS
                     HDDMDNIIAYIKGGNFAVDLQVKDLLEEEPPQKTKHNTFLK"
     gene            83446..84561
                     /locus_tag="ACJE1S_000083"
     CDS             83446..84561
                     /locus_tag="ACJE1S_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0805666.1"
                     /translation="MKKVTLVFSALALANCLYAKTINLGVVLPLTGPVAAYGQDVFNG
                     IELANKLNAKLDNGDEVKLIVIDTKGDKLETTSAVNRLIAQDKVIGIIGEATTPNTIQ
                     AISIVEDKKIPLIAPVASGDKLLEGKKYASRVCFSDSFQGDKFASYVTKELNLKNAVV
                     IIDQSNVYSLGLAKAFEKSLKENGGKVIKKLAISSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQAKQIGFDKLLAAGDGVNNQTFIDLGSTAVNGVVFTDSFDSSNPSTA
                     RGKTFINEYEKIKGNANLPAFSAMGADAYYVMLNAINACQNTLTSECINEKIHQTSNY
                     EGVGGIISIDASGNAIRPVVIKEIQDGKQVYKTLINP"
     gene            84571..85680
                     /locus_tag="ACJE1S_000084"
     CDS             84571..85680
                     /locus_tag="ACJE1S_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0805667.1"
                     /translation="MKKKIILAAALALSLQAKEVNLGVVLPLSGATAAYGQSALEGIK
                     LANEMQSTLANGDKINLVVLDTKGDKIESANAATRLVNQDKVLGLIGEMVTANTLQVM
                     RIAEENKVPLIAPAATGDKLLENKLYSSRVCFMDSFQGSSLAKYAFEKLNHKKAVIVV
                     DQSTDYSLGLAKAFEKEFKAKGGEILKTLRVNSGDKDFKAIATQIKILNPDFIFLPLY
                     YSEASLFVRQAKLIGLNTPMGSADGVADATFIKLAGNASEGYIFTDSFDANNPTTQLS
                     KDFIAKYAKENQSKEVPNFTAMGADAYFVMFNAMNACQNTLTSECINEKIHQTNNYEG
                     VSGVISIDKSGNATRSVVVKEIKNQKQTYKDTINP"
     gene            85688..86647
                     /locus_tag="ACJE1S_000085"
     CDS             85688..86647
                     /locus_tag="ACJE1S_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HGG0805668.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYIALLLINFFSPIINHLNQTFFGSDELGKYLVVIFAAALVASMIFSSIVGILI
                     DKIAYKPLRKAPRISLLITAIGISFFLQNLFNVIFTSTEQQFPAPPIFETLVSIGGVS
                     TTLGSLLVPLVTLVVMLGVLFILYKSKYGIAIRALAFDIQTVNLMGINANRIIAIVFA
                     LGSALAALAGIFWSSNYYSAYPTMGTLVGLKAFAAAVLGGIGSVVGAVLGGLIIGLTE
                     VMAVAFFPELSGFKDAFAFIFLVFILLFRPTGILGINFEKSRF"
     gene            86650..87690
                     /locus_tag="ACJE1S_000086"
     CDS             86650..87690
                     /locus_tag="ACJE1S_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HGG0805669.1"
                     /translation="MVKIKISALVYIVLAIAFIMLAPQFFDGYGIGILNQIAIYITLA
                     VSYNLINGVTGQFSLEPNGFIAVGAYAAALVLLSSEQKLDLFSLEDPNPIILALHTNS
                     FILALLVAGFSACVLSLILAFAVFRVRGDYLAIVTLGFGIIIQKLAINFPSWTNGSMG
                     LNGIPLLSNLYWTGGVAIISVILILNLVYSKFGRAMQAIRDDEDAASAMGVNTFWTKT
                     LAFGTSAFLEGVGGGLLVCLLASVSPEQFGFEFTFMLLIIIVLGGLGSTTGAILGAIL
                     IIGGREWLRFLDEMQIKIDFLGIDMGSMPGLRMVVFSLILILVMLFARRGIFGDRELN
                     SFFKRPSKKGLK"
     gene            87690..88460
                     /locus_tag="ACJE1S_000087"
     CDS             87690..88460
                     /locus_tag="ACJE1S_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0805670.1"
                     /translation="MILELKNITKKFGEVRAINETSFHIKEGEIFALIGPNGAGKTTL
                     FNIITGNYKPTSGEVFFQNKKINDLKPHKIVHLGIARTFQNIRLFSSMSVLENVMIGF
                     DKQMKYSVLEAFLHLGRFHRVEQEFKNKAYKLLEELGISEFADEKATSLSYGQQRKVE
                     IARAMATNPKLLLLDEPAAGMNSSESDELAELILKLRKDYKISVLLIEHDMKFVNRLC
                     DQVLVLDYGKTIFEGKISDAVNHKEVIAAYLGDFDASS"
     gene            88447..89142
                     /locus_tag="ACJE1S_000088"
     CDS             88447..89142
                     /locus_tag="ACJE1S_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0805671.1"
                     /translation="MLVVKNLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNAVKRTGEINFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAYN
                     NSENYEHLREQMYKLFPRLASKKHAMAGNLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGLIAMQGEAKKL
                     IGDDNIRKKYLGL"
     gene            89158..92418
                     /gene="ccsB"
                     /locus_tag="ACJE1S_000089"
     CDS             89158..92418
                     /gene="ccsB"
                     /locus_tag="ACJE1S_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HGG0805672.1"
                     /translation="MKNIIKSVGDLRISIVLFLLFALSCGLATFIESAYGTPTAWAMV
                     YDSFWFEYIQLLLGINLLFGMFRYKMFALKKMPLMIFHFSFLFILLGSAMTRYGGFEG
                     LLAIREHTQNALVESSKTSLRISTIKDGERYTSVNDRYIGNLPFANSFKLNLNMGDEK
                     AVLKYENLILDADYTYKEDNVSSPLLVLTISEKKSQGANLEFRSGEVQNINGINFAFM
                     NDDVAKPYIKIDKNLKLSSSENLSVFNMKKGENSTLKIGEKADAKDLRLYSLDNLNFV
                     VKFASLHGAQEIQGVNRPQDESFWLWFKSAWLEFARTIMISSFGEPQNWKASWLTNFK
                     DFAMSKDYQALELKGAHALKLQLDYKNESKEFYVFEYNKPTVVELAGQKFFISWALAY
                     EQLPFEIYLRDFVIDRYPGSMSPASYASEITVKNNEDNFDYRIFMNNVLDYKGYRFYQ
                     SSYDQDEKGTILSVNKDPGKIPTYIGYFLLCLGMFLNFLNPHSRFRTLARLINKDALK
                     HTASVLALFVALFGADKMLAQDLNISLEQNIPIVDKAHVKELKALIVQKSVDGRMIPF
                     DTLAREILEKIHKSADYKGQEASAIMLSMLINVDLWQNEAFILMPSNKNVREAIAEIL
                     EISPELKYVKYKDFFDANNRYKLQKYVENANRKNPNARGVFDKEIIYLDERANVVNLV
                     FSGELFKFIPIQNHDNNAWLAPFSAITTLKDEEGQFVFTLIKNYFSSVDSAFHDGNWT
                     RANEALGFIKQYQEKIGHEVMPNKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLIVLL
                     IKMVAPKLKISLIFKVIYILNILAFIVHTVGLGLRAYLADHAPWSNGYESMVYIAWAL
                     SLSGIFFSRKSPIALSLTSILAGIVLAVAHLSEMNPQITNLMPVLNSYWLSIHVSVIT
                     ASYGFLGLCSLLGIFTLLLMCFLKENNQYNQSILRNITEATRINEMSMIFGLCLLTVG
                     NFLGAIWANESWGRYWSWDPKETWALVSILVYAAILHIRMIPKYSNQFTFALWSMFAY
                     WVVIMTYFGVNYFLVGLHSYAAGEAAQIPSYVYWGVVIMIVLALLARRKREFVGKL"
     gene            92418..92873
                     /locus_tag="ACJE1S_000090"
     CDS             92418..92873
                     /locus_tag="ACJE1S_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805673.1"
                     /translation="MSHIFWVIICTSGALLLFLSLIAYLILSDNKKKNKKQKNTENTA
                     KARKFDNDLNKMIAAASDLKYSDRDLKELVKLFVQTHKLGSKTSKELDEKTKNKLEFV
                     SALAANPKASPQTVSFLNQELKKISASYKKEIDAYEQMGLAKRKIKEEK"
     gene            93039..93179
                     /locus_tag="ACJE1S_000091"
     CDS             93039..93179
                     /locus_tag="ACJE1S_000091"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805674.1"
                     /translation="MQDASRKYLVVLHTMINYSVESYGLFGDEREVGSFTSVGHKGVD
                     GG"
     gene            93249..93392
                     /locus_tag="ACJE1S_000092"
     CDS             93249..93392
                     /locus_tag="ACJE1S_000092"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805675.1"
                     /translation="MRFYKMLLALILSTNLANAYDTTIIYNEDKPIFKLDFYNKGENT
                     VFW"
     gene            93352..93738
                     /locus_tag="ACJE1S_000093"
     CDS             93352..93738
                     /locus_tag="ACJE1S_000093"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805676.1"
                     /translation="MIFTIKEKIRFFGETVASSYTLNEIQRNEIIRATQFRANIIGAS
                     TINSSPIPISVSTFDIPNANALSYDFFSNPIFNRVLQGESIDTIRQELIGVSEDFFTK
                     ASVEYLGHINMGKLDWYIAFSSYYPT"
     gene            93833..95818
                     /locus_tag="ACJE1S_000094"
     CDS             93833..95818
                     /locus_tag="ACJE1S_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
                     /protein_id="HGG0805677.1"
                     /translation="MGQCFNGFLNSFSDHLYDLNGVKAQIGMRIVKTQAEVEEAKLKG
                     ETVFLVKDDGVYINGSFSNASGNVYFKGENVAEVIKNAKLGYDGVNGIPINAWEGIIL
                     DMSHIELDNSLMSHQSWRNYNFYMEAELALLQDIGYNFDRKLYYGDSIYESNLLNWQS
                     DHGYYARKDGKWLIGEYNPTEYGVGLHIYGKNNIATQSHDILSSGVAASGIRIDGSNN
                     QLIIANDTKVYTLGDYSNALLIAYGKDHVIEHNGELKATGKEGIAINIDFGDNTLGNA
                     EEYRGSYIHQMSGNNQDDLAEYNLDGALVKSLNLNAASSTIGSLASIYIADNAYVNTI
                     NIAQWAKVEGDIISNWDPNNEKLANQYKDSFYTDLNFGSDSSLSRAAFNALDNTWSVK
                     ANVLGYDNFKMNVNENLNLQGSAFVYDLNNKAHFSLLGADGINPSLLYIKNNFTQDSN
                     AILTAGINANGQSLVYVGGNANLVGAFNFYMLKDFYKDKVVLDPDLISANQIQGAFNS
                     IVYDSSLDFSPTLNFIYDANTKELGVVRDYTPYIKNSSDISLAYALNSLAQNGKYEDI
                     ALLFKELDFATDAQTIAQGLNELNAKAYLDSAKISLDFQEELNKEALSEYANEWQSFV
                     TPFGTYQSSRANGDFDAYKGYGGGVKAKLLRDLIVSI"
     gene            95830..96510
                     /locus_tag="ACJE1S_000095"
     CDS             95830..96510
                     /locus_tag="ACJE1S_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HGG0805678.1"
                     /translation="MLNTNNIDIDDTLANTKTTGAYAGIFSKYDLEDFYLLGSFRMGY
                     EHTKLNRNVNIGAFSANYNSKFNSYLISEMVGIGKSFNHYGVSYGPLAYIEHSFLHHF
                     AINEENQNSTALNIDSKNFHALNSFMGFNVNYEKGMSDKAIVNFYFLGGWNHYFLDSL
                     KNNASFKDASLNKFYTKSKLSNQDSLYLQGEIDFTHNQSFFTRLMLSSDIKDNIDFST
                     KLEVGAKF"
     gene            complement(97016..97092)
                     /locus_tag="ACJE1S_000096"
     tRNA            complement(97016..97092)
                     /locus_tag="ACJE1S_000096"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(97056..97058),aa:Arg,seq:gcg)
     gene            complement(97147..97917)
                     /locus_tag="ACJE1S_000097"
     CDS             complement(97147..97917)
                     /locus_tag="ACJE1S_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HGG0805679.1"
                     /translation="MVCDENLSKFLANKNLNTLYMDFLGQKILILNSYSSKTKKANFS
                     VFGFEDDTIFKLENAQFKPFSLNDFLSTIRAILEDCKNENAYFERILERKENILLKGN
                     LIKNFFKKSFILKQKINKNLKNLSLLDEALNLLAGTSPHKKALKPIIFAVGVTLKNNK
                     EIITRLNELHLLMSAIKNEKMNQSLYFLSILSAIFLPLNLIVGFFGMNTNDLFLSNVK
                     HATWYVFALICFILLSGLIVYRKKRKKELEFEDKILNK"
     gene            complement(97904..99037)
                     /gene="tgt"
                     /locus_tag="ACJE1S_000098"
     CDS             complement(97904..99037)
                     /gene="tgt"
                     /locus_tag="ACJE1S_000098"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HGG0805680.1"
                     /translation="MEFKLKHKDNLARVCEITTAHSTFETPIFMPVGTVGAVKSLDAI
                     DLKEQLNAKIILANTYHMYLRPGSKIVKHFGGLHGFTKFDRSFLTDSGGFQAFSLSAN
                     SKHFQEGIEFKSHIDGSKHLFTPKSVLDTQYDLNSDIMMILDDLIALPATKERIKVSV
                     DRTIKWAKEAIDYHKQMQIQGLGLKQNIFGIIQGGTDYEERKRCALALNEMDFDGLAI
                     GGLSVGEENALMYETVENLNPFLDENRPRYLMGVGTPEDLVENIERGVDMFDCVMPTR
                     NARNGTFFTNFGKFNIKRAEFINDHESIDNECLCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLTLVAQAREAIKKSEFKKFKYEFYAKRLTNGMR"
     gene            99067..100467
                     /locus_tag="ACJE1S_000099"
     CDS             99067..100467
                     /locus_tag="ACJE1S_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HGG0805681.1"
                     /translation="MNHILIIIDGILAKHFLERLCFEKGLGYFFTIVCQNEENINLGA
                     NSEYIEFHHFDPTSTARLETLMNKSFKQAFIYMQDEFETKKTYEALRSLDANLEIEIM
                     DFWGLNINDVHTNLADARMTLSRRFMDFLPDIALTAYCVGLGVGEVMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLQPNDSILIVGDPAVLQSIFHNIRGKA
                     GQFPLPFGSNIFTLIDMKKMSEDTQERLLDTTLQLVKKSNAKKFFIRVLNPKLGALYD
                     KMKQLSDEQESIFFDFFNTDFANLNSFLENNDIGIILTDFKHFEQEKKTFFELKIPIL
                     KIGEGKFENIQNAVILSTNETELENNANVITDLSKQLDFDITLYYYNPNLQNTTDMEE
                     YFGSLSKLYDKNIQIISKNDENPILSLSYRADLLQFVSFEKELLEGEFSKSLSTNLNR
                     HYSKMRQNYQLFIPVE"
     gene            100635..101690
                     /gene="aroB"
                     /locus_tag="ACJE1S_000100"
     CDS             100635..101690
                     /gene="aroB"
                     /locus_tag="ACJE1S_000100"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HGG0805682.1"
                     /translation="MQINVDLKENAYKVYIDELDNLELDTKVFILSNPKISGLHLKTL
                     LSKIKAKELFIATIEDGEEYKNLLTLEKILNQMFNSKLNRKSILISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNAFGKNLIGTFYQPKAVYCESEFLR
                     TLGRRELAAGMAEFIKMAAMFDRDLLEFIEAIDKESFLNATCENEIFTQIISKSVELK
                     ARVVECDEKESGLRMLLNYGHTFAHVIENFTDYKQYLHGEAVAIGMNMANRLALKLGL
                     LSKEECERIEKILLQFNLPTHYKIENINEFYEAFFMDKKSANQKLNFILANSLGKGLI
                     KGDIAKEMILETLEEFQ"
     gene            101687..103258
                     /locus_tag="ACJE1S_000101"
     CDS             101687..103258
                     /locus_tag="ACJE1S_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HGG0805683.1"
                     /translation="MRKILLLLCFSLFAFGDINRTIINNINEKISNLDTVIGASIWDV
                     RYENFIKYQDINDELIILNLELKKIEDVHLQDELKRKIATLEEQLNVLKEYKELNFAH
                     SLSAPEDIETLSKLTNPFAIIGAFSHIKKLRGEKEEYAFKFNDFKNLVEKIREKNLEL
                     KELVNLESNIENIEALKASDKKLEEFDQALKFASVSYSVYEKKIDDEIARVSAEIKAQ
                     GLRAINIVIAIVIVVAIAFMLKLVAKKYIKDNERYYTATKIINFINLNIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIVFGGSFRVGDRVKVFQNDTTYVG
                     DIIDISFLRITLYEDITLETYSKNRRAGRIVFIPNNYVFTNLISNYTHHGMKTILDGI
                     DISVTFDSNIEKAQAIVEEVVNRLAKGYTELAKKTMKRLQNEYSIRNPKVEPRFFVFF
                     EHWGMRISAWYMTNSYAALILRSAISKEIIKEFNKHEDIKIAYPSQNLYLGNLNQAPF
                     ETHYNSMHFHTKDNN"
     gene            103255..104511
                     /gene="mtaB"
                     /locus_tag="ACJE1S_000102"
     CDS             103255..104511
                     /gene="mtaB"
                     /locus_tag="ACJE1S_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0061712 - tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HGG0805684.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIVNDEEKAQIIVVN
                     SCTVTNGADSGIKSYINSMQKKGVRVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGLKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEQALLRQVEILGANGYSEVVLTGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRL
                     GSLEPAQIDESFLEILDERWMERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVGHPGETEELWHEALKHFQEFPLTHIHAFIFSPRNNTHSATMKDTING
                     AVAKERLNTLKVIIENNNYEFRKRVKTPLEILVENQKDGFFEGYDQFFNKIKIKSSKD
                     IAKEWLKLERYEVQEKHNFADLEGKK"
     gene            104508..106112
                     /locus_tag="ACJE1S_000103"
     CDS             104508..106112
                     /locus_tag="ACJE1S_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0805685.1"
                     /translation="MKNKKIILISFLILCLLFGILYFKNEPKYIDENLYQSLLSQNLI
                     EKAVIDKDEIWLKAKGESYVIVKDGVDIKTLLSKVPVEIKKDSTLWVFFVIFVFLIAL
                     LLSFVYFARKKELAKYPISSKTQTQTSTTNLESSNIKPVISNITFNDVAGVSEVKMEL
                     SELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFV
                     EIYVGMGAKRVRELFSRAKMMAPSIIFIDEIDAVGKARGEMSNVERDSTLNQLLTQMD
                     GFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKGKNNN
                     IDLNKIAKASVGFSGAGLETLVNEAAINALRRNSSLVEESDFYAVLNKVLLGKKKNLS
                     FNDEEKGIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHAIRSKSELINRIKVYL
                     AGSRAMSLIYNESYTNSQNDFLKVKELLDYMINFGMLEEPNLNEIKRELDEFLFPLKE
                     KISTLAKILLEKEKIEYNDVKEVVQV"
     gene            complement(106167..106583)
                     /locus_tag="ACJE1S_000104"
     CDS             complement(106167..106583)
                     /locus_tag="ACJE1S_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HGG0805686.1"
                     /translation="MKIKFYGIIAILSTFLNADIIISPDELPSISKEFLKNNFQAPIG
                     IVQRDKHAYEVYLSDGTELEFESDGSWKEIESKVFPFDLNFLPPNLTNIIQNKFPNTK
                     AREIERKINYYKIKLTNNIEVHIDFNGTILYTEYDD"
     gene            106683..107201
                     /locus_tag="ACJE1S_000105"
     CDS             106683..107201
                     /locus_tag="ACJE1S_000105"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HGG0805687.1"
                     /translation="MVVILLILLNILFYFTIPYGYYNLLGLNILFFKGAYWQILSSMF
                     MHGNLTHLILNMIVLFQFGRILESYLGALRFFLLYIIGGLMCSLLSAFYVYFSFYYFG
                     GMINLVGASGAICVLMGYYAFLDKSSTKGLIVAILLMSFAPLLMGVNVAWYGHIFGFI
                     CGYFLGKLRRKI"
     gene            107198..107707
                     /locus_tag="ACJE1S_000106"
     CDS             107198..107707
                     /locus_tag="ACJE1S_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HGG0805688.1"
                     /translation="MKKIYILRHAKAVKDEEVQDFDRKLNKRGKEDLEKLFYNLKTYE
                     IKFDFILSSPSKRTAKTAKKIAEFYNFDKEKIQFIDELYLANLSKIYQILQTIDKKYN
                     EVLLVGHNPTLMELGEFLGSLCLTSFPTSSMLCLEFDIEDFKDLKAHSGKVIFFEHVR
                     KLKEEKELD"
     gene            complement(107708..109573)
                     /gene="rpoD"
                     /locus_tag="ACJE1S_000107"
     CDS             complement(107708..109573)
                     /gene="rpoD"
                     /locus_tag="ACJE1S_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HGG0805689.1"
                     /translation="MNAKTQDMELEELFKENEKDYITYEKLVKYFSKQPNSATAKKVQ
                     TLMKKYKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYREPLI
                     NRERRVKELFKSFDDEEKNDDKLDELEDEDEENDEELENEEETPKKTSKKEDERTLKV
                     IEKFKALEKAKKDWLKVSKDKESGDEILDKLGIAFKKNILKEKLMDLGPTSKLISEIV
                     KSMETALKSDEEFDKELKRLEYRLPMFSEELKNRHANILKDITKLSKEEITERALETT
                     MVSTYMEIKKLFQTKEASEKSFDLEKERLKEILEQIKRGKKISDEAKTRMAKSNLRLV
                     VSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIAD
                     QARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITKE
                     PISLEAPIGSEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIRM
                     RFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(109648..>110521)
                     /locus_tag="ACJE1S_000108"
     CDS             complement(109648..>110521)
                     /locus_tag="ACJE1S_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HGG0805690.1"
                     /translation="KDMEIFLDLLNTQSPTNTANNFSITQPNVSIIIKNLEQDLGGAL
                     FERLGKKLLPTPKALYLGKIWLKLVQDYYKSLEELNDENTLLGEIKIAATQSIAEHFL
                     APILFDFKSKFSNVKIHFQTQNSKECLNLLKNGDIEFAIVEAELNPTLIDHEGLKMEF
                     WQKDELVVASSNKNLSQKEFYIDELLKQKWILRETGSGLRDKFLNEIGDVSKKLKFFL
                     ELDRMSAIKELVIQKNAISIFSKKSIEKELKNSILYEVKLKNINLWRNFYILKRKNYN
                     FNRALEKFEKIFKQ"
BASE COUNT        38505 a        14582 c        19991 g        37443 t
ORIGIN      
        1 gtatttaata taattttttg cacaaagata aaaatttttt aacttttatc ttgcttgtta
       61 aaataatttt taatcttttg cacaaatttt tctttaggtt tgattacacc actttccttg
      121 ccatttgtgg catggtatac actaactcca tatttgcttg cataaaattg catgagtagt
      181 ttttgtagtt tgtattcgct agaataatta aaccaagcat tattacttat agctataata
      241 atttttgaat ttttataatt ttgttctttt gtagcttcgt aacaaatagc attggtaatg
      301 atttgatcat tgagtttgta tttgctttgt aatggtcctt gatcaaattc tgctatattg
      361 ggtaagaagt atttttgtat tgtttttttg aaaaatggaa tttcttcccc aaaaggtact
      421 aaaaaatgtt tattgagtat atagctattg cctcctttaa aaatatatgt actattgtaa
      481 gttttaccct cttgtatgtt aaatgctcca gttatgatga taatttggta tgatagctct
      541 tttagcattt tttcgtataa ggtgtttttg agattaaatg caaaagcggt ttctggcaag
      601 atgacgagct cttttttttc attgatggct tgaataattt ctttgattag attgtctgaa
      661 tttacagata cattttcttg aaggaatttt tgatcttgag atatatctgt ggagataagc
      721 ttataggata gatttagctc ttctgatttt ttttcatcgt attgaaagcc tataaaaaat
      781 ataattaaga gaatagcaat tttataatat cttgaaatat aattttcatg aataatatat
      841 gctagtaaaa aaatacaaat aataccacga taacttgggt caaaaaaacc atatacagta
      901 taaactcccc aattaagcca atcaaagcct aaaggatgaa taaagcttaa acaaaaaatt
      961 ccgcaaaggc gtaaaaaatc gaatttaaat aaataacaaa ttctaaagag tattccataa
     1021 actataccta taaggataat aactataggt actaaataat ttaagtcaaa ataaatcgaa
     1081 gaaagtccta tccaccaaaa ccaaagtatc cctacaaaaa atcctatcca aaaatattgc
     1141 ttaggacttt tgctttttaa aagcaagact aaaccccaaa ttgcaagaaa tgaactgatc
     1201 gcttgggtaa aaatattttc aaaaaaagat aaataaatac aatttgaaag caaaaatgct
     1261 ataaaaaaga cttttattat tttaaaaatg gtagaattag tgtttaattt ttttggaata
     1321 aaggaaaaat atggcagaaa attcaatttt aacttcattg ttacctcttg ttgtgctatt
     1381 tgcaattttt tattttttgg ttataagacc acaacaaaaa caagcaaaag cacataaaca
     1441 aatgcttgag tctttgcaaa aaggagataa aatcatcact aatggcggac ttatttgtga
     1501 agtcgtaaaa ccagaggacg attttatcaa agttaagctt aatgaagata atgttactgc
     1561 aaaaatttca agagaattta tagcaaagaa aattgatgcg taattctaaa atcacttatc
     1621 gattggttgt ttttattgcg gtatttattt ttggagttgt tttttcactc ccttcttttt
     1681 tgcaatccga gcgaggagtg aaaatcaatt tagggcttga tttacaaggc ggactttata
     1741 tgcttttggg tgtagataat caagaggctg taaaatctaa aatcaaatcc gtcgcttctt
     1801 ctttgagtta ttcttttaac aaagagaata ttttaaacga tggattaaat atccatgatg
     1861 atagtttgga ttttacttta ttagataatg cagatatagt taagactgag aatttgctta
     1921 aggaaattaa tggacttaat gtgcaaagag aagatatgca ttatacaatt tcttttacct
     1981 cagaagaggt taaaagtata gagaattttg ctcttttgca agcagttgag actattagaa
     2041 atcgtttgga tcaatttggc ttagcagaac caacggttgc aaaacaaggc gaagataaaa
     2101 tcttagtcga attggcagga attaaaacca aagaggatga actaagggct aaagagcgca
     2161 ttactaaagc agctcatttg caactcatgg aagtggatga ttctaaaatg agtcaagctt
     2221 ctaatatgag tgatgctgaa gcggcaagct atgggcttgt tttagttcct gattctagaa
     2281 atccaaattt aaaatatcct ttaaaaagca ttcctatttt agatggttct atgcttacag
     2341 atgctagagt agggcttagt gatacgagta attatcctgt tattaatttt actttaaatg
     2401 ctgaaggttc taagaaattt gctgattata caggagcaaa tgttggaaag cgtttggcta
     2461 tcgtgcttga taataaagta tattctgctc catcgattaa tgaacgcata ggtggtggaa
     2521 gtggtcaaat cagcggggct tttactcaag aagaagcacg agatgtggct gtggctttaa
     2581 gaagtggggc tttactggcg ccagttaaac ttttagagca aagaagtata ggtccatctt
     2641 tgggtgctga tagtattaaa atgagtatga tagctcttat aggtgcttcg atttttatcg
     2701 tggtatttat ggtgctttat tatggtatgg caggaatttt tgcaaatatt gcaatgctcg
     2761 ttaatgtttt ggttgttgtg gctgtaatgg caatgtttgg tgcaactttg actttaccag
     2821 gtatggcagg acttgtttta actgtaggta tggctgttga tgccaatgtt atcattaatg
     2881 agcgtatcag agagcttttg cgcgagggtg caaatatcaa agcaagtata gagcaaggtt
     2941 ataaaaatgc tatgagcgcg ataatagatt ctaatatcac ttctcttgta acctctatag
     3001 cactttatgc ttatggaaca ggtgctgtta aaggatttgc agtgacttta ggaattggta
     3061 ttgttgtttc tatgattact gctatttggg gaacgcatgg aatgtttgat tattctatgc
     3121 gccgtattga aaaaagtaat aatacaagat tttggtttgg ttataggaga aaataatgca
     3181 gttttttagc gaaaagaaaa tttatgattt tatgagaatg cgttttgctg caatttctct
     3241 ttctatcgtt ttattttttg ggtctattta tttgctttgg gataggggtt tgcaatttgg
     3301 tattgacttt agtggaggta ctttaatcca gcttaaatac gatacagcag ctcccattcc
     3361 tcaaattcgt gaaatcttag aaaaacaagg cagttttcaa aatttatccg taactgaatt
     3421 tggaagcaaa gaagagatta ctatccgttt tttaggaagc aatgatagct taggtagtga
     3481 tataggagag catattagca cccttttaaa agatacgggc aaatttgaag tgcgtcgcgc
     3541 ggatgttgtg ggtccaaaag tgggcgatga gcttagaaat aaaggtatta tggctatcat
     3601 tgtatcctta gtagcgattt taatttatat cgcaatacgc tttgaatggc gttttgcatt
     3661 agcggcaatt attagcgaaa ttcacgatgt tgtgattact ttaggggcga tttcattgtt
     3721 taaaatcgat gtaaatttag ataccttggc tgcggtttta acagtgcttg gatattcttt
     3781 aaatgataca atcatcattt ttgatagaat tagagaggga attaagacga gtaaaaaaag
     3841 cgagcttgct cctattatta acgaaagtgt ttcagcaacc ctatctagaa cggtattaac
     3901 ttcaggtctt actttggcca ctgttgtcat actttatttt tttggcggag agatgataca
     3961 aggattttct ttggctttga tagtgggtat tgttgtagga actttaagtt ctatttttgt
     4021 agctagtccg actttacttt ggtttaaatt cagtgttatt gattttagaa ataaagagct
     4081 tgaaaaactt aaaagaaagc aagaaaaaga acgcaatcgt gcaatgtatg aaaaaggaac
     4141 ggtttaaagg gaatattatg gcttatgatg caaatttaat agaaaaaaga tggcaagaaa
     4201 tttgggacaa aaatgagtat tttgaaccca aagatgattt aaccctacct aaaaaatata
     4261 ttttatctat gtttccttat ccaagtggtc gtatacatat gggacatgtg agaaattata
     4321 gtataggtga cgctattgct agatattatc gcaagatagg ttataatgtt ttacatccta
     4381 tcggttttga tagttttggt atgcccgctg aaaatgcagc tattaagcac aaaattcatc
     4441 caaaatcttg gacttatgag aatatagcct atatgaaaaa tgaacttttt tctttagggt
     4501 tttctttttc aaaaaaaaga atgcttgcaa cctctgatcc gctttataca aaatttgaac
     4561 aagaattttt tatcaaaatg tatgaaaaag gtttgattta taccaaagaa gcgaatgtaa
     4621 attggtgcga gcaagatcaa accgttttgg caaatgagca agtagaagat ggaaagtgtt
     4681 ggcgttgtgg acatgaagtg gttcaaaaaa agatgccagg gtattatgta aaaattacag
     4741 cctatgcaga ggaactttta agcgaacttg aaaatttaaa agataagtgg ccttctcagg
     4801 ttttaaccat gcaagaaaat tggataggta aaagtgaagg tttggaattt tctttaaatt
     4861 tagacaaaga aagcttggaa aaaacaaaga cacaatcttt tgaagttttt actactcgcg
     4921 cagatactat ttatggtatt tcttatgtag ctttagcacc tgaacataaa attgtgcaaa
     4981 atttaataca agcaaattgt ttagatgatg aaaaagtaga acaaattaaa aatatgcaaa
     5041 aacaaagcgc tagggaaaga caaatagctg ataaagaagg gtgtttttta ggaatttacg
     5101 ctatccatcc tttgactcaa gaaaaactcc ctgtttgggt ggcaaatttt gttttagctg
     5161 attatggtag tggggctgta atggctgttc cagctcacga tgagagagat tttgaatttg
     5221 ctaataaata caaacttgaa atcaagcaag tgattgagtg tgaagataca cagcttcctc
     5281 atgttcaaaa aacaggaaag cttatccaaa gtggtgaatt taatgggttt gattgcaatg
     5341 aagtaagagc gagaattatt tcaaaatttg aagatgaaaa gttaggaaaa agggttatta
     5401 attttaaaat tcgcgactgg ggagtttctc gccaaagata ctggggtgct cctataccta
     5461 tggtaaaatg caaaaattgt gggattgtgc ctcaaaaaat tgagaattta cctattacct
     5521 tgcctgaaga tattcaaatc acaggagagg gcaatccgct tgaaaaacat cctatttgga
     5581 aaaattgtac ttgtccaaaa tgtggacaag aagcacaaaa agaaagcgat actttggata
     5641 ctttttttga aagttcatgg tattttgcac gctttgcaag tgatgaaaaa acatggcaag
     5701 aaaaggcttt ggataaagaa agtgtgaagt attggatgaa tgttgatcaa tatataggtg
     5761 gcatagagca tgccatttta catttgcttt atgcaagatt ttttcaaaaa gttttaaaag
     5821 atttaggcta tttagaggat aatgagcctt ttgctagact tttaactcaa ggtatggttt
     5881 taaaagatgg tgccaaaatg tctaaatcca aaggaaatgt agtcgatcct gatgatatta
     5941 tcaataaata cggagccgat actgcaagac tttttatcct ttttgctgca cctcctgcta
     6001 aagaacttga atggaatgat gatgcggttg agggggctta taggtttatt tgtaggcttt
     6061 atgatagggc tcaaaatgta agagctgggg agcttttaga atttaagcat gatgatttaa
     6121 ataaggaaga aaaatacgct agattgaaag tgtatgaagc tttgaaaaaa tcttttgaag
     6181 tttatactca aagctttgct tttaataccc taatcgctgc ttgtatggaa gcgcttaatg
     6241 ctttagctcc ttgtaaaaat gaagctttag aacaggaagc tttttatatt atcttaaata
     6301 ttttagaacc tattattcct catgtgtgct ttgaattaag tgataagctt tttaaatgtg
     6361 agaattttaa ggttttaaat ttaaaagaag aagtttttgt aaaagatagt ttaaatttag
     6421 gcatcagcgt aaatggcaaa aagcgtggag aaattgaagt ttcaagctcg gcaagtcaag
     6481 atgaaatttt agagctagca aagcaaaaag tttcaaaatg gctagagggt aaaaacatag
     6541 ttaaagagat ttatgtagag ggaaaactgg taaatttggt gataaaatga aaggaatttt
     6601 attttttatc gtagctttgt ttttaggggc gtgtggttat gttccaactt caaaagtagc
     6661 ggataatatt tttgatgata aagtatatgt gaatgtggaa ttaagccttc aagatcctag
     6721 aaacagtatt ttcgtagccg atacgcttaa agagatggtt atttcaaaat tgggacgaag
     6781 attggcttta aaacatgagg cagatgatgt gatcaatgtt aggatgaata atcttgaatt
     6841 tatcccttta atctatgatc aaaatggtta tgttgtaagc tacaaagcca aacttaatct
     6901 agaatttaaa gtggtattta aggatggtag cgtcgaacat tttaatacaa gtggaagcta
     6961 taattttgat atatcaccta acagtattat cagtgataca gcgcgctacg aagctatacg
     7021 ctcagcttct agcgaagctt ttgatgaatt tatttcagta atagctatca agggacaaaa
     7081 gcgtgctgcc caatattaat gaaatagcaa aagaaacttt aatcacactt aaggatagaa
     7141 agcttcgtcc tacccctgaa aattatacag aaatttttga agagctttct aaaaaatatg
     7201 gtttaataag ctcaaataaa gccaagcttg aaaaatataa agctttgctt ttaccaaact
     7261 atcaacaaga gttaaattct aaatccatcc gtactttaga agaattaata agctttttaa
     7321 tctccgcatt aaatagacaa aatggaaagc aatttagtga atttttcgat tttttggcta
     7381 ccttatctaa aagtttgcaa gtaagtaaag ataaaaaaat cagagacttg gctaaaatta
     7441 cttctattag aatttcaaaa actatggaca gcgaaagtat ttatttgctt tctaaaaaat
     7501 ggaaagaatt tgaaaaaaat tataacgaaa atgatttaga aggcggatta agaagatatg
     7561 gcatcgcaaa atatgatgat tttgataccg tggttaaaaa acttttaaat aagttagaag
     7621 aaagaagttt agaagttttt gctgaacttt tggcttcttg tttgaatcca tctttggttg
     7681 aggatcttaa aattcatggt tttgcacaaa atttacttca aaaacccttt cttttaagtg
     7741 aaagcggttt taaaaatgaa cttttagaat ttgtcaatcg tcgtgtgatg gttgataata
     7801 tgtatgtgca aaaaaattta aattttttta atgataactt gaaaaagatt tatgaacttt
     7861 ttatgctgtt aaacaagtcc aatgagcaaa atatggattt tataaatacc ttaaaacccg
     7921 ataaacaagg ggaaataaaa cttagttttg aacttttaaa acaaaaattt atacaactta
     7981 atgagaggat taattcttta aatgcacaaa ttgaatttac gcaaaattta gaagagcgtg
     8041 aatcttggag tgttttaaaa gagcttgaga gattggatga aaattacaat aaatataaag
     8101 ttaattattc tttagcatta ttttctataa aaaattatcg ttttattatg gaaaggtatg
     8161 gggtaggtag cttaaatgaa atttttgtgc gttttaaaaa aattttaaaa gataattgct
     8221 ctgaatttga tgagctttgg atgatagatg aaaagagtta tcttattatt tcacctggaa
     8281 gaaataaaga aaaagtggca cagcttgtcc gagaaaattt aaagactatt gaaaattttc
     8341 gttttattta taagcaagat attattactc caaaaattat cacagcttat ttggataagc
     8401 aaagtaagcc ccatgctaat attttagaag aattaatgaa tcaaatttca aatttagatg
     8461 aaagaaacaa tgcaaaagat cagtaaggtt gatgaatttt tagtacaaaa aagtacaaat
     8521 tatgacaaga tcgatcgttt tgttatgttt agaatgtatg aaaaatataa aacaaatttt
     8581 tcgattaaac ccattgtgca tattatagga accaatggaa aaggaagtac gggtagattt
     8641 ttaacccagc ttttagaagg cttgggtttt aaagtggggc attataccag tccgcatatt
     8701 tttgaatttc gtgagcgctt ttataaaaat ggagatatta ttagcgaaaa tgatttagag
     8761 ctcgcgcatg aaaatttgtt agatattttt aaggataatt taaaaaaact tagctatttt
     8821 gaatatgcta cttttttagc agtcgagctt tttaaagatt gtgattatgc gatttttgaa
     8881 gcaggagttg ggggtgaata tgatgcaact tctgtttttg ataaaagctt gagtattttt
     8941 acaaaggtgg gatttgatca tactcaaatt ttaggagata gtttagaaaa gattgctaga
     9001 acaaaattta aagttatggc aaaacaagct ttgatttcaa gcgagcaaga tgaaagagtt
     9061 ttgcaaatgg ctcaaaaaat agcattttta aaaaatacaa aattatattt ttcatggcag
     9121 ttaaaggatg aaaatttaat gcaattaaat gagtatgttc aaaaatacga tttgcctgaa
     9181 tttttaagac acaatttaat tttagcctta aatgcattag aaatattact ttctaaagaa
     9241 aaacttagtc aagctttgtt aaaattagga aaattaaatt taaagggacg ctgtgagcaa
     9301 attgcgcccc atttgtatgt ggatgtgggt cataatgtta tggctgctag cgccctgtgt
     9361 aaaaaattta gtggcgaaaa gcttgtttta atctacaatt cttatcttga taaagatatt
     9421 tttgagattt taaaaacatt aaagcctatt attgatacaa taaaaatata taaatatgta
     9481 agtttagaaa gaagattggc taatgataaa atttatcaag ttgccaatgc tttaaatctt
     9541 aagtgtgaag aatttgtttc tttggatgaa aagaaaaaaa ctttagtttt tggttctttc
     9601 gctttagtcg aaagtttttt aaaggagtgg agtgataaaa aataaattta ccatcactat
     9661 tacagatatt aatggttcaa ggcattttta tttaaatcag atcattaaaa aaatcgttct
     9721 ttatgtagta gcttttatat ttttgttttt aatttttagc ggtttttata ttaaatatct
     9781 tgatagcaaa ctgagtgata ttagtactaa aagagaagag cttttagcaa aaagcaagga
     9841 attagaactt gctaatgcgc aaatgcaaaa aaatgttgaa gaaaaagcaa agcaatatgc
     9901 agctatagaa gataagattg cttcttttga agaagctttg ggcttagaag ctgaaaataa
     9961 tcttactatt acagataggc ttgataattt aaagcttaca aatgagcagc aaattgggat
    10021 tttaggacaa attcctaatg gatggcctat tgaaaataaa ggcgttacgg gaaattttgg
    10081 atggagggaa caccctcttt taaaaagaag agaatttcat ccaggtattg atttaagagc
    10141 agcgataggt acgcctatat atgcacctgc tagtggggtg gttgagtttt caggatatag
    10201 tgataatggt tatgggtata atgtgatttt gctacataat tttggcttta aaactgtttt
    10261 tgctcatatg gtgagaaaag atgttgttaa agcaggccag tttgtcaata aggggcaact
    10321 gataggctat actggcaaca caggactttc aacaggtccg catttgcact atgaagtaag
    10381 gtttattaat aaaaccttag aacctttata ttttttaaat ttagaaagaa aaaatatgaa
    10441 tgagtttttt aatcaagaaa ggagagttcc atggcaatct ttaataaaag cggtaacggc
    10501 acagcactta gctccagttc cgaaacaaca gtaatttcat caggtgctag aatagagggt
    10561 aaattttatt ttgcttctat gcttcatgtg gatggagagc ttaatggtat agtgcattct
    10621 gaaagcatag tagttatagg aaaaaatggg aatttaaaag gtgagcttaa ggctgataag
    10681 atagttgtta atggctgctt tgaaggcgat ttggaggcag atagtcttga aattttagca
    10741 ggtggcgtgg ttagcgggaa tatcagcatt aaagacttag ctatagaaaa tggcggtcgt
    10801 tttaacggga ctagtaaaat aaagcaagaa gagcctgtaa ggttgttaga gaatagctca
    10861 gaataatgca agcaaatttt tttgagtatt tacaagattc aaatatagca caattagtgc
    10921 tttgcgaaga tgataaagaa tcttttttgc tttctcaagt tgctcttttt aaggatctaa
    10981 aaacctttgt tttacctgat tttagagctg aattcggaga tgatttaagg gctttttcca
    11041 aggagctttt tgagctttgc aaggttttaa atgcttatca caaggaaaaa gatactaaaa
    11101 ttcttatttc ccctttgtct accatactta aaaaattacc cggtcaaaaa catttaaaaa
    11161 attacaaact ttctaagaaa aatgttttta atttaagtga atttaaaaat gagctcaaca
    11221 agcttggata tgaatttgtg gatatggttc aagataaggg tgaggtaagt atacgcggag
    11281 agattattga tatattttgt atcaatgaag aattacctac tagggttttg ctttttggag
    11341 atgagttgga aagcattaga aaatttgatc ctatgaatca aaaatcattt cccaaagaat
    11401 atgaagaact tgaaatttgt ccttttttga catatttttc tgaggaaaat tatgaaaatt
    11461 ttaaagacaa attagaaaat ttcaatagcg atgttttgat taatgatatt aattctttag
    11521 gattttggtg tattgatgat ttttgtgatt atttagaact tgattttata agtatcaaaa
    11581 aattcaatca agaagaatgg gataaagatc ttagcaaaat caatgctaaa attatacccc
    11641 aagcctctgt ttataaggat ttaaaaagtt cttacaataa agacttcttt tctttgcaac
    11701 aaaataaaaa aattacgatt ttggctaaaa atgaagcttt gtttaaggct ttagagcttg
    11761 aaaatacaca aaatatttct tttcaaaaaa gcgatttgat ccttaattta attagcaatc
    11821 aagaacttat catctcatta aatcataaag aaaaacaaaa atataagcgt aaagcaaatt
    11881 tgattataga tgagttaaaa attggtgatt ttatcgttca tgaggattat ggtgtgggta
    11941 aattcttagg tcttgaaatg attagcatta gtggagctaa gaaagaattt gttgccattg
    12001 aatatcaaaa tagcgataaa cttcttttac cggttgaaaa tctttatatg atagataagt
    12061 atttaggagc tagtggaggc ataccgcttt tagatcgctt gggaaaaatg acttttatca
    12121 ggctaaaaga aaggctaaaa accaagcttt tggctattgc ttctgagatt gttattatgg
    12181 cggctaaaag agctttaatt aaaccaaaag aaatcaagat agattatgca gatcaagctt
    12241 attttgtttc aaaagctgga ttttcttata cacaagatca aaataaggct tgtgaagaaa
    12301 ttttaaacga ttttgaaaac ggcaaagtga tggatagact tttaagcggt gatgtgggtt
    12361 ttggtaaaac cgaagttgcg atgaatgcta tttatcccgt ggtaaaaagc ggtttttgtg
    12421 cttttttctt tgcgcctacc acgcttttat ctcatcagca ttataagagt ttaaaaaagc
    12481 gttttgagcc ttttggcatt gaagttttta aactggatcg ctttacaagc actaaagaga
    12541 aaaaaacttt aatgttaaat ttagaacaaa acaaagcctg cgtggtgatt ggcacccacg
    12601 cacttttaaa tgtagaatgt gaaaatttag cgcttgttat cattgatgag gagcataaat
    12661 ttggagtaaa acaaaaagaa aaattaaaag aattaaccca aaattctcat cttttatcta
    12721 tgtctgctac tcctatacca aggagtttaa atcaagcttt aagctctata aaatcttata
    12781 gtgttttaca aacccctcca gaagataggc ttgatgttag aacctttgtg aaagaaaatg
    12841 atgatgcgct tttaaaagag gctataacaa gagaattaag acgcggcgga caaatttttt
    12901 atatacacaa tcatattgca agtatagagc aatgtaaaaa acatttactt gatttattta
    12961 aaaatttaag gattttgatt ttgcattcta aaattgatgc gaagattcaa gaagaagaaa
    13021 tgcttaaatt tgaaaacaaa gaatacgatt tacttttaag cacttctatt gttgaaagcg
    13081 gtattgatct gcctaatgca aatactatga tagtcgaaag aagtgataga tttggaatgg
    13141 ctgatttgca ccaattacgc ggccgtgtag gcaggagtga taggcagggg tattgttatt
    13201 ttttagttga aaataaagaa gaacttactc aagatgcact taagcgtctt gtttctttag
    13261 agagtaattc ttatttagga gcaggttcag ttttagctta tcatgatctt gaaattcgcg
    13321 gaggtggaaa tttgctaggt atcgatcaaa gcggacacat agagcaaatt ggacttagct
    13381 tgtatcttaa aatgctagaa gatgagttaa atgcacttac taaaaaagaa agctttgaag
    13441 agaaaaaaat agacttaaaa cttaccatca atgctttttt aaattcagaa cttatcaatg
    13501 aagatcgttt aagattggag ctttatcgta gacttagtaa atgtaaaaat atagatgaag
    13561 tctatgaaat tgaaggtgag atagaggatc gctttgggaa attagatctt tatacaaagc
    13621 aatttttaat gctgattata attaaaattt tagctttggg gaaatttaaa accataagta
    13681 attttgagca aaatatacaa tttgtaaaga tcaatgatga aaaagagttt attaaagcaa
    13741 gaagcaaaga tgatgatgat attatagaag cagttttaac gcatttaagg aaagataaat
    13801 aaatgattga ctgggataaa acttatgcgg caatttatag atctagaaaa gattatttaa
    13861 aacccattat agatcttgat aatattggct taaatgattt attgggcatg gaagaacaaa
    13921 aaaatgtcct ttatcaaaat actttaaatt ttatccataa taaaggagca aatcacgcac
    13981 ttttatgggg tgctaagggt acgggtaaat caagcttgat taaggctatt tttaatgaat
    14041 ttaaagacaa aggcttaagg cttgtagagt tagctaaaga tgatttattt gctttagttg
    14101 atattatcga tgagttaaga gaacagcctt ttaaatttat attattttgt gatgattttt
    14161 cctttgaaaa aaacgatgat agctataaat ttttaaagcc tttactagag ggtagtatag
    14221 aagcacctcc gcaaaatatt attatttatg cgagttctaa tagacgccat ttattaagtg
    14281 aaagtatgag tgataatcaa ggagttcaag ttgctcatac agagcttcat gcaagcgatg
    14341 cggctgagga gagattgagt ttaagcgata gatttggcct ttggcttagt ttttatcaag
    14401 gaaatttaaa cgagtattta aagcttgttg atttttattt taaagatata aaatgcgata
    14461 aagagctttt gcataaaaaa gcaaaagaat ttgcaaattt aagagcaagt agaagtggaa
    14521 gaactgcaaa gcaattttat ttagccttta aggagagtat tgaatgaatg gagctgatat
    14581 ttttaaaaaa cttcttgctt gcaatttgga ttttaaagaa tttgattggc ttgagaatca
    14641 aggcttgagc gattttgagc ttttaatttc tgtgatttta acccaaaata caaaatggga
    14701 taatgtctta aaggcgttaa ataacttaaa aaatgcgcga atttcaagct tagagcagct
    14761 ttcaaattta tccaatctag agcttgctac tctgataaaa ccaagtggat tttacaatac
    14821 caaagctaaa cgcttaaaag agttagcaaa taagatttta gatacttata gtaatataga
    14881 aaattttaag aaaaatgtag atcgagaatg gcttttaaat actaaaggtt taggctttga
    14941 aagcgtggat agcattttaa attatctttg caaaagagaa attttggttg tggatagcta
    15001 tacgcaaaga ttggctacac atttgggtta tgaatttgaa aattatgaag aattgagaga
    15061 attttttgaa agcggcatag aaaacgagca agaaaatttg tgtcaaattt tagaaaaaaa
    15121 atacgagctt tttgaacttt atcaaatttt ccatgctgcg attattgctt ttggaaaagt
    15181 tgccttcaag ggagtaaaat tgactttaga gggtgaaaat ttgattcaaa atttaaagga
    15241 agaataatga aagcaaaagg aagtgattta attcctgtat tgagtatagc tggaagtgat
    15301 tgtagtggtg gggctggcat acaagctgat cttaaaactt ttagtgctca caatcttttt
    15361 ggtatgagtg ttgttttgag tgtggtagct gaaaatacag caagagtgat ttcagttcat
    15421 gacatacccg ttcaaagcgt ggatgagcaa atgcttgctg tttttgaaga tatagtgcca
    15481 aaggctacta aaataggaat gataggaact tgtgagctga tggagtgtgt ggctagaaat
    15541 ttagaaaaat tcaaacccca aaatatagtt atcgatcctg tgatgtttgc aaaaaatggt
    15601 tttgctttaa tgccacaaga aaattgtgat ttttttaaaa aaaccatagt gaaatttgca
    15661 gatattctta cgcctaatat cccagaagcg gaatttcttt gcgattttaa aataaaaaat
    15721 gaagaagata tgataaaagc ggctaaatat ttatgtacgc aaggagcaaa agctgttttg
    15781 cttaaagggg ggcatagtga agaaaatgcc aatgatgtgc tttttgatgg taatgaaatt
    15841 tttattttaa aaggcgaacg catagaaaca aaaaacactc atggtacagg ttgtacactc
    15901 tcttcggcaa ttgctagtaa tttagccttg ggaaaagatt tgtataatgc tgtaagtgag
    15961 gcaaaagaat atgtaagaaa tgcgatttat tattctttaa atttagggaa gggctgtggg
    16021 ccaactaacc attttttcag gtttttaaat gaaaaatgat ttagatctta gtctttatct
    16081 tgtagcaagt cgtggaaaaa aaagtgacga gcttttttta aacacgcttg aagaagcgat
    16141 aaagggtgga gtaagtataa tccaacttcg tgaaaaagaa ttaagttcaa gagaatttta
    16201 caagcttggc ttgaaagtac aaaagctttg caaggagtat gaaataccct ttttaatcaa
    16261 tgatagaatc gatatcgcct tggctttaga tgctgatggg gtgcatttag ggcaagagga
    16321 tttagaagtg cgctttgcaa gaaaaatttt aggtaaagaa aaaatcatag gcttaagtct
    16381 taagaactta gaacagttaa aagatattga cggggctgat tatttaggtt gtggtgcgat
    16441 taaggctact ccaactaaag aaagttctgt tataagtttt gaaaccttga gtcaaatttg
    16501 tgaaaaaagc cctataggcg tggtagcaat aggcgggatt gataaagagc tgattaaaga
    16561 gctaaagggc attaaaataa gtggcattgc agtagttaga gccataatgg atgcgcaaaa
    16621 tgcttatttg gcaactaaag agcttaggca agaaatgaat gaaaatttat cttttaaatg
    16681 agactgtttt tgagggtgtg gaaaatcttg ttttaaatga gatagttttt tacgattttg
    16741 gtgtcaattt agatgaattt gatgctttac tttgtacttc aaaaaatgcc ctaaaagctt
    16801 taaaaaaaac aaaaaatagt ttaaatttag atattaatgt atatgcagta gggcaaaaca
    16861 ctgctcaatt tgctaaggat atgggtttta aaaaggttca atttgcgcca aaatcttatg
    16921 gaagtgagct ttttaatcat tttaaagagg aattaaaaaa ccaaaaatgc ctttatttaa
    16981 gggctgaaaa tatagcttct actttaaatt tagatcttag aacttatggg gtagatttac
    17041 aagaaatcat tgtttataag aatgttttta aaaaaagcaa gcaaacaatc cttcatcctg
    17101 ctatttttat ttttacttct cctttgagtg tggaaaattt ttttaaacaa tatgatttaa
    17161 aaaaggaaga taaggtcata gcaatagggc agagcacagc aaaaaaactt actcatctag
    17221 ataatctttt tataagttct aaacaggatt taaaagagtg tgtgaaattg gctaaaagtc
    17281 ttatttagtt tgattccaaa atgattcttt tgtatgcaag ataaaggttt tatttattaa
    17341 aatttcatca ttgacatttt tttgtgtatt taacgctata ctcatatgcg cgattatgat
    17401 accatcttgg cttaaatttg catctttgtt gatcgcttga aatttgaaat ttttacactg
    17461 ggctatggga tagtggtatt gtattttgat tttatcgttt aaattaggat agtgaagcgt
    17521 gatagaatct aaacattcct ttccgtctaa tttagcttga taaagtaaat atttaacgag
    17581 tttctcatcg gctaaaattt gggcttgtaa ataataataa gcatctttta caaatcttgg
    17641 tatataactt gaagtggtga tatttaaact aagccatatc cctaaagcac tgattaaaaa
    17701 taccaaggat agtaaaatat aggctcgttt catatgaata acctttttgt aaggcaatat
    17761 tcttgctctt gttcttttaa acatacttta agtttttgtt tttgtatttc aaataagctt
    17821 acattatcca taaatataga gtattgctca agctgattat caaaataagg atagagctca
    17881 taatgaattt tatcttcttt aagaaataat tttattctag cttggatagg gataaattta
    17941 cccttaaaag aagcagtgat attattttct gaatgaatga atattttttt aatttcttta
    18001 tttactaaag cataaatgat attttgctca tcattataca attcttttcg attttgaagt
    18061 tgaagtttaa aattactatt gggagaatat aaacttgtat tgttttctaa aataaggcta
    18121 gaatttaata atttttcttt attatcatca agatataata aatcatcttt aagcaaacag
    18181 cttatatgat ttggctcaaa agtaatatta gtacaagttt gaagcaattt ttctaatctt
    18241 aacacactta aatgagtttt tagtatcaaa tctttcattt ttaattgttg attgtttaaa
    18301 taataaaatt cccacaatgt ccttgataga aaaagtgcta aaaatccgat tagaattaat
    18361 acaagaatag tttcaaaaag actaaaagct ttattcatcg taaaaatata gggagtaatc
    18421 ttgattttga atatgtaatt ttttaaattg aaagatatta tcatttataa agttttcttt
    18481 aaaatcaaaa gtttttaaat tctgtatatg aagttttata tctctttgat gaggatcggt
    18541 ataaagttta tcttgcagtg tgtataatct ttcaaaataa tttaaataat catgattgtc
    18601 atttagctga taaaataatt tagaaatact tgtaaaaatt aatcctagga taattataca
    18661 aagaattaat tctaaaagcg agaatgcaac tttcatgttg cactagcatt aagagcctca
    18721 aaaaaagtcc cacggatacc tttttgctct aatactttaa tcccttttat ggtaacacct
    18781 gcaggcgagc agatattttc cttaatgatg gctgggtgct cgttttctag caaggctgca
    18841 gcacttttaa aaagcgaacg agtgagattt aaactcagct cttttgataa tccttcatac
    18901 acgccagcat tagcaatgct ttcagctact aatgctaaaa aagcaggagc gcaaccgctt
    18961 atagccatgg cagcattcat ttgtttttct tcgtttaact cataagcttt gccaaaagta
    19021 tttaaaattt ctatgacttc atctttaaaa tttgaatttt ttaaaacata aggagttgtg
    19081 gaagctttat atttagctgc tgtatttggc attatccttg cataattttg ggcttggata
    19141 agttttaatt tatcaaaatc cgtattggct aaaactgaaa ttaaaatttt tgccttgcct
    19201 tttaaatttg ctgcgacact ttctaaggca taaggtttaa aagctaagat aatattttta
    19261 ttttctatat taaaatcttt atagagtaaa gttttaaaac cttctttttc taaaatttga
    19321 agcttttcta aatttctacc gactatatag atattataag aatcttttaa tccataagcc
    19381 aaagcttgcg ccatcgcacc attagcaagt atatataaat cagctttcat tacttcttaa
    19441 tataatttgc aatttgatcc gcttgaaaaa agttaggata agctacagta tctaagatta
    19501 cttgcaccat ggaattatta tcaagattaa taaccacagg agctaggaaa tttacagtag
    19561 attcttctat acttttagca attgctacta tattgaaaat tttcatattt gactctggtg
    19621 tcaaagaaag caattcttgg tagtatgtag gtatctcaaa ttcataatct ggtcttataa
    19681 gataaggatt aataagaaca aaagaaaaat cttttccatc aagactttta agtcttacaa
    19741 acacttcatc aatggttgaa aattccatat ttttggtttc ttcaaaacct aagatagggc
    19801 atttaacagc tagtgtcatt ttttctcctc gagtttataa taaaatattt tatcacaaaa
    19861 taagcaatat tagttccaaa atttaaattt atttatttat tttcactata attttaacta
    19921 gaaataatca taaagcattt aaaatagtgt atttaactaa aaaatgaaaa aggtaaaaat
    19981 taatgaaaaa aaatttcttt ctatgtattt tattggggat tttattcagt gcttgcagta
    20041 caaaaaatga tgaaggattg tataatttaa gtgcaagtga atggtataaa caaatcatta
    20101 aagatttgca agataaagat ttggaaaaag ctgatgatca ttataatggt atggcaagtg
    20161 agcatatagc agatccgctt ttagaaacaa cacaaattat cttagcacaa gcacatatgg
    20221 atgaagaaga atatcaatta gcggagtttt atttagatga gtataataaa aaatttggaa
    20281 attcacgcaa tgcagattat attcgctatc ttaaaatcaa agctaaattt gatgcctttg
    20341 ccgtgccaaa tcgtaaccaa gctttaatgc ttgaaagcca aaaagaaata gatagttttt
    20401 taaatgatta tccttataca gaatacgaac ctttagtaca gactatgtta actaaattta
    20461 atttagctgt attttattta aatgatacaa tacaggattt atatgagcgt acaggtcata
    20521 ctcaaagtgc tgaaatttac caagaaagat tgcaagaaag tgagttttat caacaaagca
    20581 ttatcaagcc agaacttcct tggtatagaa gtatatttga aaaattttag atttaaggga
    20641 aactgatgca aattgaagaa atgcaaaatt atccaagtaa tttacctatt ttagtagaag
    20701 atgaattatt tttatatcca tttatgatta ctccaatttt tattagcgat tcagcaaata
    20761 tgaaagcttt ggatttagct attaaaaatg attcaatgct ttttgtagcc ccttcaaagc
    20821 tcgaaaatgg aagatctttt gatgaaattt atgattgtgg ggtagttgga acgattatga
    20881 gaaaagttcc cttgcctgat ggtagagtaa aaatactttt tcaaggttat gctaaggcta
    20941 ggattataaa accactttcg agcaagccct tagaggctaa aatagagcta attaaagaag
    21001 agtttttaga gggcacaaaa aaagaagctt tactggatgt tttaaaagaa aaagttagag
    21061 ctttggcaaa tattagccat tatttttcac ctgatttgct ccgaactata gatgagggtt
    21121 tagatgcttc tagaatttgt gatttgattt taaatactgt tcgtataaaa aagcaagaag
    21181 cttatcaatt ttttatctta accgatctag aagaaaagct tttaaaatta atagacttga
    21241 tagcccaaga gatagaagcc aataaaattc aaaaggaaat taaaaacaaa gttcattctc
    21301 gtattgataa agtcaataaa gaatattttt taaaagagca acttagacaa attcaaaaag
    21361 aattaggtag tgacaatcaa aaagaagacg aagttagaga ttattataaa aaattagaaa
    21421 gcaaaaagaa atttatgcac gaggatgctt ataaggaaat taaaaagcaa attgaaaaat
    21481 ttgaacgtat acatcaggat aattctgaag cttctatgat acaaacttat attgaaaccg
    21541 ctttggatgt gccttttgag aaaatagcaa agaaaaaact tgatatcaaa gaagtggcta
    21601 agcagttaaa tcatgatcat tatgctctta ataaaccaaa agagcgcatt gaagagtatt
    21661 ttgctgttcg tgagctttta gaaaaacgcg gtgtagcaga taaagatggg gctaaggtta
    21721 tactttgtct ttatgggcct ccaggagttg gaaaaacttc actggctaat tctgtcgcta
    21781 aggccttaaa aagagaactt attcgtatag ctttaggggg cttagaagat gtgaatgaat
    21841 tgcgcggaca ccgccgtacc tatataggtg cgatgccagg gcgcattact cagggtttaa
    21901 ttgaagcaaa acaaatcaat cctgtagttg tgcttgatga aattgataag ttaaacagaa
    21961 gctttagagg tgatcctagc gcagttcttt tagaaatttt agatccggag caaaattcta
    22021 aatttaggga ttattattta aattttaatc ttgatttaag caaggtgatt tttatagcaa
    22081 cagctaatga tataagcaat atacctgctc ctttaagaga taggatggaa tttatagagt
    22141 taagctctta cactccaaat gaaaaatttc acattactaa aaaatattta attcctgatg
    22201 aacttaaaaa acatggatta aaatctagtg aattagatat taatgatgag actatagagc
    22261 ttatcataag cgaatacact agagaatcag gggtaagaaa tctacgcaga aagatagctg
    22321 aactgtgccg taaaagtgct aaaaaattac ttttagaaaa tatcaaaaaa gtaagtatca
    22381 atgttaaaaa tttaaatgaa tttttagata aaaaagtttt tgagatagaa aagcatgatg
    22441 gagaaaaccg cataggacaa gtcaatggct tagcatggac cagtgtgggt ggagatgttt
    22501 taaaggttga agcgattaag atcaaaggca agggagagtt aactcttact ggaagtttgg
    22561 gtgatgtgat gaaagaatct gctagaattg cttttagtgt gattaaggtt ttaatcgatg
    22621 aagggaagat taaaattcct aaaaagatga ttcttgatcc taaaactaat gtttatgata
    22681 gttataattt gcacatccat gtacccgatg gtgcaactcc aaaagatgga ccaagtgctg
    22741 gaattacgat gagtacagct attgcttcag tttttagtga taaaaaagtt cgttctgatg
    22801 tagcaatgac aggagaaata gatttagcgg gtaatgtatt gcctatagga gggctcaaag
    22861 aaaagcttat cgcagcatat aaggctgata ttaaaatagc tttgattcca aagaaaaatt
    22921 acgaaagaga tttaaaagat attcctgatg aggttaaaga taatatgaaa ataattggag
    22981 ttaaagattt tgatgaggtt ttaaaatacg ctttggttta aaatctagag cgaggggaga
    23041 aaaaggcaaa atattgattt tgcctttttt aataacttat agtccttcga aaggattgtt
    23101 aactacttct tttctatcta ctatataagg aataagagct acatgtctag cgcgtttaat
    23161 agcaacttct accatttctt ggtatttttt gcttgtccct gttaagcggc ggggcatgat
    23221 tttaaatctt tctgataaag catgttttaa catagctgta tctttataat caataaattc
    23281 aacttttgct tctgtgtatt tgcaatattt gcgagagtat tttctttttt ctgccatagt
    23341 ttatccttta aaatggtaaa tcggtgtcat cgctatcata agcatcaaca tcaatttctt
    23401 taattttttc ttggttttgg ttaggatttt gtgtttttgt ttgtgcttgc tgtggagctt
    23461 ttttgaaatt attttcactc atataaggat cgtaactttg gttttcataa tttgaataat
    23521 tattattagc tccataatta tttccaccat tgttaaaatt tccaccttgt tgaggattgt
    23581 ttcctagcat ttccatgttt tcaacttgaa cgctgtgctt agagcgcatt tgtccatttt
    23641 gatcattcca ttgttcaaat cttaaacgac cttctataag gactttagaa cccttagaga
    23701 gatattggtt tgctacttca gcagtacgac cataaaagct aatatcgata aagcaagttt
    23761 cttctcgtct ttctccattt gtggtaaacc ttcttgttac cgcgatagcc gaagctccga
    23821 tagcgtttcc attttgacca taacgcattt ctatatcgcg tgttagatta cctaccaaaa
    23881 caactttatt aaacattttt ttccttattg aatttcaggc gcgtctaaag gtttgatctc
    23941 ttttttagac tgtttgatgc catggcttag tttttcccaa gctgcaattt cttttttatt
    24001 ttcatatttt acaatcaaaa atcttattac ttcctctgta attcttaaaa ttctttcaag
    24061 ctctgcaatt aagtttgtag gagctttgaa ataaattaca aaataagttc ctctttcgta
    24121 ttttttgatt ttatacgcta attttctagt gcccattgga acaacggttt caatttctgc
    24181 accatttttt acaaggactt cttttacgaa ttccaacttt gcattcactt cctcttcggt
    24241 aagcgttggt tttaaaataa ataaaacctc ataatgtttc atatattctc cttttggatg
    24301 ttaagcctat gtttttcaca ggcaaggatt ttgcaaagtt tttacaatgc aaagcttaat
    24361 tatatcaaaa tatacttaat ctttactttt cgggcgtcaa tagagaatgt ttaatttagt
    24421 tttatgttga ttatcatttg ttacttaatt acaacatatt aaaaaaaatt aatatttata
    24481 tacttgctta ttttgatttt atgttattat ttattttgat gatacctgag tttagataat
    24541 taaaatacgg gaggatattt catgcaaaat gcaaaaccta tacgatggtt tacttttatt
    24601 gttttagtga ttggcggggg aacggttttt aaactttctt ctttaaaaga tgctttttat
    24661 gtacctatgc aggaatttat gaatcttagc aatactcaaa ttgggcttgc gctttcagta
    24721 tatgggatag ttcagactgt aggaaatttc gcttctattt atatagcaga tagattttcc
    24781 aaaaaaattc ttattccttt ttcattgatt tgcgttggct tggtgggaat ttatatttct
    24841 acttttcctt cattttatgg aattttgatt gcttggggtt tgctttcttt gtttggtgaa
    24901 gtggtgtatt ggcctgtgct tttaaaggct attcgtttac ttggagactc tactcaacaa
    24961 ggaagacttt ttggattttt agaagcaggg cgtggggttg tagatactat agttgctttt
    25021 agtgctttag ggattttctt acttttgggt tctggagcag gtggacttaa agccgctata
    25081 cttttttata gtgcttgtgt aattattgcg ggtatattag catattttct acttgaagat
    25141 gataagatca gcactaaaga tgacgagggg catgaaatca gtaaaaataa agctgcttgg
    25201 aatggagtta taaaagctgt taaaacacct gaaatttggg tagtttcttt gacaattttt
    25261 actatttatt cggtgtattg tggacttaca tattttatac cttttttaaa agatatttat
    25321 ggtatgccag tagctttggt gggtgcttat ggtattatca atcaatatac tttaaaattg
    25381 gttggaggac caattggagg ctatttggca gataagactt tccgttcttc tacaagatac
    25441 ttgcgctttg ctcttatttt ggctgcagtt gcaattttaa tttttatttt tatgccgcat
    25501 gaaaagttaa atatttattt tggaatgagt ttaactttag ggtttgcagc tattgttttt
    25561 actatgcgtg ctacattttt tgctcctgtg gatgagattg aaatgccaag agagatcagt
    25621 ggtgctgcga tgagtatagc ttgtatattt ggttattctc cacaactttt ttgtttcgcg
    25681 ctttatggtt ttattataga tcagtttaaa ggtttattgg gatatcaaat cgtttttgcc
    25741 ttaatgggat tttttgcgat ttgtggagtg attataacaa ctatcttgct tagaatgata
    25801 gctaagaaaa aaacattaca agaggtagcg tgatgaaaat tggtttagaa acagaaagta
    25861 tgcacctttg gtttcaaaat ggcagaatgg atatattttc ttatatcgat tttgctgagg
    25921 agctaggttg tgatggcatt attataaata ttatcaaaga ttttggcttg gatgaggagt
    25981 ggggctgttt aggaagcaac gacgagagtc atcttaaaaa aattaaagaa aaattagaca
    26041 cgtatggtat gtattgtgag attgattcta agggttttga taaggacaaa tttgaaaaaa
    26101 ttgcgaaagt ttctcagctt ttaggggtta aaatcatccg ttcttatgtc cccttgacag
    26161 acaagaataa aaaggttaaa aatgctagcg atggagctta tgatgattct aaaatcacgg
    26221 ccaaatttga caagagtgaa tttttaagta cagcagatga gatcaaggct ttaattccgc
    26281 ttttagaaga gtatgattta aaacttgcca tcgaaaatca cgaatatcaa acttctgatg
    26341 atttgcttga attattaaat ttgattcatc atcctagaat aggattttta tatgattttg
    26401 ggaattcaat gatggcttat gaagagccta ttaaagcttg tgagaatatg gctaaacata
    26461 cttttagtac acattgtaaa gatcatatcg tatttataga agatgatact aagtatgtat
    26521 gtggcgtgcc tttaggtgag ggaaatttgg atattaagac ttgtgtagaa attttaaaac
    26581 aagctggatt agatcgtatc aatgtagaac aatgctatcc ttattgtgcc acttttaaga
    26641 gagaagaggg tgcaggtggg attaaagagc tgggcaaagg agcttttaaa atcgaaaagc
    26701 ccttgtttaa tgacttaaaa gcaatgcagt attattaccc tcaagaagtc tctaaagagc
    26761 atctagaaag acttttaatt ttacaaaaag agggttgtga aagaagtgtg aaatatctaa
    26821 agagtattat ataaacaagc tttgatctaa agcttgtttg atttcttcaa atatgacaaa
    26881 gcgtttttta tacattgaat gcttgctgct tggaatttct tcaagatttt ttcgcttgtg
    26941 agaaagttca taatataaat gattattgat cttgacaagc tttcccccat tttctaacca
    27001 aattttttga taatcaacaa aatagccttt atcctctcct ttttgagagc ggatttgatt
    27061 tttttcatgg actccaagcg tggcatcgag ttttaaagat acacaaagca ttttaataca
    27121 ctctataagc agggcaatag gacgcaatcc gtagcatttt ttttgtaaag attttattga
    27181 tatctaaaac attaaaatca gagtattgat aaccttgtat gcaagaaatt aaaagcttat
    27241 tatctaaggt aaaacaaaaa cagcattgtt caatggtgcg ttttgatatc ttaaagaaag
    27301 tgcccaaaaa ccctcttcgg atacatgacg attgcttcct aagtagagtt caaaatcttc
    27361 atcaaatttg aaaataattt gatcttgggg tagaaattta aaactttcaa gtcccttgtt
    27421 tacatcataa atcaaagttt taacacgctc attagcgcta aagcttttat cgcaaaatct
    27481 tcttgtgaca ttgtagcaag catcgggtct atttgaaaaa aagttcttta ggtgttcatt
    27541 tcctttcata ttgagcgttt tttcaagaaa tttaacttga ggatagtata aaaattttct
    27601 agaataaaat cgcatatgac gccaaaaaat agtacttttg gatttgtcat taaaattagg
    27661 tataggaaat ttaaataaat tcattgcatc actctcatga tatcgttaaa tgttgcaaaa
    27721 accatcaagc ttaaaagcaa agccattcct ccatagctaa ggtattcaaa agctcttggt
    27781 ggaactttgc gtctaaaaat catttcataa agattaaaaa gtatatgtcc tccatctagc
    27841 atagggatag gcaagagatt taaaattcct aaattgatgg agattaaagc agtgataaat
    27901 agcaatacaa ccaagctttt ctcagctgcc tttgaagtaa gctcagtcat ggtgataata
    27961 ccacctaaat ttttagcctc aacttcacca cttatgagct tgattatacc ttttactata
    28021 agagtagaag ctttaatgct ctcatctaaa gcataattta tactttgcat gccttgatga
    28081 tagattatag tggtgcttcc actagggctt actccaagct gggcttttga aacaacttgt
    28141 ccaaaatcat tataagcttg tcctagtttt ggagtgataa gaaattctaa attttctcct
    28201 tttctgtcga taagaatttt taagggttca agacttaggt gattagaaat ttcatcaaaa
    28261 ctttgaattt ttatgccatt tatagcaagt atagtgtcat tattttcaag tcctgctaaa
    28321 gctgcagctg aattaggtgc gatatttcct atttgtggac ttagtttttg tatgcctaaa
    28381 tttcctatgg ctatgtaaag caaaaaggct aggaaaagat taaaaaaagg tcctgcaaaa
    28441 agaatataaa tttttttcat agggcttaaa atactatagc tatcttgatc ctgattttct
    28501 aaaccaggtt gcatatcatc ttgcccctta agcttaacat aaccgcctaa tggtaaagca
    28561 ctcaagcggt atttggtacc tttaaattca cgctcaaata agctttgtcc aaaacctatg
    28621 ctaaaaattt ctactttaac acctaaggat tttgctgcta aaaaatgacc tagttcgtga
    28681 aagaaaatca aaaaagaaat aactaagatg gttgctaaaa attctataga gtaaaattta
    28741 aacccaagaa ttaaaatcaa agctaaaaaa agtaaagatt tcattgtaat tttcctttgc
    28801 tttgcttaac ataactaaaa atatactcaa atcctgaata aagcgtgaga aataaagcaa
    28861 tgtaaagcaa gatatctcca cctatccatt ccatagttaa aaaccctatg gctatcattt
    28921 gaaaagttgt ttttaatttt ccagtaaaag aagcattgac atttaaattt tcacttacca
    28981 taaccacgcg aaaacccgtg ataaaaaatt cgcgcactaa gataagataa acaatccatt
    29041 cattagcctt tcctgataga agaaggccta aaaaagctgc tagggttaac attttatctg
    29101 ctagaggatc taaaattcca ccaagctttg tggtttgttg taaggttcta gctataaagc
    29161 cgtcaaaaaa atcactcaag gctgccaaag caaaagttaa agcagcaaaa taattaatcc
    29221 agctttgatg tatattatca aatttataac tcaataaaaa aaagagcaag ggtgctaaaa
    29281 tcatccttaa cacagctaaa gtattgggta tgttcataaa aaaccttatt ttagattaag
    29341 ataaaactat tagataaaat tgtataagat ttaggcaaag ctttagtaaa aaaatattta
    29401 aatttatatt tttttgaaat atagtgtaaa aaatataaac accttgccta aaagagcaag
    29461 gtaaaaatca aagaaattga actatcttgt caaattcaaa gcgatttttt tgtggaattt
    29521 tttcatcatt agaataccct aaagctatca ccaaagtaga tttttctttt ttagtatcaa
    29581 gcaaaagata agaatcgagt ttttctttat caaaaccgcc tatagtacaa cttgctatat
    29641 ttaaagcatt ggcactataa agtatactcg caagtgctat atgagcttgt tctcttgcat
    29701 aggatatttt ttgttcttgg ctaagggatt gtaaaaaagg catataagta tctaagcgtt
    29761 tttgaatttc tgcttcactc atatctcttt ttctaagctt atcttcaaaa taatctaaaa
    29821 aatcaagcct tgaaacaatg ataattaacg ccccgcaatc ttttacatgt tgttgttgat
    29881 tgcaaatttg agccagctct tcttttttat tgtcatcttg caccactaaa aatctccaag
    29941 gctcaagccc taaagaacta ggacttaatc ttgctatctc taaaatagta tccaaatctt
    30001 cttttttaag tttttcattt ttaaaatttc tacaagaata tcttgtgcta aaaatttcaa
    30061 gttctgtttt catcacttct ccttataaaa ttcaaccact tcatcaaatt ttaaacgttg
    30121 agtagggtat tttggctcgt gagcttgata gcccaaagat aagatcacag ccgtttcaaa
    30181 aggatgctca agtttaagaa aatcatccac cttatctttt tcatagcctc ctatcataca
    30241 agaatcaatc cccaaactca tcgcagctag cgacatttgc atcattgcaa gatagcattg
    30301 aagttgtgca taatgataga gttcattatc attcattgca ttggttttat gagtataaat
    30361 ttctaaaatt ttttgaaaat tttcttcgct agaacctgag aaacgacgca cttgtttttg
    30421 tgcaaattca tctttgcttt gaagatcttt tcttgctaaa aaaatgatat tatgactcgc
    30481 acttgctaca ttttgttgat tgtaacatag agttgagagt ttaagattgt gttctttttg
    30541 ttctaatact acaaatttcc aaggctcaaa tccatgcgag cttggggcta agactccgct
    30601 ttctaagata aaatgcaaat ccttttcatt gatttttttt atcattaaaa agtttacaag
    30661 ctctgcgttt tgaaattagt tctttaaaat tcattttatt ccttaaaatc aaaaataata
    30721 atattaatta taaaatgcaa agcttaatca aaaaatatta tagtttgata tttttcttaa
    30781 aaacaaaacc agatttttca aaacccattt tttggatata aaattcatga gcttgtgttc
    30841 taaaaaaact tgaacttagt tctaattctt catatccttg attttttgcc caaatttgga
    30901 tttttttcaa aaaagcttga cctatacctt ttcctcttaa agtttcatct tacgacaaaa
    30961 tcacaaatat aaagacaatg attatgataa agtacattaa agggcatgac tccacaagct
    31021 gctttgtagc ttccctcatt ttcataggca aaaagtttat aatgttgagt ttgtgtagca
    31081 agttggaatt tatctaaaaa atctttcaaa gataggttat ttcttaattg ttttatcaag
    31141 ggataaattt tttccaagtc ttcttttagc ttaatttctt tcatttttaa atcccttaaa
    31201 tttcaaaaat ctcaggtttt aattttaaaa gtaggcaaaa agttgccaaa acagcttgtt
    31261 cttgcataaa ttcacgatct ccatctaaat aaagcgtttc ttggataaaa gttccatctc
    31321 taaacattgc acctatataa atagtgcctg attttatttt tccctcatct ttttcgccaa
    31381 ctactccgct aatagctaag gcaaaatcag gttttgcggt cttaaagata cctttaagca
    31441 taaaatacac acaacgctcg ctgtattcgc cttgattttc taaaatgctt tcactaatac
    31501 ccaaccattc gtgtttgatt ttattagaat agcttacgat agaaccttca aaaatttcac
    31561 tcactccact aaattttgta agagtgcttg cgcaaagtcc gcctgtgcag ctttctgcaa
    31621 aagaaatttt gatctttttt tctaaaagtt ttgaaacgat aaattgtata ggatctttgc
    31681 ctaaaaatac tttttgtcca aaaagatttt ttacactcgt taaaaaacca tctagcttgc
    31741 caaaattaac acaacttgct ttaataagag taagattttc taatatcttg cttgatttta
    31801 tactgacttc gtaagacttg gttaaggtat caagcagtaa aacagcactc tcatcatcta
    31861 tgcctaataa acaaaaataa gcaaaattag gaaaaatatc tccaagcaaa ggaggaagtt
    31921 tttgtcctgg atttgtttta ataacattga tttttgaatt gataaaatca catataaaac
    31981 tatccttttg aaaataagct ttatcgggga ctagattatc ctcttttaag actagattgt
    32041 cttcgcttag ggtggctaaa atttttgcta tggtagcata gtggtttggc gtggtaaaaa
    32101 gagttatgaa atcataattg tctagtaatt tttcaagcaa aaagggtaat tctttatcgg
    32161 ttttattttg aaaacgagtt tcatgaattt ctttaaattt attttcataa ctacgataaa
    32221 tataatcctt aaaattttca ttcattataa gttcatcacc gataagaaaa agcaaatgtt
    32281 tcataatttt ttcctttttt atagtaatta tagctaaatt ttaaattatt ttgagtagaa
    32341 tttaagatta taaaaacttc atctaggtgg aacaatggat tataaagata ccctgctttt
    32401 gccaaatact acttttgcaa tgcgcgctaa tttggcagaa tttgagccaa agagatttga
    32461 aaaatggttt agcaagaatt acgcttatga aaaaatgaaa acaaaacgca aagaggcgaa
    32521 gaaagctttt actcttcatg atggccctcc ttatgctaat ggacatatcc acataggaca
    32581 tgctttaaat aaaatcttaa aagaaacgat tatcaaaacg cattatttta atggagaaag
    32641 cattcgcttt actccaggtt gggattgtca tggcttgcct atagaacagc aagttgaaat
    32701 caaacttgga gataagaaaa aaagcttgag taaaaaagaa attcgatcat tttgtagaga
    32761 gcatgcaaac gaatttgtga acatccaaag agatgaattt aaaagtcttg gtgtgattgc
    32821 ggattgggat aagccgtatc ttacgatgaa atttgaattt gaagcggcga tttaccgcac
    32881 tttatgcgag attgctaaaa aaggtttgct ttgcgagcgt tctaaacctg ttttttggag
    32941 ttgggcggct aaatcagctc ttgctgaagc tgaggtagaa tacgaagata aagaggatta
    33001 ttctattttt gtggcttttg acttagatga gcaatcttgt caaaaattgg gcatttcaaa
    33061 agcaagtgca gtgatttgga ctactactcc ttggactttg gtggcaaatc aagctatcgc
    33121 tttaaatcca aatgaaaact atgttatcac taaagaggga ttaatttttg ctagtgcttt
    33181 gcttgaaagt atgatagcta aaggtttgac aaagggtgaa attcaaaaag agcttaatgc
    33241 aaaagagttt gaaaaattag aagctatcaa tcctttaaat tcaagaaaat ccatcttgat
    33301 tatgggcgag catgttttaa tggaaggtgg aagcggactt gtacatacag ctccaggaca
    33361 tggcgaagat gattattatg cttgtttgaa atacgatata gaagtgatca tgcctgtgga
    33421 tgatggtgga tgttatgatg aaaccttacg ccacaaagga ctcttgccat ctgatttgct
    33481 tgatgagttt ataggacttc atatcttcaa ggctaatgaa aaaattttag agcttttagg
    33541 aaatcatctt ttacattctt ctaaatttat acactcctat ccattttgct ggagaacaca
    33601 taaacctgtg atttatagag cgactaagca atggtttatt ttaatggatg agccaaaact
    33661 aaagggtaaa actttaagag aatgtgctaa agagcaaatt ttaaaaacaa aattttatcc
    33721 acaaagcgga gtaaaaagaa taggctctat ggtggaaaat cgcccagatt ggtgtatttc
    33781 aagacaaaga gattggggga cgcctatagc tttctttaga gataaaaata ctaaagaagt
    33841 gatttttgat gctgagcttt ttgattttgt ggcaaatata tttgaaaaac acggagcaga
    33901 tgcttggtgg gaatttgaaa tcaaagactt aataccacaa aattcaaaat acaatgcaga
    33961 caatttagaa aaagtttatg atattttaga tgtttggttt gatagtggaa gctcatggaa
    34021 tgcagtttta aatagcggaa tttacgatgc aggagagaag agagcaagta tgtatctaga
    34081 aggaagcgat cagcatagag gttggtttca aagctctttg cttgtaggaa cagctatcaa
    34141 tgaatttgct ccttatgaaa gcatcttaac ccatggcttt accacggatg aaaaagggca
    34201 aaaaatgtca aaatccaaag gtaatgttat agctcctgag tatgtagcta aaacttatgg
    34261 ggtggaaatt ttaagacttt ggatactttt gagtgattat tctactgatt taaaaatttc
    34321 agacaatatc ttaaagcaag taggcgagca ataccgaaaa ataagaaata ccataagatt
    34381 tttacttgca aatactaatg acttggaaaa tttagaagta gaggaattta gctttataga
    34441 taaatgggta ctgactcgtg ctacacgcgt atttaaaagc gccaaagaaa atttcttagc
    34501 ttatgaattt gcaaaaggct ttaatgtgct tttaaatttc ttaagcgctg atttaagtgg
    34561 aatttatctt gatataagca aagacaggct gtattgtgat gctaaaaata gcaagcgcag
    34621 aaaatctgca caagtggcaa tggctttaat cgctagagaa cttttaaatt tattagctcc
    34681 aaatttaacc tatagtgtag atgaggcttt agagcatgct aatagcttga taaaaggcga
    34741 tgctaaggat gtatttgatt tgagcttgga agaaaaattt gaatatgatt ttaatataga
    34801 tgatgaattt ttattgagcg tgcgtgagaa attctttgaa aatatcgata tactaaaaaa
    34861 agacaaagtg atcaaatcaa cattagaact taatcttgac acaaattcaa aacttttaaa
    34921 ttctatacct aaagatgaat taaatgattg gtttatggta agttttgatg aaaatttaca
    34981 gggtgaagtt ttgtgtgaat ttgaagtgga gaatgagagc tttaggatta tgaaagctac
    35041 gctttgcaaa tgtcctagat gttggaaagt agaaagcgct aaagaggatg agccttgcat
    35101 gcgttgcgct gaggttttaa aacatgcttg ataatcctat ccccaattcc attattatag
    35161 ctaccatagc aatcaccgct attttttgtg cagtggcggt tgtttttatt aaaaatttgg
    35221 caaagaaaca gaaggaaaaa gaatgataac cttaaaagaa gctttgaaat actctaaaga
    35281 agagcttgaa aatctaaaaa aagaactcaa tgataaggct aagaaagaaa ataaaatagg
    35341 tgcttatata gagcaattct taggtaaaga cttaagcgat gggggtgaag gtatacctat
    35401 agcgattaaa gataatatca gtgtaaaaga ctgggaatta acttgcgcaa gtaaaatttt
    35461 acaaggatat gtagctcctt atgatgctac tgctattaaa aatttaagat ctaaaggttt
    35521 tagtccttat ggacggacta atatggatga atttgccatg ggaagctcaa gtgcaacttc
    35581 attttatgga aaaaccctaa atcctttaaa tttcgctcga gttccaggtg gttcaagtgg
    35641 tggtagtgct gctgccgtag caggtggttt ggctttggct agtttgggta gcgatacggg
    35701 tggttcagtg cgtcagccag ctgctttttg tggttgtgtg gggtttaagc ctagctatgg
    35761 aagagtgagt cgatatgggc ttgcttctta ttcttcaagc cttgatcaaa taggcgtttt
    35821 aacgcaaaat gtagaagatg cagctattct ttatgatgcc attgcaggtt atgataagat
    35881 ggatagcaca agtgcgaaag tagattttac acctactgct cctaatttaa atgcagagaa
    35941 aaaattgaga attgctgtga tagaaaatta tgtcaatgaa gcaagcgctg aagtaaaagc
    36001 cgcgctttta aaaagtatag agatgttaaa agcaaatgga catgaaattg tttataaaaa
    36061 tatgcttgat tctaaatttg atattgcagc ttattatatc atcgcaacag ctgaagcgag
    36121 tgcaaattta agtcgttatg atggggtgcg ttatggaaaa cgctcgcaaa atacagaaaa
    36181 tcttaaagat atgtatatta atactcgtag cgaaggtttt ggtgaagagg taaaaagaag
    36241 aattttacta ggaacctttg ttttaagcag tggttattat gatgcttatt atataaaagc
    36301 acaaaaagct agggctttta tcaaggcaaa atatgaagaa atattacaag attgtgatct
    36361 tatttttatg cctgtaactc ctacaacggc ttttaaattt gatactcaaa aaagccctat
    36421 gcaaacttat ttagaagatg tttatactat ctctgtaaat ttagcaggac ttgggggtat
    36481 tagtgtgcct gtgggcgagg ataaagaagg gcttaatatc tcagcccagc ttatttgcaa
    36541 ggcttatgat gagcaaacct tgctagatgg agctttaagt ttagaaaaaa ttataaagga
    36601 aaaataaatg aatataatta agcgcgcttt gacttttgag gatgtacttt tacgcccttg
    36661 ctattccgag gttttaccta aacaggtaaa aattcacacc aaacttacta aaaacatcac
    36721 tttaaatatg cctttaatct ctgctgctat ggatacagtg acagagcaca gagctgctat
    36781 catgatggca agacttggtg gacttggtgt aattcataaa aatatggata taacttcaca
    36841 ggtaagagaa gtaaaaagag tgaaaaaaag tgaaagcggg gtgatcatag atcctatttt
    36901 tgtaggtcct aaagcaagtg tagcagaggc tttggaaatc atggcagagt atagaatttc
    36961 aggagttcct gtgatagata gcgatagaaa gctcataggc attcttacta atcgcgattt
    37021 gagatttgaa aatgattatt taaatttggt tgaaaatgta atgactaagg ctcctttgat
    37081 cacagctcct aaagggtgca ctttagatga tgcagagaaa atttttagca aaaacaaagt
    37141 agaaaaactt cctatagttg atgagcaagg acgcttagaa ggacttatca ctataaaaga
    37201 tcttaaaaaa cgcaaagaat atccagatgc aaataaagat agttttggaa gattgcgcgt
    37261 agcggctgcg attggagtag ggcaaatgga tcgagtagat gctttggtag aggctggagt
    37321 ggatgctgta gttcttgatt cagcgcatgg gcattctaaa ggtatcattg atacggtaaa
    37381 aagcgttaaa gaaaaatatc caaatttaga tttaatcgcg ggcaatatcg ctaccgcagc
    37441 tgctgcaaaa gcactttgtg aagcaggcgc tgatgctgtt aaagtgggta ttggcccagg
    37501 aagtatttgt actacgcgta tcgtttcagg agtaggtgtg ccacaaattt cagccattga
    37561 tgaatgtgct atggaggcta aaaaatatgg tgttcctgtg atcgctgatg gagggattaa
    37621 gtattcaggt gatattgcaa aggctttggc agcgggtgcg agttcgatca tgataggttc
    37681 tcttttggca ggtactgatg agagtccagg tgagctcttt acctatcaag gaagacaata
    37741 caaatcttac cgtggcatgg gatcgatagg ggctatgcaa aaaggaagtt cagatagata
    37801 ttttcagcaa ggaactgcac aagataaatt agttcctgaa ggtatagaag gacgcgtgcc
    37861 ttatgtagga agtataaaaa atgtcgtgca tcagctttta ggaggacttc gctcttctat
    37921 gggttatgtg ggtgctaaag atatagaaga ttttcaagca agggctgaat ttgttgaaat
    37981 cacaagtgca gggcttaaag aaagtcatgt tcatgatgta acgataaccc atgaagcacc
    38041 aaattataag gtaaatcaat gagttttgaa gaaaacttaa aaaatgcaaa cgaatcctta
    38101 gaaaagctca atgataaaga attaagctta gatgaaagtg tgaaaattta taaagaagga
    38161 ttaaaaagca ttgaaaaagc aaggcttgct cttgaaaaag caaggcttga agtggagcat
    38221 atcgatgagt aagattgctg ctttgcagtt tccgacttta gcattgagcg aatcaaggct
    38281 tgattattat ctaaaagctt ctaaggatag tggagcaaat ttagtcgttt tgggcgaata
    38341 tgtgcttaat agttttttta cagagctttt ggctatgcca aagtctatga ttaaagagca
    38401 aagcgaagct aaaaaagaaa gcttgattag gcttgctaaa aaacatgagc ttgaaatcat
    38461 cgctccttat atcagtgtag aaactaaggg atataaaaag ctttgtttaa aggtcgctcc
    38521 taaccatatc aaaacctatg aacagcaagt tttaatgcct tataatcact ggaatgagga
    38581 aaaatttttt agcaataaaa tcaataaggg caacttaaaa ctttttactt ttaatcacga
    38641 taaattaaaa tgcgctttgc tttttggctt tgaagtacat tttgatattt tttggcaaca
    38701 aattatggcc aaaaagattg atttagttat cgttcctagt gcttgcacct ttgaaagcaa
    38761 acaaagatgg gaagagcttt taaaaacaag agctttttta aattctacaa atatcttaag
    38821 ggtaaatcgc ataggcacta caaaagatga atggagcttt tatggcgata gtatgcttat
    38881 caatgctttt ggagagatag aaagcagact gggctctgaa gaagaaatgc ttatcgtaga
    38941 acctaaaaaa gcagatgaag ctagaaaaat ttgggctttt gataagatag ttaaaaactt
    39001 ttaagactaa ttttattaga tatataaaaa ttttttacat aatgtgattt tattttaaag
    39061 gataataatg agaaagattt tattgcaaat tttttctttt agttttattt ttatgggaat
    39121 ttttgctttg gttaggtctt taatggtaaa aaatttaacc aatgaaagtg aaaatagcct
    39181 aatggtgtat atgtatggat taggccatga tatgagaact tttagtgcta tttttttacc
    39241 tttatttttg tgcggtttat tttcttatat aggtttagcc tttaaaaata gaaaatataa
    39301 tatcatgggg gggggtaatc tctaaatttt atttctacct ttctagtctt tatatagctt
    39361 ttatatcttt tattgtttta atttctactt ttatacatta ttattatttt caactctatg
    39421 cgagtaaaat tgatattttt atttttggtt taaaagatga cgatactaaa gctatactat
    39481 ctatagtctt ttctgattat cctattataa gaatgcttct tttggctgtg atttttagta
    39541 tattttgcat ttggatcaat attaaaattc ttaatttaaa attaaaagaa atacaaataa
    39601 agccaatatt ttttatcttt ttaaatattt tactaatcta tgcttatgtt gtggcattgc
    39661 gaggacattt tacttacaat gccttaaggg tttcaagcta tgaatttagc actataaagg
    39721 cttttaatga aatttcaaca aatcctttga tggctttttc ttgggcatat aaagagtaca
    39781 aaaatcaaca agaatttaaa agtgtagata caaaacagct taatcaatta gaggaaaaac
    39841 tttttcctat gtttgacact actttaccac atcaaaatca tgccaaaaat cacatttatg
    39901 ttaatatcat ggaaagtttt ggtttaaatt tggcggagtt tagcactaaa aaaattgatc
    39961 tttttggaaa cttaaaaaaa cattttgagc aagatattgt ttttactagg tttttatcta
    40021 gtgcaaataa tactatagaa agccttaatc gtttgatttt tttaagccca aatactattt
    40081 caaatggttt atatcaaaaa gaagagttgg ccttcacacc tttgcaaatt tacaaaaacg
    40141 caggatatag aataatattt gtttatagtg gtaatgcttc ttggtataat cttggaaatt
    40201 attttaaaaa tcaaggtgcg gatcaaatca tagatgaaaa tacacttatg caagattttc
    40261 cacaagctaa agaaacaaaa cataaatatg gcatagctga tgagtttatg tataaaaaaa
    40321 tatattctat ttttgaaaat gctaaaagtc ccacgcttgt catctctctt agtatttcca
    40381 ctcataggcc ttatatacac aaaagtaaaa aacagcttat tgatacagaa aatctagatg
    40441 aaaaaatatt aaatcaattt attattgata attccacaga agctttaaat acttatgcgt
    40501 acgcaaatga tgaatttgga atgtttttag atcgcataaa agaaagtaaa tttaaggaaa
    40561 atattattat tgctgctaca ggcgatcaca ggtttagaga tattaagatg gatataaact
    40621 ctcaaaaagc ttttgcttat agtgtgcctt tttatttata tcttccaaag tatttaaaaa
    40681 atgatattta ttatgataaa aaccgcgtag gttcacataa ggatattttt ccaacgcttt
    40741 acaatcttac tcttaataac acaaaatatt taagcctagg tggaagaaat atgctagcac
    40801 ctataaaaaa tcaaaaatta gaatttggtt tcaatgaggt tgtttggatt gatcaagatg
    40861 gagtatatga tggaaataaa ggctattatt ttgaaaataa tgctagtata aaagatacaa
    40921 ataaagcttt tgagttagat ttatatcata agaatttttc aaaaatttat aaagagttgt
    40981 ttcaaaaaca attaagctat agattggtta atttaaaaac taaaaacaat gaatagattt
    41041 tgtatttaag ggtttttcta tattttttaa taaaaaagta ttaaaggctt aaataatgaa
    41101 aaatatccat tttatcgtag gaatttccgc ttttgaaaaa ttagtaggat taagcaatac
    41161 tttaaatgta ggagtagata ataaagtaag aatagctaaa aactctcatg agtttgtagg
    41221 agaaaacaaa gacatagaaa taggcgctaa tcaaaatact attatccata aagatgagat
    41281 aaggaatgtg aagagagaaa ataaattatt aatagaaaag tctttaaccc aaacaataga
    41341 aaaagaattt ttcctcaatg ttcatcaaaa tttatccgcc catatacaag ataacacatc
    41401 tttaaagtct aattccatgc aaacaaagat agaagagcaa tattctttag aatcagacaa
    41461 ttcaactttt gactttcaaa cagattgtga agtaaaggca ggtaatcaaa tcctccatca
    41521 agtaggtgat actcaaattg ttactaagaa agattgtgtt attattaaag caggcggagt
    41581 agaagtgatt atagactcta atggacttgt ggttaaaggt ggagagctta aggcagagta
    41641 aaggataaaa atgagccaaa caaacaataa cacagaaatc aaagaacaag acactcaaga
    41701 tgaaatcatt tgggaaggaa aaaaggatat actttcgttt ttgctttatt ggataacata
    41761 tattgtattt ttatgttttt ttctttattt atttcctaga ttatttaata aagaaataga
    41821 ttataaatgg tttatagttt ttttacattt cttttaggca tatatgcatt tgcacgagcg
    41881 atctataaaa tggcaaatat taaaagaatt tatgtcacaa aagaaaaact tgtgattgag
    41941 tatcatatta aaaatgattt ggtttttcct ttaggaactt tttttatata ttatcgtaaa
    42001 atttcatatt caccttctcc aggacatata gtgatacata cctttggaga taaggccaaa
    42061 gaataccttg aacctggttt attcagtgat ggcgatgatc caacaaaagg ttgttttgaa
    42121 agaattaatg ccattataaa accctatgta atgccttatt tgctaggctt aagtgatgaa
    42181 gaatttgaaa aaatcttttt ccatataaac gctactagtg aaattgatac cactttcctt
    42241 aaagaagcaa tggaactcag aaaagagaaa aaagatgaat gaaaataata cacaaggaaa
    42301 tgaaaaattg atttttttag aaatgaaatg atttgggagt taataaagaa tatataaatt
    42361 tttaaaaata atgctttttt ataaagtttt aagagctttt ttatattttt attttagtaa
    42421 aaaagtgtta aaatttaagc tttacaatac aaaggcttag ataatgcaaa atatccattt
    42481 tatcggtata ggcggtatag gaatttccgc tttagcaaga tttttaaaag aaaaaggctt
    42541 taagattagc gggagtgatc ttaaagaaag taaaatcact aaagaactag aaaaagaagg
    42601 ggttaaggtc agtatccctc atcataaaga caatatttta aataaagatt tagttattta
    42661 ttctgccgct atcaaagaag aaaattctga atttaaatac gctaaagaat taggcattga
    42721 atgcctttca cgcaaggagg ccttacctct tatcttagaa gataagcgcg tttttgcagt
    42781 tgcaggagca catggaaaaa gcacaacttc aagtattttg gcttctttgc ttgatgatgc
    42841 ttctgtgatc atcggagcga ttttaaaaga atttggttca aatatgattt ataaagaaag
    42901 ccaaaacctt gtttttgaag ctgatgagag cgatagttct tttttaaatt caaatcctta
    42961 tttggctata gttactaatg cagaagcaga gcatttagat cattatggca atgaagtttc
    43021 aaaactccat catgcttata cgcagttttt agacacggct aaaattcgcg tgattaatgc
    43081 tgaagatgag tttttgaaaa attataaaaa tgagtcaatc aagctttatc cgagcaaaga
    43141 tatcaaaaac tgcaccatgt gtatagaaaa tttcaaacct tttacaagct ttgagttgaa
    43201 agatttaggt gaatttaagg tttttggcat gggatatcat ttagcccttg atgcgtcttt
    43261 ggcgattttg gcggctttaa atttcttaga tatagaaacg ataagaacta ggcttaaaaa
    43321 ttatcaaggt attaaaaagc gttttgatat tttacatgct gatgaaaatt tggttttaat
    43381 cgatgattat ggtcatcatc ctaccgaaat aaaagcgact ttaagcgcag cacaagaata
    43441 cgcaaaatta ggtagatata aaaaaattac agccattttt gaacctcacc gctacacgcg
    43501 tttggctaca aatttaaagg aatttgcaaa ggcttttgaa ggtgttgatg agcttgtaat
    43561 tttacctgtt tatgctgcag gagaagagcc tatagaactt gatttaaaag cggtttttcc
    43621 taaggcttta tttgtagaag atatcaaaag agagggtaaa tttttagtag cttccaaggg
    43681 acaggttttt gaagaagggc ttattatagg ttttggtgca ggagatatca gtaataaatt
    43741 aaggcaaaaa aatgagtagg gtttttttat atcttttaat catcttaatt ttagccttaa
    43801 tcacttttgc tttgcgtgaa aaattaggca aaaaaactaa accttttttt ggtattttgc
    43861 ttgtgatttt tattgtttta gcggtatttt ttgaatttga aaacacgcaa aaaagtcatt
    43921 taagaacaga tattatcgta gcttttaatc aaaataaaaa tattttatgt aaagatataa
    43981 atatctctaa agcttatttt aattacgaat ttgggacagg aagctttata tcaaaggata
    44041 ataatcaaag ctttaattcg ttgattatcg atattagaga ttgtaggtta aacgatgaat
    44101 gagatcaaag aagaattact tttaaaactt gatttaaata cttatttgta tgaatttaag
    44161 tcttgttttg caagggataa agaaattttt ttacaggggg attctcacct tcattttaag
    44221 cgtatcaatg agctttgcga gactgaattt ccaaatttgc ccgagctttc aaatttggat
    44281 aaggctttgg tacatttaag caaacaagga gttttacatt tagatgagat ttttgaattt
    44341 gtaaaaattt ttcgctattt tgaaaagatc aaaaagctca atttaggcag caatttaaat
    44401 tcatggcttg aaaagattga atttgtcaat ggaattttag atctttgtga aaaatttgat
    44461 gaaaagggcg agttaaaaga aagcttagat gaaagattgg taaatatcaa tacagctcta
    44521 agattaaaaa atgaaagcat aatagctgag tttaagaaat tttgctatac aaaagcttta
    44581 atgccttatc ttatcgatac acaaatccat cttataaaca atcttgaagc cttgcttgta
    44641 agaggaggat ttaaccacgc tataaaagct aaaatcatag gtagaagtag tgggggagga
    44701 ttttacatcg ttccgcttag tgttgaaaat ttgcaaaatg atatagaaaa aatcaaaaat
    44761 caaaaagaag aaatttatta tgaatacgct aaaaatttct cagctttttt agcaaaaaat
    44821 ctaccttttt taaaatttat caatacagcc tttgatcttt ttgatcatta tagtgctagg
    44881 gttttgcttg ctaaaaaaag ggattttgaa tttgttttgt gtgatcaaag tacggattta
    44941 gtgcttaaaa atttcgccca tcctgcctta aaaaatccaa aaagcgtgag tttggaattt
    45001 aaaaaacaag ttttaatcat cacaggggta aatgcaggcg gaaaatccat gcttttaaaa
    45061 tccatgctaa gcgcagcatt tttagctaaa catcttttgc ctatgcatat aaaagcaagt
    45121 gaaagtaaaa tcggtacttt taaagaattt gatgccatca tagaagatcc gcaaaatgtt
    45181 aaaaacgaca tttcaacttt tgcaggaaga atgttgcatt tttctagact tttttctagg
    45241 aaaaatttgc ttttaggtat cgatgaaata gagcttggaa cagattttga agaagcggct
    45301 tgtttatata gtgtgttgat ttcaaaactc atagctaata atcttaaaat catcattact
    45361 acacaccaca aacgccttgc catgctttta gcaaagaatg agcaagttga actcatcgct
    45421 gccttatatg atgaagagct ttcacgccca aaatacgagt ttttaaaagg caccatagga
    45481 aaatcttatg cctttgaaac cgctttgcgt tatcagattc cgccgaattt agttagcgag
    45541 gctaaaaagc tttatggcga ggataaagaa aatttagaag agcttgtggg taaaaatatc
    45601 aatcttgaat tagaactaaa agctaagctt gaaaatgtcg agaaaaaaga gcaaaaagtc
    45661 gatgaaattt tactttcctt aaaagagcaa aaagaaaaaa atgaacaaga atttcgtacg
    45721 agtttgagaa atttagaatt taaatttcac aaagccatag aagaagctaa aaaaaccata
    45781 cagcttaaag atatgaaaga caagcaaaga agtcttaata aagccaatga acttaaaaaa
    45841 gaaatcatct tgccaagtat ggagcaaaac gaagaattgc gtgtggggga ttttgtaaaa
    45901 tatgaaaaaa ttaagggtaa aatcataagc atttctaaaa acgatgctat ggttgaaagt
    45961 gatgggatca aacttcgtgt gtctttaaaa ctgcttaaaa aaagtactcc tacacctaaa
    46021 ataagtccaa aaacaagtat tagtgtaaca aaacctagca atctaagcgt tagcttggat
    46081 ttgcatgggc ttaggagtga tgaagctctt tcaaggcttg ataaatttat ttcagatgct
    46141 ttgatagcag gatttgacga ggttttaatc tatcatggca taggcacagg aaagcttgcc
    46201 tttgctgtaa gagagttttt gaaaactcat aaaagtgtca agggctttaa tgacgcaccg
    46261 atcaatcaag gtggctttgg tgctaaggtg gtgagattat aaggaaataa atgattacaa
    46321 aagataattt aaaacaagtt ctagaaaact taggctttaa aaataaaaat gaaaattatg
    46381 taaaaacaat caataattac acacttttaa tagattataa aaaccaaagt attaattacc
    46441 caaaagaaat aaaaattcac gataaaacta cttctaattt ttcacaccct gaaaattttg
    46501 tagtttttga atgtgtgcat agacttttag aaaaaggtta taaggctgaa catttagagt
    46561 tagagccaaa atggaatctt ggcagggata aaaaaggtgg taaggctgat attttagtaa
    46621 aggataatga aaaaaatcct tatttgatta tagaatgtaa aaccacagat tctaaaaata
    46681 gtgaatttat aaaagaatgg aatagaatgc aagaagatgg cgggcagctt ttttcttatt
    46741 ttcagcaaga aaaaggtgta aaatatcttt gtctttatac aagtgatttt agcgataagt
    46801 tagaatataa aaattacatc atacaagctt acgataacga agaatatcta aaagaaaagg
    46861 aattacaaaa ttcttataaa aaatctaata acaatataga actttttaaa acttggaaag
    46921 aaagttatga actgcaatat tttaaacaag gtatttttga agcaaatgtc aatgcttata
    46981 aaattttaga aattactcca acttttgata atcttaagga acttaaagaa gaaggtaaat
    47041 atcacgaatt tgcaaaaatt ttacgcaagc ataatatatc aggcaaggaa aatgcctttg
    47101 ataaacttgt aaatattttt ctttgtaaaa tctatgatga aacttttaat aaaaacaatc
    47161 tcaaatttgg atattttggt gtaatggcag atacttatgc aaatatgcaa gatagattaa
    47221 tgtggcttta taaagaagct atgaaagaat tcttaggaga gaaaattacc tttgtatcta
    47281 atgaagatat agaaaaagac tttaagcaat taaagataaa aactttaaaa gaagtaatgc
    47341 aaaattacat caaagaatta aaattttatt caaataatga ttttgcattt ttagaagtgc
    47401 ataataaaga attattttta aaaaatgcac ttgtattaaa agaaatagta gagctttttg
    47461 caaattacaa gcttacccaa aactctacaa atcaattttt aggcaatctt tttgaacttt
    47521 ttttgcaaaa aggtatgaag caagatgaag ggcagttttt tacccctatt caaatttgtg
    47581 aatttattat gtattcttta ccgcttcaag aaatgttaag caaaaactct aaagctttaa
    47641 aggtgattga ttatgcttgt ggtgctggac attttttaaa cacctatgcc aatgagctta
    47701 agcgttatct aacagaagat gagcttaaag agcattataa aaatatttat ggtattgaaa
    47761 aagagtatcg cttaagtaag gtttctaagg tatcaagtgc aatgtatggg caaaatgaaa
    47821 tcaatatttt atacgctgat gcacttgctt cttttgaatt agcaaataca aataatttag
    47881 aaggagaaaa agcaaaacca caaatagaat caaatagttt tgatttgctt atagcaaatc
    47941 cgccttattc tgtaaaagga tttttagaaa ctttaagtga taaatctaaa aatacctata
    48001 aactttttaa cgatgatata aacatagaaa caaataattc tattgaatgc tttttttgtg
    48061 agcgagcaaa tcaaatttta aatgataatg ctaaagctgc cattatctta ccaagttcta
    48121 ttttaaataa agattctatt tataaaaata caagagaaat attatttcaa aattttgatt
    48181 ttattgccat tgtagagcta ggtaatcaaa catttggagc aacagggaca aatacgatta
    48241 ttttattttt acgcaaaaaa gaaactttta aacaagaaaa tcatcttatt tctcaagatt
    48301 atagtttgat taaagaacgc atagaagctg aaaatttaaa agacaatgaa aacttttatc
    48361 aaaattatct aagtgcgtat tgtgatttta gaaaatttga taaagagctt tatagtaatt
    48421 ttttaaatgg aaacttagat tctaatcttg cagagttaga agcctttaaa gattatcgca
    48481 atgcatttag gcaaacaagt gattataaaa aacttaaaga atctaaaatt tataaagaaa
    48541 gtaaagataa gcaagattta gaagataaag cctttttagc ttatgctcag gcaatagaaa
    48601 aggataaatt gctttatttt agtctaagtc ttaatcaaga agttttaatc ataaaatccc
    48661 caagtgatat aaaagaacaa aagaaatttt taggttatga gtggagtaat agaaaaggtg
    48721 atgaaggttt aaaagaattg cacgagcctt atttgagccc actttttgaa agaggcaatc
    48781 cacaaaatga gactaagctt aatactttaa tttgtaaagc atttttaaaa actcttagcg
    48841 atataccaaa agatttgcaa ggctatgcta gtaaagcaag gcttgttgat atgatagatt
    48901 ttgaaaaagt ggaatttaat aaagctataa gtttaaatcc tagcaattca acgcaaagtg
    48961 agatgtctaa tccttttata aattctaaat ttgagttagt aagacttaaa gattttgtat
    49021 tagatattca aaccgcaaag cgtcctagtg gtggtgtcgg caaatatgaa aacggtgcac
    49081 tgagtcttgg tggagaacat atagacaata aaagtgggta tatcaaatta gataatccta
    49141 agtatgtacc aatagaattt tatgaaagtt ttgcgttgca agataaagga attgtaaaac
    49201 aatttgatat tttaatatgt aaagatggtg cattaactgg aaaaattgca atggtgcgta
    49261 atgaatttat taggaaatct gcaatgatta atgagcatat ttttttattg cgttgtgata
    49321 atatagcaaa acaaaaatat ttattttata tattacattc ttatagtgga caacaagctt
    49381 taaagtctaa aattacaggt tcggctcaag gcggaatcaa taaaacaaat ttagaatcta
    49441 ttttaatacc aaatgcagac tttgagattc aaaagcaaat cgtggcagaa tgtgaaaagg
    49501 tagaagagca gtataacaca ataagaatga gtgtagaaga gtatcaaaat ttaatcaagg
    49561 caatacttca aaaatgcggt attatagatg atgggggggg tatgagctaa attctatttt
    49621 agaaaatttg caaaaattag aatctaagct tgattttaat ctcttgtttt catttataga
    49681 tgattttact aatgcaaggc aagaagactt aaagaaattt aaagaattcg tcaagaatat
    49741 aaaagctatt ttagacaccc ttctgatatc tccaaaagat ggctggaaga gaatttcttt
    49801 aaagaatgaa caatatatag aacttaatcc tagtaaaaaa gaaatatcaa aacttgatga
    49861 aaatatgctt gtctcattta tagaaatggc tagtgtttca gataagggtt atattcaaag
    49921 taagatagat aggtcattaa acgaagtaag aaaaggctac acatatttta tagaaaatga
    49981 tattttgatt gcaaaaatta ctccttgcat ggaaaatggt aaatgtgcta tcgcaaaaaa
    50041 tctaacaaat aacataggtt ttggtagcac agaatttcat atttttagag caaaaacagg
    50101 gcttgatagc agtttcttat tctataatct aaatcaacaa aatataagag aaaaagcagc
    50161 tcttgctatg actggagcaa gtggacacaa aagagttcct ataagttttt atgaaaatct
    50221 tacaatccca ctcccaccgc tagaaattca agaaaaaatt gttcaaaaca ttgaattagt
    50281 ggaacaacaa attgattttc ttaatcttaa attagaattg ttagaaaaag aaaaagaaaa
    50341 aatcttacaa aaatatttat tttcttaaag catttttcgc taaactttgt aaattttata
    50401 aggtttagcg atgaaaaaca ttatgatatt aagcggagcg ggtttgtctg ctccaagtgg
    50461 gcttaaaact tttagagaca atgatggact ttgggaagaa tacgatgtga tggaggtttg
    50521 ttctgcaacg ggctttagaa aaaatcctaa aaaagtactt gatttttacg atgcaagaag
    50581 ggcacaactt caaaatgtaa agccaaatca cgcccatgaa aaaatcgcac agttaaaaga
    50641 aaaatggggt aaaaaccttt ttgtcatcac gcaaaatgta gatgatttgc tagagcgtgc
    50701 agggtgtaaa gatgtagtac atttgcatgg atttttgccc gaacttcgtt gcctaaaatg
    50761 tgaaggaatt tttaatatag gctatgaaaa attcacagat aaacaatgcc caaaatgcaa
    50821 aagtaaggat ttaagacaca atatagtcat gtttgaagag caagctcctg cttatgctac
    50881 gctttattct ttacttcatc aaacttcatt atttattagc ataggcacaa gtggggcggt
    50941 tttgcctgtg gggcagtatg cttcaatgtg tgaaaaaagt attttaaata tttatgaaaa
    51001 agatgtgaat ttagagcgat attttgataa aatctatata gaagatatta taagcgctat
    51061 tgataaaatc gcacttgata tagaaaattt tatgaaagat ggtaatgttt gattcttttt
    51121 taagtggagt ttttttgggc tttggagtga gtgtgccttt tggacctgta aatattttga
    51181 ttttaactta tgcactaaaa gcttttaaaa attccatagc tgtaggactt ggagcattta
    51241 gtatagatat gctttatctt tttttgcttc aatttgggct tttaaatttc ttagacaatg
    51301 tcatttttat gcgttttttg gcgatttttg gtttttgttt tttaacttat atggcttatt
    51361 tgatgttaaa aaagaaaaat gaagatttgc atttggatca gcataaagat tttaaagaaa
    51421 gtcttttaaa aagctatgtt aaaggtatca ttttaaatgg ctctaatcct tatgtgatag
    51481 gtttttggct tagtgctaca ggcatagttt taagcaatca acacgcttat tctacgatac
    51541 tggggcttgt tgttgctatt cttttttgga taggtgcttt agcttttgtt gtcgcaaaat
    51601 acagctatct ttttagtgca aaggtgattc gtatcatcaa tatagtttca gctttgatta
    51661 tagagtattt cgctctgagt ttattataca aaacttttat aggataaaaa aatgaatgca
    51721 aaagaatttt taatcgaact tttaaaattt aaatctgtta cgccaaatga tgatggagct
    51781 ttaaatttca tcgctatgga actgagtgat tttgaagctt tttttataga aaaaaaaggc
    51841 attaaaaacc ttttactcac taaaaaattt aaagatgaag gcgagcattt agcttttggt
    51901 gggcatgtag atgtcgttcc tgcgggtgag ggttggaaaa atgatccttt tgagcctttg
    51961 gaggaagaag gctttatcta tgcaaggggt gctcaagata tgaaaagcgg agtagcagcc
    52021 tttgtggatg cggtaaagaa tgcggatttt aaaggagcaa gactgagtct tattttaaca
    52081 agcgatgaag aaggcgaagc tatatatgga actaaggctg ttttagaatg gatgcaagaa
    52141 agagatatgc tacctgatta tgctgtggtt gcagagccaa cctgtgttaa aaaaatcggc
    52201 gatagtatta aaatagggcg tcgtggttct atcaatggta agcttttgat acgcggaaaa
    52261 caaggacatg cggcttaccc tgaaaaatgt atcaatcctg tgcatgattt cgcaccggtt
    52321 ttaaaacttt tagcgggttt tgatcttgat ccaggtagtg ctgaatttag cccttcaaaa
    52381 atcgttataa ctgatattcg cggaggtatg ggggtgtgta atgttactcc aaatgattta
    52441 agacttatgt ttaatgttcg caattctcct gatacaaatt tagaagatgt aagagcttat
    52501 gtggaaaaaa tttgccacgg cttaaattat gagctagaat taacgcaatc aagcgaacct
    52561 tttttaacaa gcattgacaa taaaatcgta caaaagatga atgaaagcgt gcaaaaaatc
    52621 actcatgaag taccagagct caataccaaa ggtggcacaa gcgatgcgag atattttgca
    52681 aaatatggcg ttaaggtggt tgaatttggc gtttgcaatg acagaattca cgctattgat
    52741 gagagagtga gcgtggaaga atttgaaaaa ctttgtcttg tttttaaaga tttggtggag
    52801 aattttaact aggaaaagtt atggatatat ttaaaaaata tacaagcgaa attcaagcga
    52861 tttttgaagg aaaaaattat aatgagcata gctttagaac ttgttttgaa aatttactca
    52921 acgaattaaa acctaaagaa gttaaaatta ttcatgagcc aaaaagtgaa aaagggcaag
    52981 gctctataag acctgatttt aaaacttata aacttataga taaagaaaaa gagttaagct
    53041 ataatcatct tgtaggcttt atagagtgta aaaatttaga tgtagattta aatttacatt
    53101 taaaaggaaa acaacttagc aaatacttgc aaatttcacc caatatcatc tttacaaact
    53161 ataaacgctt tatacttttt tcttttgaaa aagttgtttt tgatattgat ttgctagatg
    53221 ataagcttga tttaaaagaa gaaaacataa gcatatttag aaatcttctt aaagcttatt
    53281 ttgacgataa tagcaccacc ataaaatcaa aacaagaatt agtaaaagtt ttaagtacgc
    53341 aaagttttta tttaagcaat gctttaaaaa tttcttttga tgaaagtgat gcaaattctt
    53401 cttttaaaag attttttcga aaaacaaaag atacctttaa aaatatagaa aagatagatt
    53461 taaaagatga agaattttgc gatattttag ctcaagctat agtatatgga ttttttgttt
    53521 cttacataga aaatgatgat tatgacttag aaaaaatccc catagaaaat ttcatttcat
    53581 ttttaccaag cacttttaga actttaagtg aatttgtgta ttttgctata ccttcttttt
    53641 ctcttccgca agatatcaaa tatactttag aaaatatcaa aaaaacttta tcattgatag
    53701 ataaaattgc actttgtaaa attttaaatc aagatttaga aagtgtaagt atatatttgt
    53761 atgaagattt tttaaaggct tatgatgatt tgagagctac gcaaaaacgc aaagaagggg
    53821 gtgtttttta cactccaaaa agtattgtgg atatgatagt ttcttctctt gatgaacttt
    53881 taaaaactaa attgaataaa aataaaggtt ttaatgacca aggcgtaaaa gtacttgatt
    53941 ttgctacagg cacaggaagc ttcttagcta gtgtttttga aaaaattatt tccaaagaaa
    54001 gtgaagtttt taaaaatgaa gccataaaaa ataaattttt aaaagatatt tatggttttg
    54061 agctttcttt tgtgccttat attgtagcaa ggttaaaact aggacaaatt ttaagaaaaa
    54121 atggctttgt aaattttagt gacgctgatt ttcaaatttt tcttaacaat actttggact
    54181 tagaaaaaat tgcaaatttt gatatgttta tgcctttgga aaatttagat acagagtgga
    54241 aaaaagcaag agatgttaaa cacagtcaag atttgcttgt tattttagga aatcctcctt
    54301 atagcgcaaa aagcaaaaac aaaggcgaag atatactaga gcttttaaaa aattacaaac
    54361 aaggcttaaa tgacaaaaat atacaacctt taaatgatga ttatattaaa tttatgcgtt
    54421 ttgcacagtg gaaattgcta gagcaaaaca aaaaagattt atttgaagaa aaaaaaggac
    54481 ttttaggttt tatcacaaat aactctttta taaatggaaa aactcataga aaaatgagag
    54541 aaagcttgta taaaagtttt gatgaaattt atatactgaa tttacacggg agcgataaag
    54601 acgctaagaa tgatgaaaat gtttttgata taaaagtagg tgtttgtata agtttgtttg
    54661 taaagtataa agatgaacca agtaatggtg ctaaggtatt ttactactct acaggtgata
    54721 ataatatttt ttcaagaaag gaaaaatttg ctcttttgga tgatgtaaga caaaagggtt
    54781 taaatgctat caaatgggaa gaattgagct tagatgagcc ttatttttgg tttattaaaa
    54841 gagaatttaa aaataaagaa tatgaaaatt tttgggcgtt agcaagcgat aaggcagagg
    54901 ataaaaagtc tatattttta aattatagta gtggaattca aactgaaaaa gataatatag
    54961 ccatacagct aaataagcaa agtatggaaa atgttttaaa ggattttaaa aatttaacaa
    55021 aagaagaaaa tgtaaaaaaa tataatttag ataattctat aattttgaat actttaactc
    55081 aatatgaaaa taatacaggt tttattagta aaatacatta tagacctttt gacattcaat
    55141 ggacttttta ttcagagaaa caaggatttt taggacgccc tagatataaa accatgcaac
    55201 attttttaga taaggaaaat ttaggacttt gttttataga atcatcaatt catgattatt
    55261 tttctcattc aattgtttgt agcaatataa cggatggaaa tttttttgga tttagaagtt
    55321 ttacagcccc actctatctt tatgttaata atgaaaaaat tccaaatttc acaagcgaat
    55381 ttctagccta caaagaaaat cacaagatct taaaagacaa aagtcctgag gaaattttgt
    55441 attttatcta tgcaaattta tacaatccaa gatatagaga aaaataccta gagtatttaa
    55501 aaacaggctt tgctaggatt aatttcgaag tagaacaaaa gacttttgat gattttgcta
    55561 ctttaggtaa aaaacttgta gaacttcact tgtttaaaag agatttgaaa gatgagattg
    55621 attttatctt tttaaaagaa gataaaaagg caaattttaa gatagaaaaa tatcaagaaa
    55681 aagatcgctt catagataat aaaattatct taaatgaaga tttggccata agtcctataa
    55741 gtgctgaaat ttggcaattt actataggcg gttatcaagt cataaaacaa tggttaaaat
    55801 atcgcaatga ttataaatgc tccaaagaag aactagagca tttgctaaaa atgtgtaaag
    55861 ttataaaaga aactataaat ttacaaaagg aattaaatga ttattaacgg agaaaaattt
    55921 gagcttaaag agcttaaatt tatggatttt atcaaagaaa agggttttaa aatcgaactt
    55981 atcgccttgg aattaaatgg agagattgta cctaagagcg aatttgaaaa tttgatttta
    56041 aaagaaaacg ataaagctga aattgtaagt tttgtaggag gtggctgatg agaattaaat
    56101 ttaatggcaa ggaactagat acaaaattga gcaccagttt ggattttttc aaaagtgtaa
    56161 gtaaaaatga aaatgatgtg tggattatca atggttttgc aacgaaagaa aatataaaaa
    56221 ttcacgaaaa cgatgagctt ttttgtatag aaagaaatgc cctacctcca aaagatgcct
    56281 tagatgcgat gatgagagca agacatacgc caaaacttca cgataagctt aagatttcga
    56341 gcgtagcggt ttgtggttta ggtgggcttg gctcacatat agcgataaat ttagcaagaa
    56401 gcggtgtggg gtatttaaag ctgattgatt ttgatgtggt tgaacctagc aatcttaacc
    56461 gccaagctta ccgcgtaagt gatttgggga aatttaaaac cgaagcttta aaagagcaaa
    56521 tcagtgaaat aaatccttat atcaaaactg aaatttgcac tttaaaaatc gatgaagaga
    56581 atttgcctga tttatttaaa ggtatagata tagtctgtga ggcttttgat ggcgcacctg
    56641 caaaggctat gatagcacaa aattttcata gattttataa agacactact ttaatctgtg
    56701 cttcagggct tgcaggatat ggcgatagca atagtataca aacaagaaaa attgctaaaa
    56761 atttctatgt gtgtggggat ttggtaaatg gtgctaaagt aggaaatggg cttatggcac
    56821 cgcgtgtaaa tatttgcgct ggacatcaaa gcaatcttgt cttagagctt ttggcaaata
    56881 aggagtaaaa aatgcaagaa aatttaaaaa atgatagctt aaaaatagga aaatatgaat
    56941 ttaaatcaag atttatttta ggatcaggaa agtattcttt agagcttata aaatcagcca
    57001 tagaagaagc caaagcagag atcattacac tggctttgcg ccgtgcaaat acgggtgaga
    57061 ttgctaatat acttgattat atccctaaaa atataaccct cttgcctaat acttcaggag
    57121 ctagaaatgc tgatgaagct ttgcgtatcg caagactttc tagagagctt ggctgtggag
    57181 agcttataaa gatagaggtt ataggcgata gtaagtattt gttgcctgat aattatgaaa
    57241 ccattaaagc ttgtgaactt ttagcaaaag aaggctttac ccctttgcct tatatgcatg
    57301 ctgatcttta tgcagctaga gctatgcgtg atgcaggggc tgcagctatc atgcctttag
    57361 cagcacctat tgggagcaat aaaggcttgt gtgctaagga atttatacaa attttactta
    57421 atgagatcga tttgcctatc attgtagatg caggtattgg aactcctgca caagcgtgcg
    57481 aggctatgca aatgggagta agtgcagtga tggcaaatac agctatagct gaagcaaaag
    57541 atatcgcttt gatggcaaaa gcattttctt tagctataca ggctggaaga gcgggttatc
    57601 tagcgggttt agcaagcgtg agtgaggcta aggctagttc tccattaaca ggctttttaa
    57661 gggattgatt atgcaagatt atatgcagta tttacctcac atgcaggaaa taaaaagcga
    57721 aattttaaat aaggttttaa gtcaagttca aagctatgat gagagtcaat ttagcgctaa
    57781 agatgttaaa aatgctttaa atcaaacaca tttaagcata gagcatttaa aagccttgct
    57841 ttcaagtgcg gctgaagatt ttatagaaga attagctttt aagtcggcta aaaccaagca
    57901 aaaatatttt gggaattcta tctcgctttt tactccactt tatttgtcaa attattgtaa
    57961 ttctaaatgt gtttattgcg gttttcaaaa aggaaataaa atcgcaagag ccaagcttag
    58021 cgaagatgaa attcatgaag aaatgcaagc tattgctaaa acaggtttac aagaaattct
    58081 aatgctaaca ggtgaaggaa gggagtttgc aagcgtagaa tacatcgcaa aggcttgcaa
    58141 gatagctagg gagtatttta aggttgtagg tgttgaaatt tatcctatga atgaggatga
    58201 gtataaaatt ttgcatgaaa atggctgtga ttatgtaacc atttttcaag aaacttacaa
    58261 tcctttaaag tattctaaaa ttcatttagg gggtgaaaag cgtatttttc cttatcgttt
    58321 taatgggcaa gaaagagcct taagagcggg tatgcgaggg gtagcttttg cagcactttt
    58381 ggggattgat gattttagaa aagatgcact tgcaacagct cttcatgcgt attttttaca
    58441 aaaggcttat ccgcatgctg aaatttctat ttcagtacct cgtttaagac ctattatcaa
    58501 taatgctaaa attcacccta aagatgtaag cgaaaaacgt cttttgcaag tgctttgtgc
    58561 ttatagactt tttttacctt ttgcaggtat tactatatca agtcgtgaaa gagtaggatt
    58621 tagagatgag gttgtaaaac ttggagcgac aaaaatgagc gcaggagtaa gcgtgggtat
    58681 aggagagcat aagggcgaga aaaaaggtga tggacaattt gaaatttcag atgaacgagg
    58741 cgtggatgaa attttagcta tgcttaaaaa ctcaaatttg caagctgtga tgagcgatag
    58801 tatctatgtg ggataaaaaa atcattgcta taagcgatag aaaatgtgtc gagatagact
    58861 ttctaaaaca agtagaaaag cttgctaaat caggcataga cgcttttgtg cttagagaga
    58921 aggatttgag tgaatttgag tattatgatt tggctaaaga ggttttagct atttgtgcta
    58981 aacataaaac aacttgtttt ttgcattttt ttgatagaga gtgtttaaag ttaggacatc
    59041 gctattttca tatgccactt gctttgttaa ggcaagagcc aaagatgagt aagtattttc
    59101 atatgatagg cacttcagtg catagtaaag aagagctttt agaggcgatg aattatgggg
    59161 taaattatgc ttttgtaggt catatttttg agagttcttg taagaaagat ttagagccaa
    59221 gggggcttga atttttaaat tctttacttt cttttagcca aattccactt tatgctatag
    59281 gcgggattaa tgtacaaaat attgcaagct ttaaagatat caatgtagct ggtgtttgta
    59341 tgcgtgaggt tttaatgcgc gaaaaagatg tgaaaaaata tcttgttgaa tgtaaaagaa
    59401 acttgctttg ataaagagtg aaacaatgga gcaaattctt tccttgccac aagatttaaa
    59461 acaattaaaa ggtgtggatt ataaaaattt taaatcctgt acttttgcaa aatataccca
    59521 agtaagcgcc tcacactctt cttttgtcaa tgtaggcagc catcttttaa cctttgtaag
    59581 aaaaggatat aaaattttac atacggcatc aaaagactat aaaatcgact cttatgaaac
    59641 cttattttta aaagcgggaa attatacttt aagcaatgta ggacttagta gcggtgttta
    59701 tgaagcttat ttgtttttct ttgataatgc ttttttaatc gagcttattt ataagtataa
    59761 agatcttttt aaactagaac aagcaagtga ggagagtgaa attttttggg taaaaaatga
    59821 taaaatttta caaggaattt tagaaagttt taccccgcat tttgatgaga atacacaaat
    59881 tttagatccc atagtcagtc ttaaatttga agagattttt ttgcatttac ttttaaataa
    59941 aaatacttat ttcataggct ttttagctgg aattttaaaa gaatttcgtt tagatctttc
    60001 gcagcttttt gagtattgtg ggagagaatt tgtaagcgtg agcgaaatgg ctgattttgc
    60061 aaagcttgat tttgctactt tttctagaga atttaaaaaa tgcttcgggc aaagtcctaa
    60121 aaaatggcta gatgaaaaaa gattgcaaaa agctaaagtt ttgcttgaat tttctaaaaa
    60181 aaatgtaaat gaaatagcta atgaatgtgc tttttcttca gtggcttggt ttatcgagag
    60241 atttaaagaa aaatacaatc aaacccctaa gcaatatcaa aaatcaaaaa acttgtattt
    60301 tttatcaaaa aactagcaca ctttttctat ctaaatcaat ataatcagca taaatatttt
    60361 taacaaaagg agaaaagtat gaaaaaatat gttttaagtt tagcgcttgt tggagcaagt
    60421 ttgcttggag caagcgagtt gaaatatcaa gaatttgatg gctttaaaag ccctgaaagt
    60481 atttttgtag ataaaaattc tgtatatgta tctaatgtag gtgaaaaact tgagcctttg
    60541 gcaaaagata atgatggttt tatctctaag cttgataaaa atggtaaagt gcttgagcat
    60601 aaatttataa gtaatctaaa tgccccaaaa ggtatgatgg aagttgcaaa tacgctttat
    60661 gtggtggata ttgatgtggt gcgtggtttt gatttgaaaa gcaaaaaaga agtgtttaat
    60721 ttgcctataa agggtgcaat ttttctaaat gctatcgaaa aactaaatga cgatacactt
    60781 ttggtaagcg atacaggcac aggacttgtt ttaaaagtgg atttaaaagc gaaaaaatat
    60841 gatgagttat taaaacttga tatcgctaaa tttggcggtc ctaatggact ttacttagat
    60901 agaaaaaatg ataagctttt tatagcagga tatcatccag atggtgctag tggcggtgtt
    60961 gtgatgagtt atgatttaaa tgacaaaaaa ctaagcgtga ttaaaaatga aaaagaagct
    61021 tatgatggaa tcgttcctta tgaaaatgcc ttgcttgtaa gttcttgggg tgaaaattta
    61081 aacggggtga tttatcgttt agaagatgat aaagcattaa agcttgattt gccttctatc
    61141 aaaggtcctg cagatatctt tatagagggt gatactttat ggattcctaa gatggtagaa
    61201 ggtaaaatac ttaaagtaga acttaaaaat taaggattta atgctttctt ttagaaaaat
    61261 tttttggtta aatgttgcta ttgtcataat tgtagcattt aaccttaggg ctcctattac
    61321 tgcgatagga cccatgatcg atattatcca agatgagtat aatcttaatt ccactcttgc
    61381 aggtgtgctt actagccttc ctttgatagc ttttggtagc atttctttta tagtgggtta
    61441 tttttctcct attcgtgcga ttattgttgg aatttttctt atttttatcg cagaacttat
    61501 tcgttcttat ttaggtgttt atggtttatt tttaggaatg cttggtatag gttgtggtat
    61561 agctattgcc aatgtgttat tgccaagttt tattaaggaa aaatttccta aaaaaatggc
    61621 aagtatgatg ggaatttata gtcttgtttt aagcatttct tctatagcag gaattgcttt
    61681 atctatgcct ttgttaaata tatttgattt agcgggtgct atggtttttt ggtcggtttt
    61741 ttcttttatt gccttaatga tttattatcc ccaagctaaa aatggccgct tttttcgtac
    61801 caagaaaaaa gagagtaaaa aaatcaatct tttaaaaaat ccaaccactt ggaaaatcac
    61861 tctttttatg ggttttcaaa gttttttggc ttattctttg tttttttggt atgtgcaaat
    61921 aatcgtagaa aaaggctatg ataaagattt tgcaaccaat atggtacttt tttctcaact
    61981 tgtagccgct ccaatctctc tttttggtcc cttgctttta ggaaaactta aaaagagttt
    62041 acatacgcct tatatagcta tattgtgcgc gatgtatgcg gtatcttttg gaattttatt
    62101 tgcatttgat actcggttta tgattatgct tgctgcattt attgtggggt ttccttgggg
    62161 tggtgttttt ggcatcgctt tgctttttat cgctcaaaaa agttctaatg caaaaatagc
    62221 tgcaagactt tcggcttttg ctcaagggtt tggatattta atcgcagcgc aagggcaatg
    62281 gatcatagga tttttccatg atatgtttgg aaattttaca agctctattt gtatactttt
    62341 tatcgtgggc atacttgtta atatttttgg atatttagcc tataaaagca aagttatttg
    62401 ataagcttta atgccttttc aagcaaaata tctgcaccat ttttttgtgc catatcttta
    62461 agctttgtag aaatatcttc taaatttagc ttgaatatag cttttaaaat ttcatcagga
    62521 taggtgttat tttgcataaa aatttgacat aaagctttat cttgtaaaaa tttagcatta
    62581 aaatactgat gatttttagc agcgtgaggg tagggtatga aaatacttgg tagagtattg
    62641 gcacaaagtt caaaaagtgt gcttgcaccc gctcgcgaaa tagccaaatc tgcattttgc
    62701 attttttctt ctaaatgagg gctaaagtca aatacatcag cttgtatatt taagtcttta
    62761 taagcttgtt gatacttttc aagctcgttt tttccgcatt gatgaatgat attaatgcct
    62821 tttttttgaa gttctggagc taggtttaag gctaagtcgt ttataaattt agctccttgg
    62881 gatccgccta gaaaaatgat attttttaat tctttgcgaa ttcttgcttt tttaaaaaat
    62941 ttatctgcca cagggtaggg tacgatttct ttttcaaaag cgctataaaa ttgcttagca
    63001 aaaggcttta aaagtttatt taaagagccg ctttttgaat tttgctcgtg aataaataaa
    63061 ggcaagtgtg aaaacaaagc agcaaaagaa gcaggagcag cactgtatcc tcctacgcta
    63121 aaaaccgctt tgatatcata atctttaaag atttgcttac attctttact aagcttgaat
    63181 gtgtggagta aggaattgat ttttccaagt ttgttttgat tgacaacccc acgagaactt
    63241 aaaaagaatt tcgctttaaa acgagtttcg ctttcaaacc aagctctatc ttgaccattt
    63301 tgacttccta tataaacaca ctctatattt tttttaatcg cactttctag taaacatcgt
    63361 acaatggcta ggtgtccacc cgttccgcca cctgttagaa ctattgtcat aatttaacct
    63421 tttttgaaat cattaaaaca tatccaattc ctatacaaat tgcccacatt gaacttcccc
    63481 catagcttaa aagaggtact gcaacccctt ttaaaggcgt aagagaaatg ataccaaagg
    63541 cattcataaa gaatgaaaag agtaaaagca aagcaatgcc tgaacaaaat ataaaatctt
    63601 gtttttcttc acatcttcct gcaattctaa aaattcttaa aatcatccaa agataaataa
    63661 aacaaataag ccccaagcca aaaagtccta tctcttctgt gatacctgaa agaacgaagt
    63721 cagtatgcac ctcacttaaa aaaccaagtt taaaagtacc tagcccaagt ccttcaccaa
    63781 ataaccctcc atgagctatg gcatttaagg agtgtgaaat ttgataaggc tcgctattgc
    63841 cacttaccct taaagcatct gccatccaat caggaagcat aggcaagaaa gcatcttgta
    63901 tatttcccca ccaagaagct atcctttgga tacgcctttg attgctaaaa attaccatga
    63961 ttcctatcat cataatgatt aaaattccaa aggcaaaaag tcttttgcta gcacctgcaa
    64021 aaaaagctag agctaaaatt aaaaagaaag aaataacgct ttgccctaaa tcattttgtg
    64081 tgatgtaaat atagcctatc acgatagaag ctaaaataca ataaggcaag agaattaaag
    64141 cttcatgctt aatcgctttt ttgctatcat caatgcgtct tgtataactc caagctaaaa
    64201 aataaatcag tcctatttta aaaaattcca caggtgaaat agaaagaggt cctaagcgaa
    64261 tccaacgctt tgcgcctcca ctagcagtcg ccaaagcaga gggtaaaaaa ggcaggataa
    64321 taatacatat aaaagagcct ataagtatgg ctaggataat tcttttagca agtattttat
    64381 caggatcaag acgagaaata aaaaacatga ttaatatacc gctaagccca aaaaagagtt
    64441 ggcgtataaa aaagtgaaat tcattataat caaaaaaaag cacagtaaaa acagtaagag
    64501 aatatgaaaa tactatacct atgcttatta aaatgcaact taaataaaat aattttttat
    64561 cggcaatcat gtaaaattgt aatttttctt tcggaataat ttaaaagttt attataacta
    64621 aaataaatta aattttttgc taagtttttg taaggatatt ttgctagaat atgagatatg
    64681 taaataaaat ttataaaggc aaattatggt acaaattcat aagattctta tagcaaatcg
    64741 tgctgaaata gctgtccgtg taatccgtgc ttgtagggat ttacatatta aaagtgttgc
    64801 ggtttttaca gaacctgatc gtgagtgttt gcatgtaaaa attgccgatg aagcttatcg
    64861 cataggcaca gatgctataa ggggttattt ggatgtagga agaattatag aaattgctaa
    64921 agcttgtggg gctgatgcta tacatcctgg ttatggattt ttaagtgaaa attatgattt
    64981 tgctaaagct tgtgaggaag caggaattat ttttataggt ccaaaatctg aagttatcca
    65041 caaaatggga aataaaaaca tagctcgtaa attaatggct caaaatggga ttcctatcgt
    65101 tccaggaaca gaaaaattaa atgcttatag tatggatgaa atcaaagtat ttgcagaaaa
    65161 aataggctat cctgtgattt taaaggcttc aggaggtggt ggcggacgag gaattcgcgt
    65221 cgttcataaa gaagaagaat tagaaaatgc ttttgattct tgcaaaagag aagcattgac
    65281 ttattttaat aatgatgaag tctttatgga aaaatatgta gtcaatcccc gccatataga
    65341 atttcaaatt ctaggggata attatggaaa tattatccat ctttgcgaaa gggattgttc
    65401 tatccaaaga agacatcaaa aagtgattga aatcgcacct tgtcctggaa tttcagacaa
    65461 tctaagaaaa actatgggtg ttactgctgt ggctgctgct aaggctgttg gatatactaa
    65521 tgcaggaacg atagaatttt tgcttgatga ttataaccgt ttttatttta tggaaatgaa
    65581 tacaagaatt caagtagagc accctgtaac tgaagaaatc acaggagtgg atttaatcgt
    65641 gcgtcaaatt cgtatcgcag gcggggaaat tttagatcta gaacaaagtg atatcaagcc
    65701 aagaggtttt gctatagaag caaggattac ggctgaaaat gtatggaaaa atttcattcc
    65761 aagtccaggt aagatagggg agtattatcc agcacttgga ccatctgtaa gggtggatag
    65821 tcatatttat aaagattata ccgtgcctcc ttattatgat tctatgcttg caaaattaat
    65881 cataaaagct acaagttatg atttagcggt taataaactt gaaagagctt tgaaagaatt
    65941 taccatagat attagaacaa ctataccatt tttgatcgcg attactaaaa caagagaatt
    66001 tagaagaggg tattttgaca cttctttcat agaaactcat atgcaagaat tattagaaaa
    66061 taccgaagat cgtcatcaag ataataaaga agaagttatc gctgcaatcg cagctacttt
    66121 aaagaaaata cgcgaaagta gagaataatg gatttttttg atagtcttaa gagcataaaa
    66181 aaagaaatgc aaactcattc taaggaacaa aagaacctta aaaactcaaa taaaaaggat
    66241 atgaagcatt ttaataaaga gataaaaaca cagccaccag aaatgaactt agataaagaa
    66301 atgcaagagg ttttcttaaa acaagaaaaa ttacaggatg agtttttgga atttattaaa
    66361 aatgcagata ttaagaaaat ttaatgctag aaattggttt ttgtactctt gaagacgaat
    66421 gtccttatct aaaagatagg cgttctagga tagagtacaa atatatagaa aattgctcta
    66481 aggaaattaa tagcgagctt atcaggcgtg gctggcgtcg ttttggtagg tatttttctc
    66541 gtcctatttg caaggattgc aaagaatgtt taagccttag aattttagta gatgaatatc
    66601 aattttcgcg cagcgaaaga agagtgatca ataaaaacac aaataccaaa atcatattaa
    66661 gaaaaccttt actaagtaat gaacatttgt ttttgtatga taaatatcac cgctttatgg
    66721 aagagaaaaa aacttggaaa agatatgatt taaatttcag acaatattac aatctttatg
    66781 ttgatggatt tatgaatttt ggctatgagc ttgcttttta tgtggaggat aagcttgttt
    66841 gtgtggattt aatcgattgg cttgaagatg gaatttctag tatttattgc ttttatgatc
    66901 cagatttttc tcatctttct ttgggtaaat tttctttact tagcgaaata aagatagcca
    66961 aaaaagaaaa attaaaatat atttatttgg gatattttgt aaaaaagtgt caatctttat
    67021 cgtataaagc cgattataca cccaatgaaa ttttaaaagg cacaaaagag ctttttgaga
    67081 atgagatttt atgggagaga tgagatgcag atcgtgcaaa ctttagaaac tatcaatgtt
    67141 aataccgatg atattaatgt ttttcagtat tttaaagact taattaccaa aaatttcaca
    67201 aaggtagtag ggcgtaaaaa taaaattttt tctttttttg aagaaaatga aattccacag
    67261 cgccgttatt tcttaaaagt tttagatcaa aaatatcgta aaagcacaaa tgaaggtata
    67321 gagaatttac aagatgctca ttttaaaact tttagattaa tttttgagca aaataatatg
    67381 cttaagccta tgttgtttat caagattgat tttgttgcgg gtagaatttt gatgaagtta
    67441 agctctaatg aaaaattatt tattacttat ataagaaatt attttcaaga tcataatata
    67501 gaatataatg aaatgacaaa tattctaatt ttagaatata aaaacgagaa tacccttgaa
    67561 ctttttgaag cttttgcaaa tgagagcgag catttaaaat attgcgtgaa ttttgaagtt
    67621 gaccgcgaag agtataaaaa atttcgccaa aatattcaca ataaagaaaa tatgaaatgg
    67681 aaatttaatg ctttagctaa gctttttagt aattatttta atactttaga atgcactccg
    67741 caaaatgatc ttagtgaaat cagacaaaaa tatttgattt tggtaaaact ttatcatcct
    67801 gattttcatc aaggaaaaag tgcaatagaa aaagcttacg caagagaaca gtttgaaaaa
    67861 atacaaatcg cctatgataa cttaaaagca ctttataaga ataatactta aaaaaattaa
    67921 attaatcatt ttggttaatt taatttttct ctctcataaa tttttcttaa tttgctatct
    67981 agtttaaaac aaaatttaaa aagtgcaggt actacgagta aggtaagcaa agtcgaactt
    68041 ataagtccaa agataatggc tattgccata ggagaattag cttcatagcc cgcacccctt
    68101 gaaagagcaa gtgggagcat agcaaaaatc atagcaaaag ttgtcatcaa tatagccctt
    68161 aagcgtgatt ttccagcgat taaaagagct ttatcgggat ctaaaccttc atggcatttt
    68221 ttattagcta catctacgag taaaatagca tttttcccca ccataccaaa aagtaagatg
    68281 atggcaataa gtacaaaaag tgaaaaatta tgccctgtga taaaaagccc tatagaagct
    68341 ccgccaaagg ctaaaggcat ggttatcatg atgattaaag gcagaataaa actttcataa
    68401 agtgcggcta aaacaagata aattaaaaca aaagcaagtg ctactgccat agcaaaacct
    68461 tgcacggttt cacctaaaag attgataaag cctgaaaaag catagctaag acttggattg
    68521 ttatttaaaa ttttatccat attatctagt aaaagttttt gcaccgctcc taaggaaaga
    68581 tcattcactc cagctgtgat tttcacagag cggtttttat tgtaacgatt gatagttttt
    68641 aaatctttac tgtatataaa atccaccacg cttgaaagtt ctaaatttat accttggttg
    68701 tttttaatgc taatgcgctt taaagcttct atgtcttttt taaattctgg agcaaaactt
    68761 aggataatat catcttttga attgcctcta tccatgcttc ctacgctaag ttgcgagaaa
    68821 gaatacccta aaaccccagc gatatattga ggattgacat ctaaaagttt ggctttttct
    68881 ttgttgatgt gtaaggctac ttcatctttt gtagcattag cattatcact tatatctaca
    68941 atgcgtgcat tagtacctaa aatttctttt gcctgagaag cagcttcttt tagagtgttt
    69001 aaatcatctc ctaagattaa aaattgcacg ggatcatcaa tgcctgcacc ctctatcttt
    69061 ggaagttcta aaattttgat ttttaaactt tcatcttgaa atttttgacg atataaactt
    69121 actatggcac tttgtcttaa atttctttcg tctaaatttt taagtttaac ataaatttta
    69181 gcctttgtag catctttggc atcatcatag cctacaagta aaaaagcgta tttgacattg
    69241 ctatcatttt tgattttttc aagcaaattt aaactttttt ctttcatggc ttctaaactt
    69301 aaatcctttt tgctttcaag caaaacttga atttcactat catcttccat aggtaaaaaa
    69361 tcaagcccta tgcgagtggc taaagcaaaa gaaaacccta taaaaacaag agtggctagg
    69421 ataaatttta ctttattttg taaaatttta tagagtaaat tttcatactt ttgctctatt
    69481 ttttcaaaaa aagcttctgt tttttcataa aacttgtttt cttttggatt taaaaatctt
    69541 gccccaatac taggtattaa aaatacagaa accaaaaagc ttataactat cccacttgca
    69601 acgcttatgc ctaaggcatt gaaaaaaagc cctgatatag agttcatata agaaataggg
    69661 ataaaaacac aaagtaaaac tatacttatg cttaaaacgc taaaacctat ttcattgata
    69721 cctaaaaaag cagcttgtaa aggcggataa gtttttagtt ttttagcaat attttcaatc
    69781 actactatag catcatcgat aaaaattcct atgcttaagg ttaaagctat aaaagttaag
    69841 cggtttaaat catagcctaa aagatcgata ataaaaaaag ttgaaatgat agaagtaggt
    69901 atagctatgc aagcaatgag agttgcactt aaatttctta aaaataaaaa cacgataaca
    69961 agggttagaa aaatccccaa aaccatatca aaaatcactt gagaaaggtg cttgtggata
    70021 tttaagcttt tatcataaag catattaatg cttatatctt ttggaatttg tttttctaaa
    70081 ataggcaagg catttttgac atttttaatc atttcaaggg tgttataatt tgtgattttt
    70141 ccgagttcta aaagcacccc ttctttacct tcgtataaag cactttgttt ttcatcttca
    70201 taaaggcttg aaatattagc aatatcactt aaaaatactc ctgtttttat gcgaagattg
    70261 ctaagttctt ctaaatttgt ggcttcaaaa tagcctttga tgatatagtt atcttgattg
    70321 ttgttaagtt cacctagggc ttgtttaaaa ttttgacttt tgatgatatt tgctacatca
    70381 agggcgttaa gattgtattt tctaagttcg tttggtttta attctatgcg aatttggggt
    70441 tctaaaaacc ccttagcttc gatttttcct accccatcaa tcctttgcaa aaaaggcttg
    70501 attttatcat taatttcacg catgagttgt aatttatctt tagaatatag aaaaagtgaa
    70561 atagcagaac cagaatctga actgattttt tcaatttcag gcttagaagg taggcttaaa
    70621 gttcctattt tatcacgcac atcattggca gctacttcaa gatttttacc cagtttaaac
    70681 tcaactacac ttacactaaa attatcatat gcagttgagg ttatggtctt tactccatcg
    70741 atttcactta aagcattttc tatttcttta gtgacttttg attctacgaa atttaaatcc
    70801 ccatttatct tgcttgtgat ttttataaga ggtatggaaa cattaggaaa taaatttaca
    70861 ctcatgctaa aagcagagat tagcccaaaa atcataagag ctaagaaaaa cattagcacg
    70921 gtaataggtc ggtttatagc tagtttaaac atttttaatc tttagtgatg attctacctt
    70981 caccaaaaag ccctggtgtt agatttgtgg tttgcacttc agcataaatt tttcttgttt
    71041 ttacttctat acttggataa ataaggctga tttttccttt caattctgta ccattttgat
    71101 cgattttata aaagaaatca tcgcctaatc taactttatc tttatatttt tcatcaaaac
    71161 ttaaaatcag tttgctttgt ggataggaaa aaatttctat caaaggttga gctactcctc
    71221 ctactccttc gcccacttgt ataaatttgt ttgcgataat agcatcataa ggtgcgcgta
    71281 attctttttt tgccatgata tttttataat aagctatatt gatttttgct ttgtttaaat
    71341 ttaaattagc agcatcaaac ttagctttca tatcttcata gctttgtttg tctataacat
    71401 tttctacagc tttgattttt tgcatcctac ttttggtatt ttcgtattct acaagggcaa
    71461 gttgataaga attttgagca ttttgaagag ctattttttc actttcttga tcaagagcaa
    71521 gtaaaagttc tcctttgctg actttttgtc caatttctac aggaattttt tgaaccaaac
    71581 ctatgctttc aagggcaagt ttgctttgtt ttgatgcttc tacattgaaa cttgcgtaaa
    71641 tttcttcgcc aaaggcgcaa ttaaaaacaa gaagtaaaaa tagaattttt ttcattcttt
    71701 aacctttgaa ttaagatcta tacccgcatt aaaataataa tttgctttag taatttcaaa
    71761 ttcattttta gcaagctcta aatcgctttg tgctttaaat ttagcctcta aagcttgaag
    71821 atattctaca taagaaacaa gtcctgcttg gtatttttta tctacacttt caaaagctaa
    71881 atttgcagca tttaagctaa gattaagagc taaaatttgt tcttgtaaaa cttttaaact
    71941 tttgtctaaa taatttaatt cttctttatt ttttctctcg ctaaatcttg catttgcatt
    72001 ggctatttga acatttaaac gctctttttc aacttctttc gcccttgcat tgaaatcaaa
    72061 aattttccat tccataccta aaataaattg attaccttga gaatattttt ctaagaattg
    72121 atccgctaaa tttgcaaaaa gagctggaac ttttggatta taattgtttt tataaaagtt
    72181 aaaattatct tgaatataaa attttggaaa atattcagct tttgctaaat ttacactttc
    72241 tttagcaaga ttgatttgtt ctttagctat cattacttca tagttttgac ttttttcttg
    72301 ttgcggattt tctaaaaaag cattcccttg cactttaaaa tctgtatcgc ttaaaatttt
    72361 aatctctttt tgtatattgg caagttttaa ttcattttga ctgagctcta ataagcttaa
    72421 atggtattta gccttaatgc tttcaagttc atctttaggg ctaagtcctg cgtcgtaaaa
    72481 tttttgcaat ctttcaaaag ttgattttaa aaaagatact ttttgttgat tggctagtaa
    72541 aattttttca agacttaagg tgttaaaata aagtgtgatt gcatttaggg caaggtaatt
    72601 tttattttgt tctttgtcta aaaggcttaa tttttctctg ctttctaaag ctcttaaatt
    72661 agcctctcta gcacccccat caaaaagcaa aaaattaaga gaaactttag caaataaact
    72721 ttcttgtgga tcgataatga agcgatcttt attgttggct acataagctg agtttagact
    72781 aagagagggt aggtaatttc taaaagcttg ttctttgtct aaatttgctt gttcgctttg
    72841 catttgctta ataagatagg attcattatt ttgacttagt gctataaatt cgtgcaaatt
    72901 agaagctaac attgctaagg ggtaaagagc taaaaatata gctgatttta aatatttttc
    72961 aaacatagcg atattttagt atgctttata taaatttcaa ttgaagtttt ttatataaaa
    73021 taaaatttat ttgttttaaa cataaatttt gttaaaatcc tagctttaaa attttatatt
    73081 taggatgaaa ttttgtcggt aaaaaatatt agaaattttt ccatcatagc acatatagat
    73141 catggaaaat ctactcttgc agataggatt attagcgagt gcggtgctat tagcgatagg
    73201 cagatgagtt cgcaagttat ggatactatg gatatagaaa aagagcgtgg tatcaccata
    73261 aaagcacaat cagtgcgttt aaattataaa tttaataatg aaaattttgt tttaaatctt
    73321 attgatactc ctggccatgt ggatttttct tatgaagtga gtcgttcttt ggcaagttgt
    73381 gaaggggctt tacttgtagt agatgcttct caaggtgttg aagcacagac tatagctaat
    73441 gtttatatag cacttgaaaa taatcttgaa atcattcctg taattaataa aatcgattta
    73501 cctaatgctg atgttgaaaa agtaaagcat gaaatcgagc atattatagg tatagattgc
    73561 aaagatgcca tttgcgtgag tgcaaaaaca ggagtgggta taaaagagct tatagaaaca
    73621 attattacta aaatccctgc accaaaaaca gatgatgaag ctcctactaa ggctttaatt
    73681 tatgattctt ggtttgataa ttatttgggt gctttggctt tggttaggat ttatgaggga
    73741 agtattgcta aaaatgatga agttttagtc atgagcacgg ataaaaaaca tgtagttcaa
    73801 gatctttttt atccccaccc tttaagtcca attaaaactc aatctttaca atcaggtgaa
    73861 gtaggtgtgg tggttttagg gcttaaaacc gtaggtgatg tacaagtagg cgataccatc
    73921 actttggtaa aaaacaaagc caaagaagcc atagggggat ttgaaaaggc taaagctttt
    73981 gtatttgcag gactttatcc tatagaaacg gataaatttg aagacttaag agatgctttg
    74041 gataaattaa agcttaatga tagctccatc acttatgagc ctgaaacctc tttagcttta
    74101 ggttttggtt ttagggtagg atttttaggg cttttacata tggaagtaat taaagaaaga
    74161 cttgaaagag aatttaatct tgatttaatc gccacagcac caactgtaac ttatgagatt
    74221 tatcaaaccg atggagagct tataaaaatt caaaatccaa gcgaattacc gccggtgaat
    74281 aagatcgatc atatcaaaga gccttatgta aaagctacta tcattacccc tagtgaattt
    74341 ttaggaaatt taatcactct tttaaatcga aaaagaggag tgcaggttaa gatggattat
    74401 atcactcctg aacgcgtttt attggaatac gatgtgcctt taaatgagat tgtgatggat
    74461 ttttatgata aattaaagtc tttaacaaaa ggatatgcga gctttgatta tgagcctatt
    74521 gaatttcgtg taggggattt agtaaagctt gatattaaag tagcgggtga aaatgtcgat
    74581 gctttaagta ttatcgtgcc aaatgaaaaa gcgcaaagta aaggaagaga acttgttagt
    74641 gctatgaagg aaatagttcc tagacagctt tttgaagtag ctattcaagc aagcataggc
    74701 aataaaatca tcgcaagaga aacggttaag tctatgggta aaaatgtaac cgcaaaatgc
    74761 tatggtgggg atattactag aaaaagaaag cttttagaaa agcaaaaaga aggtaaaaaa
    74821 agaatgaaag ctataggtaa ggtaaattta cctcaagagg cttttttgag tgttttaaag
    74881 atagattgat gataaattta aaacttggct tgaaatttgc ttgtattttt aatacaattt
    74941 agaaaaatat ttttcaaaat attttttaag gagaaaaaga tgaataagaa aattttattt
    75001 tttatagcat tggctttatt tttaaatgct tgtgcgagca aacaaaatac ttttactcaa
    75061 gtaaatcagc tttctaaagc ttctcagtgt gttccttgcg agagttctag tggttttgag
    75121 gcaaaaatca aaggcctttt atatgttagc gatattggga tacaatgttg tgcaaataaa
    75181 agaactttag atacgggtgt ggctctcaaa aaagtctact tgcatagatt ttatgattta
    75241 aaagaagagc aaaaagtgct taatgccaat gggcaaaaat tatttgtaaa tcttgatttt
    75301 aatgctattt tttatgttta tttaaaacaa gagcttgaag caagaggtat tatcgtcctt
    75361 gatgataata aagccaattc accttatgta actaaaattg atcttgcttt tacgggttat
    75421 agtgcaaaac aagatagtct aggacttcat tcaagacttg ttggagtatt aagcttgagt
    75481 gatattaata aaaataaaaa attcacttta cgcaccaaac aagatgttca aggttttgaa
    75541 aatttaaaag atatcagttt ttacacacat ttactgatta aacagatggc aaataaagca
    75601 gcaagcataa tctcagagct ttgaaatgtt taaattgcgg agtttttact ctgctttgtt
    75661 tttgtcatca ttgcgctgaa gaattatcgg aattttcttt aggcgtaaga gaacttgaaa
    75721 aagattttaa agtttattct ttttataaat atcatgagat taaacatctt ttgcacgcta
    75781 aacataaatt ttatggttat tttgtatttc atttcttggc aaaattaagt ttttttaaat
    75841 ttaaaaattt tttttctgta aatgagcaaa ttaatgttat tcctttagat gatagagttg
    75901 aaaatttact ttattctcat tcagccatct tagcaaaata tttaaagaca gaatttatta
    75961 agcctatatt tggtgcctta catgcacaaa atcatctaaa gtattctgga aaaagtttaa
    76021 aatttagaca agacaataaa agaaaattta aacttttaaa aaaaattaac aatcctgtaa
    76081 ttttggtaga tgatattgta tcttcgggtt ctagtttact tgaagctaag caatttttag
    76141 aaaaaaataa aatttctgtt ctttttgcgg ttgttttagc tgatgcaaaa gtttaatatg
    76201 ctataataat agtttgaaat tgcgaaggaa aattgatgga gaatattttt aataaagatt
    76261 ctgatattga acttatagat atagaaaatt ctattaaaag tagttattta gattattcta
    76321 tgagcgttat tatcggtcgt gcacttcctg acgctagaga tggcttaaag cctgttcaca
    76381 gaagaatact ttatgctatg aatgatcttg gcgtaggaag tagaagtgca tataaaaaat
    76441 ctgctcgtat agtaggggat gttatcggta agtatcatcc acatggcgat attgctgttt
    76501 acgatgcctt agtaagaatg gcacaagatt tctctatgcg ttatccaagt atcgatggac
    76561 aaggaaactt tggttctatc gatggtgatg gcgctgctgc aatgcgttat actgaagcta
    76621 gaatgacaat tttagcagaa gagcttttac gcgatataga taaagatacg gtagattttg
    76681 ttccaaacta cgatgattct atgagtgagc ccgatgtttt acctgctagg gtgccaaatt
    76741 tattattaaa tggctctagt ggtattgctg taggtatggc gacaaatatt cctccgcata
    76801 gtcttaacga gcttgtagat ggacttttgt atttgcttga tcataaggat gctagtttag
    76861 aagatttgat gcaatttatc aaaggtcctg atttcccaac gggtgggata atttatggca
    76921 aaaaaggcat tatcgaagct tatcgcacag ggcgtggtag agtaaaaata agagctaaaa
    76981 ctcacataga aaaaaaatcc aataaagaca ttatcgttat agatgaactt ccatatcaga
    77041 ctaataaagc aagactcata gaacaaattg cagagcttgt aaaagaaaag caaatcgaag
    77101 gaatttcaga agttagagat gagagtgata gagaaggaat tcgtgttgta atcgaactca
    77161 agcgtgaggc gatgagtgag atagtgctta ataatctttt taaatctact acaatggaaa
    77221 gtacttttgg tgtgattatg cttgctattc acaacaaaga gccaaaaatc ttttctttaa
    77281 ttgaactttt aaatcttttc ttaaaccata gaaaaacagt gattatcaga cgaacaattt
    77341 ttgaacttca aaaagcaaga gcaagagctc acattttaga aggtttaaaa atagctttag
    77401 ataatattga tgaagttata gctttaatta aaaatagtcc tgataatact acagcaagag
    77461 attctttggt agctaaattt ggacttaccg agcttcaagc taatgcgatt ttagatatga
    77521 aactcggccg tttaacagga cttgaaagag aaaaaattga aaatgaactt gcagagctta
    77581 tgaaagaaat cgcaagactt gatgagattt taaaaagcga aactttgcta gaaaatctta
    77641 tccgcgatga attaaaagag ataaaaagca aatttgatgt gccgcgtatt acgcaaatag
    77701 aagatgatta tgatgatatt gatattgaag atttgattcc taatgaaaat atggttgtaa
    77761 ccattactca tcgtggatac attaaaagag tgccaagtaa acaatacgaa aaacaaaaac
    77821 gcggtggaaa aggcaagctt gctgtaacga cttatgatga tgattttatc gaaagtttct
    77881 ttactgctaa tactcatgat acattaatgt ttgttactga tagaggacag ctttattggt
    77941 tgaaagttta taagatacct gaaggttcaa gaacagctaa aggaaaagcg gttgttaatt
    78001 tgattaattt acaagctgat gaaaaaatca tggctatcat tccgactact gattttgatg
    78061 aaaacaaatc cttatgtttc tttactaaaa atggtatagt aaaacgcacc aatttaagtg
    78121 aatatcaaaa tatcagaagt gtgggtgtaa aagcgattaa cttagatgaa aatgatgaat
    78181 tagttactgc tattatcgtt caaagagatg agaatgaaga aacaggactt ttagatgatg
    78241 acagtcttaa tgatgaaaat acaaactctg atgaaaattt aattgaatcc attaagggta
    78301 aaatgctctt tgcagtgact aaaaagggta tgtgtattaa atttcctctt gcaaaagtgc
    78361 gtgagattgg tcgcgtaagt cgtggggtaa cagctattaa gtttaaagag aaaaatgacg
    78421 aattagtagg tgctgttgtt atagaaaatg atgagcaaga gattttaagt atcagcgcta
    78481 agggtatagg aaagcgaaca aatgcgggag aatatagact tcaaagcaga ggcggaaaag
    78541 gtgtcatttg tatgaagtta accgataaaa ccaaagagct tattagcgtt gtaattgtag
    78601 atgaaagtat ggatttaatg gcactaacaa gcagtggtaa aatgatacgc gttgatatgc
    78661 aaagcattag aaaagcgggg cgtaatacca gtggtgttat tgtggttaat gttgaaaatg
    78721 acgaggtggt tagcatcgct aaatgtccta aagaagagct tgaggatgaa ataagcgatg
    78781 aaaacttagg tttaaattta taatagttat ttgagttgga acgctttttg cttttttatc
    78841 aaataattac aatattttga aggtgtaaat atgaaaaaat tttattttat gctaataata
    78901 gcaggaattt ttgcagggtg tacagcgagt acaaacagta ctacagctaa aaatccaaat
    78961 agtccaagta cttcagctca agcatcggat attgttgttc aaaaagtgga taaagacgat
    79021 gttcgtgata ttattagaga agaaaaaatg ctagctcctg atgtaagcga aagtgagctt
    79081 agttttagtg ctgtaggaga aggaattgct cctcttaata ctgtttcaag tgctcaagct
    79141 ttagcattag caaaaagagc cgcaattaca gatgcttata gacagcttgc aagtaagctt
    79201 tatggcgtta aagttaatgg taaagatact gtaaaagatg caatgcttag aagctcaacc
    79261 atcactgcac aagtaaatgg tttaattaaa aatgctagca taattgatga gaattttaat
    79321 caaggccttt acagagttaa tgtagaactt aagattgatg cggacaagtg gaaagaattg
    79381 tttgcttatt aatatttttt agttttaaac taattgccca agatgaattt atattttggg
    79441 cagaactttc taacaaaaat ttaatccttt ttcatcaaag tcaaaattta tcccctgcaa
    79501 tgacgcgtag tgaaaatact ataagtgaat ttgcttgcga aatttcttat actgatgatg
    79561 atttaaaaaa acttccaaga acagaattgg gtatgataga tgatgatatg tctaaggcta
    79621 ttaaatttga ttttttaaat gcccataaag atgaattaag tgattgtttt atgggtgcta
    79681 gaatttctgt aaaagatata gtcaaaacag acttgttaaa agcacaaaat gaaacctatg
    79741 ttaaaatttt acctttgcgt tttagtgtag aatttggaga aagaaatgct ttgatttact
    79801 atcttaaaaa aaagtaaatt taagccgtat tttgctatta tttgctaaaa aatcaaaggc
    79861 tagttatgaa tttggtgatt gttgaagatg atatcaatat gcgaaaatcc cttgaaatag
    79921 ctcttgggga atatgaagaa tttcaaataa aatcttacaa atcagccaca gaagctttaa
    79981 aaaaaattga ttcagataca gatttgatta ttacagatat taatatgcct ggaattgatg
    80041 gactagaatt tattaaggct tgtgaaaata aatatgattt tatcattatg acaggaaatg
    80101 caactttaaa tcgcgccata gaagcggtac gcttaggtgt gaaggatttt ttaactaaac
    80161 cttttgatat agaaactttg gttgaggcta tcaagcgtgc aaaagttatt cgagaaaaaa
    80221 ctgcggataa aaaaataaaa aagcaagaag aaaaacaaga aaatggtttt ttctcgagtt
    80281 ctgataaatt agaacaagtt ttaagcttga gtcaaaaggc tgctaaaaca gatgcatcag
    80341 ttatgctttt tggtgagagt ggcgtgggta aagaagtttt ttcgcgtttt attcatcaaa
    80401 attctaaacg ctcccaaaag ccttttgtag ctatcaatat ggctgccatc ccttcaaatt
    80461 tgatagaaag tgagcttttt ggatttgaaa aaggggcatt tactgatgct aatgccacca
    80521 aaataggact ttttgaaatg gcaaataatg gaactttatt tttagatgaa ataggtgaaa
    80581 tgccttatga aattcaagcc aaactcttaa gagccttgca agaaaaagaa atcacaagac
    80641 ttggaagtac taaaagtatc aaaatagatg taaggattat tagtgcgacc aatgcaaatt
    80701 tgcaagataa gatcgataat ggagaattta gatcggattt gtattatcgt ttaaatacag
    80761 ttcctattaa tataccccct ctaagagaaa gaaaagaaga aattttgggc atagcgcaaa
    80821 aagttttaga aaatacttgt aaagagtatg agctcgaaat gaaaaaaata agtcaagaag
    80881 ctcaaaaagc tttgcttgaa tataattttc caggcaatat aagagagctt atttctatag
    80941 ttcagcgtgc ttgtatttta agcgagggat tagaaatttc agaacaagat ttatttttag
    81001 aagcaagaag tgtaaaaaaa gatgtaaaaa atttagaaaa agaattgcta gagcaaattt
    81061 tagagcaatg tgaatttgat aaagaaaaag caagcaacga acttggaatg agtatagaaa
    81121 atttaaacaa taaaatcaaa caatacaaaa taaaggaaaa ataatgtcaa aaaaacaaaa
    81181 aatagctata gttggagcaa caggtgcggt tggagaagag cttttaaatg tattagatga
    81241 gcttgatttt ccagtcgaga gtattttgcc tttggctagt gcaaaaagcg caggtaatca
    81301 aatagaattt agaggcaaat cttatacaat aaaagagctt accgaggatg tttttagaga
    81361 aaatcctgta gatatagctt tttttagtgc aggcggaagt gtaagtgaaa aatatgctaa
    81421 atttgctgta gaagcaggtg ctgtggtaat tgataacaca agtcatttta gaatggaaaa
    81481 agatgtgcct ttagtcgttc cagaatgcaa tcctgaagat attaaagaat ggaaaaaaac
    81541 aggtatcatt gcaaatccaa attgttcaac tatacaaatg gtgcatattt taaaaccttt
    81601 aaatgatgct tttgatttaa agcgtgtgga tgtaagtacc tatcaagcag caagtggagc
    81661 aggtaaggaa ggtatggaag aattggttcg cgcaatgcaa agcttttttg ctttcaagct
    81721 tgatgaattt gaagctcaaa catttcctca tactttagca cttaatttga ttcctcaaat
    81781 tgatgtattt atggataatg gctatacaaa agaagagctt aaaatgatca atgaaacaca
    81841 aaaaattctt cataaaaatt tagaaatttc agctacttgt gtaagagttc cagttttaag
    81901 aagtcatagt gaagcaatta ctatgcattt tgcaaaagaa gtagatgtaa ataaagcaag
    81961 agatatactc caaaatgcac caagtgttgt tgttatagat gaaccaaaag ataaaaaata
    82021 tcctatgcct ttaatgacta gcgatacaaa tgaaacctat gtgggtagaa ttcgcttaga
    82081 tgttacacat aaaaatatac ttcatctttg gtgcgtagca gatcaaattc gcgtaggcgc
    82141 tgctacaaat gcagtgcgca ttgctcaaaa atggttagaa ttagaaaata aataaaagga
    82201 gtaaaagagt gttagagaaa atttttgaat ccttgcttgt taaaagtcgt attgttacaa
    82261 ttttacccgt aatattcggt cttgtgggcg cttttgtttt attttttatt gcaagctatg
    82321 atgttttaaa agtaattctt tatacttatc aatatttctt tagcgctgga atcaagattg
    82381 atttacatga agatgtggta gctttgatta taggagctgt agatctttat cttatggctt
    82441 tggttttatt tattttttct tttggagtgt atgaactttt tattagcgag atagaagaat
    82501 ttaaacaaac caagcaaagt aaagtcttgg aggtgcatag tttagatcag cttaaagata
    82561 agcttgcaaa agtgattatc atggttttgg tagtaaattt ctttcaaagg gtattgcaaa
    82621 tgaaatttgc tactcctaca gatatggctt ttcttgccgg atctatttta gctctttgtg
    82681 tggggcttta ttttttacac aagggcggac attgaggctt gattatcttt ttttgatata
    82741 attaaaattt tggtttgtaa gggtgattat gaaaaagcta tttttgattt tattggcggt
    82801 aattaatgtt ttaacttttt cttatgcggc tcccttagat gaagttttta aagatgttga
    82861 agtttcgggc gttgtgcgct atagatacga gacgcaaagg gttaaaaaaa cagataataa
    82921 aaacaaaaaa cacaatgtta caaaccgcac cgaaatcact ataaaataga ggtaggatat
    82981 gtttcgttac ttgacaattt tttcgatttt tgttgtagcg ctttttggta taaatttgaa
    83041 gtcttttttt acttatactt ttgatgcaaa taaacaatac gatatggttc aagccaagga
    83101 tttatatttt aaaaataaat gcaatacttg ccatggagat aatgctgaaa aaagtgtcgc
    83161 aggttctaga gtattaaaag atatgtctcc tgaggatatt aaagcggcct tggtgggtta
    83221 tactcttgat ggtagtactt ctgctaatgc ttcacaaatg gctttttatg ctagaaattt
    83281 aagccacgat gatatggata atatcattgc atatatcaag ggtggaaatt ttgctgttga
    83341 tttgcaagtg aaagatttat tagaagaaga accaccgcaa aaaacgaaac ataatacttt
    83401 tttaaaataa aatattgagt ttaatttaat gaaaggatgg ataagatgaa aaaagttact
    83461 ttagttttta gtgccttagc tttggcaaat tgtttatatg caaaaacaat taatttagga
    83521 gtagtgttgc cattaacagg accagtggct gcttatgggc aagatgtttt taatggtata
    83581 gaacttgcta ataaattaaa tgctaagtta gataatggtg atgaagtaaa gttaatcgtt
    83641 attgatacta aaggcgataa acttgaaact acaagtgcag taaatcgtct tatagcgcaa
    83701 gataaggtta tagggattat aggagaggct accacgccaa atactataca agctatatca
    83761 attgtagaag ataaaaaaat tccactcatt gctccagtag cttcaggaga taaacttcta
    83821 gagggcaaaa aatacgcttc tcgtgtgtgc tttagcgata gttttcaagg ggataaattt
    83881 gcgagttatg ttacaaaaga attaaacctt aaaaatgctg ttgttattat agatcaaagt
    83941 aatgtttatt ctttaggact tgcaaaagct tttgaaaaat ctttaaaaga gaatggcggt
    84001 aaggtgatca aaaaacttgc aatcagttca ggcgataaag attttagagc tgtagtttca
    84061 cagcttaaaa gtttaaatcc tgattttgtt tatatgccaa tttatcatcc tgaagctgct
    84121 cttattgcta gacaagctaa acaaattggt tttgataaat tattagctgc tggagatggg
    84181 gttaataatc aaacttttat agatttgggc tcaactgctg taaatggagt ggtttttaca
    84241 gatagttttg actcaagtaa cccttctact gctcgtggta aaacttttat caatgaatat
    84301 gaaaaaataa aaggcaatgc aaatcttcca gctttttcag ctatgggtgc ggatgcttat
    84361 tatgtaatgc taaatgctat aaatgcttgc caaaatacac ttactagcga gtgtatcaat
    84421 gaaaaaatcc atcaaacaag caattacgaa ggtgtgggtg gaattattag cattgatgca
    84481 agcggtaatg caattcgtcc tgttgttata aaagaaatac aagatggcaa gcaagtttat
    84541 aaaactttaa tcaatccata aggaaaagta atgaaaaaga aaataatttt agcagcagct
    84601 ttggctttaa gtttacaagc aaaagaagta aatttaggag ttgttttacc tttaagtggg
    84661 gcaacggcag cttatggaca aagtgcttta gagggtataa aattagctaa tgaaatgcaa
    84721 agtactttag ctaacggaga taaaatcaat cttgttgttt tggatactaa gggagataag
    84781 atcgaatccg caaatgctgc tacccgcctt gtaaatcaag ataaggtatt aggacttatc
    84841 ggtgaaatgg ttactgcaaa tactttacaa gtaatgcgca tagctgaaga aaataaagtt
    84901 cctcttatcg ctcctgctgc aacaggagat aagcttttag aaaacaaatt atattcaagt
    84961 agagtttgct ttatggatag ttttcaaggc tcatctttgg caaaatacgc ttttgaaaaa
    85021 ttaaaccaca aaaaagctgt aattgtggtt gatcaaagta cggattattc tttaggactt
    85081 gctaaggctt ttgaaaaaga atttaaggct aagggtggtg aaattttaaa aactcttaga
    85141 gtaaattcag gcgataaaga ttttaaagct attgcaactc aaattaaaat tttaaatcct
    85201 gattttattt tccttccgct ttattatagt gaagcttctt tgtttgttag acaagcaaag
    85261 ctcataggtt taaatacccc aatgggttca gctgatgggg ttgcagatgc tacttttatt
    85321 aaattagcag gcaatgcaag cgaaggatat atttttacag atagctttga tgcaaacaat
    85381 cctacaaccc agctaagtaa agattttata gctaaatacg caaaggaaaa tcaaagtaaa
    85441 gaggttccaa attttacagc tatgggagcg gatgcttatt ttgtaatgtt taatgctatg
    85501 aatgcttgcc aaaatacact tacaagtgag tgtattaatg aaaaaattca ccaaacaaac
    85561 aattatgaag gagtttccgg ggttattagt atcgataaaa gcggaaatgc aactcgttct
    85621 gtggtagtga aagaaattaa aaatcaaaaa caaacttata aagatactat aaatccttag
    85681 gaaaaatatg gactctactt tatttttaca acaacttgtt aatggtctta gtctaggcag
    85741 catgtacgca cttattgccg tgggctatac catggtatat ggtgtattaa ggctgatcaa
    85801 ttttgcacac ggtgatatta tgatggtggg tgcttatata gcccttttgt tgataaattt
    85861 tttttctcca attatcaatc atttaaatca aacttttttt ggtagcgatg agcttggaaa
    85921 atatcttgtt gttatttttg cagctgcact tgtggcttct atgatctttt cttctattgt
    85981 gggaatattg atagataaaa ttgcctataa gcctttaaga aaagctccta gaatttcatt
    86041 attgataacc gcaatcggta ttagcttttt tttacaaaat ctttttaatg tgatttttac
    86101 ttcaaccgaa cagcaatttc cagcaccacc aatatttgaa actttggtta gcataggcgg
    86161 tgttagtaca actttaggtt cgttgcttgt acctttagta actctagtag taatgcttgg
    86221 agtccttttt atcctttata aaagtaaata cggcatagcc attcgtgctt tggcttttga
    86281 tatacaaact gtaaatttaa tgggaattaa tgcaaataga attattgcca ttgtttttgc
    86341 tttaggatct gctttagctg ctctagcagg gattttttgg tcgagtaatt actattctgc
    86401 ttatcctact atgggaactt tagttggact taaggccttt gcagcagcag ttttaggagg
    86461 gattggctct gtagtaggag cggttctagg aggactcatt ataggattga ctgaagttat
    86521 ggccgtggct ttctttccag agctttcggg ttttaaggat gcttttgctt ttatttttct
    86581 tgtgtttatc ttacttttta gaccaacggg aattttgggc ataaattttg aaaagagtag
    86641 gttttaaaaa tggtaaaaat taaaatttca gctttagttt atattgtttt agctattgct
    86701 tttattatgc ttgctccaca attttttgat ggctatggta ttggtatatt aaatcaaatt
    86761 gctatttata ttactttagc agtaagttat aatttaatca atggtgtcac aggtcagttt
    86821 tctttagagc caaatggttt tatagcagta ggtgcttatg ctgcggctct agtgctttta
    86881 agctcggaac aaaaattaga tttattcagt ttagaagacc caaatcctat cattttagct
    86941 ttgcatacaa attctttcat cttagcactt ttagtcgctg gctttagcgc ttgtgtttta
    87001 tctttaatcc ttgcttttgc tgtttttcgt gtaagagggg attatctagc tattgtaact
    87061 ttaggttttg gtattattat ccaaaaatta gcgattaatt ttccaagttg gacaaatgga
    87121 tctatgggct taaatggtat tcctttgctt tcaaatcttt attggacagg tggagtggcg
    87181 attatatctg ttattttgat tttaaatttg gtttattcta aatttggcag ggcaatgcaa
    87241 gcaattaggg atgatgaaga cgctgcaagc gctatgggag taaatacttt ttggactaaa
    87301 actcttgctt ttggaacttc tgctttttta gagggcgtag gtggaggact tttggtttgt
    87361 cttcttgcct ctgtttctcc agagcaattt ggttttgaat ttacttttat gttgcttata
    87421 attatagttt taggcggctt aggttctact acgggagcta ttttgggagc tattttgatc
    87481 ataggtggaa gagagtggtt aagattttta gatgaaatgc agattaaaat cgattttcta
    87541 ggtatcgata tgggttctat gccaggactt agaatggtgg ttttttcttt aattcttatt
    87601 ttagttatgc tttttgcacg acgcggaatt tttggcgata gagagcttaa ttccttcttt
    87661 aaaagacctt ctaaaaaagg acttaaataa tgattttgga gcttaagaat attactaaaa
    87721 aatttgggga agtgagagct attaatgaaa cttcttttca tattaaagag ggtgaaattt
    87781 ttgctctaat tggtcctaat ggtgcgggca aaacaacact ttttaatatt attacaggca
    87841 attataaacc aacaagcgga gaagtatttt ttcaaaataa gaaaattaat gatttaaagc
    87901 ctcataaaat tgtgcattta ggcatagcaa gaacctttca aaacattaga ttattttcaa
    87961 gtatgagtgt gcttgaaaat gttatgatag gttttgataa acaaatgaaa tatagcgttt
    88021 tggaagcttt tttgcattta ggtcgtttcc atagggttga gcaagaattt aaaaataaag
    88081 cttataagct tttagaagaa ctcggtatta gtgaatttgc agatgagaaa gctacgagtt
    88141 taagttatgg tcagcaaaga aaagttgaaa ttgcaagagc tatggctaca aacccaaaac
    88201 ttcttttact tgatgaacct gctgcaggta tgaattctag cgaaagcgat gaattagcag
    88261 agcttatttt aaagcttaga aaagactata agatcagcgt tttgcttata gagcacgata
    88321 tgaaatttgt taataggctt tgtgatcaag ttttggtgct tgattatggt aagactattt
    88381 ttgaaggaaa aataagtgat gctgtaaatc ataaagaggt aattgctgct tatttgggag
    88441 attttgatgc tagtagttaa aaatttgcat gtttattatg gcttgattga agcagttaag
    88501 ggtatagatt ttaaagtaga aacaggtcat atagtttctc ttattggctc taatggagca
    88561 ggaaagactt ctactctcaa tgcgctttta aatgcagtaa aacgaactgg agaaataaat
    88621 tttttaggtt atgatacaaa aaggcatcta actcatactt tggtgcaaaa aggtatagct
    88681 ttagtgcctg aaggaaggcg cgtttttatc aatcttagtg tcgaagaaaa tttaaaaata
    88741 ggtgcttata ataatagtga aaactatgag cacttaagag agcaaatgta taagttattt
    88801 ccaagacttg cgagcaaaaa acatgctatg gcaggaaatt taagtggagg ggaagctcaa
    88861 atgcttgcta tttcaagagc tttgatgagc gaacctaagc ttttaatgct tgatgagccc
    88921 tcgcttggac ttgctcctaa gatagttgga gaggtttttg atatcatagt gcgtttaaag
    88981 gaagagggca ttactatact tttagtggaa caaaatgctt actctgcgtt aaagataagt
    89041 gattatgctt atgttttaga aaatggactt attgcaatgc aaggtgaggc taaaaaactc
    89101 ataggcgatg acaatattag aaaaaaatat ttaggattat gatacagagg ttaggatatg
    89161 aaaaatatta ttaaaagtgt gggtgattta agaatttcta tagttttatt tttgcttttt
    89221 gctttatctt gtggcttggc aacctttata gagagtgctt atggtacacc tactgcatgg
    89281 gcaatggtat atgatagttt ttggtttgag tatatacagc ttttgttagg cataaattta
    89341 ttatttggaa tgtttcgtta taagatgttt gctctaaaaa aaatgccttt gatgattttt
    89401 catttttctt ttctttttat cttgcttggc tctgctatga ctcgttatgg tggttttgaa
    89461 ggtttattag cgattcgaga gcacactcaa aatgctttag ttgaaagctc taaaacctct
    89521 ttaagaattt ctactattaa agatggcgag cgttatactt ccgtaaatga tcgttacata
    89581 ggaaatttac cttttgcaaa ttcttttaaa ttaaatttaa atatgggaga tgaaaaagct
    89641 gttttaaaat atgaaaattt aattttagat gcagattata cttataaaga agataatgtt
    89701 tcttcaccct tgcttgtttt gactatttct gaaaaaaaat cccaaggtgc gaatttggaa
    89761 tttagatcag gagaggtaca aaatatcaac ggaattaatt ttgcctttat gaatgatgat
    89821 gtggctaaac cttatatcaa aatagataaa aatttaaaat taagctcaag tgaaaattta
    89881 agcgttttta acatgaaaaa aggcgagaat tcaactctta aaattggcga aaaggcagat
    89941 gctaaagatc ttagattata tagtttggat aatttaaatt ttgtagtgaa atttgcttct
    90001 ttacatggag ctcaagaaat tcaaggtgtt aacaggccgc aagatgaaag cttttggcta
    90061 tggtttaaat cagcttggtt agaatttgca agaactataa tgatatcaag ctttggggag
    90121 ccacaaaact ggaaagcttc atggcttacg aattttaaag attttgctat gagtaaggat
    90181 tatcaagctt tggaattaaa aggagcacat gcgctaaaac ttcaattaga ttataagaat
    90241 gaaagtaaag aattttatgt atttgaatac aataaaccta ccgtagtaga acttgctggg
    90301 caaaaattct ttatttcttg ggcgcttgca tatgagcaat tgccttttga aatttattta
    90361 agagattttg ttatagatcg ttatcctgga tctatgtctc ctgcttctta tgcaagtgaa
    90421 attacggtta aaaataatga agataatttc gattatagga ttttcatgaa taatgtgtta
    90481 gattataagg gttatagatt ttatcaaagt tcttacgatc aggatgaaaa agggacgata
    90541 ttatcagtca ataaagaccc gggtaaaatt cctacatata taggttattt cttgctttgt
    90601 ttaggtatgt ttttaaattt cttaaaccca cattcaagat ttagaactct agcaagactt
    90661 atcaacaaag acgctctgaa gcatactgct agtgttttgg ctttatttgt agctttattt
    90721 ggagcagata aaatgcttgc tcaagattta aatataagct tagagcaaaa tatacctata
    90781 gtggataaag cacatgttaa agagcttaaa gcccttatcg tgcaaaaatc tgtagatggt
    90841 agaatgatac cttttgatac tttagctaga gaaattttgg aaaaaattca taagagtgca
    90901 gactataaag gacaagaagc aagcgctata atgctttcaa tgcttatcaa tgtagattta
    90961 tggcaaaatg aagcctttat tttaatgcca agcaataaaa atgttcgtga ggctatcgct
    91021 gaaattttag aaatttctcc agaattaaaa tatgtcaaat ataaggattt ctttgatgct
    91081 aataatcgtt acaaacttca aaaatatgtg gaaaatgcta accgcaaaaa cccaaatgct
    91141 agaggggtat ttgataaaga aatcatttat ttagatgaaa gagcaaatgt tgtaaatttg
    91201 gtttttagtg gagaactttt taaatttatt cctatacaaa atcatgacaa taatgcatgg
    91261 ttggctcctt tttctgctat tacaacactt aaggatgaag agggtcagtt tgtttttaca
    91321 cttataaaaa attatttttc ttctgtggac tcagcttttc atgatggaaa ttggacaaga
    91381 gctaatgaag ctttaggttt tatcaaacaa tatcaagaga aaatagggca tgaggttatg
    91441 cctaataaaa caaaagtaga gatggaaatt ttttcaaata aagctgaaat ttttgtcaaa
    91501 cttgctcctg tatatttaat cgcgggattt ttattgttga ttgttctttt gattaaaatg
    91561 gttgcgccaa aacttaaaat ttctcttata tttaaagtca tttatatttt aaatatttta
    91621 gcctttatag tccatactgt aggacttgga ttgcgtgctt acttagcaga tcatgctcct
    91681 tggagtaatg gatatgagag tatggtttat atagcttggg ctttatctct ttcaggaatt
    91741 ttcttttcta gaaaaagtcc gattgcttta tctttgactt ctatacttgc gggtattgtt
    91801 ttagctgtgg ctcacttaag tgagatgaat ccacaaatta caaatcttat gccagtgctt
    91861 aattcgtatt ggcttagtat ccatgtgtca gttattactg ctagctatgg atttttagga
    91921 ctttgttctt tgcttggaat ttttacttta ttgttaatgt gttttttaaa agaaaacaat
    91981 caatacaatc aaagtatttt aagaaatatc acagaagcaa ctcgaattaa tgaaatgtca
    92041 atgatttttg gactttgttt gcttactgtt ggaaatttct taggtgcaat ttgggccaat
    92101 gagagttggg gtagatattg gagttgggat ccaaaagaaa cttgggcttt ggtaagtatt
    92161 ttggtttatg cggctatttt gcatattaga atgattccaa aatattctaa tcaatttacc
    92221 tttgcattat ggagtatgtt tgcttattgg gttgttatta tgacttattt tggagtaaat
    92281 tatttcttag taggtttgca ttcttatgct gcaggagaag ctgctcaaat tcctagttat
    92341 gtttattggg gagttgtgat tatgattgtt ttagcattac ttgcaagaag aaagcgtgag
    92401 tttgtaggca aactttaatg agccatattt tttgggtgat tatttgcacc tctggagctt
    92461 tgctcctctt tttgagtttg atagcttatt tgattctcag tgataataaa aagaaaaata
    92521 aaaaacaaaa aaatactgag aatacagcta aagcccgcaa atttgataat gatttaaata
    92581 agatgatagc agcggcgagt gatttaaaat atagcgatcg tgatttaaag gagttggtaa
    92641 agctctttgt tcaaacacat aagctaggct ctaaaacttc taaagaatta gatgaaaaaa
    92701 caaaaaataa attagaattt gtatccgctt tagctgctaa cccaaaagct agccctcaaa
    92761 ctgtaagttt tttaaatcaa gagcttaaaa aaatttctgc ttcttacaaa aaagaaatcg
    92821 atgcctatga gcagatgggt ttagcaaaaa gaaaaatcaa agaagagaaa taaaaccaga
    92881 tttaaatttt ttaagcgtat gtgtttttaa agaaattaca agcaattatg gtggagttta
    92941 tattttgata aagagataag agaagagata ttacagagag aaagcatatt ttaaaggcgc
    93001 taaaggacga gagtttgggt gatgatattt gagattggtt gcaagatgca agcagaaaat
    93061 atcttgttgt tttacatacc atgataaatt atagtgtaga aagctatgga ttatttggag
    93121 atgaaagaga ggtgggtagc tttacaagcg taggacacaa aggtgttgat ggtggataag
    93181 ttaaaacaaa attttattat cacatctaat aattacgcgg acaaaaatat gcctatcaag
    93241 gagtaagtat gcgtttttat aaaatgcttc tggctttaat cttaagtaca aatttagcca
    93301 atgcttatga tactactatt atttataatg aagataaacc tatttttaaa cttgattttt
    93361 acaataaagg agaaaatacg gttttttggt gaaactgttg cctcttccta tactttaaat
    93421 gagatccaaa gaaatgaaat cattcgtgcg actcaatttc gggctaatat tataggagct
    93481 agtacaatca attcttctcc cattcctatc agtgtaagta cctttgatat tccaaatgcc
    93541 aatgcattat cttatgattt cttttctaat cctatattta atagggtatt gcaaggagaa
    93601 agtatagata ctattagaca agaacttata ggtgtatcag aagatttttt tactaaagca
    93661 agtgtagaat acttagggca tattaatatg ggaaagcttg attggtatat agctttctca
    93721 tcctactacc ctacctaaaa atgggaatca gtttgatact ttttctacct tcacccatga
    93781 gctttttcat gctttaggcg tgttatcttt agctggtagt tgtggaggaa atttgggaca
    93841 atgttttaac ggttttttaa acagttttag tgatcattta tatgatctta atggagtaaa
    93901 agctcaaata ggaatgagaa tagttaaaac ccaagcagag gtagaagaag ctaagttaaa
    93961 aggagagacg gttttcttag ttaaggacga tggtgtttat attaatggca gttttagcaa
    94021 tgcttcgggc aatgtttatt ttaaaggaga aaatgtcgca gaagttatta aaaatgctaa
    94081 actaggttat gatggggtta atggtattcc tatcaatgct tgggaaggga ttatattaga
    94141 tatgtctcat attgagcttg ataattcttt aatgagtcat caaagttggc gtaattataa
    94201 cttctatatg gaagcagaat tagccttgct tcaggatata ggttataatt ttgatagaaa
    94261 actttattat ggagattcta tttacgaaag caatctttta aactggcaaa gcgatcatgg
    94321 ttattatgct agaaaagatg gcaaatggct tataggagaa tacaatccta cagaatacgg
    94381 agtgggtttg catatctatg gtaaaaataa tatagccact caaagccatg atattttatc
    94441 aagtggcgta gctgcaagtg gtattcgtat agatggatcg aataaccaat tgattatagc
    94501 caatgatact aaggtttata ccttagggga ttattctaat gctttattaa tcgcttatgg
    94561 aaaagatcat gttattgaac ataatggaga attaaaagct acaggtaaag agggtatagc
    94621 catcaatata gattttgggg ataacactct aggcaatgct gaagaatacc gtggctctta
    94681 tatacatcaa atgtctggta ataatcaaga cgatcttgcg gagtataacc tagatggagc
    94741 cttggttaaa agcttaaatc ttaatgctgc tagctctact ataggttctt tagcttccat
    94801 ttatatagct gataatgctt atgtaaacac tatcaacata gcacaatggg ctaaggtaga
    94861 aggagatatt atttctaatt gggatcctaa taatgaaaaa ttagcaaatc aatacaaaga
    94921 tagcttttat acagatctta attttggttc tgactctagc ttatcaagag ctgctttcaa
    94981 tgctttagat aatacttgga gtgttaaagc taatgtatta ggttatgata attttaaaat
    95041 gaatgttaat gagaatctta atctacaagg tagtgctttt gtttatgatt taaacaataa
    95101 agcccatttt agcctactcg gtgcagatgg catcaaccct tctttattat atattaaaaa
    95161 caatttcact caggattcaa atgctatcct aactgcaggt attaatgcta atggacaaag
    95221 tctagtatat gtaggaggta atgctaattt agtaggagct tttaattttt acatgttaaa
    95281 agacttttat aaagataaag tagtgttaga tcctgattta attagcgcaa atcaaattca
    95341 aggtgctttt aattctattg tttatgatag tagtcttgat ttttctccta ctttaaattt
    95401 tatctatgat gcaaatacaa aagaattagg agttgttcgt gattatactc cttatattaa
    95461 aaattcaagc gatatttctt tagcttatgc tttaaattct ttagctcaga atggaaaata
    95521 tgaagatatt gctttgcttt ttaaagaatt ggactttgct acagatgcac aaaccatagc
    95581 tcagggttta aacgagctta atgctaaagc ttatttagac agtgctaaaa tttctttaga
    95641 tttccaagag gagctcaata aagaagccct aagcgaatat gccaatgaat ggcaaagctt
    95701 cgtaacccca tttggaactt atcaaagctc aagagctaat ggagattttg atgcttataa
    95761 aggctatgga ggtggagtaa aggcaaagct attaagggat ttgatagttt caatttagga
    95821 tttaatttgg tgttaaatac taataatata gatatagatg ataccttagc taatacaaaa
    95881 accacagggg catatgcagg cattttttct aaatatgatt tagaagattt ttatctttta
    95941 ggaagtttta gaatgggtta tgagcatacc aagcttaata gaaatgtaaa cataggagct
    96001 tttagtgcaa attataattc taagtttaat tcttatctta ttagtgaaat ggtaggtata
    96061 ggtaaaagct ttaatcacta tggggtaagc tatggacctt tagcttatat agaacacagc
    96121 ttcttacatc acttcgctat caatgaagaa aatcagaact ctacagcttt aaatattgat
    96181 tctaaaaatt tccatgcttt aaattctttt atgggattta atgtaaatta tgaaaaaggt
    96241 atgagtgaca aagctattgt gaatttttat ttcttgggtg gatggaatca ttatttctta
    96301 gactctttaa aaaacaatgc cagctttaaa gatgcaagtt taaataaatt ctataccaaa
    96361 agcaaactaa gcaatcaaga ttctttatac ctacaaggag aaattgattt tactcataat
    96421 caatctttct ttacaagatt aatgctttca agtgatatta aagataatat agactttagc
    96481 accaaacttg aagtaggagc taagttttag taaaacacaa aaaaataaag ccttgtgatt
    96541 atgatattat taggctttat tttatacttt taaacttaaa ttgttttttg ttgatctttg
    96601 ttttatattt atccttttta aattttcaag taatctttgc taatgtttaa agagttttag
    96661 tttttgcaaa ttgctatata taaaagtaag gattttaaag caataaaagc tataaaagct
    96721 acttaaagat tatatttata atacaagaaa agataaaatc atttatttag acttgcaaag
    96781 tgatgtagaa aagtataaaa gagaatgaaa attttttaaa tacagcttaa tttttaattg
    96841 tttatcgttg ataatctttc atctttttat aagcatataa aatatatgta aattcttaga
    96901 agaaattttt tgcacatatt tttgaattga tcaaaagata ttaattacca ttcttacaaa
    96961 gttttgattt attggctttt atttgttaag tgagataaat tgatataaga agtaatggtg
    97021 cgctcaagag gattcgaacc tctgaccttt tgaaccgcaa tcaaatgctc tatccagctg
    97081 agctatgagc gcatcttttt gtatttttaa agatgtaatt gtataaaaaa ttttcttaaa
    97141 attaggttat ttgtttaaga ttttatcttc aaattctaat tctttctttc tttttttgcg
    97201 ataaacgatt aagccactta ataaaataaa acatataaga gcaaaaacat accaagttgc
    97261 atgtttaaca ttgcttaaaa acaaatcatt agtattcata ccgaaaaaac ctactatcag
    97321 attaagaggt aaaaatattg cagataatat gcttaaaaaa tataagcttt gattcatttt
    97381 ttcattttta attgcactca ttaataaatg aagctcgttt aatctagtga taatttcttt
    97441 gttgtttttt aatgtaaccc cgacagcaaa gataataggc tttaaagctt ttttatgcgg
    97501 gcttgtccct gctaataaat tcaatgcctc atcaagcaag gaaaggtttt ttaaattttt
    97561 attgattttt tgttttagga taaaactttt tttaaagaaa tttttgatca aattgccttt
    97621 taaaagtata ttttctttgc gttctaaaat gcgttcaaag taagcatttt catttttaca
    97681 atcctctaaa atagcccgaa tggtgcttaa aaaatcattt aaagaaaaag gtttaaattg
    97741 agcattttca agtttgaaaa ttgtatcatc ctcaaatcca aaaacactga aattcgcctt
    97801 ttttgttttt gagctgtaag aatttaaaat caaaattttt tgccctaaaa aatccatata
    97861 taaagtattt aaatttttat ttgcaagaaa tttgcttaaa ttctcatcgc ataccattgg
    97921 ttagcctttt ggcgtaaaat tcgtatttga attttttaaa ttcagacttt tttatcgcct
    97981 ctcgtgcttg cgctactaag gttaaataat aatgtaaatt atgcaaacta gccaagcgaa
    98041 aaaaggttaa ttctttagct ttaaaaagat ggtttaaata tccgcgtgag aaattacgac
    98101 aggtatagca taagcattca ttatcaatgc tttcatgatc gttgataaat tcagctcttt
    98161 tgatattaaa tttgccaaaa ttggtgaaaa aagttccatt tctagcattt ctagtaggca
    98221 taacacaatc aaacatatcc acccctcgct ctatgttttc aaccaaatcc tcaggagttc
    98281 caacccccat aaggtagcgg gggcgatttt catctaaaaa agggtttaaa ttttccacag
    98341 tttcatacat aagagcattt tcttcaccta cgctaagtcc tcctatagca agtccatcaa
    98401 aatccatttc attaagggct aaagcacagc gtttgcgttc ttcataatcg gttccccctt
    98461 gtatgattcc aaaaatattt tgttttagac ctagtccttg aatttgcatt tgtttgtgat
    98521 aatcaatcgc ttcttttgcc cattttatag ttctatctac tgaaacttta atgcgttctt
    98581 ttgtagcagg aagggcgata agatcatcta gtatcatcat gatatcacta tttaaatcat
    98641 attgagtatc taatacgctt ttaggagtaa ataaatgctt agaaccatct atatggcttt
    98701 taaattctat accctcttga aaatgtttag aattagcaga aagtgaaaaa gcttgaaagc
    98761 caccactatc agtaagaaaa cttctatcaa attttgtaaa gccgtgcaaa ccaccaaaat
    98821 gttttacgat tttagaacca ggccttaaat acatatgata agtgtttgct aggatgattt
    98881 ttgcattaag ttgttcttta agatcaattg catcaaggct ttttacagca cctactgtgc
    98941 ctactggcat aaaaataggg gtttcaaaag tgctatgagc tgttgttatc tcacatactc
    99001 tagctaggtt gtctttatgc tttaatttaa attccatttg ttataatttc ctttttggag
    99061 tgcaaaatga atcatatttt aataataatt gatggtattt tagcaaagca tttcttagaa
    99121 aggctttgtt ttgaaaaagg cttgggatat ttttttacca tagtttgcca aaatgaagaa
    99181 aatataaatt taggtgcaaa tagcgaatat attgaatttc atcattttga tcccactagc
    99241 acagcccgcc ttgaaactct tatgaataaa tctttcaaac aagcttttat ctatatgcaa
    99301 gatgaatttg aaactaaaaa aacctacgaa gctttgcgtt ctttagatgc aaatttagag
    99361 attgagatca tggatttttg gggtttgaat attaatgatg ttcatacaaa tttagccgat
    99421 gctagaatga ctttgagccg aagatttatg gattttttgc ctgatattgc tttaacggct
    99481 tattgtgttg gattgggtgt tggggaggtt atggaagtta aaattcctgc agggtcgatt
    99541 tttgcataca ggcatattag ctccatacag caaaaaagat ggcgtatagt actcatttat
    99601 agaaattcta aaatttattt tgttaagcca tcttttgttt tacagcctaa cgacagcatt
    99661 ttaatcgtag gcgatcccgc tgttcttcaa agtatttttc acaatatcag aggtaaagca
    99721 ggacaatttc cacttccttt tgggagcaat atcttcactc ttattgatat gaaaaaaatg
    99781 agtgaagata cacaagaaag attactagat accactttgc aattggttaa aaaaagcaat
    99841 gctaagaaat tttttataag ggtgcttaat cctaaattgg gtgctttata tgataaaatg
    99901 aagcaacttt cagatgagca agaaagtata ttttttgatt tttttaatac agattttgca
    99961 aatttaaatt ctttcttgga aaataatgat ataggtatta ttcttacaga ttttaaacat
   100021 tttgagcaag agaaaaaaac tttttttgaa ttgaaaattc ctattttgaa aataggtgag
   100081 ggtaaattcg aaaatattca aaatgctgtt attttaagta ctaatgaaac cgaacttgaa
   100141 aataatgcaa atgtgatcac agatcttagt aagcaacttg attttgatat tactttgtat
   100201 tattataatc ctaatttgca aaatactaca gatatggagg agtattttgg aagtttatct
   100261 aagctttacg ataagaatat ccaaattata agcaaaaatg atgaaaatcc tattttatct
   100321 ttatcttacc gtgcagattt gttgcaattt gtgagttttg aaaaagagct tttggaggga
   100381 gaatttagca aaagtttaag cactaatctc aatagacatt attctaaaat gaggcaaaat
   100441 tatcaacttt tcatacctgt agaatgagaa tcatttaagg cttatgataa agtattattt
   100501 ttttaggagc ttgtttttta gtgtttcaaa aaagattttt attttaaatt ttcttagctt
   100561 tatggcttag aactaagaaa atgattagcc ctaatttgct agaatagatt taatttcaaa
   100621 ataaaagtag aacaatgcaa ataaatgtag atttaaaaga aaacgcttac aaggtttata
   100681 tagacgagtt ggataattta gaattagata ctaaggtttt tatactttca aatcctaaaa
   100741 tttcaggact ccatttaaaa acactattgt ctaaaattaa ggctaaagag ctttttatag
   100801 cgacgataga agatggtgaa gaatacaaaa atttactcac tttggaaaaa attttaaatc
   100861 aaatgtttaa ttccaagctt aaccgaaaaa gtatattgat aagctttgga ggtggagtaa
   100921 ttagcgatat gggtggattt gcggcaagta tttatcaaag ggggattgat tttatcaata
   100981 tccctactac gcttttagct tgtgtggatg ctgcagtagg tggcaaaaca ggagttaata
   101041 atgcttttgg aaaaaattta ataggcactt tttatcagcc taaagctgtg tattgcgaaa
   101101 gtgaattttt aagaacctta ggtagaagag aattggccgc agggatggct gaatttatca
   101161 aaatggcagc aatgtttgat agggatttgc ttgaatttat agaagcgatt gataaggaaa
   101221 gttttttaaa tgcgacttgc gaaaacgaaa tttttactca aattatttct aaaagcgtag
   101281 agcttaaggc aagagttgtg gagtgtgatg agaaggaatc aggcttaaga atgcttttaa
   101341 attatggtca tacctttgct catgtgatag aaaattttac agattataaa caatatttac
   101401 atggtgaagc agtggctata gggatgaata tggcaaatcg cttggcttta aaattaggat
   101461 tattaagtaa agaagaatgc gagagaatag aaaaaatttt acttcaattt aatttgccaa
   101521 cgcattataa aatcgaaaac atcaacgagt tttatgaggc ttttttcatg gataaaaaaa
   101581 gtgctaatca aaaattaaat ttcattcttg caaattcttt gggcaaggga ctcataaaag
   101641 gtgatattgc caaagaaatg atattggaaa ccttggaaga atttcaatga gaaaaatcct
   101701 tcttttactt tgctttagtc tttttgcttt tggcgatata aatcgcacta ttattaataa
   101761 tatcaatgaa aaaataagca atttagacac tgtcattgga gctagtattt gggatgtacg
   101821 ctatgaaaat tttatcaaat atcaagatat aaatgatgaa cttattatct taaatttaga
   101881 attaaaaaaa atagaagatg tgcatttaca agatgaatta aaacgaaaaa tagcaacttt
   101941 agaagaacag cttaatgtcc ttaaagagta taaagaatta aactttgccc atagtcttag
   102001 tgcacctgaa gatatagaaa ctttatctaa gctcaccaat ccttttgcga ttattggggc
   102061 tttttctcat attaaaaaat taagaggaga aaaagaagaa tatgccttta aatttaatga
   102121 ttttaagaat ttggtagaaa aaatcagaga aaagaattta gaactcaaag aattagtcaa
   102181 tctagaatca aatatcgaaa atatagaagc attaaaagca tcagataaaa aacttgaaga
   102241 atttgatcaa gccttaaaat ttgctagtgt ttcttattct gtttatgaaa aaaagattga
   102301 tgatgaaatt gcaagagtaa gtgctgaaat caaagcgcag ggtttaagag cgattaatat
   102361 agtcatagct attgttattg ttgtagctat tgcttttatg ttaaaacttg ttgctaaaaa
   102421 atacataaag gataatgaaa gatactacac agcaacaaag attatcaatt ttattaacct
   102481 taatatcatt tttcttattt tgctttttgc ttatatagaa aatataacct atcttgttac
   102541 tatacttggt tttgcatcag caggcttagc tattgctatg aaagatatgt ttatgtctat
   102601 gcttggatgg tgtgtgatcg tttttggtgg aagctttaga gtaggggatc gtgtaaaagt
   102661 ttttcaaaat gatactactt atgtggggga tattatagat atttcttttt tgcgtatcac
   102721 tttatatgaa gatattacac ttgaaactta tagtaaaaat cgtagagcag ggcgtattgt
   102781 tttcataccc aataattatg tttttacaaa tcttatttct aattatactc atcatggaat
   102841 gaaaacgatt ttagatggta tagatattag cgttactttt gattctaaca tagaaaaagc
   102901 tcaagctata gttgaagaag ttgtcaaccg cctagcaaag ggctatacag aactagccaa
   102961 aaaaacaatg aaaagactgc aaaatgaata cagcataaga aatcccaaag tagagcctag
   103021 attttttgtc ttttttgaac attgggggat gagaatatct gcttggtata tgacaaattc
   103081 atacgcagca ttgatacttc gaagcgctat cagtaaagag attattaaag aatttaacaa
   103141 gcatgaggat attaaaatag cttatccatc tcaaaattta tatttaggaa atttaaatca
   103201 agctcctttt gagactcatt ataattctat gcattttcat acaaaggata acaattgaaa
   103261 gaaaaagttt tttttaaaac ctttggatgt cgcaccaata tatacgatac agagcttttg
   103321 aaaagctatg taaaagatta tgaaatcgta aatgatgaag aaaaagcaca gattatcgta
   103381 gttaattctt gcactgttac caatggtgca gacagcggaa taaagtctta tattaattcc
   103441 atgcaaaaaa agggtgttag agttatactt acgggttgcg gtgcagtgag taaaggcaaa
   103501 gaacttttgg ataaaaaaca agtttttgga gtgcttggag catcaaataa agataaaatc
   103561 aatgaatttt tgggtttaaa aacaagtttt tacgagcttg gaaatttaaa ttttattgat
   103621 aaagatatag tttgtgagta cgaaaatcac accaaagcct ttgttaaaat tcaagaaggt
   103681 tgcgattttg cttgttctta ttgcattatc cctagcgtgc gtgggaaatc aagaagtgtt
   103741 gatgagcagg ctttgttaag gcaggttgaa attttaggag caaatggcta tagcgaagtg
   103801 gttttaacag gtacaaacat aggttcttac ggacttaaaa atggaacaac actaggtaag
   103861 cttttgcaaa aaatgggtca aatttcaggt ataaaacgca taagacttgg tagtttagag
   103921 cctgctcaaa ttgatgaaag ttttttagaa attttagatg aaagatggat ggagcgacat
   103981 ttacatatcg ctttgcaaca tacaagtgaa aaaatgcttc gcatcatgag aagaagatcg
   104041 catacagata atgacttgaa gctttttaat accatagcca gtaaaggata tgctttgggg
   104101 actgatttta tcgtagggca tccaggggaa accgaggagc tttggcatga ggctttaaag
   104161 cattttcaag aatttccact tactcatatc catgctttta tttttagccc tagaaacaac
   104221 acgcattcag ccaccatgaa agatactata aatggtgctg tggctaaaga aagattaaat
   104281 actttaaaag ttattataga aaataataac tatgaattta gaaaaagagt taaaactcca
   104341 cttgaaattt tagttgaaaa tcaaaaagat ggtttttttg aaggttatga tcagtttttt
   104401 aataaaataa aaatcaaaag cagtaaagat atagcaaaag aatggctaaa attagagcga
   104461 tatgaagtgc aagaaaagca taatttcgca gacttagagg gtaaaaaatg aaaaacaaaa
   104521 aaattatatt gatatctttt cttatcttgt gtttgctttt tggaattttg tattttaaaa
   104581 atgaacctaa atacatagat gaaaatcttt accaaagttt attaagtcaa aatttaatcg
   104641 aaaaagcagt gattgataag gatgaaattt ggcttaaagc taagggtgag agctatgtga
   104701 tcgtaaaaga tggtgtagat attaaaaccc ttttatcaaa agttcctgtg gaaatcaaaa
   104761 aagacagtac tttgtgggta ttttttgtta tatttgtatt tcttatcgcg cttttattaa
   104821 gttttgttta ttttgcacga aaaaaagaat tagctaagta tcctatatct agtaaaactc
   104881 aaacccaaac ttctaccaca aatttagaaa gttccaatat aaaacctgtg atttctaata
   104941 tcacctttaa tgatgtagca ggcgtgagtg aagtaaaaat ggagcttagt gaacttgtgg
   105001 attttttgca aaatcctaaa aaatacaaag aatttggtgt aaaaatgcca aagggtgttt
   105061 taatggtagg tcctccaggg gtagggaaaa ctttgattgc taaggcggtt gcaggcgaag
   105121 caggggtacc ttttttttat caaagcggat caagttttgt tgaaatttat gtaggaatgg
   105181 gagctaaaag agtaagggag cttttttcta gagctaaaat gatggctcca agtattattt
   105241 ttattgatga aattgatgcg gtgggtaaag caaggggtga aatgtctaat gtcgaaagag
   105301 atagcacctt aaatcaactc ttaacccaaa tggatggttt tgaagataat agtggtgtta
   105361 tcgtaatcgc cgcgactaat aaaatcgagc taatggatcc tgctttactt cgttcagggc
   105421 gttttgatag acgcattttc ttatctttgc cagattttaa agataggctt aaaattttag
   105481 aaatttacat gaagggtaaa aataacaata ttgatttaaa taaaattgca aaagcaagtg
   105541 taggttttag cggtgctgga cttgaaacct tagttaatga agcggctatc aatgctttaa
   105601 gaagaaatag ttctttggtg gaagaaagcg atttttatgc tgtactaaat aaggtgcttt
   105661 taggaaagaa aaaaaatcta agttttaatg atgaagaaaa gggtatacaa gcgacttatc
   105721 aggccgcaaa agctttgagt gcgtattatt ttgatatagg atttgagaaa attactctta
   105781 ttgaagatcg ttttaaggaa tacgagcatg ccattcgctc aaaatcagaa cttatcaatc
   105841 gcattaaggt ttatttagca ggctctagag ctatgagttt gatttataat gaaagctata
   105901 caaactcaca gaatgatttt ttaaaagtta aagaattgct tgattatatg ataaactttg
   105961 gtatgcttga agaaccaaat ttaaacgaaa ttaaaaggga gctagatgag tttttattcc
   106021 ctttaaaaga aaaaatttca acgcttgcta aaattttact tgaaaaagaa aagatagagt
   106081 ataacgatgt taaagaagta gttcaggttt aaagtatcta tatggcttta gattttgtca
   106141 tctatcttag actttaataa attgttttag tcgtcatatt ctgtatataa aatcgtacca
   106201 ttaaaatcaa tatgtacttc tatattgtta gtaagcttga ttttgtaata attgattttt
   106261 ctttcgattt ctctagcttt tgtgttggga aatttgtttt gaatgatatt tgttaaattt
   106321 ggaggtaaaa aatttaaatc aaaaggaaag accttacttt ctatctcttt ccatgaacca
   106381 tcgctttcaa attctaattc tgtcccatcg ctcaaataaa cctcataagc gtgcttatct
   106441 ctttgtacta tacctatggg agcttgaaaa ttatttttta aaaattcttt agaaatactt
   106501 ggaagctcat cgggagatat tataatatca gcgtttaaaa aagtggataa gatggctata
   106561 atgccgtaaa attttatttt caaaagtttt tcctatttat tattttgcac taaattttag
   106621 tgaatttatg tgaattttat gtgaatttca agacaataac ataaatattt taaaggttgt
   106681 ttttggttgt aattttactg attctcttaa atatcttatt ctattttaca attccttatg
   106741 ggtattataa tttgcttggg ttaaatattt tgtttttcaa aggagcttat tggcaaattt
   106801 taagttcaat gtttatgcat ggaaatttaa ctcatctcat ccttaatatg atagttttat
   106861 ttcaatttgg tcgtatttta gagtcttatt taggtgcttt gcgtttcttt ttattgtata
   106921 taattggcgg attgatgtgt tcgcttttga gtgcttttta tgtatatttt tctttttatt
   106981 attttggtgg gatgataaat cttgtaggag caagtggagc aatttgtgtt ttgatggggt
   107041 attatgcttt tcttgataaa agtagtacaa agggtcttat agtcgctatt ttactaatga
   107101 gttttgctcc attgcttatg ggtgtaaatg tcgcatggta tgggcatatt tttggtttta
   107161 tttgtggata ttttttaggg aagttaagga gaaaaatttg aaaaaaatat atatattaag
   107221 acatgcaaag gctgttaagg atgaggaagt gcaagatttt gataggaagt taaataaaag
   107281 aggtaaagaa gacttagaaa agctttttta taatttaaaa acctatgaga taaaatttga
   107341 ttttatactt tcaagtccat ctaaacgcac tgctaagaca gctaaaaaaa tagccgaatt
   107401 ttataatttt gacaaggaaa aaattcaatt tatagatgag ctttatcttg ctaatttgtc
   107461 taaaatatat caaattttac aaactatcga taaaaaatat aatgaagttt tattagtagg
   107521 gcataatcct actttaatgg aacttggaga atttttaggc tctttatgtt tgacttcttt
   107581 tcctacttca tctatgcttt gcttagaatt tgacatagaa gactttaagg atttaaaagc
   107641 gcatagcgga aaagtgatat tttttgaaca tgtgagaaaa ttaaaagagg aaaaggagtt
   107701 ggattaatta cttccaaccc tcgatatagt ttttgagttt tctacccact tttggatgtt
   107761 tgagtttttt aattgcagag ctttctattt gtcttactct ttcgcgtgta acatttaatt
   107821 ctttacctat ttcttctaaa gttctatcgc tttcatcgtc cattagacca aaacgcatac
   107881 gaataactgc tttttctcta tcgtttagtt gatcaagaac ttcatcaatt tgctctttta
   107941 aatcatcttt taaaatgtga tccataggcg agagtgaatt tctatcttct acaaaatccc
   108001 caaatttgcc atcatcttca ctaccaatag gcgcctcaag tgaaataggc tcttttgtga
   108061 ttttaatcac ttgcttaacc ttatccacac taagtcctac ttctttggct ataacactta
   108121 catcaggctc ttttccgtct ttttgcaaat gctcgcgtat aattttattg atttgattga
   108181 tggtttctat catatgaata ggtattctta tagttctagc ttggtctgcg atcgctcttg
   108241 aaatagcttg tcttatccac caagttgcat aggttgaaaa tttatatcct cttttgtact
   108301 caaatttatc cactgctttc ataagaccta tattgccttc ttggataaga tctaaaaaag
   108361 gtaaaccacg gtttgtataa cgcttagcaa tacttacaac aagacgcaaa tttgatttag
   108421 ccattctagt tttagcttca tcagaaattt ttttacctcg tttgatttgc tctaaaattt
   108481 ctttcaagcg ctctttttct aagtcaaagc ttttctcgct cgcttcttta gtttgaaaaa
   108541 gtttttttat ctccatgtaa gtgcttacca tagtcgtttc aagcgctctt tcggtaattt
   108601 cttccttgct taattttgta atatctttta agatattagc atgacgattt tttaattctt
   108661 cagaaaacat tggcaaacgg tattctaggc gttttaattc tttatcgaat tcttcatcgc
   108721 tttttaaggc agtttccatt gattttacaa tttcactgat gagtttagaa gttggaccta
   108781 gatccatcag cttttctttt agaatatttt tcttaaaagc aattccaagt ttgtctaaaa
   108841 tttcatctcc actttcttta tctttagaaa cttttagcca atcttttttt gccttctcta
   108901 aagctttaaa tttttctatg acttttaaag ttctttcatc ttcttttttg cttgtttttt
   108961 taggagtttc ttcttcattt tctaattctt catcgttttc ttcatcctcg tcctctagtt
   109021 catcaagctt atcatcattt ttttcttcat catcaaagct tttgaaaagt tcttttactc
   109081 ttctttctct attgatcagt ggttcacgat aatctaaaat aaagtcaatc aaataaggca
   109141 cggaacaaaa agcatctatg ataatatctt caccaagttc aatttttttg gaaatttcga
   109201 tttcttcatc tttatttaaa agtgcaattt gccccatttc tcttagatac atacgcacag
   109261 gagaatccga tctgctccat tctagcaaat cattttcatt ggctaaatca aattcattct
   109321 caagactagt atcttgcaat ttttgttttt cttcttgcaa tctttttgca tcttctatat
   109381 ttttcatttg tgcaatttca gcagccgaaa ataactgtac tttatacttt ttcattaaag
   109441 tttggacttt tttggcagtg gctgaattag gttgcttgct gaagtatttt actaattttt
   109501 cgtaagtgat ataatctttt tcgttttctt taaagagctc ttcaagttcc atatcttggg
   109561 ttttggcatt cattgaactt ccttaacttt tatataagcc ttggatttta tctaaatttt
   109621 gcttaatatt tgtataaaat ttagttctta ttgtttaaat attttttcaa atttttccaa
   109681 agccctgtta aaattataat tttttctttt taagatataa aaattacgcc aaagattaat
   109741 attttttaat tttacctcat ataaaattga attttttaat tctttttcta tacttttttt
   109801 agaaaaaata gaaatagcat ttttttggat aacgagttct ttaatagcag acattctatc
   109861 gagctctaaa aagaatttaa gttttttgga aacatcgcct atttcgttta gaaatttatc
   109921 tctaagccct gagcctgttt cacgcaaaat ccatttttgt ttaagtaatt catcgatata
   109981 aaattctttt tggcttaaat ttttattact actagcaact acaagttcat ctttttgcca
   110041 aaattccatt tttaaccctt cgtgatcgat taaagtagga ttaagttctg cttcaacaat
   110101 ggcaaattct atatctccat tttttaataa atttaaacat tcttttgaat tttgagtttg
   110161 aaaatgtatt ttaacattgc taaatttaga tttaaaatca aataaaatag gagcaagaaa
   110221 gtgttcagct atgctttgag tagcagcgat cttgatttct cctaagaggg tattttcatc
   110281 attaagttct tctaagcttt tgtaataatc ttgcacaagt tttagccaaa ttttacccaa
   110341 atataaagct tttggagtag gtaaaagctt ttttcctagt ctttcaaaca atgctccgcc
   110401 taagtcctgc tctaaatttt taataatgat ggaaacatta ggttgtgtga tggaaaaatt
   110461 attggcggta tttgtaggac tttgagtatt taaaagatct aaaaaaattt ccatatcttt
   110521 g
//
LOCUS       DBBXOW010000002        58369 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.002, whole genome shotgun sequence.
ACCESSION   DBBXOW010000002 DBBXOW010000000
VERSION     DBBXOW010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 58369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 58369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..58369
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.002"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            11..1246
                     /locus_tag="ACJE1S_000109"
     CDS             11..1246
                     /locus_tag="ACJE1S_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HGG0805691.1"
                     /translation="MNAINSSFIVLCTLLVLLMTPALAMFYSGMVRSKNTLNTIMNCF
                     IVFGVITLQWVVLGFSLSFGKDEGLGLVGNFENFLLEGISGYNASGVPNILFVIFQMM
                     FALIASAIITGSLVGRIKLGVLVIFLLFWSTLVYDVLAHMIWSSEGFLLKRGSLDFAG
                     GGVVHISSGVAGLVGALMVGARKSDDEDKNAHSIPYAFLGAILLFIGWLGFNAGSAGE
                     MNDIAINAFIVSIISAACGFLSWVVLEWLIHKKPTILGGLSGLVAGLVGITPACGYVD
                     IYASLVIGTLSSVFCYFGLSFIKYKLKWDDSLDAFSLHGIGGIWGGIATGLFASAKVN
                     PNVIAQNALGEGFFISESLELLKEQIFAIVICVVLSALISFIIFKIISFFTDLRVKEE
                     VEQEGLDVSLHGEKAYTLA"
     gene            complement(1319..2230)
                     /gene="hemH"
                     /locus_tag="ACJE1S_000110"
     CDS             complement(1319..2230)
                     /gene="hemH"
                     /locus_tag="ACJE1S_000110"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HGG0805692.1"
                     /translation="MKLVLFLNMGGATNLQDCETFLKNMFNDPYILGIKNKFIRRFVA
                     WIITKSRVKAMRENYKQMGGKSPLNELTQSLCEKLNAKTKDFKFDFVNLYVPPFANEV
                     LQKYTLSENDEIILFPLYPHHSSTTVTSSLEVLQNEILKQKIKAKIKIVDIFYEDELY
                     NETIVSHILTKKSEFDAKTLIFSAHSLPQSIIDKGDLYEKHVNHHVELLKERLKDHFD
                     EIILAYQSKLGPVKWLEPNTSDILANLDNKALIYPISFCIDCSETIFELGIEYKHLAK
                     CDYDLITCPNDSDEFAQFVLKYLSDFN"
     gene            complement(2350..3204)
                     /locus_tag="ACJE1S_000111"
     CDS             complement(2350..3204)
                     /locus_tag="ACJE1S_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HGG0805693.1"
                     /translation="MKVGIVGLGKMGQNHLNELSKNKNFKINALFDMVENKNLNAPFF
                     TNLDEFLNQDNDIIIIATPTNSHLEIARKVFCKCKCVLIEKPLALNLNEIDEISNLAK
                     SYGVKVGVGFCERFNPAVLALKKELQNEEIISINIQRFSTYPQRISDVGILQDLAVHD
                     LDLLHFLSAEKIINANILKSFNKDKQREDESIITCKLEKTIACVHQSWNSTQRLRKIT
                     LVSKNHFYEANLADFSLSKDGQNLELMTQTPLFGEHMALYDLLLNKENYLANIQNAYA
                     VQEILEKF"
     gene            complement(3201..4313)
                     /locus_tag="ACJE1S_000112"
     CDS             complement(3201..4313)
                     /locus_tag="ACJE1S_000112"
                     /inference="COORDINATES: protein motif:HMM:NF005085.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HGG0805694.1"
                     /translation="MKLDQVGSFLRPKILKEARENFALGKIDEEQLRSIEDSCIRDLL
                     EECDKAGIYYLSDGELRRSWWHLDFYWGFGGIKKIKKEKGYIFKGIETRAEGIEIESK
                     IECNNHPFLKDFERLMQIAKGLKIDTNRLKLTIPSPSMLLYMLFIRGGKNTEFNYYGK
                     DFTKLKNDILNAYENFYKEFAALGGVYLQLDDTSFGSLCDYEFCALNEINADDICEEY
                     VDFLNESLKTMPKNIMSAIHICRGNYRSRYVASGGYMKVAKKLFGELRVDKFFLEFDD
                     ERAGNFEPLKYINDQIAVLGILTSKTNESPSVEELKARVKIAAQFLNPKQIEISTQCG
                     FSSTEEGNEIFTHSQWEKIKLLKQVLSELENEGFFS"
     gene            complement(4310..5389)
                     /locus_tag="ACJE1S_000113"
     CDS             complement(4310..5389)
                     /locus_tag="ACJE1S_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HGG0805695.1"
                     /translation="MNFINLQAQYLKYKEEIDSEIASVLSSSSFIGGAKLNEFETNLA
                     QYTHVQHAIGCSSGTSALYLALRALDIKQEDEVIVPSFTFIATAEMVALLGAKPVFVD
                     INLDNFNIDFELLKNAISPKTKAIIAVSMFGQMSNLQELNTFCESKNISLIEDGAQSF
                     GASFKSEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCNDESIAKKLRILLNHGQTDRY
                     KHEFIGINARLDTLQAAILNVKLKHLDEEINKRQEIAKFYNENLTNCQIPKIDENAIS
                     AYAQYSVLVEDRARVLKAFEKANIPYAIHYPTPLHKQPCFSEFSHLKLEKSEFASKHI
                     LSLPFSAFLSQSEQESVIKVFKEGL"
     gene            5506..8034
                     /gene="alaS"
                     /locus_tag="ACJE1S_000114"
     CDS             5506..8034
                     /gene="alaS"
                     /locus_tag="ACJE1S_000114"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HGG0805696.1"
                     /translation="MDVRSEYLNFFKSKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FIGEVPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHESDDEAFELWQKHIQKERIYRFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGEEYFNGEEDYMGGDGDRFLEIWNLVFMQYERSADGKLTPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIIDEIAKLCGKTYIYESGASFRVIADHIRS
                     SVFLLAQGTSFDKEGRGYVLRRILRRALRHGYLLGLKKPFMYNLVDVVCKLMGEHYTY
                     LNEKKDFIKEQICLEEERFLSTIENGIEIFNEELKNTKEVFSGEVAFKLYDTYGFPLD
                     LTQDMLREKNLVVDEAKFEELMNEQKNRAKASWKGSGDKVASGDFKNLLEKFGENCFV
                     GYEKTECQATVLALLDEDFKEVSSLKGLGWVMLDNTPFYATSGGQIADTGYIGTSEVL
                     DTQKFFNLNLSLVKANEEIKLNDKIIAKIDTDKREQTARHHSATHLLHHALREILGSH
                     ISQAGSLVESNKLRFDFTHHKALSKEELESIEKRVNEMIISSSEAILENMPLEDAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSRAALEFCKTFMNENLNLKEELKSNDLSLGVKKLKNEILKLKNELKNSNKSQLNSSN
                     INGVQICVECVESGDIKTMIDEFKNKFEKAAILLIQTKDDKITLAAGVKNCPLKAGNL
                     VKNIAQILGGNGGGRDDFATAGGKDISKIDEALKQALDLIQKGL"
     gene            8038..8589
                     /gene="maf"
                     /locus_tag="ACJE1S_000115"
     CDS             8038..8589
                     /gene="maf"
                     /locus_tag="ACJE1S_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HGG0805697.1"
                     /translation="MLILASSSVSRSNLLKEAKIEFQQISFDYDENLDKNLKPSIYVQ
                     KIVLEKERQFCTTYEEKFKDETLLFADSIVCIGDKILTKANTKEEACEMLDLQDGKCA
                     SILSAFLLKNLKKRVFSLSKTTLYFSKFDPRDLKDYVENGFYKGKAGAIMCEGFHKNY
                     IIKQEGNLNTALGLDTQNLKAYL"
     gene            8586..10517
                     /locus_tag="ACJE1S_000116"
     CDS             8586..10517
                     /locus_tag="ACJE1S_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HGG0805698.1"
                     /translation="MKILKYIFSFFVVCLIAVFIYVAYLFANADTQGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYASYEELPPRLIEALVAIEDTSFFEHDGVNIDAIFRAI
                     VKIIRSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILSKEQILER
                     YLNYIFFGHGYYGVKTAAQGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIA
                     RANNVVARMYTLGWISKAEYDEAMKEIPQVYDDTLTQNAAPYVVDEVIKQLSPSIKDL
                     KTGGYKITLNIDLDVQEMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSTRQPGSSFKPFVYQAAINLGYSPMSEIADISRIFEGGAGD
                     NKDWKPKNDGGKFLGLITLKEALTRSRNLATINLALGMGLDVLHSKLVEFGFRDIPAN
                     LSIVLGSFGISPLEYSKFYTMFGNYGVIKEPQIIKQVQDRNDQIIMEFNSNEYRVSDE
                     AQSFLVLDMMRNVVEHGTGRNARVEGIEIAGKTGTTNKNIDAWFCGLTPEIEALIWYG
                     NDNNKPMRYTEGGARTSAPVFKEFLNKYLEKFPDTTRKFSIPNGVYRGSYKGQNAYYT
                     IKSPLPRANMKFNESEILF"
     gene            complement(10560..13133)
                     /locus_tag="ACJE1S_000117"
     CDS             complement(10560..13133)
                     /locus_tag="ACJE1S_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0805699.1"
                     /translation="MANIQEFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALIVDS
                     SSILNQICNKFNISKEALELEIKSRISNLATSSNVNRENVRFSNEFINSLESAKGLMS
                     ANGDNYLSVDTWLISESEKNPIREILAKFIDIKEFQKELQNLRAGRKIESKTSDETLD
                     SLNKFGIDLTAKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKARKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQSALNSQFENEKAVFDSISAKKKEIDSLKNEAVFAKNKGEFQKAAELEYGKIPE
                     CEKEVANLEEKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYVGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQKSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADKLNENDEIVIDAKNDEIVIEK
                     A"
     gene            complement(13268..13549)
                     /locus_tag="ACJE1S_000118"
     CDS             complement(13268..13549)
                     /locus_tag="ACJE1S_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HGG0805700.1"
                     /translation="MKHTHTHSPKHIKAISNRLSRTIGHLEAIKKMVERDEDCSDILI
                     QLAAVKAAVNNTAKAILKEHLAHCMYHAVMEKDTQSIEDLNKAIDMFVK"
     gene            13692..15029
                     /locus_tag="ACJE1S_000119"
     CDS             13692..15029
                     /locus_tag="ACJE1S_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HGG0805701.1"
                     /translation="MLEFILSSKRFLAAITGFTGSLALCVFLASNLQAKPKNPSDLMQ
                     QRLESLDKLTKTLAIVEQYYVDDENITDLIDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTSGEFGGLGITVGMKDGALTVISPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTRDIIKVESVYAKLIEDENILYLRVTNFD
                     KNVVDMTSKELKKHPNVKGVILDLRNNPGGLLNQATGLVNLFVDKGVIVSQKGRVTSE
                     NQEYTANPKNKISDSSLVVLVNGGSASASEIVSGALQDLKRAIIIGENTFGKGSVQQI
                     IPINETEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFNIKESDLKQHL
                     ESELEKLDKNEKKEDKKEQKNDKNIITQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            15032..15742
                     /gene="purC"
                     /locus_tag="ACJE1S_000120"
     CDS             15032..15742
                     /gene="purC"
                     /locus_tag="ACJE1S_000120"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HGG0805702.1"
                     /translation="MKKKELLYEGKGKKLYTTEDENFLISEFKDDLTAFNAEKKGSES
                     GKGALNCKISTELFHLLEKNGIKTHLVETISDNEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKNDELGDPFINDEHCLILNLVQNEAQIKEIKEMAKKIN
                     AILTPFFDAKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            15751..15996
                     /gene="purS"
                     /locus_tag="ACJE1S_000121"
     CDS             15751..15996
                     /gene="purS"
                     /locus_tag="ACJE1S_000121"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HGG0805703.1"
                     /translation="MKILVNVFLKNGVLDPQGKAIEKALHSLNFNEIKEARVAKQIVL
                     DLDESDEQKAKERVKSMCEELLVNSVIEDYELIVSEK"
     gene            15996..16640
                     /gene="purQ"
                     /locus_tag="ACJE1S_000122"
     CDS             15996..16640
                     /gene="purQ"
                     /locus_tag="ACJE1S_000122"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HGG0805704.1"
                     /translation="MKVAIIRFPGTNCEFDTQYAFEKLGVKAQIIWHEEKEIDADLVV
                     LPGGFSYGDYLRCAAIAKIAPAMQGVIAHAKRGGYILGICNGFQILLESGLLEGAMKH
                     NNNLSFISKNQNLRVVSNDNVFLKNFQKDEIINLPVAHGEGNYYADEATLKKMQDKDL
                     ILLKYEPNPNGSVLDIAGICDENKKIFGLMPHPERACDKILGNDIGLRMLEGFM"
     gene            16637..17836
                     /locus_tag="ACJE1S_000123"
     CDS             16637..17836
                     /locus_tag="ACJE1S_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805705.1"
                     /translation="MRIIFFLVFVCLSLFARSEISVFDGQDENMQRELQKLPKEEQQI
                     YQNIAPSDENSDFDSNIYDPFIPQSSLVLTTDDYVNKVYVGEVFPIVLHAKITEDTNF
                     DFNITLQKSKDLIFLNPDLKWEYIKGDYRTVLWFEAKTSNANLEQISVSLLRNGKIFQ
                     SASISIGAIHFENTPNNKNFSHLVASSLEVKKIKTSYFDDSSIITMIELSATNANLKS
                     FFVNGVEKQGIENLKGDFNSSNAFYYAIFPSTKTDFEFSYFNKDTKKMENMSFKLKIS
                     DDEVSTQSDLNPTNRDFNIYKQYALWALTLILALWFVWKKNYFILAGALLCFILGFLV
                     DTNTENAILKAGSRAKILPTESSTYFYTANSNEKVEVLGKRLHYVKVLFRDDKIGWVE
                     SSDLQKN"
     gene            17817..18509
                     /locus_tag="ACJE1S_000124"
     CDS             17817..18509
                     /locus_tag="ACJE1S_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG0805706.1"
                     /translation="MIYKKIKALYFWFFFIISVAFVVLCFCFIKSQDTLWKLRKSWAR
                     FQKNILFCKYEVIGEFDLKANMILMNHQSTLDIIALEDLYPKNLCWIAKKELGEIPLF
                     KIAIKKPKLLCIDRKNPRDLVRVLKEAKQRLSEDRVLAIFPEGTRSRNEKLLKFQSGA
                     KILSEKLDLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTSDKKWLENTRKKM
                     QELLDQERAKLC"
     gene            18503..18871
                     /gene="crcB"
                     /locus_tag="ACJE1S_000125"
     CDS             18503..18871
                     /gene="crcB"
                     /locus_tag="ACJE1S_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HGG0805707.1"
                     /translation="MLNTILVVGLGGFIGAVLRMLSINLINKILPHSISFGTLFVNVL
                     GSFMMGLLFSYAHHKGLSPALKSFISTGFLGAFTTFSTFSYENLLLLQSGNYFNFSLN
                     ILLNIILCLIAVWLGFIIFK"
     gene            18944..20773
                     /gene="htpG"
                     /locus_tag="ACJE1S_000126"
     CDS             18944..20773
                     /gene="htpG"
                     /locus_tag="ACJE1S_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HGG0805708.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELVSNSSDALDKLNFLS
                     VSDDKYKSLKFEPRIDIKIDKDKKTLTISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWISDANGYEIEDATK
                     EEQGTSITLYLKDDEFANSYKIESIIEKYSNHIQFPIFMEKEEFIPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKTEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLYRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILSELEKLKNKDKEKYLSFFKNFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGESLRSLEEYKNDIQGEQKEIFYITGNNESLLRNSPLLEEYKQKNIEV
                     LLMDDEIDSLIAPMLGEYEGLKFIAINQVEDKNELSDEEKNEFAPLVAKFKELLKDQV
                     EDVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKN
                     NETFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIITKAFS"
     gene            20770..21090
                     /locus_tag="ACJE1S_000127"
     CDS             20770..21090
                     /locus_tag="ACJE1S_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG0805709.1"
                     /translation="MITNLPASVWMKQDLSEYQIFDVRTPAEWEEGVLPHAECVALYD
                     NHGLLNANFLEEFQARRNENKKLAFICRGGHRSMMAANFIKNELGLESVNLDGGMLAL
                     KGLI"
     gene            21087..21521
                     /locus_tag="ACJE1S_000128"
     CDS             21087..21521
                     /locus_tag="ACJE1S_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805710.1"
                     /translation="MIGLYLLIAALSFLLLYFALKKLTLNIDEKALLEPIKSDIYPKF
                     CDIIDERIREFKDGVQNNSFTLKDQDKKDELLEKLGDLNRELTFIQTMNLSNKSDSVW
                     QSELFDFLKELEKLLLEYLENGEEEAENLRENLMNEFEKLRG"
     gene            21496..23304
                     /locus_tag="ACJE1S_000129"
     CDS             21496..23304
                     /locus_tag="ACJE1S_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HGG0805711.1"
                     /translation="MNLKSLEAKVQERKNFLKYLKMTFWGIFTLVLIFALIRFSELAN
                     LLAGVAILLIGMTNLSLGFKSFSGGLLEKILTHSTNTKLKSILFGAISTLIMQSSTLV
                     SIISLSFLSAGLISLVAGVGIIFGANLGNTASSWLIVWLTRVNISILAIPLLVIGVLF
                     FFQKDNMIKSFGNIFIGIGFFFLGVDYIKNGFNEFQDAIDLSYFDFTGFKGVLIFVGL
                     GALLTGIIQSSTATIAIIVAALLTGQISFENSLAATLGTSVGGVVTAVLASLSTNVEG
                     KKLAFANCIFNFTIAIIIILIFPYFIDFLNGMAKILNIENLALKMALFHTLFNLLGIF
                     IFVLFIPQLVNFLNKIVKAPKDKNKDRPLYLEPSLLKFSDTAIEALQKESEHLYDNAY
                     AIIAHAIGLSRKDIQSNKSFEEILQNKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKA
                     QIHIDDELKNHRIFTFKIAAKNLTEATKNLKLVQENIKKYSNCGNKDLALEYNKIRSN
                     LGELLRSIQELRSVDDEKVYLIIKNLQKGKEILKEIDGLTLNNVEHLILVRKITTAEG
                     ISIINDTSFIAKIAKDLIDAVEIIFAREKVLWDDIN"
     gene            complement(23297..25102)
                     /locus_tag="ACJE1S_000130"
     CDS             complement(23297..25102)
                     /locus_tag="ACJE1S_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HGG0805712.1"
                     /translation="MQEHKKNRVSKVAFAYCMALFFMIIFLSSTFFLTSKRHIPNTEK
                     DQYSLALRGNIITKDNFTITSSRQIYRAEIDLRSINKDKFDLFLKLFQIYSGISDDEI
                     ADIKKRIQKQKKRSYHFILSQNLDSKQASYLRDLAKKLYIQGFFKAFTNNLGKVETRG
                     LSIIEHEEDRIYMSKDALTPAIGYTKMVLDPQSGILKNVGVKGLEKYYDDCLSPLQNE
                     KIQGLKDIGGNIILNLNSLQQKKIDGCLLYLNISLKLQKSIEKAIDGRNEDLKANEII
                     VGVMDSKTGQILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKLKTDEVINTYGGAYKLGRFTIRDDHKMDQMTMEEVIRYSSNIGMIQIAKRLSNLEI
                     IAGLKIFKFGEKSGIDLPYEQKGEIPNSKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNNGVYITPHLAEKFYQDGRFVSLEEDIKKEVILTPQAAQTMQKILIDVIEKGTGKK
                     AITQGIIVGGKTGTARIAERQGYTSNRYNASFFGFANDTKHNYTIGVLVRNPTKPYSY
                     YAAQSALPMFKDVVDILINEDFLTPIITENNQTLN"
     gene            complement(25108..25407)
                     /gene="fliE"
                     /locus_tag="ACJE1S_000131"
     CDS             complement(25108..25407)
                     /gene="fliE"
                     /locus_tag="ACJE1S_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HGG0805713.1"
                     /translation="MNNINDLRLNNNISNANKSQNSNDKIGDEFAKMLKNEIEDLDKT
                     QKTAEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            complement(25414..25908)
                     /gene="flgC"
                     /locus_tag="ACJE1S_000132"
     CDS             complement(25414..25908)
                     /gene="flgC"
                     /locus_tag="ACJE1S_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030694 - bacterial-type flagellum basal
                     body, rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HGG0805714.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAQGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            complement(25918..26349)
                     /gene="flgB"
                     /locus_tag="ACJE1S_000133"
     CDS             complement(25918..26349)
                     /gene="flgB"
                     /locus_tag="ACJE1S_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030694 - bacterial-type flagellum basal
                     body, rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HGG0805715.1"
                     /translation="MINPFKSKELITSALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            complement(26425..27426)
                     /gene="mltG"
                     /locus_tag="ACJE1S_000134"
     CDS             complement(26425..27426)
                     /gene="mltG"
                     /locus_tag="ACJE1S_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HGG0805716.1"
                     /translation="MRIPFLRTKNTTEINTIKTSNAYTIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFLPQGSIAQIITHLKQNKYEMSTIDKYILFFLGHPQSGWINIGTKELN
                     RIEFLHKLTIAKAALETLTLIPGETSVIFLEQAAKQLELDKNTLLAEFEKQATYKEGV
                     FLPETYKIPKGITEALLVQVLLKHAENSNRKTSEKIFGEYNAKKWHQYIITASVIQKE
                     AANESEMPIVASVIYNRIKKGMKLQMDGTLNYGFYSHTKITPQRIREDNSSYNTYKFE
                     GLPKEAVCNVSLSAIRAAIFPAKTDYLYFVRDKTTGAHIFSTNLNDHNKAIQSQKNK"
     gene            27341..29911
                     /locus_tag="ACJE1S_000135"
     CDS             27341..29911
                     /locus_tag="ACJE1S_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HGG0805717.1"
                     /translation="MKKKIVYALLVLIVFISVVFLVLKNGILISHIQFSFLNLEQLYI
                     KLDKKLIVRAKNITFNEDNNASIQDDKNVNSDFASKELLNITKNLKYLYTFVEEIDIQ
                     NFNIKDNHMRILFKNDEFFVDNDLLFLKLALHREGKEINADIKNLLLKDYNLSIDGNL
                     SINAKSEFYNFKGQANSDLADFKINISYKNQNLAYKFEDINIRDITTIFNQAKKRIAL
                     PEPLVLWVAHRAKGDFYHFDFIQGFIDFSKNNYYFDDISAWGYANNVKVRLDNQMNAI
                     NFPKLDLNLSNQKLNFTFNKASYNESDLSESKVFLYDLFDNKKHGIYLRIKSKNLKFD
                     EKLAKALKNYDLNLPFYQKNGKLGSDLELIIDFNEKGDVKYNGTLSLENAELSLANFS
                     VARAFVKLNQNALSIENASVKNEFLEADFNAKIDLATHKGIFDTQISRLYFDNGELFD
                     MRNQKTKINLDYTDDLQLSVPEWDLTLNFKEGLEAYANNPNILIPHSPLLKKFGFMGA
                     KSIYYKSVDFNDFNAQIQDAHFKNNLLVNNKPYENDSFGIVRKSGVLNINTQSGLANV
                     KVIDNNKTIHLKNLTYIYQKDENASTSSFDIAKNTQNIILNGENLTLILADFNKTLNF
                     DKMEANLKSDILDARATRKNANFDLHYSPNDLKLFIKNINDEHLNEFLQKRAVQEGVF
                     NFSVIGSGLDYFEGEFNFKDTFIRDLKGVNQLISFIDTVPSLLMFKTPTFNEKGLSLH
                     DGRVVFNRKKDLLSFEAINLNGNSMDLYGLGSANLRLNTIDIDLELKTLKSASETISK
                     VPILNYVILGKNQEISANIKVDGALDDPKFHTQILSDTLKTPFNLIKNIIQLPSNLFN
                     "
     gene            30028..32232
                     /locus_tag="ACJE1S_000136"
     CDS             30028..32232
                     /locus_tag="ACJE1S_000136"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HGG0805718.1"
                     /translation="MQVTYTLTDESPALATYSFLPIVKAFLSKAHIGVKTSDISLSGR
                     ILATFSEYLKEDQRCEDALELLGELVKKSDANLIKTPNISASIPQLKAAIKELQEKGY
                     MLPNYPDEPKNDEEFQIKAKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDEDCVASIEFVADSGKSEILKEGLKLEKNEI
                     LDATFMDVEKLQDFYAKEIKASKDNDLLFSLHLKATMMKVSDPILFGYAVKIFFKELF
                     DEFKDEFETLGINPNNGLSELLSKVQTSSKKDEILRRYNEILNSRADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPAKLGSVSNVGLMAKKAQEYGSHDKTFVAKEDGVFKIIAKGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERADLTGAEAIFWLDSKRASNKIMIDLVQNRLKEKNKNIA
                     ILAPYEACLKSLELIRAGKDAISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCNNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQANDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAIIEKIGQR"
     gene            32229..33137
                     /locus_tag="ACJE1S_000137"
     CDS             32229..33137
                     /locus_tag="ACJE1S_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HGG0805719.1"
                     /translation="MKITIIGAGNVGSSVAYALILRELANEIVLVDINEDLLIARELE
                     LSQSIAALNLDIELTCTKDYAYTKNSDIVLFSAGFARKDGQSREELLQLNTNIMLDCA
                     KKIKEFNPDPLFIILTNPVDFLLNTLYESGIFSSKKIVAMAGVLDNARFKYEVAKKLK
                     ARISSVDTRLIGFHNDDMVLVKSYASVKNQKLGELLSEEEFEDLENEVKTGGAKVIKH
                     LKTSAYLAPASACVRMLESIRSGEFLPMSVILHGEFGVQNKALGTMARLGLEGVVEIM
                     KLELSDEEKDKVKKSLIKYQYIKEDK"
     gene            33134..34297
                     /gene="sucC"
                     /locus_tag="ACJE1S_000138"
     CDS             33134..34297
                     /gene="sucC"
                     /locus_tag="ACJE1S_000138"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HGG0805720.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVEEAVENAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKAYASQILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDESKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASAETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKAILDSSNLKNIKAATNLKNGAELVKSLVG"
     gene            34307..35176
                     /gene="sucD"
                     /locus_tag="ACJE1S_000139"
     CDS             34307..35176
                     /gene="sucD"
                     /locus_tag="ACJE1S_000139"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HGG0805721.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATGADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFEKDNETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            35191..35502
                     /locus_tag="ACJE1S_000140"
     CDS             35191..35502
                     /locus_tag="ACJE1S_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HGG0805722.1"
                     /translation="MSIAAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTPEAKDRAVAVKNNKYKKL
                     A"
     gene            35511..36635
                     /locus_tag="ACJE1S_000141"
     CDS             35511..36635
                     /locus_tag="ACJE1S_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HGG0805723.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGVSVTIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASVAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIEIINRKKFTGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGAIVKKNMERLIGKIKNNQDDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAINRLREEGIKVGLFRPITLYPVAEKKIAEVASKFKKVMVSELNM
                     GQYLEEIERVSSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            36637..37482
                     /locus_tag="ACJE1S_000142"
     CDS             36637..37482
                     /locus_tag="ACJE1S_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HGG0805724.1"
                     /translation="MAFNYDEYLRTDKLPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKSKFESMDFEERKDKFPTGVLYEDSTQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            37479..38036
                     /locus_tag="ACJE1S_000143"
     CDS             37479..38036
                     /locus_tag="ACJE1S_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HGG0805725.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDILKETMLHMVP
                     AKTRDANSKAFDLGVKYAQETKAHS"
     gene            38165..38428
                     /locus_tag="ACJE1S_000144"
     CDS             38165..38428
                     /locus_tag="ACJE1S_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HGG0805726.1"
                     /translation="MDIFDEMFNKTPKEKFIEIIQNGNLGALEKVFENFFADHIAMIE
                     LLEKQGFNEMDMKSFILENGDFIQERQNDLFIELGAKILGHEG"
     gene            38428..38958
                     /locus_tag="ACJE1S_000145"
     CDS             38428..38958
                     /locus_tag="ACJE1S_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HGG0805727.1"
                     /translation="MSIRLLVFFTLMANCIVLNAAPVFDYTYKFTLKKDERASVEIKE
                     LGYDNGVQNFDFYWTLFDNTNIVVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYKNPH
                     IDRARLILEFSEYKKGEAIFTVYIEDKDSRLEVKFLDPRKMQLTNPPQNNQVVPMIDF
                     NEPQVEPLIQRENTTN"
     gene            38975..39868
                     /locus_tag="ACJE1S_000146"
     CDS             38975..39868
                     /locus_tag="ACJE1S_000146"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HGG0805728.1"
                     /translation="MQPIDDLIKQYLQELDYEPILTMLANTKSGKKLRSKLLLAIAGE
                     NANSYKICAAIELIHLASLLHDDIIDESKLRRGAKSVNAEFGTKNALMLGDILYSKAF
                     YELSQLDACFASIISDAVVKLAVGELMDVELSKSFNADKDKYLKMIYNKTAVLIEASA
                     RCGAILANLDEKAFGEYGKNLGLAFQMIDDILDIKGDEKTLGKPAMNDFKEGKTTLPY
                     IYLYENLNNEDRAQLKNLFQKDLNNDEKIWIQTKFEETKALNKAILEAKEYAHQAALA
                     IKDFSNEKLQDIIQAMIDRDF"
     gene            39868..41163
                     /gene="hemA"
                     /locus_tag="ACJE1S_000147"
     CDS             39868..41163
                     /gene="hemA"
                     /locus_tag="ACJE1S_000147"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HGG0805729.1"
                     /translation="MYYCISFTHKNTDLSLRERLSFSDEAKKNEFLRLLSIHENIEEC
                     LVISTCNRVEIVAYVKEACAEYIIKSLALLCNVDKESLVQKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFALKNNFCAVHLSRAIHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELLPLDGKSAIVIGAGEMGELAAKHLITAGARVIVLNRDMEKARIL
                     CERLGVLSECDSLNNLKKYLDEYELFFSATNAPNAIITNSLIDEVSHKRYFFDIAVPR
                     DIDISENEKISVFAVDDLEVVVRKNLALREQEARMAYGIIGRETAEFFRYLNDLALTP
                     IIKAIRLQAKECANKQLQIALDKGYLKHSDEEEARKLIHQVFKAFLHTPTMNLKHLQG
                     KMQSDTVINAMRYIFDLENNLEGLNQYTCEFNMENNDEI"
     gene            41150..42859
                     /locus_tag="ACJE1S_000148"
     CDS             41150..42859
                     /locus_tag="ACJE1S_000148"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HGG0805730.1"
                     /translation="MMKFSKLYAPSLKEAPKDATLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAVRANKTCDEERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEVKAQNACNALELVDASEEELEKAGLV
                     AGFIGFVGLKNVDFYLDKELEGEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLAEVKE
                     NDCCAKCGAKLKLSKGIEVGHIFKLGQKYSKAMNANFLDENGKSKPFYMGCYGIGVSR
                     LLAVAIEANHDEKGCIWNKTLAPFTLEIIISNIKDEKSLEFATKLYEDLSNAGIEVLL
                     DDRNERFGVKMNDFELMGFPYALVVGKGLEKDELEFIDRKTLEKKIISSKEVFDFIKK
                     SVE"
     gene            42856..43242
                     /locus_tag="ACJE1S_000149"
     CDS             42856..43242
                     /locus_tag="ACJE1S_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integral memnbrane protein"
                     /protein_id="HGG0805731.1"
                     /translation="MNYKLSLSPLFLLELVASILFIVFFGLGNFLIFILASMIFGVIL
                     LGIFWKNMLEFRISGFKDMLTQFAFVMAAFLFIFPGIVTSIFGFFVLCFGLIFNFAKP
                     RYKRNYRQNNTSDEEIIDVEIIEERK"
     gene            43239..44165
                     /gene="hemC"
                     /locus_tag="ACJE1S_000150"
     CDS             43239..44165
                     /gene="hemC"
                     /locus_tag="ACJE1S_000150"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HGG0805732.1"
                     /translation="MKELVIATRKSQLALWQSEFIADFLNKTHGIAVRLEGFKTKGDV
                     LLDSPLAKIGGKGLFTKELEESMLRNEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSN
                     DAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNGD
                     FDAIILAMAGIKRLDLDKQVNFVYTFSKDELIPAASQGALGIESIDDEKFLKFLKCLN
                     DDNALIETTIEREFISTLEGGCQVPIGINAELLGDEICVRAILGLPDGSEILKEKRMI
                     KKSDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            44162..45964
                     /locus_tag="ACJE1S_000151"
     CDS             44162..45964
                     /locus_tag="ACJE1S_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HGG0805733.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KIDFFMNLLSLKNVPPKRLKADKALYDYELLNSLEELPILKTWEEDAGRFITMGQVYT
                     QNLDKTQNNLGMYRLQVSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKITPCENGIFVPYDSDVVIEGYVDLEEFKV
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYMLDRFNTKKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            46121..46486
                     /locus_tag="ACJE1S_000152"
     CDS             46121..46486
                     /locus_tag="ACJE1S_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlaG family protein"
                     /protein_id="HGG0805734.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASSNIQTDRSQSQGGDDGQ
                     QQGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            46489..48405
                     /gene="fliD"
                     /locus_tag="ACJE1S_000153"
     CDS             46489..48405
                     /gene="fliD"
                     /locus_tag="ACJE1S_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009421 - bacterial-type flagellum
                     filament cap [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HGG0805735.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSKGLANDGGFVNAQLNGTADLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDSNGKYTSDSEA
                     EKIFSNLGWELDKTTQTIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTV
                     TDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGT
                     KGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAG
                     TLSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLNSNGLEFKP
                     GDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVESYNQ
                     NNVTGFRLNFSGDGSSDFSIKGNASILKELGLSDVNITSKPIEGKGIFSKLKATLQEM
                     TGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLNQQLN
                     TVTNMINAANNSNN"
     gene            48417..48803
                     /gene="fliS"
                     /locus_tag="ACJE1S_000154"
     CDS             48417..48803
                     /gene="fliS"
                     /locus_tag="ACJE1S_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HGG0805736.1"
                     /translation="MQNNLAYNAYSQNQVGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLNYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            48784..49059
                     /locus_tag="ACJE1S_000155"
     CDS             48784..49059
                     /locus_tag="ACJE1S_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805737.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLAKESPSED
                     FLKENANDVFYQVQALLQEAVILIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(49057..49381)
                     /gene="rnpB"
                     /locus_tag="ACJE1S_000156"
     ncRNA           complement(49057..49381)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACJE1S_000156"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            49488..50057
                     /gene="efp"
                     /locus_tag="ACJE1S_000157"
     CDS             49488..50057
                     /gene="efp"
                     /locus_tag="ACJE1S_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HGG0805738.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEEKTMQYLYDDGENCQFMDTESYEQVAISDEDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIVETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            complement(50219..51303)
                     /locus_tag="ACJE1S_000158"
                     /pseudo
     CDS             complement(50219..51303)
                     /locus_tag="ACJE1S_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788234.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(51300..52532)
                     /locus_tag="ACJE1S_000159"
     CDS             complement(51300..52532)
                     /locus_tag="ACJE1S_000159"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HGG0805739.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKENIILKLACALRENFKIILEA
                     NEKDMTNFTKSGAMRDRLLLDEKRIFSLCDALEKIAYLEDPIGKISKGWVNYVGLKIE
                     KISIPIGLISVIYEARPSLSAEIIALMIKSSNACVLKGGSEAKFTNSAIFDLVYKVLE
                     EFNLQDCFAMFYERNEIMQILAFDDLVDVIIPRGSSNMIQEIASHTKIPLIKQDKGLC
                     HAFVDESANLNMALEIILNAKCQRVSVCNALETLLIHEKIAKDFIKLLIPEFEKFKVK
                     IHAHENILEHFKNSKLEISKADESTFDTEWLDYAISIKSVKDCDEAIEHINQHSSLHS
                     ETIISNNALNIGKFQRLLRSSCIYVNASTRFSDGGEFGFGGEVGISTSKLHARGPMGV
                     EDICTYKYLISGEGQIRK"
     gene            52603..53538
                     /locus_tag="ACJE1S_000160"
     CDS             52603..53538
                     /locus_tag="ACJE1S_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HGG0805740.1"
                     /translation="MKKVDLIVVGAGPTGIGCAVEAKLKNKEVLVLEKSNNICQTLMQ
                     FYKDGKRVDMAYKGCEGTNHGHVPFQDGTKESTIETFQNALNEHKIEVEFGSEVESVK
                     NENGVFLVSTGKGVYECKNIIVAIGRMGKPNKPDYKLPITLTKIINFNANSVLGDEKI
                     LVVGGGNSAAEYAVDLANSNKVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     IEELEDDNGKAKVKFNDGSNETYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILAVI"
     gene            53764..55095
                     /locus_tag="ACJE1S_000161"
     CDS             53764..55095
                     /locus_tag="ACJE1S_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HGG0805741.1"
                     /translation="MSNIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     NDALAALALIIPFIMISFALADMIAIGSAVQISMHLGLGKKHLARKIFSSSMLIIFLI
                     SCLVGILEYLLSPVLIDFLDVNEDIKSMAKECMLVFALFAPFTMCSFALDNYLRICGK
                     TTYSMTMNVIIALSNIVLDYIFIVVLGWGLFSAALATCLGLMLGGIFGIFPFLFQNLE
                     LKFSSLYMNMKIFKNIVYNGSSEFFGNISGSLYGIFANLVLLKISGTQAVAAFSIVSY
                     IDNFIIMLIIAMGDAMQPALSYNYAKKDFSRIKDILKVMFFAGAILSLLSVAMIFVLG
                     KDLVGLFTQENDQEFIIFAYMALMLFSFNYLFAWFNVLSGSFLTASNKASFSLILSLS
                     QNLFIPLCFLLILSSIMGLKGVWLSPFFAEFCVLVLACIFVRKVFKKLSFL"
     gene            complement(55118..56047)
                     /locus_tag="ACJE1S_000162"
     CDS             complement(55118..56047)
                     /locus_tag="ACJE1S_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HGG0805742.1"
                     /translation="MKKTLFSFALASLFVSQASSIEFQSGLSGNLSLGVGVRDVKSNI
                     SPLANSDYLSGYNADNSDTAAIPFIGLELYYGNLIDNDRVFLKNYNGRDLSGIALGYE
                     RAYLERFSTSFSFISSLREKAYANPYFIGNREETDVSKYGFRISQLYESDFGKFNASY
                     VFAKNKLDKESIEFASLKREGNYHELELSYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     KIGTHLVFARNYILTPSLSLNQYKADGTDPIFNQKQDGSITKFNLKLVKNQFLGYNSL
                     YGFTNYGLEKRNSDIDFYDETYHILLTGVGYKF"
     gene            56189..57562
                     /locus_tag="ACJE1S_000163"
     CDS             56189..57562
                     /locus_tag="ACJE1S_000163"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HGG0805743.1"
                     /translation="MQQDHFDLDLERAILSSCIMSEDAYSSIAGDIEPKDFSLKAHQD
                     VFKAIIACVNAGEPISISFLKKHKKIDEQILTEIIATPSIIDLPAYVNELREKSIKRQ
                     LLSFAHLLPTRINDNRAVSEISDEIGKEIFNITNRVNTNDIKDIEIVLSELLEEFKKQ
                     KSLENKSVIGLDTGFEDLNTMTKGFKGGELIIIAARPGMGKTTLCLNFIEKVLRQDKG
                     VVMFSLEMPAAQIMQRMLSAKTSIPLQKILTADLNDNEWERIGDACNYYSKKKLFIYD
                     SGYATITDVRAILRRLKAQEESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRSLEQRANKRPMMSDLRESGAIEQDADTILFVYRDEVYREQDEK
                     ERENKAKAEGKPYQRNFIPNPMQENAEILVGKNRNGPVGVVEVLFLKEKSCFVDKPRF
                     ESVEFQE"
     gene            complement(57630..57836)
                     /locus_tag="ACJE1S_000164"
     CDS             complement(57630..57836)
                     /locus_tag="ACJE1S_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805744.1"
                     /translation="MKITTKTLLNGNKLAIIFLIFLAPNLAFGVESTKGVLSIIHNGL
                     LSWTPLIKTACLWVFWTLVIIDLV"
     gene            complement(57799..58035)
                     /locus_tag="ACJE1S_000165"
     CDS             complement(57799..58035)
                     /locus_tag="ACJE1S_000165"
                     /inference="COORDINATES: protein motif:HMM:NF033894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HGG0805745.1"
                     /translation="MAFLAGCGDEAKTSDYYKAHLDETKARVAECKKMEKMNETQQRD
                     CSNAKWAVEMQTDNRVPYGIGKNENYNKDALKWK"
BASE COUNT        19906 a         8022 c        10646 g        19795 t
ORIGIN      
        1 ggataggtaa atgaatgcga taaattcaag ttttattgtg ttgtgtactt tgctagtttt
       61 gcttatgact ccagctttgg caatgtttta ttcaggtatg gtaagaagta aaaatactct
      121 taataccata atgaattgct ttattgtttt tggtgttatt actttacaat gggtagtgct
      181 tggatttagt ctttcttttg gtaaagatga aggacttggg cttgtaggaa atttcgagaa
      241 tttcctctta gagggtatta gcggatacaa cgcttcaggc gttccaaata ttctttttgt
      301 gatttttcaa atgatgtttg cacttattgc atctgctatt ataacaggct ctttggtggg
      361 aagaatcaaa ctgggtgttt tggtgatatt tctacttttt tggagtactt tagtttatga
      421 tgtgttagcg catatgattt ggagcagtga gggatttttg cttaaaagag gaagtcttga
      481 ttttgctggg ggcggtgttg tgcatatcag ctctggggtt gccggacttg taggagcttt
      541 gatggtaggc gctagaaaaa gtgatgatga ggataaaaac gcgcattcta ttccttatgc
      601 tttcttgggt gcgattttgc tttttatagg atggttaggt tttaatgctg gaagtgctgg
      661 cgaaatgaat gatattgcta tcaatgcttt tatagtaagt attatatcag cagcttgtgg
      721 ctttttatct tgggtggtac ttgagtggct catccataaa aaaccgacta ttttaggtgg
      781 acttagtggg cttgtagcag ggcttgtggg aattactcca gcttgcggtt atgtagatat
      841 ttatgcttct cttgttatag ggactttgtc ttctgtgttt tgttattttg gtttaagttt
      901 tatcaaatac aaacttaaat gggatgattc tttagatgcc ttttctttac atggaatcgg
      961 aggtatttgg ggaggaattg ccacagggct ttttgcaagt gctaaagtaa atcctaatgt
     1021 gattgcccaa aatgcacttg gcgagggatt ttttatcagc gaaagtttgg aacttttaaa
     1081 agagcaaatt tttgctattg tgatttgtgt ggttttgtca gctcttataa gctttattat
     1141 ttttaagatc atttcttttt ttacagactt aagagtaaaa gaagaagtag agcaagaagg
     1201 tttagatgtg agcttgcacg gagaaaaagc ttatactttg gcttagttgg ttaatttttt
     1261 accaaaaagt ccttgttaat ctttaaaaaa tgatagacaa ggacttcaaa attcattctc
     1321 agttaaaatc agataaatac tttaaaacaa attgagcaaa ttcatcgcta tcatttggac
     1381 aagtgattaa atcataatca cactttgcta aatgtttata ctctatacct agctcaaaaa
     1441 tcgtttcaga acaatctatg caaaaagaaa taggataaat caaagctttg ttatctaaat
     1501 ttgccaaaat atcgcttgta tttggttcaa gccattttac tggtcctagt tttgattggt
     1561 aagctaagat aatctcatca aaatgatctt ttaatctttc ttttaaaagt tctacatgat
     1621 gattgacatg tttttcatat aaatcgccct tgtcaataat gctttgcggt aaagaatgtg
     1681 ctgaaaaaat taaagtttta gcatcaaact cacttttttt ggtcaaaata tgagaaacaa
     1741 tcgtctcatt ataaagctca tcttcgtaaa aaatatctac aatctttatt tttgccttga
     1801 ttttttgttt taaaatttca ttttgcaaaa cttcaagcga tgaagtaact gtggtgcttg
     1861 agtggtgtgg ataaagtgga aaaagaatga tttcatcatt ttcacttaaa gtgtattttt
     1921 gcaaaacttc attggcaaaa ggcggcacat aaagattgac aaaatcaaat ttaaagtctt
     1981 ttgtttttgc attaagcttt tcgcacaaac tttgagtaag ttcattgagt ggagattttc
     2041 cacccatttg tttataattt tctctcatag cttttacgcg agatttcgta ataatccacg
     2101 ccacaaatct tcttataaat ttatttttaa tacccaaaat ataaggatca ttaaacatat
     2161 tttttaaaaa agtttcacaa tcttgtaaat ttgtggctcc gcccatattt aaaaataaaa
     2221 ctaatttcat ctaaaaacct ttttttaatt ttattttact tcagtatgga tttaaaatca
     2281 ataaattttt atctaagtgt tttattgaaa ctcaagttat ttggagttta ttgcattatt
     2341 ttagaaaaat taaaattttt ctaaaatttc ttgcacagca taagcatttt gtatatttgc
     2401 taggtaattt tccttattta aaagcaaatc atataaagcc atatgttcgc caaaaagggg
     2461 tgtttgtgtc atcagttcta agttttgtcc atctttactt agggaaaaat ctgctaaatt
     2521 tgcctcgtaa aaatgatttt tactcacaag tgtaattttt cttagtcttt gcgtactgtt
     2581 ccagctttga tgcacacaag cgatcgtttt ttctagcttg caggttataa tgctttcatc
     2641 ttctctttgt ttgtctttat tgaagctttt taaaatgtta gcgtttataa ttttctctgc
     2701 gcttaaaaaa tgaagtaagt caagatcatg cacagccaaa tcttgtaaaa ttcctacatc
     2761 actgattctt tgcggatagg tggaaaatct ttgtatattg atgctgataa tttcttcatt
     2821 ttgaagctct ttttttagag ccaaaactgc aggattaaat ctttcacaaa atcccacacc
     2881 cacttttaca ccatagcttt tagctaaatt tgaaatttca tctatttcat ttaaattcag
     2941 agctaaaggc ttttcgatta atacacattt acacttacaa aaaacctttc tagctatttc
     3001 taaatgtgaa tttgtcggtg ttgcaatgat gatgatgtca ttatcttgat ttaaaaattc
     3061 atccaaatta gtaaaaaaag gcgcgtttaa atttttattt tcaaccatat caaacaaagc
     3121 gttgatttta aaatttttat ttttactaag ctcgtttaaa tggttttgcc ccatttttcc
     3181 aaggcctaca attcctactt tcaagagaaa aatccttcat tttcaagttc gcttaaaact
     3241 tgttttaaga gtttgatttt ttcccattga gaatgagtga agatttcatt tccttcttca
     3301 gtggagctaa agccacattg tgtgctgatt tcaatttgtt ttggatttaa aaattgagct
     3361 gctattttta ctcttgcttt taactcttct acgcttggac tttcattggt tttgctagta
     3421 agaattccta aaaccgcaat ttgatcgttg atgtatttta aaggttcaaa atttccagcc
     3481 ctttcatcat caaattctaa gaagaattta tcgactctaa gttctccaaa aagcttctta
     3541 gcgactttca tatagccccc acttgctaca tagcgactgc ggtagtttcc acgacaaata
     3601 tgaattgcac tcattatgtt ttttggcata gtttttaaac tctcatttaa aaaatctaca
     3661 tattcttcac aaatatcatc tgcgttgatc tcatttaaag cgcaaaattc ataatcacat
     3721 aaagaaccaa agcttgtatc atcaagttgc aaatatactc caccaagagc tgcaaattct
     3781 ttgtaaaaat tttcataagc atttaaaata tcatttttaa gttttgtaaa atctttacca
     3841 tagtaattaa attctgtgtt tttgcccccg cggataaaaa gcatatataa aagcattgaa
     3901 gggcttggaa tggtaagttt taagcgattt gtatctattt ttaaaccttt tgcaatttgc
     3961 attaatcttt caaaatcttt taaaaaagga tggttattgc actcgatttt actttcaatt
     4021 tctatgccct cagcccttgt ttctatccct ttaaagatat aacccttttc ttttttgatt
     4081 tttttaatgc cgccaaaacc ccagtaaaaa tcaagatgcc accaagaacg gcgtaattcc
     4141 ccatcactta aataataaat tcccgcctta tcgcactctt ctaaaagatc tcttatgcaa
     4201 gaatcttcaa tgctgcgaag ttgttcttca tcgatttttc ccaaggcaaa attttctcta
     4261 gcttctttta aaattttagg tcttaaaaaa gatcccactt gatctaattt catagtcctt
     4321 ccttaaacac tttaattaca ctttcttgct cactttgact taaaaatgct gaaaatggca
     4381 aggataaaat atgcttactc gcaaattctg atttttctaa ttttaaatgc gaaaattcac
     4441 tgaagcaagg ttgcttgtga agtggtgtag gataatggat agcataagga atgtttgctt
     4501 tttcaaaagc ttttaaaact ctagctctat cctctactaa aacgctatat tgcgcataag
     4561 cactgatggc gttttcatca atctttggaa tttggcaatt tgtcaaattt tcgttgtaga
     4621 attttgctat ttcttgtctt ttgttaattt cttcatctag gtgttttaat tttacattta
     4681 aaatggctgc ttgaagagta tcaagacgag catttatccc tataaattca tgtttataac
     4741 gatcagtttg tccgtggttg agtaaaattc ttaatttttt agctatgctc tcatcgttgc
     4801 aaaaaatcgc tccgccatcg ccataagctc ccaaaggctt agaaggaaaa aagctagtgc
     4861 atgaaatttt ggcaatagag caagattttt cactcttaaa gcttgctcca aaactttgtg
     4921 cgccatcttc aatcaagctt atatttttac tttcgcaaaa ggtgtttaat tcttgtaagt
     4981 tgctcatttg accaaacata ctcacagcaa taattgcttt tgttttaggg ctgatagcgt
     5041 tttttaggag ttcaaaatcg atattaaaat tatctaaatt tatatctaca aatacaggct
     5101 tagctcctag tagtgctacc atttcagcag tagctataaa agtaaagcta ggcactatga
     5161 cttcatcttc ttgtttgata tctaaagccc ttaaagcaag atataaagca cttgtgccac
     5221 ttgagcatcc tatggcgtgt tgtacatgag tgtattgggc taaatttgtt tcaaattcat
     5281 ttaattttgc accccctata aaagaggagc ttgataaaac acttgcgatt tcagaatcga
     5341 tttcttcttt atatttaaga tattgagctt gaagattgat aaaattcata aaaaaccttg
     5401 aaaattaaag aaattaatta aaaaggctta ttgtatttta gttttactta atttaaagta
     5461 attttggtat gatatgcttt tataaaaatt tcttaggaaa atcttatgga tgttagaagt
     5521 gaatatttaa atttttttaa gtctaagggt catgaaatca ccccttcaag tcctttagtt
     5581 cctgatgatg caaccttgct ttttacaaat gcaggaatgg tgccttttaa aagtatattt
     5641 ataggagaag tgcctcgtcc aaatccacca cgcaaaacaa gttgccaaac ttgtataaga
     5701 gcagggggaa aacacaatga tttagataat gtaggctata ccgctcgcca tcatactttt
     5761 tttgaaatgt taggaaattt cagctttggg gattatttta aagaacaagc tatcgcttat
     5821 gcttgggaat ttgtaaccga ggtattaaaa cttcctaaag atagacttta tgtaaccgta
     5881 catgaaagcg atgatgaagc gtttgaattg tggcaaaaac atatccaaaa agaaagaatt
     5941 tatagatttg gcgataagga taatttttgg caaatgggcg atacaggtcc ttgtggtcct
     6001 tgtagtgaga ttttttatga tcaaggcgaa gagtatttta atggcgaaga agattatatg
     6061 ggtggagatg gagataggtt cttagaaatt tggaaccttg ttttcatgca gtatgaaaga
     6121 agtgctgatg gtaaacttac gcctttgcca aaaccaagta ttgatacagg aatggggctt
     6181 gaaagggtta cagctatcaa agagggtaaa tttagcaatt ttgacagctc gctttttatg
     6241 cctattatcg atgaaattgc aaaactttgt ggtaaaactt atatttatga aagtggagct
     6301 agctttagag ttatcgctga tcatataaga tcgagtgtat ttttgctcgc tcaaggaacg
     6361 agttttgata aagagggtag gggttatgtt ttacgccgta ttttacgccg tgctttaaga
     6421 catgggtatt tattggggct taaaaaacct tttatgtata atttagttga tgtagtttgc
     6481 aagcttatgg gtgagcatta tacctatctt aatgaaaaga aagattttat aaaagagcaa
     6541 atctgcttag aagaagagag atttttgagc actatagaaa acggtattga aatttttaat
     6601 gaagagctta aaaataccaa agaagttttt agcggagagg ttgcattcaa gctttatgat
     6661 acttatggtt ttccacttga tttaacgcaa gatatgttaa gagaaaaaaa tcttgtggta
     6721 gatgaagcta aatttgaaga attgatgaat gaacaaaaaa atcgtgcaaa agcttcttgg
     6781 aaaggaagcg gcgataaggt agcaagtgga gattttaaaa atttacttga aaaatttgga
     6841 gaaaattgct ttgtgggtta tgaaaaaaca gaatgtcaag ccaccgtttt agctcttttg
     6901 gatgaagatt ttaaagaagt ttcaagtctt aaaggcctag gctgggttat gcttgataat
     6961 actccttttt atgcaacaag tggggggcaa attgctgata caggatatat aggaactagc
     7021 gaagtgctag atactcaaaa gtttttcaat ctcaatctta gtcttgtaaa agctaatgaa
     7081 gaaatcaagc ttaatgataa gataatagca aaaattgata ccgacaaaag agaacaaact
     7141 gcacgccatc attcagctac tcatctttta catcacgctt taagagaaat tttgggttct
     7201 catatcagtc aagcaggttc tttggttgaa agcaataaat taagatttga ttttactcat
     7261 cacaaagctt taagcaagga agaattagaa agtattgaaa aaagagttaa tgaaatgatt
     7321 attagctcaa gcgaagcaat tttagaaaat atgcctttag aagatgctaa aaaaagtgga
     7381 gctattgctt tatttaatga aaaatatcaa ggtaatgtac gcgttttaac cttaggtgaa
     7441 agtaaagagc tttgcggagg aactcatgta aaaaatacag ctcaaatagg aagtttttac
     7501 atagttaaag aaagtggtgt aagtgcaggt gtaaggcgta tagaagcggt tgtttcaaga
     7561 gcagctttag aattttgcaa gacttttatg aatgaaaatc taaaccttaa agaagagctt
     7621 aaaagcaatg atttaagtct tggggtaaaa aaacttaaaa atgaaattct aaaattaaaa
     7681 aacgagctta aaaattctaa caaatcacaa cttaactcaa gcaatatcaa tggagttcaa
     7741 atttgcgttg aatgcgtaga aagcggtgat ataaaaacca tgattgatga atttaaaaac
     7801 aaatttgaaa aagctgctat tttactaata caaacaaaag atgataagat aacccttgca
     7861 gcaggtgtga aaaattgtcc tttaaaagct ggaaatttgg ttaaaaatat tgctcaaatt
     7921 ttaggtggca atggcggcgg aagagatgat tttgctacag caggcggtaa agatataagc
     7981 aagatagatg aagctttaaa acaggctttg gatttgatcc aaaaaggact ttaagcaatg
     8041 ttaattcttg cttcaagttc tgtttctaga tcgaatttgc tcaaagaggc aaagattgaa
     8101 tttcaacaaa taagctttga ctatgatgaa aatttagaca aaaatttaaa gcctagtatt
     8161 tatgtgcaaa aaatcgtctt agagaaagaa agacaatttt gcacgactta tgaagagaaa
     8221 tttaaagatg aaactttact ctttgcagac agcatagttt gcataggaga taaaattctt
     8281 actaaggcaa ataccaaaga agaagcttgt gaaatgcttg atttacaaga tggaaaatgt
     8341 gctagtattt taagtgcttt tttgttaaag aatttaaaaa aaagagtttt ctctctttca
     8401 aaaacaacgc tttatttttc aaaatttgat cctcgtgatt taaaagacta tgtagaaaat
     8461 ggattttata agggtaaagc aggggcgatt atgtgtgagg gttttcataa aaactatatc
     8521 attaaacaag agggaaattt aaacaccgct ttaggacttg atactcaaaa tttaaaggct
     8581 tatttatgaa aattttaaaa tatatatttt cattttttgt tgtgtgtttg atcgctgtat
     8641 ttatttatgt ggcctatctt tttgcaaatg cagatactca aggatatact tttaaagagt
     8701 ataaacctcc acttacaacg caaatttacg acagaaatgg aaaattagta gccaatatct
     8761 ttgaacaaca tcgtttttat gcaagctatg aagaattacc cccgcgtctt atagaagctc
     8821 ttgtagctat agaagatact agcttttttg aacatgatgg ggtaaatatt gatgctattt
     8881 ttagggctat tgttaaaatt ataagaagtg gtggaaaaac catggaggga gcttcaacgc
     8941 ttactcaaca atttatcaaa aatacagaat taacccctga aagaactatc actcgtaaaa
     9001 ttcgcgaagc cttgctcgcc tataaaatgg aaacaatttt aagcaaagag caaattttgg
     9061 aaagatattt aaattatatc ttttttggac atggatatta tggggttaaa acagctgcgc
     9121 aaggatattt tcataaaaat ctaaatgagt taagccttaa agagattgct atgcttgtgg
     9181 gtatgccaaa agcaccaagt agctatgatc ctacaaaaca tttagatctt tctatcgcaa
     9241 gggcaaataa tgttgtagca agaatgtata cattaggttg gatttctaaa gcagaatatg
     9301 atgaagctat gaaagaaatt cctcaagttt atgatgatac tttaacgcaa aatgcagctc
     9361 cttatgttgt agatgaggtg attaagcaat taagtcctag cattaaagat cttaaaacag
     9421 gcggctataa aatcacttta aatatagatt tagatgtgca agaaatggct caaaatgcct
     9481 taaaatttgg ttatgatgaa atagtaaagc gtgataagga tgcaaattta agtacgctaa
     9541 atggagctat ggtggtggtt aatcatcaaa gtggagatgt tttagcctta gtgggtgggg
     9601 ttgattatga aaaaagtaat tacaaccgag ctactcaaag cacacgacaa ccaggcagct
     9661 cctttaaacc ttttgtgtat caagcagcta ttaatctagg ctattcgcct atgagtgaga
     9721 ttgcagatat ttctagaatt tttgaaggtg gagcagggga taataaagac tggaaaccta
     9781 aaaatgatgg aggtaaattc cttggcttga ttaccctaaa agaagcctta acacgttcaa
     9841 gaaacctagc tactatcaat cttgctcttg gtatgggact tgatgtgctt cattcaaagc
     9901 ttgtagaatt tggctttagg gatattccgg ctaatttatc gattgtttta ggaagctttg
     9961 gaatttctcc tttggagtat tctaaatttt atactatgtt tggaaattat ggagttataa
    10021 aagagccaca aatcattaag caagtacaag atagaaatga tcaaattatt atggaattta
    10081 actcaaatga atacagagtg agcgatgaag cgcaaagctt tttggttttg gatatgatga
    10141 gaaatgttgt agagcatggt acaggacgca atgcaagggt tgaaggcata gaaatagcag
    10201 gcaaaacagg aactaccaat aaaaatatcg atgcttggtt ttgtggctta acacctgaga
    10261 ttgaagcttt gatttggtat ggaaatgaca ataataagcc tatgcgttat acagagggtg
    10321 gagctaggac ttctgctccc gtgtttaagg aatttttaaa taaatactta gagaaatttc
    10381 ctgatactac aagaaaattc agcattccaa atggggtata tagaggaagt tataaggggc
    10441 aaaatgctta ttatactatc aaatcacctc tgccaagagc gaatatgaaa tttaatgaaa
    10501 gtgagatttt attttaaaag tatgtgaaga aatagaaaaa tctatttctt ctaaaagagt
    10561 taagcttttt cgataacaat ctcatcattt tttgcatcga taacaatctc atcattttca
    10621 ttaagcttgt ctgcaagtat catatcgctt agcttgtctt cgattaaatc ataaatagcc
    10681 cttcttaaag gtctagcacc aaagtcagga tcaaatccgt ccttagcgat taaaagcgca
    10741 gcattttcac taagacttgc ttttataccc ttattttcca aacttttttg caagtcttta
    10801 aataaaagtt taactatctc atatgcctca tcttttccaa gtggattaaa ggtgatgata
    10861 tcgtctaagc ggtttaaaaa ttcaggttta aagaaatttt ttaactcatt ttttaccgca
    10921 tcttcttgtt cttttccgct taaattcatg atagcacttg aggcgatatt agaagttaaa
    10981 ataataatgg tatttttaaa atccacagtt acacccttgc tatcagttgc cctaccatcg
    11041 tctaaaattc ctaaaagtac attaaacaca tccttgtggg ctttttcgac ttcatcaaat
    11101 aaaagcacgc tataaggttt tctacgcacc gcttcagtaa gctctccgcc ttcctcatgc
    11161 cctacataac ctggaggcgc tcctaagagt cttgaaacgc tatgtttttc cataaattca
    11221 ctcatatcaa agcgaatcat tgctttttca tcatcaaata aaaatttcgc caaagcctta
    11281 gcagattgtg tttttcctac tcctgtaggc cctaaaaata aaaagcttcc tataggctta
    11341 ttgtctgcat ttaatcctgc tttattgcgt ttgatagctc ttgctaaagc gcttagagcc
    11401 ttatcttgcc caatcacact ttcttttaag tgtttttcta cttccaaaaa tttttgcttc
    11461 tctgaagtca gcattttttg cacgctaatt cctgtccatt tgcttaaaat tccagcaacc
    11521 aaatcttcat ccacttgatt tttaagcaag actccatttt cgctcatttt tttccatttt
    11581 tcttctaaat ttgccacttc tttttcgcat tctggaattt tgccatattc taattctgca
    11641 gctttttgga attcaccctt attttttgca aaaacagctt cgtttttaag actatcgatt
    11701 tcttttttct ttgcgcttat gctatcaaaa actgcttttt cattttcaaa ttgtgaattt
    11761 aaagcacttt gtttttcttt taaattggcc agttctttgg caatttcatc tagtcttttt
    11821 tgattttttt catcattttc catctttaga gcttcatttt ctacttctaa agtttctatg
    11881 tctttgcgtg cctttctcaa agagcttggt tcgctttcaa tttgcatttt aagttcagcc
    11941 gcagcttcat cgattaaatc aattgcttta tcgggtaaaa aacgatcggc aatatagcgt
    12001 tttgaaagct tagctgccgc tactaaagca ctatcattga tggtgacatt gtgatgaatt
    12061 tcaagttttt ctttaatacc ccttagcatt gctaaagctt catttacgct aggttcgcct
    12121 acatttacag gttgaaaacg gcgttgcaag gccgcatctt tttcaaagta tttacgatat
    12181 tctttaagag tggttgctcc tatggtgtga agttcgcctc ttgcaagtgc cggctttaaa
    12241 atatttgcag catccatgct tccttcgctt gctcctgcgc ctactatggt gtgaatttca
    12301 tcgataaaaa gtatgatatt ttcactttta atgacctcat ttaccaccgc ttttaatcta
    12361 tcttcaaatt ctccacgata ttttgctcct gcgatcaatg cactcatatc aagagctatg
    12421 acttttttat tttgtaaaga ttttggcaca tcttttttga taattctttg tgctaaagct
    12481 tctacgatcg ctgtttttcc tactcctggt tcacctaaaa gtatagggtt gttttttgtt
    12541 ttgcgtataa gaatttgcat taagcgttcg atttcttctt ctctgcctat aacaggatca
    12601 agctttcctt cacttgcttt tgcggttaaa tctataccaa atttatttaa gctatctagg
    12661 gtttcatcac ttgttttgct ttcgattttg cgtcctgctc ttaaattttg gagctctttt
    12721 tgaaattctt taatatctat aaatttggct aaaatttctc taataggatt tttttcgctt
    12781 tcgcttataa gccaagtatc tacacttaag taattatcac cattggcact cataagtcct
    12841 ttagcacttt ctaaggaatt gataaattca ttagaaaaac gcacattttc acgattgaca
    12901 ttagagcttg ttgcaagatt tgaaattctg cttttgattt caagttctaa agcttctttt
    12961 gaaatattaa atttattaca aatttgattt aaaatacttg aactgtctac aattaaagcc
    13021 cataaaagat gtaaagggac aacttcatta tttttagaat gaatcgccaa agacgctgca
    13081 ctttcaaggt ttgaaagcat attgtcggtt aaaaattctt gtatatttgc cattgtatat
    13141 cctttttcaa gttttatata tgaagtatta tataacttta gtcaaataat gtcaagttat
    13201 tttataaaat ttttgcaata aaattaagta tattttagaa agtattgaat tttaagcact
    13261 taaatagcta ttttacaaac atatcaatag ccttgtttaa atcctctatg ctttgcgtat
    13321 ctttttccat caccgcatga tacatacaat gggctaaatg ttctttaagt atggctttag
    13381 cggtattgtt aaccgctgct ttaaccgcag caagctggat aagaatatca ctacaatcct
    13441 catctctttc aaccattttt ttaatagctt ctaaatgtcc tatagtgcga cttaaacgat
    13501 tacttatggc tttgatatgt tttggagaat gcgtatgagt gtgtttcatt tatattcttt
    13561 cttgctttga aattaaaaaa tataaaatat tttagcatta atttttttaa atccattaaa
    13621 cttataacaa atttagtatt atttacgaat ttttaagcaa aagttattaa aatttgggct
    13681 taaaatattt aattttggag ttcattttga gtagtaaaag atttctagcc gctattacag
    13741 gttttacagg ctctttggct ctttgtgttt ttttagcaag caacctacaa gcaaaaccaa
    13801 agaatccatc tgatttaatg caacaacgct tagagtcttt agataaattg actaaaactt
    13861 tggctatagt tgagcagtat tatgtagatg atgaaaatat tacagatttg attgataaat
    13921 cactttctgg acttttgagc aatcttgatg cgcattcttc ttttttaaat gaaaaagatt
    13981 ttaatgatat gaaaattcaa acaagtggtg aatttggtgg acttgggatc actgtaggta
    14041 tgaaagatgg cgccttgact gttatttctc ctatagaggg aactccagca gataaagctg
    14101 ggattaaatc aggcgatata atattaaaaa tcaacgatga ggctactttg ggaatcaatt
    14161 taaacgatgc agtggataaa atgcgcggaa aaccaaagac gcaaatcact cttactatat
    14221 ttagaaaagg agcaactaag ccttttgatg ttactttaac gcgtgatatt attaaagtag
    14281 aaagtgttta tgcaaagctt atcgaagatg aaaatatact ttatttaaga gttacgaatt
    14341 ttgataaaaa tgttgtggac atgacaagta aagagcttaa aaaacatcct aatgtaaagg
    14401 gtgtaatttt ggatttaaga aataaccctg gcggtctttt aaatcaagct acagggcttg
    14461 ttaatttatt tgtagataaa ggagtaattg tttctcaaaa aggacgcgtt acaagtgaaa
    14521 atcaagagta tacagcaaat ccaaaaaata aaatttctga cagttcttta gtagtgcttg
    14581 tgaatggcgg aagtgcgagt gctagtgaga ttgttagtgg ggctttgcaa gatcttaagc
    14641 gagctataat cataggagaa aatacttttg gaaaaggcag tgttcagcaa attattccga
    14701 tcaatgaaac tgaagcttta agacttacta ttgcaagata ttatttgcca agtgggcgca
    14761 ctatacaagc agtaggtgta aaacctgata ttgaagtatt tccaggaaaa gttaatactc
    14821 aagaagatgg ctttaatatc aaagaaagtg atttaaagca gcatttagaa agtgaattgg
    14881 aaaaacttga taaaaatgag aaaaaagaag acaaaaaaga gcaaaaaaat gataaaaata
    14941 tcattactca aaagcaaatt aatgatgatg cgcagttaaa atctgccata gataccatta
    15001 aaatattaaa tattaaacaa ggacaataat tatgaaaaaa aaagaattac tttatgaagg
    15061 taagggtaaa aaactctata caaccgaaga tgaaaatttt cttataagcg aatttaaaga
    15121 cgatttaaca gcctttaatg ctgaaaaaaa aggaagtgaa agtggaaagg gtgcattaaa
    15181 ttgcaaaatc agcacagaac tttttcattt gcttgaaaaa aatggcataa aaactcattt
    15241 agttgaaacc attagtgata atgagcaagt ggtaaaaaaa tgcaaaattg tgcctattga
    15301 ggttatagtg cgcaatgttg caacaggatc gcttacaaaa agattgggta ttaaagacgg
    15361 cacagttttg ccttttgctt tggtggaatt ttgtcttaag aacgatgagt taggagatcc
    15421 ttttatcaat gatgagcatt gtttgatttt aaatttagta caaaatgaag cacagattaa
    15481 agaaattaaa gaaatggcta aaaaaatcaa tgcgatttta actccttttt ttgatgctaa
    15541 aaatttaaga cttattgact ttaaaattga gctaggttta actaaagaca atgagcttgt
    15601 tttagccgat gaaatcagtc ctgatagctg tagattttgg gataaattta gcaatgaaaa
    15661 gctagacaaa gatagatttc gtcaagattt aggaaatgtt aaaatggcct atgaagaagt
    15721 tttaaaaaga attttaaact aaggaatatc atgaaaatac ttgtcaatgt ttttttaaaa
    15781 aatggtgttt tagatcctca aggaaaagct atagaaaagg ctttacattc tttaaatttt
    15841 aatgaaatca aagaagcaag agtagccaaa caaatcgtgc ttgatttaga tgagagtgat
    15901 gaacaaaaag caaaagaacg cgtgaaaagt atgtgtgaag agcttttggt aaatagtgta
    15961 atcgaagatt atgagcttat tgtaagtgag aaatgatgaa agttgctatt attagatttc
    16021 ctggaacaaa ctgcgaattt gatacccaat atgcttttga aaaacttggt gtaaaagcac
    16081 aaatcatttg gcatgaagaa aaagaaattg atgcagactt agtggttttg cctggaggat
    16141 tttcgtatgg agattatcta agatgtgcag ccattgctaa aatcgctcct gctatgcaag
    16201 gtgttatcgc acatgcgaaa agaggaggat atattttagg aatttgcaat ggctttcaaa
    16261 tcttgcttga aagtggactt ttagaaggtg ctatgaagca caataataat ttaagtttta
    16321 tctccaaaaa tcaaaattta agagttgttt caaatgataa tgttttttta aagaattttc
    16381 aaaaagatga aattatcaat cttcctgttg ctcatggtga aggaaattat tatgcagatg
    16441 aagctacctt gaaaaaaatg caagataaag atttaattct tttaaaatac gaaccaaatc
    16501 ctaatggctc tgtgttggat atcgcaggaa tttgtgatga aaataaaaaa atttttggcc
    16561 ttatgcctca tccagagcgc gcttgcgata aaatattagg taatgatata ggcttaagaa
    16621 tgctcgaagg ttttatgtga gaataatatt ttttttagtt tttgtttgtc tgagtctttt
    16681 tgctcgaagt gaaatttctg tttttgatgg tcaagatgaa aatatgcaaa gagaattgca
    16741 aaaacttcca aaagaggaac agcaaatcta tcaaaatatc gctccaagtg atgaaaattc
    16801 cgattttgat agtaatatat atgatccttt tatacctcaa agttcattag ttcttactac
    16861 tgatgattat gttaataaag tatatgttgg agaagtattt cccatagttc ttcatgctaa
    16921 gattacagag gatacaaatt ttgattttaa catcactttg caaaaaagca aggacttgat
    16981 ctttttaaat cctgatttaa aatgggaata tattaaaggc gattatagga ctgttttgtg
    17041 gtttgaggct aaaacttcaa atgcaaattt agaacagatt tcagtcagcc ttttaagaaa
    17101 tggaaaaatt tttcaaagtg ctagtattag tataggtgct atccattttg aaaatacacc
    17161 taataataaa aatttttcac atcttgtggc aagttccttg gaggttaaaa aaatcaaaac
    17221 cagttatttt gatgattcaa gcattattac aatgattgaa ctaagcgcca caaatgcaaa
    17281 tcttaagagc ttttttgtaa atggagtcga gaaacagggt attgaaaatt taaagggtga
    17341 ttttaattct tctaatgctt tttattatgc tatttttcca tcgactaaaa cagattttga
    17401 attttcttat tttaacaaag atactaaaaa aatggaaaat atgagcttta agcttaaaat
    17461 cagcgatgat gaggtgagca ctcaaagcga tttaaatcct acaaataggg attttaatat
    17521 ttataaacaa tatgctcttt gggctttgac tcttattttg gcattatggt ttgtttggaa
    17581 gaaaaattat tttattttag caggagcgct tttatgtttt atacttggtt ttcttgtaga
    17641 tactaacaca gaaaatgcaa ttttaaaagc gggttctagg gctaaaattt taccaactga
    17701 atcatcaact tatttttata cagcaaattc taacgaaaag gttgaggtgt taggcaaaag
    17761 acttcattat gttaaagtgc tttttcgcga tgataagata ggatgggttg aaagtagtga
    17821 tttacaaaaa aattaaagct ttatattttt ggttcttttt tattataagc gtagcttttg
    17881 ttgtgctatg tttttgtttt atcaaatctc aagatacgct ttggaaactt cgaaaatctt
    17941 gggctagatt tcaaaaaaat attctttttt gcaaatatga agtcataggg gaatttgatc
    18001 ttaaagcaaa tatgatttta atgaatcatc aaagtacctt agatatcata gctttagagg
    18061 atttgtatcc taaaaattta tgttggattg ccaaaaaaga attaggcgaa attcctcttt
    18121 ttaaaattgc cattaaaaaa cctaaacttc tttgcataga tagaaaaaat ccacgcgatt
    18181 tggtgcgtgt tttaaaagaa gctaaacaaa ggcttagtga agatagagtt ttggcgattt
    18241 ttcctgaagg aacgcgttct aggaatgaaa aattgcttaa atttcaaagt ggtgctaaaa
    18301 ttttaagtga aaagcttgat ttaaaagtgc agcctatttt gattgttgat tctgcgaaaa
    18361 ttttagacac taaaagtttt agtgctagtt ctggagtatt gaaaatcatt tgcatggatt
    18421 tagtggatac gagtgataaa aaatggcttg aaaatactag aaaaaaaatg caagaattac
    18481 tagatcaaga aagagctaag ctttgctaaa taccatttta gttgttggtc ttgggggttt
    18541 tataggggcg gttttaagaa tgctttctat caatttgata aataaaattt taccccattc
    18601 tataagcttt ggtactcttt ttgttaatgt cttaggatct tttatgatgg ggcttttgtt
    18661 ttcttatgca catcataagg gtttatctcc tgcgctcaaa agctttataa gtacaggatt
    18721 tttaggagct tttacaactt tttctacatt ttcttatgaa aatttactgc ttttacaaag
    18781 tggaaattat tttaattttt ctttaaatat tttattaaat ataatccttt gcctgatagc
    18841 agtttggctt ggttttataa tttttaagta agctcttgaa atttacctta gaatttgtat
    18901 tttttgctaa aatatctgtt tcaaaattta taaaggagaa aaaatgcagt ttcaaactga
    18961 agtaaatcaa cttttacaat tgatgattca ttccttatac tcaaacaagg aaatattttt
    19021 aagagaactt gtatcaaatt caagtgatgc tttggataaa cttaattttt taagcgtgag
    19081 tgatgataaa tataaaagtt taaaatttga acctagaata gatattaaaa tcgataaaga
    19141 taagaaaacc cttactatta gcgataatgg tataggtatg gataaagatg atcttattaa
    19201 caatcttgga accatagcaa aaagtggtac aaaaagtttt ttagagaatt taagtggtga
    19261 tgcaaaaaaa gattctcaac ttataggaca atttggtgta ggtttttatt ctgcatttat
    19321 ggtggctagt aaaatcgaag ttttaagcaa aaaagcttta gatgataaag cttatctttg
    19381 gatttctgat gcaaatggct atgagattga agatgcgact aaagaagagc aagggacaag
    19441 tattacttta tatttaaaag atgatgaatt tgcaaattct tataaaatcg aaagtattat
    19501 agaaaaatat tcaaatcata tccaatttcc aatttttatg gaaaaagagg aatttatccc
    19561 tgctaaagag ggcgaggaag aaggaaaaac cgagcttaaa atttctcaaa ttaataaagc
    19621 taatgccttg tggagaatgc aaaaatcaag ccttaagaca gaggattatg aaagatttta
    19681 tgagcaaaat tttcacgatt ctaacaagcc tttgctttat cttcatacta agagtgaggg
    19741 aaaattagaa tacaattctt tattttttat tccgcaaaat gcaccttttg atctttatcg
    19801 tgtggattat caaagcggat taaaacttta tgtaaaacgc gtatttatca gcgatgatga
    19861 taaggagctt ttaccgactt atttgcgttt tgtgcgcggg attattgatg tagaggattt
    19921 accacttaat gtaagccgtg aaattttaca agaaaatcaa attttaaaag gcgtaaaaga
    19981 agccagcgtt aaaaaaatac ttagcgagct tgaaaaactt aaaaataaag ataaagaaaa
    20041 atatttaagc ttttttaaga attttggcaa agtgttaaaa gagggacttt atggttttgg
    20101 tggcgaaaaa gacagtcttt taaaactcat gctttataaa agcactaagg gtgaaagttt
    20161 gcgctcttta gaagaatata aaaatgatat acaaggcgag caaaaagaaa ttttctatat
    20221 cactggaaac aatgaaagct tgcttagaaa ttcaccttta cttgaagaat ataagcaaaa
    20281 aaatatagaa gtattactta tggatgatga gattgattct ttgattgctc ctatgcttgg
    20341 agaatatgaa ggcttgaaat ttatagccat taatcaagtt gaagataaaa atgaattaag
    20401 cgatgaggaa aaaaatgaat ttgctccatt ggtggctaaa tttaaagagc ttttaaagga
    20461 tcaagttgaa gatgtgagac ttacaagtcg tttaaaagat agtccaagtt gtattgttta
    20521 tgataaaaat aagcctgatt ttgcaatgca gcagctttta aaacaaatgg gacaagaaca
    20581 aaactttaaa cctattttag aaatcaatcc aaaacacgcc atttttacag gtcttaaaaa
    20641 taatgaaact tttagtgctg atatagcaac cttagtttta aatatggcaa aacttagcga
    20701 aggtatgggt gtggataatc cggctgaatt taatgcaagc cttacaaaaa tcatcactaa
    20761 ggctttctca tgattacaaa tctcccagca agtgtttgga tgaagcagga tttaagcgaa
    20821 tatcaaattt ttgatgttcg cactccagct gaatgggagg agggtgtttt acctcatgct
    20881 gaatgtgtag ctttgtatga taatcatggg cttttaaatg ctaatttttt agaagaattt
    20941 caagcgagaa gaaatgaaaa taaaaaactt gcttttattt gtcgtggagg tcatagaagt
    21001 atgatggctg caaattttat taaaaatgaa ctcggtttag aaagtgtaaa tttagatggt
    21061 gggatgttgg cattaaaagg cttgatatga taggacttta tttgttgata gcagcgttat
    21121 cttttttact cctttatttt gcacttaaaa aacttacttt aaatatagat gaaaaggcct
    21181 tgcttgagcc tataaaatca gatatttatc ccaaattttg tgatattatc gatgaaagaa
    21241 ttagagaatt taaggatggg gttcaaaata atagttttac cttaaaagat caagataaaa
    21301 aagatgaatt attggaaaaa ttaggggatt taaacagaga gcttaccttc atacaaacaa
    21361 tgaatttaag caataaaagc gatagtgtat ggcaaagtga gctttttgat tttttaaaag
    21421 agcttgaaaa attattgctt gaatatttgg aaaatggcga agaagaggct gaaaatttaa
    21481 gagaaaattt gatgaatgaa tttgaaaagc ttagaggcta aggtgcaaga acgcaaaaac
    21541 tttttaaaat atctcaagat gactttttgg ggtattttta ctttggtttt aatctttgct
    21601 ttaattcgat ttagtgaatt ggctaattta ttggctggag ttgcaatttt acttatagga
    21661 atgaccaatt taagcctagg atttaaatct tttagtggcg gcttgcttga aaaaattctt
    21721 actcactcga caaatacaaa acttaaaagc atactttttg gtgctattag cactcttatc
    21781 atgcaatctt caactttagt ttcgattatc tctctttctt ttttgagcgc aggactaata
    21841 tctttagttg ctggtgtggg tattattttt ggtgcaaatt tgggaaatac tgcaagttca
    21901 tggttgattg tttggcttac aagagttaat atttctatct tggctatacc tttgctcgta
    21961 attggagttt tgtttttctt tcaaaaagat aatatgatta aaagttttgg aaatattttt
    22021 ataggtatag gttttttctt cttaggagtg gattatataa aaaatggttt taatgaattt
    22081 caagatgcta tagatttgtc ttattttgat tttacaggtt ttaagggagt gttgattttt
    22141 gtaggtcttg gggctttgct tacaggtatt attcaatcaa gcacagcaac aatagccatt
    22201 atagtcgcag cactattgac agggcaaatc agttttgaaa attctttagc agcgactttg
    22261 ggtacgagtg taggaggtgt ggtaacagct gtgctagctt ctttaagtac taatgttgag
    22321 ggcaaaaagc ttgcttttgc aaattgtatt tttaatttta ctattgcaat tataatcata
    22381 cttatttttc cttattttat tgatttttta aatgggatgg caaaaatttt aaatatagaa
    22441 aatttagctt taaaaatggc cttatttcat actttgttta atcttttagg aatatttatc
    22501 tttgtattgt ttatcccaca attggtaaat tttttaaaca aaatcgttaa agcacctaaa
    22561 gataaaaata aagatcgacc cttatatctt gaacctagtt tattgaaatt tagtgataca
    22621 gctatcgaag ctttgcaaaa agaaagtgaa catctttatg ataatgcgta tgcgattatc
    22681 gctcatgcta tagggttgag tcgtaaagat atacaaagca ataaaagctt tgaagaaatt
    22741 ttgcaaaata aaaaatggtt tagtaaaaat gtggatttgg attatttgta tcaaactaga
    22801 atcaaagtgc tttttgaagc tatcattgac ttttcaacca aagcgcaaat tcacatagat
    22861 gatgaactta aaaatcacag aatttttact tttaaaatcg ctgctaaaaa tcttacagag
    22921 gcaactaaaa atttaaaatt agttcaagaa aatatcaaaa aatactctaa ttgcggtaat
    22981 aaagatttgg ccttagaata caataaaata agatctaatt taggagaatt gctaagaagt
    23041 attcaagagc ttagaagcgt ggacgatgaa aaagtgtatt tgattattaa aaatcttcaa
    23101 aaaggtaagg aaattctaaa agaaattgat ggtttaactc ttaataatgt cgaacatctt
    23161 attttagtta gaaaaatcac taccgcagag ggtatatcta taattaatga tacaagtttt
    23221 attgctaaga ttgctaaaga tcttatagat gccgttgaaa tcattttcgc aagagaaaag
    23281 gtgctttggg atgatattaa ttaagagttt gattattttc tgtgatgata ggggttagaa
    23341 aatcttcatt gattaaaata tctacaacat ctttaaacat aggcaaagca ctttgagcag
    23401 catagtaact ataaggcttg gtagggtttc ttactaaaac ccctatggta tagttatgtt
    23461 ttgtatcgtt ggcaaaaccg aaaaaagaag cattatagcg attggaggta tagccttgtc
    23521 tttctgcaat acgcgcagtt cctgttttac cccctacgat tataccttga gtgatagctt
    23581 tttttcctgt acctttttct ataacatcaa taagaatttt ttgcatggtt tgcgctgctt
    23641 gcggggttaa aataacttct tttttgatat cctcttcaag acttacaaag cgtccatctt
    23701 gatagaattt ttcagccaaa tgcggagtga tgtaaactcc attgttatta aaaacattat
    23761 aagcagcaag tagttgtata aaggttgttt ttaagccata tccatagctt aataccgact
    23821 tttctatatc tcttaagcgc ttggaattag ggatttctcc tttttgctcg taaggcaagt
    23881 caattccgct tttttcgcca aatttaaaaa ttttaagtcc agcaatgatt tcaagattac
    23941 tcaatctttt cgcaatttgt atcataccta tattagaaga atatctaatc acctcttcca
    24001 tagtcatttg atccatttta tgatcatctc taatagtgaa acgccccagt ttataagctc
    24061 caccataggt gttaattact tcatctgtct tgagtttgcc aagtcttaga gcagttgtaa
    24121 aaataaaagg cttgataacc gatcctgctt catatccata ctctatagcg cttgcattta
    24181 aaacagataa atctttaccg cgattttggg gatcataacg cctagaactt gccagagcta
    24241 gaatttgacc tgttttacta tccataactc caactatgat ttcattagct tttaaatctt
    24301 catttcttcc atcaatcgct ttttcaatgc ttttttgaag ttttaaggat atattaagat
    24361 ataaaagaca gccatcaatc tttttttgct gcaatgagtt taaatttaag attatatttc
    24421 cacctatatc ttttaggcct tgaatttttt cattttggag tggacttaag cagtcgtcat
    24481 agtatttttc aagtcctttt actccaacat tttttaaaat tccgctttga ggatctaaaa
    24541 ccattttagt ataacctatg gctggagtta aagcatcttt agacatataa attctatctt
    24601 cttcatgttc gataatgctt aaacctcttg tttcaacctt tcctaggtta ttggtaaatg
    24661 ctttaaaaaa tccttgtata taaagctttt ttgcaagatc tctaagatag cttgcttgtt
    24721 tagaatctaa attttgagaa aggataaaat gataggatcg ttttttctgt ttttgaattc
    24781 tttttttaat atctgcaatt tcatcatcgc taattccact atatatttga aaaagcttta
    24841 aaaataaatc aaatttatcc ttattgatac ttcttaaatc aatttctgcg cgataaattt
    24901 gccttgagct tgtgatagta aaattatctt tagtgatgat atttccgcgt aaggcaagag
    24961 agtattgatc tttttcagtg ttggggatat ggcgctttga agtgagaaaa aaggtagagc
    25021 taagaaaaat gatcataaaa aaaagcgcca tgcagtaagc aaaggcgact tttgaaacac
    25081 gatttttctt atgctcttgc atacagctta aatttgtgtt cttgtgattt ctttataagc
    25141 gctgatagct ttatttcgaa cctctagcat aaatttcata ctgctttcag cttttgtgat
    25201 agcaatagct gcttggtgta aatcttttac ctgtcctgtt gcaatatctg tcatcgcagc
    25261 ttctgcagtt ttttgagttt tatctaaatc ttcgatttcg tttttaagca ttttagcaaa
    25321 ttcgtcgccg attttatcat tagaattttg gcttttgttt gcatttgaaa tgttattatt
    25381 taatcttaaa tcattaatat tattcatatt ttattatcct cttaataaat caatcgcact
    25441 ttgagctatg gtttttgcac ttgtaaaagc actaacatta gcttgataag ctcttgttgc
    25501 ttcaatcaaa tctgccattt cgatgacagg atttacattt ggatatgcta catagccttg
    25561 cgcattagca tcaggatgag aaggatcata tttcatacga aaatctttat catctcttac
    25621 gactttatct acaacaacgc tttgtatagc aggctttgcc tcttcaggtg agcttggatc
    25681 atttaaagga ttttcatatt ttaaaaagtt attgtcctta ttaatttgct cgtttaaaag
    25741 cttatcaaaa tctgtcgctt taaagatcac ttcgcgtctt cgataaggtc cgccttcagc
    25801 tgttcttgtt gtgtttgcat tagctatatt ggagctaata acattcattc taaagcgttg
    25861 cgcacttaaa ccatatccgc taatatcaaa atcacttaag tatgccataa tttaccttta
    25921 acttaattta gaacttgcat caagtataga gctaaaaata ttactttgtc ttcttaagac
    25981 cccatcaaga gctgtaatca tcactgtatt tttactcatt tcagttgtct caacatctaa
    26041 atccacagta tttgcatcat ttcttgctaa atgtccatcc cttagataaa tagtagattt
    26101 gctaggatct gggaatttcc aaggtttttg atgtccttct tcagttattg ctaattgtaa
    26161 ttctttatta tcattttttt taaagatttc atttgcacga tttactaaag cagtttcaaa
    26221 ttcaatatct cttgctttat aaaaaggagt gtcaacattt gcaaggtttg cattgatgag
    26281 ttgatttctt aaatttctac ccgctaaagc acttgtgata agttcttttg atttgaatgg
    26341 gttaatcatt ttttatcctt tttataattt caaaaattaa caagcaaata ctgttccaac
    26401 ttgcataaat ttttgcaatt ttagttattt gtttttttgt gattgaatgg ctttattatg
    26461 atcattgaga ttggtgctaa aaatatgcgc ccctgtggtt ttatctctta caaaatataa
    26521 ataatcagtt tttgcaggaa agatagcagc acgaattgcg gataaagaga cattacaaac
    26581 tgcttcttta ggcaaacctt caaatttata agtattataa gagctattat cttctcttat
    26641 tctttgagga gtgatttttg tatgagaata aaatccatag tttaaggttc catccatttg
    26701 gagcttcata ccttttttta tacggttata aataacgctt gcaactatag gcatttcgct
    26761 ttcattagcc gcttcttttt gaatgactga tgctgttatg atgtattggt gccatttttt
    26821 ggcattgtat tcgccaaaaa ttttctccga agtttttcta tttgaatttt ctgcatgttt
    26881 gagcaaaact tgaaccaaaa gtgcttctgt gattcctttt ggaattttgt aagtttcagg
    26941 aagaaaaacc ccttctttat atgtagcttg tttttcaaat tcggctaaaa gcgtgttttt
    27001 atcaagttct aattgttttg cagcttgctc taaaaaaatc acactggttt ctccagggat
    27061 gagagtaagg gtttctaatg ctgctttagc tatggtgagt ttgtgtaaaa attctattct
    27121 attgagttct tttgtgccta tatttatcca gcctgattga ggatgaccca agaaaaataa
    27181 gatatattta tcaatcgtgc tcatttcata tttattttgt tttagatgtg ttataatttg
    27241 agcaatggaa ccttgaggca aaaaaacaac agaattgctt tttaaaggtt gtgttaaata
    27301 ataaaaaatt cctaaaataa atatcaaaaa gaagtttcta atgaaaaaga aaattgtata
    27361 tgcattactt gttttaattg tatttatctc agttgtattt ttagttctta agaatggtat
    27421 tctcatatct catatccaat ttagtttttt aaatttggag caattatata ttaaattaga
    27481 taaaaaactc attgtgcgag caaaaaatat cacatttaat gaagataaca atgcaagtat
    27541 tcaggatgat aagaatgtaa attctgactt tgcttctaag gaattgttaa atattactaa
    27601 aaatttaaaa tatctttata cttttgttga ggaaatagac atacaaaatt tcaatatcaa
    27661 agataatcat atgcgtatat tgtttaaaaa tgatgaattt tttgtagata atgatttatt
    27721 gtttttaaaa cttgcgctac acagagaagg aaaggaaatt aatgctgata ttaaaaatct
    27781 tttgcttaaa gattataatt taagcataga tggaaattta agtattaatg caaaaagtga
    27841 attttataat tttaaaggcc aagcaaatag tgatttggct gattttaaga taaatatttc
    27901 ttacaaaaat caaaacctag cctataaatt tgaagatatc aatattagag atattaccac
    27961 tatcttcaat caagcaaaaa aaagaatagc attgcccgaa cctttagttc tttgggttgc
    28021 gcatagggct aaaggagatt tttatcattt tgattttatt caaggtttta ttgatttttc
    28081 taaaaataat tattattttg atgatatcag tgcttggggt tatgcaaata atgtaaaagt
    28141 tcgtttggat aatcaaatga atgctattaa ttttccaaaa cttgatttaa atttaagcaa
    28201 tcaaaaatta aattttacct tcaataaggc aagttataat gaatcagatt taagtgaaag
    28261 caaggtgttt ttatatgatt tatttgataa taaaaagcat ggaatttact tgcgtatcaa
    28321 atctaaaaat ttaaaatttg atgaaaaact tgctaaggca ttaaaaaatt atgatttaaa
    28381 tttacctttt taccaaaaaa atggaaaact tggaagtgat ttagagctta taatcgattt
    28441 taacgaaaag ggtgatgtaa aatataatgg cactttgtct ttagaaaatg cggagctttc
    28501 attagcaaat tttagcgtgg ctagagcttt tgttaaatta aatcaaaatg ctttgagtat
    28561 agaaaatgca agcgtaaaaa atgagttttt ggaagcagat tttaatgcta aaatcgatct
    28621 agctacccat aagggtattt ttgatactca aatttcaaga ttatattttg acaatggcga
    28681 gctttttgat atgagaaatc aaaaaacaaa gataaattta gactatacag atgatttaca
    28741 gcttagtgtg ccagaatggg atttgacttt aaattttaaa gaaggacttg aagcatatgc
    28801 aaacaatcct aatattttaa tccctcattc gcctttatta aaaaaattcg gttttatggg
    28861 tgcaaaaagt atttattata aaagtgtaga ctttaatgat tttaatgcgc aaatacagga
    28921 tgctcatttt aaaaataact tattggttaa taacaagcct tacgaaaatg atagctttgg
    28981 tattgttcgt aaaagcggtg ttttaaacat aaatacacaa agtggtttag ctaatgttaa
    29041 ggttattgat aataataaaa ccatacatct taaaaattta acttatattt accaaaaaga
    29101 tgaaaatgct tctacttctt catttgatat agcaaaaaat actcaaaata ttatacttaa
    29161 tggagaaaat ctcactttga ttttagcaga ttttaacaaa actctaaatt tcgataaaat
    29221 ggaggcaaat ttaaaaagtg atatcttaga tgctagggct actcgcaaga atgcaaattt
    29281 tgatcttcat tatagtccta atgatttgaa attatttatt aaaaatataa acgatgaaca
    29341 tctgaatgaa tttttgcaaa aacgggctgt gcaagagggt gtctttaatt ttagcgtgat
    29401 aggtagtggc ctagattatt ttgaggggga atttaatttt aaagatacct ttataaggga
    29461 tcttaaaggg gttaatcagc ttatatcttt tatcgatacg gttccaagtc ttttgatgtt
    29521 taaaactcct acttttaatg aaaaaggttt aagtttgcat gatggaagag ttgtttttaa
    29581 tcgtaaaaag gatttgttaa gttttgaagc gattaattta aatggcaaca gtatggattt
    29641 gtatggttta ggcagtgcaa atttaagatt aaataccata gatatagatt tagaattaaa
    29701 aactttaaaa tcagcttctg aaactatttc aaaggttccg attttaaatt atgttatttt
    29761 ggggaaaaat caagagataa gcgccaatat aaaagtcgat ggcgctttag atgatccaaa
    29821 atttcacact caaattttaa gcgatacttt aaaaacccct tttaatttga ttaaaaatat
    29881 catacaactt ccttctaatt tgtttaatta aaagtgttta aagtttgttt taaaactaaa
    29941 acaaacttta aatttactct tgcatttttt tttaattgta atatacttta gattgaaaaa
    30001 taaaattagt gtttaaaagg acagaaaatg caagttactt acactttgac agatgagtct
    30061 ccagcacttg cgacctattc gtttttacct atagtaaaag cttttttaag caaggcgcat
    30121 ataggagtaa aaacttctga tatttcgcta tctggaagaa ttttagctac ttttagtgag
    30181 tatctaaaag aagatcaaag atgcgaagat gctttggagc ttttgggtga gctcgtaaaa
    30241 aaatcagatg caaatttaat caaaactcca aatatttcag cttctattcc acagctgaaa
    30301 gctgctatta aagaattgca ggaaaagggt tatatgttac caaactaccc agacgaacca
    30361 aaaaacgatg aagaatttca aataaaagca aaatatcaaa aagttttagg ttcagcggtt
    30421 aatcctgtgc ttagacaagg caattcagat cgccgttcta ctaaagcggt aaaagattat
    30481 gcaaagaata atccttatcg tgtggttgag tttaatccta attctaaaac tcgtgtatct
    30541 tatatgaaag aaggtgattt cttttctaat gaaaaagcgg ttttaatcga tgaggattgt
    30601 gtagcaagta ttgaatttgt tgcagatagt ggtaaaagtg aaattttaaa agaaggctta
    30661 aagcttgaaa aaaatgaaat tttagatgca acctttatgg atgtagaaaa attgcaagat
    30721 ttttatgcta aagaaatcaa agcaagcaaa gataatgatt tacttttctc tcttcattta
    30781 aaagctacga tgatgaaagt aagcgatcct atactttttg gttatgcggt aaaaatcttt
    30841 tttaaagaat tatttgatga atttaaagat gaatttgaaa cacttggaat caatccaaac
    30901 aatggattga gcgaactttt aagcaaggtg caaacttcaa gcaagaaaga cgaaatttta
    30961 agaagataca acgaaatttt aaacagtcgt gctgatattt ctatggtaaa ttcagataag
    31021 ggtatcacca atttacatgt tccaagcgat gttattgttg atgcttctat gcctgctatg
    31081 cttaaaaatg gtgcaagatt atgggataaa gaaggcaaag aaaaagacac aaatgcagtt
    31141 atccctgatc aaacttacgc aactatttat gaagcggtta tcgaagattt gcataagaat
    31201 ggcactttaa atcctgcgaa attaggcagt gtatctaatg taggtttgat ggctaaaaaa
    31261 gctcaagaat acggctcaca tgataaaaca tttgttgcta aagaagatgg agtgtttaaa
    31321 atcattgcca aaggtaaggt tttattagag cataaagtta gaaaaggtga tatttataga
    31381 gccaatcaag ctaaattcga cgctgtttta aattggatcg atttgggtat agaaagagct
    31441 gatttgacag gagctgaagc gattttttgg ctagacagta aaagagctag taataaaatt
    31501 atgatagatt tagttcaaaa ccgtcttaag gaaaaaaata aaaatatagc tatccttgct
    31561 ccttatgaag cttgcttaaa aagcttagaa ttgattcgtg ctggaaaaga tgctatttct
    31621 attacaggaa atgtcttaag agattattta accgatcttt ttcctattct agagcttgga
    31681 acaagtgcta aaatgctttc agttgtacca atgttaaatg gtggagctat gtttgaaacc
    31741 ggagcaggag gttcagcacc aaagcaagta gaacaattag tcgaagaaaa tcatttacgt
    31801 tgggatagct tgggtgaatt tttagcccta caagcaagct tagaatttta tgctaataaa
    31861 tgcaataatc ataaagctaa agtcttagca gaatgtcttg atgaggctat aggtgaatgg
    31921 cttgaaaaca ataaagctcc atcaagaaaa gtaaaagaag atgataatcg tacaagccat
    31981 ttttatttag caatgtattt tgcaaatcat ttggcaagac aagcaaatga tatggagctt
    32041 caaagctttt ttaaagatat tgccttagag ctttcctcta atgaagaaaa aattagagcc
    32101 gaatttaatg atgcacaagg tgtgaaagtc gatttgggtg gatattataa atttgatgat
    32161 gagaaagcaa ataaaattat gcgcccaagt gcaactttta atgctatcat agaaaaaata
    32221 ggacaaagat gaaaatcaca atcatcggtg cagggaatgt aggctcaagc gtagcctatg
    32281 ctttaatttt gcgtgaattg gcaaatgaga ttgttttagt tgatatcaat gaagatttat
    32341 tgattgcaag ggaattagaa ttatcccaaa gcatagctgc tttaaattta gacatagaat
    32401 taacttgtac taaggattat gcttatacaa aaaattctga tattgtgctt tttagcgcag
    32461 gatttgcaag aaaagatggc caaagtagag aagagctttt gcagctaaat acaaacatta
    32521 tgcttgattg tgctaaaaaa attaaagaat ttaatcctga tccacttttt atcattttaa
    32581 caaatccggt ggattttttg ctcaatactc tttatgagag tggaattttt tcttctaaaa
    32641 aaattgttgc tatggcaggg gttttagaca atgcaagatt taagtatgaa gtagctaaaa
    32701 agttaaaagc tagaatttca agtgtggata caagattaat tggttttcat aatgatgata
    32761 tggttttagt aaaatcttat gcaagtgtta aaaatcaaaa actcggagaa cttttaagcg
    32821 aagaagaatt tgaggatttg gaaaatgaag ttaaaaccgg tggagcaaag gtgattaaac
    32881 atcttaaaac ttcagcatat ttggcacctg caagcgcttg tgtaagaatg ctcgaatcca
    32941 taagaagtgg agaattttta cctatgagtg tgattttgca tggagaattt ggagtgcaaa
    33001 ataaagcttt aggtactatg gcaagattgg gtttagaggg cgttgttgag attatgaagc
    33061 ttgaacttag cgacgaagaa aaagacaagg taaaaaaatc attaataaaa tatcaatata
    33121 taaaggaaga taaatgaata tacatgaata tcaagcaaaa gcgatttttg cagacaatgg
    33181 tatccctact ttaaagggaa aggttgcatt tagcgtagaa gaagctgtag aaaatgctaa
    33241 agaattaggc ggtagcgttt gggctgtgaa agctcaaatc catgcaggtg gtcgtggtct
    33301 tggtggtggt gttaaaatcg ctaaaaattt agatgaggta aaggcttatg caagtcaaat
    33361 tctaggtatg aatttggtta ctcatcaaac aggacctgaa ggtaagctcg tgcaaaaact
    33421 ttatatagaa agtggtgcaa atatagtaaa agaatattat ttggctattt tatttaacag
    33481 aatggcagaa caaattacaa tcattgcttc aagcgaaggg gggatggata tagaaaaagt
    33541 ggctaaagaa agccctgaaa aaatcgcaaa agtaggcatt gatccacaaa ttggctttaa
    33601 aatgtttcat ggacttgaag tagcgagagt tttaggactt gataaagatg aaagcaaaaa
    33661 acttatttct atgatagcaa aactttataa gctttatatg gataaagata tgaatatgct
    33721 tgaaatcaat cctttaatta aaactgcaga aggagatttt tacgctcttg atgcaaaatg
    33781 tagttttgat gacagtgcac tttatcgcca tccagagatt gccgaactta gagatattac
    33841 tgaagaaaat cctgctgaaa gagaagcggc tgaatttggt ttaagttatg taaaattaga
    33901 cggtgatgtt gcttgtatgg taaatggtgc aggacttgct atggcaacaa tggatattat
    33961 caattatagt ggtgcaaaac ctgcaaactt cttagatgtg ggcggtggcg catctgctga
    34021 aacagttgca aaagcttttg aaatcatttt aagagataaa aatgttaaag taatatttat
    34081 caatattttt ggtggtattg ttcgttgtga tagaatcgca aatggtattt tggaggcaac
    34141 taaaaatgtt gaggtgaaca ttcctatcgt agtgcgtctt gatggtacaa atgcagctga
    34201 agcaaaagcg atcttagata gttcaaatct taaaaatatc aaagcagcaa ccaatcttaa
    34261 aaatggtgca gaattagtaa aaagtttagt aggataagga taaaaaatga gtatattggt
    34321 taataaaaat acaaaagtaa tagttcaagg ttttacaggt aaagaagcaa cttttcatgc
    34381 agagcagtgt atggcttatg gtacaaatat agtcggaggt gtaactcctc ataaaggtgg
    34441 tcaaactcat cttggcaagc ctgtttttga tacagttgca gatgcagtta aagccacagg
    34501 agctgatgta agtttgattt ttgttcctgc ttttgcagta ggtgatagtg tgattgaagc
    34561 agcggatgca ggcattaagc ttgctgttgt aattacagaa catactccgg ttaaagatat
    34621 gatgtttgcc aagcagtatg caaataaaaa aggcatgaaa attataggac caaattgccc
    34681 aggaatcatt acttctgaag aatgcaaatt aggcattatg ccaggcttta tctttaaaaa
    34741 gggttgcgta gggcttattt caaaaagtgg aactttaact tatgaagcag ctaatcaagt
    34801 agttcaaggt gggtatggaa tttcaacagc agtaggcatt ggtggagatc ctatcatagg
    34861 acttgcttat aaagaacttt taagtgaatt tgaaaaagat aacgaaacaa aagctattgt
    34921 tatgataggg gaaatcggcg gtagcttaga agtagaagca gcaaaattta ttaaagaaaa
    34981 tattagcaaa cctgtggtag cattcattgc gggagcgact gcgccaaaag gtaaaagaat
    35041 gggacatgca ggagctatag taggtagtgc tgatgaaagt gctgcagcta aaaaagaagc
    35101 attaaagtct tatggaattc atgtagtgga ttctccagct ttaatcggtg aagaaataca
    35161 aaaaatatta ggctaaaaaa ggaaaaagat atgagtatag cagctccaaa agatacccct
    35221 gtttgggtag atgagcatag atgtaaagct tgcaatatct gcgttagcta ttgccctgca
    35281 ggggttttag ctatgcgcga tgatgttcat gcggttttgg gacaaatgat agaggttgta
    35341 catcctgagt cctgtatagg ttgtactgag tgtgaaacac attgtccaga ttttgctatt
    35401 atggtggcaa aaagagatga atttaaattt gccaaactga ctccggaagc taaagacaga
    35461 gccgtagcag taaaaaataa taaatataaa aaattagcat aggaaagaca atgagagaag
    35521 ttatagcaac aggtaatgtt ttgattgcaa aagcagcaat tgattgtgga tgtaaatttt
    35581 ttggaggtta tcctattaca ccaagttctg aaattgcaca tgaattaagc catatgcttc
    35641 ctgcaaatga tggaactttt atacaaatgg aagatgaaat ttcgggtgta agtgtgacta
    35701 ttggtgctgc tatgagtggc gtaaaatcaa tgaccgcaag tagtggtcct ggaatttcgc
    35761 ttaaagcaga gcaaatcggt cttgctttta tcgctgaaat tccacttgtt attgtaaatg
    35821 ttatgcgtgg tggtccttca acaggtcttc caacaagggt ggctcaaggg gatttatttc
    35881 aagcaaaagc acctactcat ggggattttg ctagtgtggc tatcgcacca gcgagtttag
    35941 aagaagctta tacagaaacc ataagagcgt ttaatttggc tgaaaagtat atgactcctg
    36001 tatttttact tatggatgaa actgtagggc atatgaatgg taaagcggta ttgcctgatt
    36061 taaaagatat agaaattatt aatcgtaaaa aattcacagg cgataaaaaa gattataaac
    36121 cttatgcagc gggcgaaaat gaacctgcaa cactcaatcc attttttact ggctatcgct
    36181 atcatgtaac cggacttcat catggagata taggttttcc aacagaagat ggcgctatag
    36241 ttaagaaaaa catggaaaga cttataggta aaattaaaaa caaccaagat gatatttgta
    36301 cttatgaaga atatatgctt gatgatgctg aatttttaat catagcttac ggaagcgtaa
    36361 gtcgttctgc taaagaagct atcaataggc tcagagaaga gggtattaag gtaggacttt
    36421 tccgccctat cacactttat cctgtagctg aaaagaaaat tgctgaagtg gcaagcaaat
    36481 ttaaaaaggt aatggtaagc gaattaaata tgggacagta tcttgaggag attgaaagag
    36541 taagttctcg tcgtgatttt attagcttac atcgtgcaaa tggtcgtcct ataacaccta
    36601 gcgaaatcat tgctaaagta aaggagaata tataaaatgg cgtttaatta tgatgaatat
    36661 ttaagaactg ataaacttcc tactcaatgg tgttggggtt gtggcgatgg tgtagtttta
    36721 aaatgtatta tccgcgcgat agaaaagctg ggttggaata tggatgatgt ttgtcttgtt
    36781 tcaggtatag gatgtagcgg tagaatgagc tcttatgtaa attgcaatac cgtgcacact
    36841 actcatggta gagctattgc ttatgcaaca ggcataaaac tagccaatcc tagcaaacat
    36901 gttattgtag taagtggcga tggtgatact ttagcaattg gtggaaatca tactatacat
    36961 ggatgtcgta gaaatataga tttaactcat attgtaatca acaattttat ttatgggctt
    37021 actaattctc aaacttctcc aactactcca aaaggttttt atacagtaac tgcacaattt
    37081 ggaaatatcg atccaaattt tgatgcttgc gaattaacta aagccgctgg agcttctttc
    37141 gtggcaagag gaaatgttat tgaggcaaat aaattagaaa atttaattta taaagcttta
    37201 gcacacaaag gttatagctt tgttgatgtt ttctcaaatt gtcatattaa cctaggtaga
    37261 aaaaataaaa tgggtgaagc agtggctatg cttgattgga ttaaaaatcg tgttgtggat
    37321 aagtctaaat ttgaaagcat ggattttgaa gaaagaaaag ataaattccc aacaggtgtt
    37381 ttatatgaag atagcacgca gccagaatat tgtcatgctt atgaagaagt gcgtcgtgca
    37441 gccaaagaaa aaagaatggt tgatttagga gccttaaaat gaaatatcaa ttaagatttg
    37501 gtggcgaggg tggtcaaggt gttatcaccg caggagaaat tttagctgaa gcagcgatta
    37561 aagaaggtcg tcaagccttt aaagcttcaa cttatacttc ccaagtgcgt ggaggtccga
    37621 ctaaggttga tattatcatc gatgataaag aaattctttt tccttatgcg gtagagggcg
    37681 aagtagactt tatgctttca actgcagata agggttataa aggttttcgt ggcggagtaa
    37741 aagagggtgg catcatagtt gtagaaccaa atttggttca tcctgaaagc gaagattata
    37801 aaaaatggca aatttttgaa attcctatca ttactatagc taaagatgag gtaggtaatg
    37861 tagctactca atcagttgtt gcactagcca tagctgctta tatgagtaaa tgtattgatt
    37921 tggatattct taaagaaacg atgcttcata tggttccagc taaaacaaga gatgcaaatt
    37981 ctaaagcttt tgatttgggt gttaaatacg cacaagaaac caaagctcat tcttaaataa
    38041 atttgggttt attcccaaat ttattgcttc ttgaaataaa tttttaaact ttttcatttt
    38101 ttaatttagc tacttttaac gattaaaatt ttataatcaa aaacatattt attaaggaaa
    38161 ttcaatggat atttttgacg aaatgtttaa taaaactcct aaggaaaaat ttatagaaat
    38221 tatacaaaat ggaaatttag gagctttaga aaaagtattt gaaaactttt ttgctgatca
    38281 tattgctatg atcgagcttt tagaaaaaca aggttttaat gaaatggata tgaaaagctt
    38341 tatacttgaa aatggagatt ttattcaaga aaggcaaaac gatcttttta tagaattagg
    38401 tgctaaaatt ttaggacatg agggctaatg agcattaggc ttttggtttt ttttactttg
    38461 atggcaaatt gcattgtttt aaatgctgct cctgtttttg attatacata taaatttaca
    38521 cttaaaaaag acgagagagc tagcgtggag attaaagagc ttggttatga taatggggtt
    38581 caaaattttg atttttattg gactttgttt gataatacca atatagtcgt tcattctaaa
    38641 tttcgtaaat atccgcgtca atttgtgatg agtttaagaa gaaatttgga ctgggtaacc
    38701 caaactttaa ttcctgatta taaaaatcca catattgata gagcaaggct tattttagaa
    38761 tttagcgaat acaaaaaagg tgaggcaatt tttactgtgt atatagaaga taaggattct
    38821 agacttgaag tgaaatttct tgatccaaga aaaatgcaat taacaaatcc acctcaaaat
    38881 aatcaagtag tgcctatgat agattttaat gagcctcaag tagaaccatt gatacaacga
    38941 gaaaatacca caaactaaat ttgaaggata tagggtgcag ccaatagatg atttgataaa
    39001 acaatatttg caagagcttg attatgaacc tattttaact atgcttgcta ataccaaatc
    39061 aggcaaaaaa ttgcgttcaa agctactttt agcaatcgca ggagaaaatg caaattctta
    39121 taaaatttgt gccgcaatag aacttataca tttagcaagt ttgttgcatg atgatatcat
    39181 agatgaaagc aaattaagac gtggtgcaaa gtctgttaat gccgaatttg gtacaaaaaa
    39241 cgcccttatg cttggagata ttttatattc aaaagctttt tatgaattga gccaactaga
    39301 tgcttgtttt gcaagtatta tttcagatgc ggttgttaag cttgctgtag gcgagcttat
    39361 ggatgttgag cttagcaaaa gttttaatgc ggataaagat aaatatctaa agatgattta
    39421 taataaaacc gcagttttaa tcgaagcaag tgcaaggtgt ggggctattt tggcaaattt
    39481 agatgaaaaa gcttttggag aatatggcaa aaatttaggt cttgcatttc aaatgattga
    39541 tgatatttta gacattaagg gcgatgaaaa aacccttgga aaacctgcta tgaatgattt
    39601 taaagagggt aaaaccactt tgccttatat ttatctttat gaaaatttaa ataatgagga
    39661 tagggctcaa ttaaagaatt tatttcaaaa agatttaaac aatgatgaaa aaatttggat
    39721 acaaaccaaa tttgaagaaa caaaagcttt aaataaagct atattggagg ctaaagaata
    39781 tgcccaccaa gcagcactag ctataaaaga tttttccaat gaaaaacttc aagatataat
    39841 tcaagctatg atagataggg atttttaatg tattattgca tatcttttac tcataaaaat
    39901 acagatcttt ctttaaggga gagattgagt ttttcagatg aagcaaaaaa aaacgagttt
    39961 ttgagattgc taagcattca tgaaaatatt gaagaatgtt tggttataag cacttgtaat
    40021 cgtgtagaaa tagtagctta tgtaaaagaa gcttgtgcag aatatattat taaatcctta
    40081 gctttattat gcaatgtaga taaagaaagc ttagttcaaa aagctgatat ttttgaagat
    40141 agcggagcta ttcatcatct tttttcggtt gcaagctcac ttgatagttt ggttgttgga
    40201 gaaacacaaa tcgcagggca attaaaagat gcttttgctt ttgctttaaa aaataatttt
    40261 tgcgcggtac atctttcaag ggcaattcac agtgcattta aatgcgcagc taaggttcgt
    40321 aatgaaaccc aaatttcaaa aaatcctatt tcagtcgcta gtgtagcagt agctaaggct
    40381 aaagaacttt tgcctttaga tggaaaaagt gctatagtta taggtgcggg tgagatggga
    40441 gagcttgcag ccaagcattt aatcactgct ggagctagag ttatagtgtt aaacagggat
    40501 atggaaaagg ctcgtatcct ttgtgagaga ttgggtgttt taagcgagtg cgatagctta
    40561 aataatttaa aaaaatatct tgatgagtat gaactttttt tctcagctac caatgcccca
    40621 aatgctatta ttacaaattc tttaatcgat gaggtctctc ataagagata tttttttgat
    40681 attgctgtgc cacgagatat tgatattagt gaaaatgaaa aaatatcagt ttttgcggtc
    40741 gatgatcttg aagttgttgt gcgaaaaaat ttagccttaa gagaacaaga agcgcgtatg
    40801 gcgtatggta tcatcgggcg tgagacagca gaatttttta gatatttaaa tgatttagct
    40861 ttaactccta ttataaaagc gattcgcttg caagcaaaag aatgtgccaa caaacagctt
    40921 caaatcgctt tagataaagg atatttaaaa cattctgatg aagaagaggc aagaaaatta
    40981 atccatcaag tttttaaagc tttcttgcat actccaacta tgaatttgaa acatttgcaa
    41041 ggtaaaatgc aaagtgatac agtgattaat gctatgcgtt atatttttga tttggaaaat
    41101 aatcttgaag gtttaaatca atacacatgc gaatttaata tggagaataa tgatgaaatt
    41161 tagtaaatta tatgcaccaa gtcttaaaga ggctccaaaa gatgcgactt taccgagcca
    41221 tattttttta acacgcgctg gctttgttga gcaaattggt agtgggcttt ataatttttt
    41281 acctttggga aaaagagttt tagacaagat taaaaatata gttaaagaag aaatggataa
    41341 ggctggagca caagaagtaa atcttagttt tatcactcct gcaagtttgt ggcaagaaag
    41401 tgggcgttat aatgtttttg gaaaagaact tttgcgtttt aaagacagaa aagaaaatga
    41461 atttgtttta ggtccaacac atgaagaagc tatgctttct ttggtaaaaa acaaaatcac
    41521 aagctataaa caacttcctt tgcatttata tcaaattgga cttaaatttc gtgatgaagc
    41581 aaggcctaga tttgggcttt taagatgtcg tgaatttcta atgaaagatg gatatagttt
    41641 tcatgctaat gaagaagatt tagggcgtga gtttgagctt atgtataaaa cttattctca
    41701 aattttacaa agaatggggc ttgattttag agcagttgaa gctgatagtg gggctattgg
    41761 tggaagtggt tctaaggaat ttatggtttt ggcaaaaaat ggtgaggatg atattttaat
    41821 ttgtgaaaat tgtgattatg ctgcaaatgt tgaagctgca gttagagcca ataaaacttg
    41881 tgatgaagag cgtcctgaag caaattatgc aagtaaattt cacactccaa atattaaaac
    41941 tatagattct ttagcacaat tttttaaaat taatgctttt tatacgatta aagcagtggt
    42001 aaaaaaagct atttatgaaa atgaaagtaa attagttgtg ttttttataa gaggaagtga
    42061 tgatttgcaa gaggttaagg ctcaaaacgc ttgcaatgct cttgagcttg tggatgcgag
    42121 cgaagaagaa ttagaaaaag cgggattggt tgcaggtttt ataggctttg tgggtttgaa
    42181 aaatgttgat ttttatttgg ataaagagct tgaaggcgaa aaacaaatga taatgggagc
    42241 aaatgaaaaa gattatcatt taataggcat tgatgtagtt aatttaaaca aagatcgctt
    42301 taaggattta gcagaggtta aagaaaatga ttgctgtgct aaatgtggag caaaattaaa
    42361 attaagcaag ggtatagaag taggacatat ttttaaatta gggcaaaaat attctaaggc
    42421 tatgaatgca aatttcttag atgaaaatgg caaaagcaag cctttttaca tgggatgtta
    42481 tggtataggg gtttcgcgtt tacttgcagt agcaattgag gcaaatcatg atgaaaaggg
    42541 ttgtatttgg aataaaacct tagctccttt tacgcttgaa attataattt caaatatcaa
    42601 agatgagaag tctttggaat ttgctaccaa gctttatgag gatttaagca atgcaggtat
    42661 tgaagtttta cttgatgata gaaatgagcg ttttggtgtt aagatgaatg attttgagct
    42721 tatgggcttt ccttatgctt tagttgtagg caagggctta gaaaaagatg agttagaatt
    42781 tatagataga aaaacactag agaaaaaaat catatcaagt aaagaagtat ttgattttat
    42841 taaaaagagt gtagaatgaa ttacaagcta agccttagtc cgcttttttt actagaactt
    42901 gttgcaagta ttttatttat tgtatttttt ggtttgggaa attttttaat ttttatttta
    42961 gctagtatga tttttggagt aattttgctc ggaatttttt ggaaaaatat gcttgaattt
    43021 cgtataagcg gttttaaaga tatgttgact caatttgctt ttgtaatggc ggcttttttg
    43081 tttatctttc caggaatagt aacgagtatt tttggatttt ttgttttgtg ttttggtttg
    43141 atttttaatt ttgctaagcc tagatataaa agaaactaca gacaaaataa cacttctgat
    43201 gaagaaatta tcgatgttga aattatagag gagagaaaat gaaagagctt gttatagcta
    43261 caagaaagag tcaattagct ctttggcaaa gcgaatttat agcagatttt ttaaataaaa
    43321 ctcatggcat agcagttcgc ttagaaggct ttaaaaccaa aggagatgtt ttgttagata
    43381 gcccactagc aaaaataggt ggtaaaggac tttttactaa agaactagaa gaaagtatgc
    43441 taagaaatga agcgcattta gctgtgcata gtttaaaaga tgtgccaagt ttctttccgc
    43501 aaggcttggt tttggctgca gttagcaaaa gagaacaaag taatgatgcg atgttgagtc
    43561 aaaattataa agattttctt tctttgccaa aaggcgcaaa gataggcact acaagcctta
    43621 gacgcaaaat gcaactttta ttattaagac ctgatttgga aatcatttct ttgcgtggca
    43681 atgtaaattc tcgtatagaa aaattaaaaa atggggattt tgatgcgatt atcttagcta
    43741 tggcaggtat taagcgtttg gatttagata aacaagtaaa ttttgtttat acatttagca
    43801 aagatgagct aatcccagcg gcatcccaag gagctttagg catagaaagt atagatgatg
    43861 aaaaattttt aaaattttta aaatgtttaa atgatgacaa tgctttgata gaaactacca
    43921 tagaaagaga atttatctct actttagaag gaggatgtca agtgcctata ggtattaacg
    43981 cagaactctt aggagatgaa atttgtgtgc gtgctatact tggattgcct gatggtagtg
    44041 aaattttaaa agaaaaaaga atgatcaaaa aaagtgattt taaaggcttt ggagagagtt
    44101 tggctaagga gtttattgct aaaggcgcta aagaactttt aaaaaaagct gagagtatga
    44161 tatgaaagaa tttattcaaa ttttaaaaga aaatgatctt ttaagggtaa ttgaagaacc
    44221 tgtagatgta gatcttgaaa tcgctcattt agcctatata gaagctaaaa aaggagaaaa
    44281 agggaaggct ttattattta aaaatcctat agataaaaaa ttaaataaac aatataaatt
    44341 tcctgttttg atgaatactt tttgcaatga aaaggcttta aatttagctt ttggacgtga
    44401 ttatgaagag gtggctgaag aaatttcaaa actcaccaag cttcatattc ctactagttt
    44461 taaagcaaaa atagattttt ttatgaattt attaagtctt aaaaatgtcc cacctaaaag
    44521 attaaaagca gataaagctt tgtatgatta tgagctttta aattctcttg aagaacttcc
    44581 tatacttaag acttgggaag aagatgcggg tagatttatt actatggggc aagtttatac
    44641 acaaaatttg gataaaactc aaaataatct tggcatgtat cgtttacaag ttagcgataa
    44701 aaatgagctt ttaatgcatt ggcaaattca taaagatggg gcaaattttt atcatgagta
    44761 taaaaatgct ggctttaaaa aaatgcctgt aagtatagcc ataggtggag atccgcttta
    44821 tatttggtgt tctcaagcac ctttacctaa gggaattttt gaacttttac tttatggttt
    44881 tattaaaaaa actcctgcaa aaattactcc ttgtgaaaat ggtatttttg tgccttatga
    44941 tagtgatgta gttattgaag gttatgtgga tttagaagag tttaaagtcg aaggaccttt
    45001 tggcgatcat acgggttttt atactcctgc tgaacttttt cctgtgatga aagtagaaaa
    45061 aatttatgct aaaaaagatg cgatctatca agcaactgtt gtgggaaagc ctcctttaga
    45121 agataagatc atggggcttg gtactgaaag aatattttta cctcttttac aaacttcagt
    45181 acctgattta attgattata atatgcctga aaatggggtc tttcataatc ttatcttagc
    45241 aaaaatcgat gcaaaatatc ccgctcatgc gcaacaaatt atgcatgcat tttggggagt
    45301 agggcaaatg agttttgtta agcatgcaat ttttgtggat aaaaatgcac cttctttgaa
    45361 agattatgat gctttaattc cttatatgtt agatcgtttt aatacaaaga aaattttaat
    45421 ttcagaagga atttgtgatc aattagatca tgcttcacct aattcttgtt ttgggggtaa
    45481 agcaggactt gatgcttgcg aagaaataca agttgaagag cttgaaattt tagaagatga
    45541 aaaattacta gaacttttta aaactaaggt agaactttta aatttaaagc aattttataa
    45601 agaaagtaaa agtcctatag tttgtatttt gcttgataaa aaagaaaaaa tcgaacaaag
    45661 ttttgacaaa cttttagaat ttaaaaaaca ttttaggatt ttagtgtttt tagatgctga
    45721 aaataagctt gaaaattctt atatgcttgt ttggcgtgtg gtaaataata tagatgctaa
    45781 aagagatatt tttatcaaag aagaaagact tggagtagat gcaagtgcta aaggtgaagc
    45841 tgagggttat ttaagagctt ggcctaagca aacagattgc actaaaagcg tgatagaaga
    45901 tttgatcttg cgtaatattt tagaaaataa tccagatctt tttaataaat ttgaaatttt
    45961 ttaagataat tgagatttat tttaaaattt tggcacagtt tttgcttatt atttttttat
    46021 tattgaaaaa taaaattttc tttataggtg ttcataaatt tataaatttg tcgatataag
    46081 cttttaacta gcaataggaa attttaaaaa ggattttaaa atggaaatat cgaaggcaaa
    46141 tgggcaaatg gatacagctt tggcaaacat tagccaaaga acaagtgaga cgcaggctag
    46201 ttcaaacatt caaaccgata gaagtcaaag tcaaggaggc gatgatggac aacaacaagg
    46261 tgtgagtgaa aagttagctg atattacaaa aaagttaaat gagcaaatgg attctctaga
    46321 taccaatgtt cgttttggtt atagtgataa aatcggttct atgtatatta gcgtgactga
    46381 aaaaagcact ggaagggaaa tccgtcaaat tcctagtgaa gaagctatga gattagccga
    46441 gtattttagg gatgtgatag gaatgatatt tgataaggag agttaaaaat ggcatttggt
    46501 agtctatcta gtttaggatt tggttctggg gttttaactc aagatactat agataaatta
    46561 aaagaagcag agcaaaaagc tcgtattgat ccttatacta aaaaaattga agaaaataca
    46621 accaaacaaa aagatttaac agaaatcaaa actaaattac taagttttca gacggctgtt
    46681 tcatcattag ccgatgctac ggtttttgcg aaaaggaaag ttgtaggaag tattagcgat
    46741 aatcctccag caagtcttac agttaattcg ggtgttgctt tacaaagcat gaatatcaat
    46801 gttactcaac ttgcacaaaa agatgtgtat caaagtaaag gattagcaaa tgacggtggt
    46861 tttgttaatg cacaattaaa tggaactgcc gatcttactt ttttttcaaa tggcaaagaa
    46921 tatactgtta cggtagataa aaacacaacc tatagagatt tagctgataa aattaatgaa
    46981 gctagtggag gagagattgt tgctaagatt gtaaacacag gagagaaagg cactccttac
    47041 cgcttaactt taaccagtaa agaaacaggc gaagacagtg cgataagttt ctatgcggga
    47101 aaaaaagatt cgaatggtaa gtatacaagt gattcagagg cagaaaaaat attttcaaat
    47161 cttggatggg aattagataa aacgactcag actattgatc cagctaagga taaaaaaggt
    47221 tatggtatta aggatgcttc tttgcatatc caaactgcgc aaaatgcaga atttacactt
    47281 gatggtatta agatgtttag atcaagtaac actgttaccg atcttggtgt aggaatgact
    47341 ttaactttaa ataaaacagg tgaaattaat tttgatgtac agcaagattt tgaaggtgtg
    47401 acaaaagcca tgcaagattt ggtggatgct tataatgatt tagtaaccaa tcttaatgct
    47461 gcaactgact ataatagtga aactggaaca aaaggaactt tacaaggcat cagtgaagta
    47521 aattcaatac gctcaagcat tcttgctgat ttgtttgatt ctcaagttgt tgatggaact
    47581 actgaagatg caaatggtaa taaagtaaac actaaggtta tgctttctat gcaggatttt
    47641 ggcttaagtt taaatgatgc aggcactttg agttttgatt cttctaaatt tgaacaaaaa
    47701 gttaaagaag atccagactc tactgaaagt tttttttcaa atattactaa atacgaagac
    47761 attaatcaca caggagaggt aattaagaca ggaagtttaa gtaaatatct taattccaat
    47821 ggtttagaat ttaaaccagg agattttact atagttttta ataatcaaac atatgattta
    47881 tctaaaaatt ctgatggtac taattttaaa ttaacaggga aaacagagga agaattgctt
    47941 caaaatttag ctaatcatat aaacagtaaa ggtattgaag gcttaaaagt taaggttgaa
    48001 tcctataatc aaaacaatgt tacagggttt aggttgaatt ttagtggaga tggtagttcg
    48061 gatttttcaa tcaaaggaaa tgctagcatt ctcaaggaat taggtttgtc tgatgtaaat
    48121 ataacctcta agcctataga aggtaaaggt attttttcaa aattaaaagc cacgttgcaa
    48181 gagatgactg gaaaagatgg ttcaattaca aaatatgatg agagtttgac aaatgatatt
    48241 aaatcattaa atacctctaa agactcaact caggctatga ttgatacaag atacgataca
    48301 atggcgaatc aatggttgca atatgagagt attttaaata aactcaatca acagctaaat
    48361 actgtgacta atatgattaa tgcggcaaac aattctaata attaaggata aaaaagatgc
    48421 aaaataattt agcctataat gcttattctc aaaatcaagt ggggatagag tctccgcaaa
    48481 aacttattga aatgctttat gagggaattt tgcgtttttg tgcaagagct aaagtagcca
    48541 taagaaatga agatatagaa caaagagtgt attttgtaaa aagaactacg gctattttta
    48601 tagagcttat taatacttta aactatgaaa aaggcggaga agtggctcat tatcttagtg
    48661 gtctttacac aagagaaatt cagcttttat ctttggcaaa tttagaaaat aacgaagata
    48721 gaatcaatga agttataaat gtaaccaaag gtttgctaga agcttggaga gaagtgcata
    48781 acaatgaaac agtggctcag tgattttaaa cttgcattaa tccaagaaga tgtcaataaa
    48841 cttgaaaatt tacttgatga acttgatatg aaagctttta ttaaaaattt agccaaagaa
    48901 tcgccttcag aagatttttt aaaagaaaat gcaaatgatg tattttatca agttcaagct
    48961 cttttgcaag aagctgttat actgattgaa caaaagaaaa aaacaaaagc tgttgaaatt
    49021 caaaaatttc aaaaagcgtt gacatatttt aaatcttaaa aaagcatagc gataagccga
    49081 gttctgtcta gaatgctcat ttatctagtt ttgttttcgc aaacaaaatc aagcgaaggg
    49141 ttaaaacaaa gaccttaacc atcccttctt gctgcacatt gggtttacat agccgaaatt
    49201 gttgccaaaa tcgctggtaa gcttttacct caccgtttca ccttttccac ttttgtggta
    49261 gttttctttc tgttgcactg tcccttaggt cgccctagcc atctgttaga tggaatgttt
    49321 gtcttttgca gctcggactt tcctcttctt tttttaaaga agcgagcatt tactatgctt
    49381 taaagctaaa ttctaacaaa aaaatgctta ttttattatc aattatattg tgatatcaaa
    49441 taatttttgt tagaattata atttattttt aatataaaag gaaaattatg gcatcttatt
    49501 caatgggtga tttaaaaaaa gggcttaaaa tcgaaatcga tggaattcct tttaaaatag
    49561 ttgaatatca acatgtaaaa ccaggaaaag gtcctgcttt tgtgcgtata aaaatcaaat
    49621 cttttattga tggtaaggtt ttagaaaaaa cttttcacgc aggagataaa tgtgaagctc
    49681 caaatttgga agaaaaaact atgcagtatc tttatgatga tggagaaaat tgtcaattta
    49741 tggatacaga atcttatgag caagttgcaa tcagtgatga agatgtaggc gaagcaaaaa
    49801 aatggatgct tgatggtatg atggtggatg tactttttca caacggcaag gctattggcg
    49861 tggaagttcc gcaagttgta gaacttaaga ttgtagaaac agctccaaat tttaaaggcg
    49921 atactcaagg ttcaaacaaa aaacctgcta cacttgaaac aggtgcagtt gtgcaaattc
    49981 ctttccatgt tttagagggt gaagttatac gcgttgatac agtgcgcgga gaatatatcg
    50041 aaagagctaa taaataaaat ttttacgcgt acagattttt ttaagcgcgt ttgattttat
    50101 cgcaaaaaat aaatatcaaa ttcagcaagt ttgtataaat taagatattt atgtaagatt
    50161 ttaaaatata ttatttcagc ttttaatgca tgcaagctta aaagctgaat ttaaagaatt
    50221 atttacttgt caattttact ctaaaaatgt attttgcaat gtattcaaaa tattttctta
    50281 aataagccct atgaacaaca aaacctccta aaagtcctaa aagactgcct atgataatat
    50341 cttgtaagcg agcgtgtatt aacatatcaa cacttaagtt tccaaaagaa gccgcctcgg
    50401 ccaaataggt cacataaggt gtaagaaaaa tgacagctaa ggcatagttt ctaactacta
    50461 aaaattcaat tataaaggct aaaaacatca ttaaaaagat aaattctaaa ggagtgaatt
    50521 taattcttaa aagccaccat gcaaataaaa ttccaactgt tgttccaaga atgcgttgaa
    50581 gttgttttat ccaaactgaa tttaaattag tcccttgtaa gataaccgtt gtgctaactg
    50641 caacccaata acttcgatca agttctaaaa atgttcctaa aaacacagca aagccaacaa
    50701 aaaaagcaat aattatagaa tccacaaaga taacatcaaa acctaaattt ccatttttaa
    50761 aacgggtttg ggtggagaat ttttaaaaat ataaatgaca gatacagagt ataaaaaagc
    50821 agttatatta gcaatgatac cgcctataca gattagtccc actagaaaaa tataatcttt
    50881 tggcggaaaa ggaaaaaatg aagctagtaa acaggaaaaa acgaagaaaa aatatcctgg
    50941 cgcgcctata ttataatagc gtatcaaaat agagctagcc atagctacta agccaactac
    51001 aagcggagag aatgcaggaa aaaaatgcgt gcaaagtcct attaaaaaag acaaacacaa
    51061 accaaaagag cagcacattg taacagccat tctatgatac ataggtgtat tggttgtata
    51121 aacaaaagcc atgattccta tcatagcaat taatcctaag tccatacgat cataatatgc
    51181 agcaatacta agcgcaaatc caactgctaa ggcaaagaaa aaaggcattt gccaaactct
    51241 ttcggttgga ttaagttgta tgatttcttt acattgttgt tttaaaattt ttcttttact
    51301 cattttctta tctgtccttc tccactgatt aagtatttat aggtgcaaat atcttcaact
    51361 cccataggac ctcttgcatg aagtttgctt gtggaaattc ctacctctcc accaaagcca
    51421 aattcacccc catcactaaa acgagtcgag gcattgacat aaatacaaga tgagcgtaga
    51481 aggcgttgaa atttgcctat gtttaaagca ttgtttgaga ttatggtttc agagtgtaaa
    51541 gagctgtgtt ggttgatatg ctctatagcc tcatcacaat cttttaccga ttttatactg
    51601 atagcataat caagccattc tgtatcaaaa gtgctttcat cagcctttga aatttctaat
    51661 tttgagtttt taaaatgttc taagatattt tcatgtgcgt gaatttttac cttaaatttt
    51721 tcaaattcag ggattaaaag ctttataaaa tctttagcaa ttttttcatg gattaaaagg
    51781 gtttctagag cattacaaac gcttactctt tggcattttg cattaaggat gatttctaaa
    51841 gccatattta aatttgcact ctcatccaca aaagcatgac ataagccttt atcttgtttg
    51901 atgagtggaa tttttgtatg actagcaatt tcttgtatca tgtttgaact tccacgaggg
    51961 atgatcacat caaccaaatc atcaaaagct aaaatttgca tgatttcatt tctttcataa
    52021 aacatagcaa aacaatcttg caaattaaac tcttctaaca ctttataaac aagatcaaat
    52081 atggccgaat ttgtaaattt tgcctcactg cctcctttaa gtacgcaagc attggagctt
    52141 tttatcatta aagcgatgat ttcagcactt aggcttggtc ttgcttcata aatcacactg
    52201 attaatccta taggaatgct gattttttct atctttaagc ccacataatt aacccagcct
    52261 ttagaaattt tacctatagg atcttctaaa taagcaatct tttccaaagc atcacaaaga
    52321 gaaaaaatgc gtttttcatc tagtaaaagt ctatctcgca ttgctccgct tttggtaaaa
    52381 tttgtcatgt ctttttcatt ggcttctaat atgattttaa aattctctct taaagcacaa
    52441 gctaatttca atataatatt ttctttatcc ttgggagtta aattgagcag tttttgagaa
    52501 tttttcttaa tattttcaag taaatttcgc atttttaatc ctttatttac aaaaaacttg
    52561 ataaattata caaaaaaatt tagaattgaa aggtaaattt gaatgaaaaa agtagattta
    52621 attgtagtag gtgcagggcc gacaggaatt ggttgtgcgg ttgaagctaa gcttaaaaat
    52681 aaagaagttt tggtattaga aaaatcaaac aatatttgtc aaactttgat gcagttttat
    52741 aaagatggca aaagggttga tatggcttat aagggttgtg aaggcacaaa tcacggacat
    52801 gttccttttc aagatggaac caaagaaagc actatagaga cttttcaaaa tgctttaaat
    52861 gagcataaaa tagaagttga gtttggctct gaggtagaga gtgtgaaaaa tgaaaatgga
    52921 gtatttttag taagtacagg caagggtgtt tatgagtgta aaaatatcat cgtagctata
    52981 ggtagaatgg gtaagcctaa taagcctgat tataaacttc ctataacttt aacaaagatt
    53041 attaatttca atgctaattc tgttttaggt gatgaaaaaa tccttgttgt aggaggcgga
    53101 aattcagctg cagagtacgc agtagattta gctaattcta ataaagtaag cctttgttat
    53161 cgcaagaaag aatttacaag attaaacgat atcaatctta aagatattca cgaagctgga
    53221 aattcaggca aagtagaatt aaaactcggt atagatatag aagaacttga ggatgataat
    53281 ggtaaagcta aggtgaaatt taacgatggc agcaacgaga cttatgatag aatcatttat
    53341 gctatcggtg gttctactcc tcttgatttt ttacaaaaat gcggaatcaa tgtcgatgat
    53401 aaaggagttc ctttaatgga tgaaaataaa caaagcaatg taaaaggtat tttcgtagca
    53461 ggggatatcg caactaaaaa tggcgcaagc atagtaacag gcttaaatga cgctgtaaag
    53521 atacttgccg taatttaatc aaatttggcc cttgggctga atttgactta ttaaactttc
    53581 aatattataa tttctttatt atattttaat ttttaaatat tatcatgcaa acacaagata
    53641 aaaacaataa aaaaatcata ccgatagaaa cctatcgctt agctttctac atactaggac
    53701 ttcaaacact ctattagctc cttttaagat atttgtattg ttaaatattt taaaggattt
    53761 tttatgtcaa atatttttag caccttaagc ccttttaggc tttttgttaa atgtgctgtg
    53821 cctaatgtaa taagcatggc atttatttct ttttattata ttgttgatgg aatttttgtt
    53881 ggaaaatatc taggaaatga cgctttagca gctttggcct tgattattcc ttttattatg
    53941 atatcttttg ctttggctga tatgatagcc attggttcag ctgtgcaaat ttctatgcat
    54001 ttaggacttg ggaagaaaca tttagctaga aaaatcttta gttctagtat gttaattatc
    54061 ttccttattt catgcttggt aggtatttta gaatatcttt taagtcctgt tttgatcgat
    54121 tttttagatg taaatgaaga tatcaaatca atggcaaaag agtgtatgct tgtatttgct
    54181 ttgttcgccc cctttactat gtgttctttt gctttggata attatcttag aatttgcgga
    54241 aaaacaactt atagtatgac aatgaatgtg attatagcat tgagtaatat agtgcttgat
    54301 tatattttca tcgttgtgtt gggttggggc ttgttttcag cagctcttgc gacttgcttg
    54361 gggcttatgc taggcggtat ttttggaatt tttccttttt tatttcagaa tttagagctt
    54421 aaattttcaa gtttgtatat gaatatgaag atttttaaaa acatagttta taatggaagc
    54481 agtgaatttt ttggcaatat ctcgggttct ttatatggta tatttgctaa tttagttttg
    54541 ttaaaaattt caggcactca agcagttgcc gctttttcta tcgtttcgta tattgataat
    54601 tttatcatta tgcttattat cgctatgggt gatgcgatgc aacctgcatt aagttataat
    54661 tatgctaaaa aagatttttc aaggattaaa gatattttaa aggtaatgtt ttttgcaggt
    54721 gcgattttat ctttattgtc tgttgcaatg atatttgttt tgggtaagga tttagtagga
    54781 ttatttactc aagaaaatga tcaagaattt atcatttttg cttatatggc tttgatgttg
    54841 ttttctttta attatctttt tgcgtggttt aatgttttaa gtggttcttt tttaacagcg
    54901 agcaataaag cgagtttttc tttgatttta agcttgagtc aaaatctttt tattccttta
    54961 tgttttcttt tgattttatc ttctatcatg ggcttaaaag gagtgtggct tagtccattt
    55021 tttgctgaat tttgtgtttt ggttttagct tgtatttttg ttagaaaagt ctttaagaaa
    55081 ctatcgtttt tataaggata gtttctttgg attgatttta gaatttatat cctacacctg
    55141 taagtaagat gtgatatgtt tcatcgtaaa aatctatatc gctatttctt ttttctaagc
    55201 cataatttgt aaaaccataa agtgagttat agcctaagaa ttgatttttt acgagcttga
    55261 gattgaattt tgtaatgcta ccatcttgtt tttggttaaa aataggatcg gtgccatctg
    55321 ctttgtattg atttaagctt aggcttggag ttaggatata atttcttgca aaaaccagat
    55381 gtgttcctat tttaaagcca tatcttgagt agctttgagc ctttccatcg gcatcattat
    55441 aatcatagtt taagcctaaa tttaataaag aataattata gcttaattct aactcatgat
    55501 aatttccctc tcgtttaaga gaagcaaatt ctatactttc tttatctaat ttattttttg
    55561 caaaaacata agaagcgttg aattttccaa aatcactttc ataaagttgt gaaattctaa
    55621 agccgtattt acttacatcg gtttcttcac gattgcctat aaaataagga ttagcataag
    55681 ctttttctct taaagatgaa atgaaagaaa aagaagtgct aaagcgttct aaataagctc
    55741 tttcataacc caaagcaata ccgcttaaat cccttccgtt gtagttttta agaaatactc
    55801 tatcattatc gattaaattg ccatagtaaa gctcaagacc tataaaaggg atagcagctg
    55861 tatcagaatt atcggcattg tatccgctta gatagtcact atttgctaga ggtgagatat
    55921 tgctcttaac atctcttaca cctactccta ggcttaaatt tccgctaaga ccactttgaa
    55981 attctatgga tgaagcttga cttacaaata aagaggccaa agcaaaagaa aataaggttt
    56041 ttttcaagat aaactccttg atagttttta taattagaaa ttttattgta actaatatta
    56101 ctttaatttt ttataaaaag cttatgtgaa tttttagatt cttttagata aaatctttca
    56161 ataaatttta ctcaaaaaag gaaaataggt gcagcaagat cattttgatt tggatttaga
    56221 acgtgcaatc ttaagtagtt gtattatgag tgaggatgct tattctagta tagcaggaga
    56281 tatagaacct aaggatttta gtcttaaagc tcatcaggat gtttttaaag ctattattgc
    56341 ttgcgtgaat gctggagagc ctatatcgat tagcttttta aaaaagcata aaaaaataga
    56401 cgagcaaatt ttaaccgaga ttatcgcaac tccttcgata atagatcttc ccgcttatgt
    56461 caatgaactt cgcgaaaagt cgattaaaag acagctttta agctttgccc atcttttgcc
    56521 aacaaggatc aatgataatc gcgcagtcag tgaaatttct gatgaaatcg gcaaggaaat
    56581 ttttaacatc accaatcgtg taaacaccaa cgatatcaaa gatatagaaa tagtcttaag
    56641 tgagcttttg gaagaattta aaaaacaaaa aagccttgaa aacaaatccg tgataggact
    56701 tgatacagga tttgaagatc taaatactat gactaagggt tttaaaggtg gggagcttat
    56761 catcatcgca gcgcgcccag gtatgggaaa aacaactttg tgcttaaatt ttatagaaaa
    56821 ggttttaaga caggataaag gagtggtgat gttttcgctt gaaatgcctg ctgctcaaat
    56881 catgcaaaga atgctttcgg caaaaacttc cattcctttg caaaaaatct tgactgcgga
    56941 tttaaatgat aacgaatggg aacgcattgg cgatgcttgc aattattatt ctaaaaagaa
    57001 attatttatc tatgatagtg gttatgcgac tattacagat gtaagagcga ttttaaggcg
    57061 cttaaaggct caagaagaaa gtatagggct ttgcgtgatc gactatatag ggcttatgat
    57121 gagtaattct aattttaatg atagacattt gcaagtcagc gaaatttcaa gagggcttaa
    57181 gcttttagca agggagcttg atatgcctat catcgcgctt tcacagctca atcgttcttt
    57241 agaacagcgt gcaaacaagc gtcctatgat gagtgattta cgtgaaagtg gggctataga
    57301 gcaggatgcg gatacgattt tgtttgtata tcgtgatgag gtttataggg aacaagatga
    57361 aaaagagcgt gaaaataaag cgaaagccga aggcaagcct tatcaaagaa atttcattcc
    57421 taatcctatg caagaaaatg ctgaaatttt agtcggcaaa aatagaaatg gtcctgtagg
    57481 ggttgtcgag gttttatttt taaaagaaaa atcttgtttt gtggataagc cacgatttga
    57541 gagtgttgaa tttcaggagt agggattaac tctataggtc gagcttaatt tgccataaag
    57601 aaatttagaa agagaacaaa gtcaaaagtc taaactaaat caataataac taaagtccaa
    57661 aatacccata aacaagcggt tttaataaga ggcgtccaag ataaaagccc attgtgtatt
    57721 atgcttaaaa cgccttttgt actttcaacc ccaaaagcta aatttggagc aagaaaaatt
    57781 aaaaaaataa tcgctagttt atttccattt aagagcgtct ttgttgtaat tttcattttt
    57841 tccaattccg taaggaacac gattgtcggt ttgcatttca actgcccatt ttgcattaga
    57901 acaatccctt tgttgagttt cattcatttt ctccattttt ttacattctg caactctagc
    57961 tttagtctca tctaagtgtg ctttataata atcgcttgtt tttgcttcat ctccacaacc
    58021 tgctaaaaaa gccaaagcgc ctcaaccaat taacccacta aaaataaaat gtttcattgc
    58081 tcttctcctt gatttgatat agaaacaaaa tattttagca ttattttatt tctatttaag
    58141 agcgtctgag tttgatttac ttcaagtttt tttaatacaa cctgcatctt ttataaattt
    58201 atccattttt acctgttgca ttattctttg attgctaagt aatgagtaga tatgttattt
    58261 taatctataa taagtgattt tgattttttg agtggttttt gcagtctgca atttttcatc
    58321 agggttttgt ttaagttttg caatgagtgt ggctttgttt tagaaaact
//
LOCUS       DBBXOW010000003        57975 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.003, whole genome shotgun sequence.
ACCESSION   DBBXOW010000003 DBBXOW010000000
VERSION     DBBXOW010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 57975)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57975)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57975
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.003"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            30..239
                     /locus_tag="ACJE1S_000166"
     CDS             30..239
                     /locus_tag="ACJE1S_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HGG0805746.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLHIEQTIQDEIAKFK"
     gene            300..1256
                     /locus_tag="ACJE1S_000167"
     CDS             300..1256
                     /locus_tag="ACJE1S_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805747.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCLGKHHVLILNKKNIASITTLIFIGILSIILPRNT
                     TFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFAAYFQF
                     LFQEGTGIRYFEFASLVFCFYLLNYAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYTKLILKQIAKILKRFRAKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(1261..1833)
                     /locus_tag="ACJE1S_000168"
     CDS             complement(1261..1833)
                     /locus_tag="ACJE1S_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HGG0805748.1"
                     /translation="MKKILLSSLVAASLLSAGLFAKEYTLDKTHTDVGFKIKHLQISN
                     VKGNFQDYDAVIDFDPASFEFKKLEATIKVASVNTDNQTRDNHLQQNDFFKAKQFPNM
                     TFVMKKYEKIDNEKGKMTGTLTITGVSKDVVLDTEIGGTAKGKDGKEKVGFSLNGKIK
                     RSDFNFAPGTSTITLSDDINLNIEVEANEK"
     gene            complement(1908..2270)
                     /locus_tag="ACJE1S_000169"
     CDS             complement(1908..2270)
                     /locus_tag="ACJE1S_000169"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HGG0805749.1"
                     /translation="MIYENDLIYIEKEEAQVPWIKIFTKQVYKEFSDCPYELQKEIFD
                     KILRCEKAMIEFYKPEKINIASFANYVPRVHFHIMARFKEDAFFPECMWGKQQRELKD
                     LNLPSFDEFVIFLKNKMD"
     gene            2380..3060
                     /locus_tag="ACJE1S_000170"
     CDS             2380..3060
                     /locus_tag="ACJE1S_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metalloprotease CJM1_0395 family
                     protein"
                     /protein_id="HGG0805750.1"
                     /translation="MQIGLNYNYASNSSYYDKTQKNNAEQENTENTNSQNKDSKQNNE
                     QTQMINGVELTIQQVQQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFSYTRGPDNQM
                     YATAGEVPIRMQKGRTPEETIANARQVVAAAMAPADPSPQDYKVAANALKMEFEARAE
                     ATKLKAQEAQEKKEENEEKQENLDINNQDSKDNFEETQANKDFKNFIGKIYQQNSQNN
                     PINFSLVS"
     gene            complement(3079..3783)
                     /locus_tag="ACJE1S_000171"
     CDS             complement(3079..3783)
                     /locus_tag="ACJE1S_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG0805751.1"
                     /translation="MRIFFILSLFFHTLFAVNDLDNALRLYEGNKFVKAYEIFERLCE
                     KDNARACFSLAYMNENAQGVARDFDKACKFYDKSCKLGLTKACSNMALTLQDLGYVNE
                     SLLAFNKACNLGESSSCNHMGLVYEDEKDGQMATHFYKRSCDLKDARACYKLGFLYER
                     GELVRQNLKSALAFYSKSCTLGFTEACYLIGRYYELEKKDLKKAKRYLGMACDKKHQE
                     ACAAYRKLNSQDIEIY"
     gene            complement(3780..5612)
                     /locus_tag="ACJE1S_000172"
     CDS             complement(3780..5612)
                     /locus_tag="ACJE1S_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HGG0805752.1"
                     /translation="MQINILNHFIKAYEDAYNIDFDKSFEGQIKMLCKKLNEPFMHPS
                     YNLIQELEELSFSLDKNINIAIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLR
                     YADEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTP
                     GLNANEDDTLTTLKELQNIHAAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLSAQELENVLNYAKTVFSKYFKELIAISCKEAKDETKYEESNFNLLLDFLDNLDEK
                     ALKQKFTKRKMLHLCQVLEDENRLFVDIFDKLANQFQIYQEKLNSSFDDFIKEVQILN
                     HQILNKLKSIGERIASEIFNCIKEKEAHFYKEAKGFLKKDLYVKYDYKAPFISSDDAF
                     LAMFYNSDIMNKEFKKIKNEIYESFEKIKQKLKDFIDNLEKDILLFKAEFSNIQKDNI
                     LQSDKNFSELRAFCNASDEYFLKDFKELLFKSLLELDLFFEKLNLKAFANYANATKLS
                     LAFFSRKINESRVLYELDSSEFTLFYPKKSEIYERVLTELNAYEFEALLINKPILVKI
                     SNHFLEQNTNIIQEKNKILDLKKVELQKRKEQILEVRSVLKENL"
     gene            complement(5602..7788)
                     /locus_tag="ACJE1S_000173"
     CDS             complement(5602..7788)
                     /locus_tag="ACJE1S_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HGG0805753.1"
                     /translation="MKELLQKLWQNELQLLDFNASFKDKNILDVSELAIILSVNKDNY
                     ERYFLLKEFSNICKKIDLRVDIFSIQKAQICVLNMFREGFIPKQDLLKALRILQKISN
                     NAEILEYIQNIQVQSIDKKALFQSGFNELNHINMELSQLSFDENSKIRLQKTLEKFQK
                     LEFNIAITGVMNSGKSSLLNALLKEDFLGVSNIPETANLTLLSYGNTQEAVIYFWDTQ
                     EWDNILKSSKFSKELKEFIDELALKIDIKEYVQDKALTQKINLKELKEFSSAKNQISA
                     LIKKIEIKSNLEFLKNNISIVDTPGLDDIVVQREILTNEYLKESDFLIHLMNASQALT
                     QKDAEFLIHCLLNSRLSKFLIVLTKADLLSQKDLDEVINYTKESLKARLENFDTHLIE
                     KIDFLCVSAKMASDFYKGLSSEESFKKSGMKEFEEYLFNELYSGEKSKIILQAYKKEL
                     LLELRNILNEYEMQNKLIKEDGQGLSEENDKLLLEFKAKEEALKEAKEEISNSILNLE
                     NFENGVDNLVLLLAKKLKERLIDEIKYLKDKAQKININRILNMIDITVKDGINDILRE
                     VKFENIKKIEELKTSLALKYDFLKDDFDNGFEGFKDEISKKIENIFSDEKFALLRLQI
                     EQIISTKVDLFELETKLTEVIFSTFESFNIGAILKDLDINGAFFAFLNERMKNYEVLQ
                     KEKLASIEHLINNLKNQNADILFSYEGNLEKIAKLQQLEVELMNAN"
     gene            complement(7816..8541)
                     /locus_tag="ACJE1S_000174"
     CDS             complement(7816..8541)
                     /locus_tag="ACJE1S_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HGG0805754.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYSDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKIEERIEPEVAEETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRTVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKNLPLQSKIAYMRRQLVAQRNK"
     gene            complement(8534..10525)
                     /locus_tag="ACJE1S_000175"
     CDS             complement(8534..10525)
                     /locus_tag="ACJE1S_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HGG0805755.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLGNGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAS
                     WGVPWTRVTKGPRTVVINAQKTVIEEREEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRVIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLDG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIIGDYFADYCKNNGEVIDTNIVKDFLT
                     KEYQYLKSLVDKEGKYSVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKESQN
                     VKVHCKELDCANPELEEAYRVPRMLKVALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTLTYWVEGESLPRVEYDELDIMKMEMPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKNRHEIQHALMPYELQPKYKALNQRIGVDYE"
     gene            complement(10509..11294)
                     /locus_tag="ACJE1S_000176"
     CDS             complement(10509..11294)
                     /locus_tag="ACJE1S_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HGG0805756.1"
                     /translation="MSELIEGYLGKSIDGKKSKMPAKLDFIQSASGLFLGLFMWVHMV
                     FVSTILVSKDFFNSVVHFLELKFIYNDPMMSYITSFLAACVLVVFFVHALLAMRKFPI
                     NFRQYQILRTHAKKMNHGDTSLWLVQAFTGFVMFFLGSAHLIFVITNGDKISADMSGD
                     RVINHFMWLFYIALLICVELHGSIGLYRLCVKWGWFEAKDVKDIRKSRKKLKMAKWII
                     SIFFLVLGVLSLAAFAKIGFENYQSQTTAMVKTYNGANYEYSI"
     gene            complement(11362..12177)
                     /gene="lgt"
                     /locus_tag="ACJE1S_000177"
     CDS             complement(11362..12177)
                     /gene="lgt"
                     /locus_tag="ACJE1S_000177"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HGG0805757.1"
                     /translation="MEFWQNIYSNFDVVAFSVLGFKVHWYGIMYVLALLLALLLAKFF
                     VRKFKLDIDEKRLDSYFIWVEIGVILGARLGYILIYDAHTMYYITHPWQIFNPYANGE
                     FVGIRGMSYHGAIIGFLIATFLFCKKYKENPWKFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITDVSWGIYVEGVLRHPSQLYEAFLEGVVVFIVIYLVKMKQKFQGELILVYACV
                     YSLARFVCEFYREPDFGLGFIFWGMSMGQILSLLMFVAALLFYICIKFKKVNI"
     gene            12268..13173
                     /locus_tag="ACJE1S_000178"
     CDS             12268..13173
                     /locus_tag="ACJE1S_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805758.1"
                     /translation="MKKYFLFIIALFLAACSGASNNFVHVSMPNFKPQTPTKVEPIDS
                     GVSIMLEPINIEQNNNYSDYFENSVLKIRIDKEVALLKENLEEQFKTIAQLKGYKIVT
                     SNPDYTLKSLINILIEEKNIQKSNNFMSGESVKSNLGIKFQGKIDFIDQHNPQNSTNL
                     TSHTKLDSLVDLNYPIKTKDGINMFKTTISTVPTQLNKGLEKPAFEIDKSFLHFYKNT
                     LNTLYNNLPKATDIGKTVPNSNTDSSGFNHFDTNTIFEENLPQEQNLDNSSQDISFQE
                     QTSSNSNIQYENNTNKNQDGVIIFE"
     gene            complement(13246..14037)
                     /locus_tag="ACJE1S_000179"
     CDS             complement(13246..14037)
                     /locus_tag="ACJE1S_000179"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HGG0805759.1"
                     /translation="MKFLAVIGDPISHSKSPRIHNNAIQVLKLDGIYTRYHLQDYHQL
                     RQDFFKLKLQGANITLPFKEAALEMADVKDELASNIGSANTLCLKDGKIYAYNTDALG
                     FLEAIKEFESINKALILGAGGTALALAFALKQKGVEVCVANRSEKRFKDFTLYKTSLY
                     NALDDFDFDLVVNSTSAGLKDDDLPCDKILLDKILSRAKFAFDVIYGKETSFLKLCKE
                     HNLKVKDGFDMLLWQAVFAFELFFDVKDKREKIKNAMQEALKLEF"
     gene            complement(14034..14861)
                     /locus_tag="ACJE1S_000180"
     CDS             complement(14034..14861)
                     /locus_tag="ACJE1S_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HGG0805760.1"
                     /translation="MENNKNEFDDIILEKSNKSEKMKKILLRVIALIILFLVIMIVMK
                     LINSGEENTENQSILPSEPLNITQDNNTDSFESMPITENTSAEDQFEALRRQIQGEQN
                     DNSLAPAPNANDNINLTMPDQEVPAEPNTTNSEKVAPLNTTPPKQEVKQESKPKEEAK
                     QTVVKKEPAKQTPKQEPKANANDLFKNVDAKPVHPNGLASGIYVQIFSVSNLDQKSRE
                     LAAVKQKGYEYKLYKTTVGGKEITKVLIGPFEKANVAAELAKIRKEVAKDAFSFTLK"
     gene            complement(14874..15419)
                     /locus_tag="ACJE1S_000181"
     CDS             complement(14874..15419)
                     /locus_tag="ACJE1S_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HGG0805761.1"
                     /translation="MISPMDLSLIKIISDHYYIRRDKIMKKITHRGRLFFDKFERIDA
                     PLNLNIMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDIPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(15416..16660)
                     /locus_tag="ACJE1S_000182"
     CDS             complement(15416..16660)
                     /locus_tag="ACJE1S_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HGG0805762.1"
                     /translation="MSLEQFDKEIFDLTNQELVRQCEGLEMIASENFTLPEVMEVMGS
                     VLTNKYAEGYPGKRYYGGCEFVDEIENLAIERCKKLFNCSFANVQPNSGSQANQGVYA
                     ALLNPGDKILGMDLSHGGHLTHGAKVSSSGKMYESFFYGVELDGRINYEKVREIAHIV
                     KPKLIVCGASAYARIIDFSKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSEE
                     WKIYAKQVRSNAQALAKVLMDRKYKLVSDGTDNHLVLMSFLEREFSGKDADLALGNAG
                     ITANKNTVPGETRSPFVTSGLRLGTPALTARGFKENEIQIVANYIADILDDIQNTHLQ
                     KEIKEKLKTLASNFIIYEKAMF"
     gene            complement(16657..18165)
                     /gene="lysS"
                     /locus_tag="ACJE1S_000183"
     CDS             complement(16657..18165)
                     /gene="lysS"
                     /locus_tag="ACJE1S_000183"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HGG0805763.1"
                     /translation="MFDNILEQQRIQKANELKNAGVNPYPHFLVKELSLADFKKKFSY
                     IFDTENKRDESISSVISGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFNLF
                     KKNLEVGDIILAKGFPFVTKTGEFSLHASEITLATKSIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNAEVRKDFLTRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLEKLQLGKIIEFDGQKIDFSKPFERITYKDALKKYGALSDEII
                     ENKDKILEKLKKDGFEANDKLDLGHLQAELFDNYVESKLIDPTFITDFPISISPLSRR
                     SDKNSEIAERFELFVCGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEDKE"
     gene            complement(18165..18635)
                     /locus_tag="ACJE1S_000184"
     CDS             complement(18165..18635)
                     /locus_tag="ACJE1S_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HGG0805764.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREILLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCNNCNQKAKVKI"
     gene            complement(18639..19199)
                     /locus_tag="ACJE1S_000185"
     CDS             complement(18639..19199)
                     /locus_tag="ACJE1S_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HGG0805765.1"
                     /translation="MEFYWFDAFILGFTLLLGLKGIVSGLIKEVFGLLGIIGGVFIAS
                     KYASQAAEFIQNTFYKIENQSLANFAGFLAILIIFWIICLVLGNFISKLVKLSGLGFL
                     DRLGGFIFGGAKVFLIFAILVFCVARIDFLNDKLNQFAQNSFTLTPLKNIGSFIMNQS
                     LTTSSLGQIDQNLQDIRDDLSTTQGE"
     gene            complement(19280..19567)
                     /gene="gatC"
                     /locus_tag="ACJE1S_000186"
     CDS             complement(19280..19567)
                     /gene="gatC"
                     /locus_tag="ACJE1S_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HGG0805766.1"
                     /translation="MQIDEKLLSKLEKLSALQIEEEKRSEVICELSEIVNFVEKLNEL
                     DLSSSEVTISTIKGGAPFRSDSVNSSNVVETVLNHAPKSNDHFFIVPKIIE"
     gene            19699..20277
                     /locus_tag="ACJE1S_000187"
     CDS             19699..20277
                     /locus_tag="ACJE1S_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805767.1"
                     /translation="MGLKDNLKAVKAEINTEEQFIENFIKGERFIKKYKLYIFALIAI
                     LIIWFTISFISGKIEQYNIEESNKIYTSLLNNPNDQALLEQLKNKNANLYAIFLMKEL
                     AKDINNTEIKSQLQSLSSNSDANHLLKNIISLPLGEKSIFLKNYDKILQAYRLLGEGK
                     IEQANILLSQIKDDSALSQIAKNLKHYQGISR"
     gene            20274..21272
                     /locus_tag="ACJE1S_000188"
     CDS             20274..21272
                     /locus_tag="ACJE1S_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805768.1"
                     /translation="MRQFFLISFCLIFLCACGTKRQYFEPSQTDGKLSSNDSLKSSIV
                     DWNTISAKLKNNQVILKNDAIIEDFKLDKGYILLAYQEGEFIEADDNGNLKIYNSSHD
                     EVYSYKFDAAVLGVALHGDDLALVLANNSIVLANRSLGIKFSQNLTPAPAQDSRVANP
                     IFLDNIIIYPTLDGKITIVSKNTFEVVKDVVISAESFFNNVIHLDINDDKMIAATAKK
                     VIVVSPARTLYLDADIKDIALDSNALFILEKNGNIIKTDYNLRKITEKKFDFAIFTKV
                     SIHNDHLYAFEKTGYLIKCDLNLENIQIFELPNAVEKISFIGNGKFYYGDKILDLL"
     gene            21269..21556
                     /locus_tag="ACJE1S_000189"
     CDS             21269..21556
                     /locus_tag="ACJE1S_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HGG0805769.1"
                     /translation="MNILNEAMKVLKLNLKPFDLTNLTKKKTYLCALNDENLLLIYTG
                     KARFINKDAIFINNLANDFDLKYKYFFTKSPLCSKAKHYLEEKGFHIHAIL"
     gene            21543..22172
                     /locus_tag="ACJE1S_000190"
     CDS             21543..22172
                     /locus_tag="ACJE1S_000190"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HGG0805770.1"
                     /translation="MLFCDIGNSNASFLDDNKFFTLNIEQFLEFKSEQKIFYINVNEH
                     IKEHLKARKNFINLEPYFVFDTIYQGLGVDRIAACYTIEDGVVVDAGSAITVDIVSNS
                     IHLGGFILPGIANYRKIYAHISPRLKHEFNTQISLDAFPQKTSDALSYGVFKSIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDYAIYDKLLIFRGMKKIIQENPNLLF"
     gene            22299..23645
                     /locus_tag="ACJE1S_000191"
     CDS             22299..23645
                     /locus_tag="ACJE1S_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HGG0805771.1"
                     /translation="MTQQEFDVIVIGAGISGAALFYELARYTDIKNIALIEKYHAPAT
                     LNSKGTSNSQTIHCGDIETNYTLEKAKKVKRTADMIVKYGLLQNAQNQFMFSHQKMAL
                     AVGDSECEYMKKRHEEFGELYPYMKFFNKDKIKQIEPKVALGENGRDDRPENICAMGV
                     EAGEVFTTVDFGKMSASLVEQGQKQGKNTFVAFNQEIVHIEKKDDIFILKTNTYQEYR
                     SKAVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFSMFKDP
                     TIRNYILYNYLFELPFIDKGLFVKDAKKIVPSLKTSDIYYAKGFGGVRPQVIDKTRGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLMCEYLGAKFDEDKFASELL"
     gene            23697..25139
                     /gene="pyk"
                     /locus_tag="ACJE1S_000192"
     CDS             23697..25139
                     /gene="pyk"
                     /locus_tag="ACJE1S_000192"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HGG0805772.1"
                     /translation="MLKKTKIVATVGPASEKEDVLRQMIINGVNVFRLNFSHGTHEYH
                     KNNLETIRKVSRELNTRVGILQDISGPKIRTGELKTPFELKKGDRLDFYYEKIIGEQI
                     APNHYKLSINQSEILNMLKLDEYVYLYDGSIRAKVTAKDSEKIETLIENDGFLNSNKG
                     INFPNTKINIDVITQKDKKDLLWGIENEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIASSDGIMVARGDLGIEVPYYKVPNIQKAIIHKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDVMCQTI
                     IETEKRYPYNKFNEFENLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKISRYRP
                     DMEIIAVAHSEKTLNSLSIVWGVNPAILVNKSEDLTDLLRDSVKSSVEKGFMNKEKCY
                     LLTAGFPTGVEGTSNLIRILAKEQIAYYLK"
     gene            25231..25857
                     /locus_tag="ACJE1S_000193"
     CDS             25231..25857
                     /locus_tag="ACJE1S_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805773.1"
                     /translation="MQINTFSNVASMAQAQVSNKKADGNATENTKDTNVQSANSNQDI
                     LDKLNALGGKGISQIYLVQFQQQTMSTVLNTSNAQAGINDLLGGNDLNSVKSMLSDID
                     FASLGYNGKNPLTMNTDELNQLISEEGFFGIDNTANRIADFVIKGAGNDVEKLKKGLE
                     GIKQGFEQAEKIWGGELPQISQDTIEATIKKVSDRIDELGGKTLDLKA"
     gene            complement(25886..28348)
                     /locus_tag="ACJE1S_000194"
     CDS             complement(25886..28348)
                     /locus_tag="ACJE1S_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG0805774.1"
                     /translation="MADKEDIVLEKPEDTLNEPRLDESLGEFKGQEGQAPEDEEFASL
                     PEELPRENSDGGFKFTRESAPEESSTFEEVKEDEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFNEGKVKPDIIASKPIEQPVVMPDESYNYNDMTRVDGMIQKANALYLKGE
                     VEQALKVYEQIAVYNESLSNYNLGVSQMNEGKFDEAFDSFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFKYYIDLAQVYLPKEGKSKLYDYYLALINYYKGYYPEALQMLQRVNS
                     EPYTDVAKYLSAKIYAKMDFDAKSVQQLNTQGSFEPSLSLGLLYARMGEYDKAKIALN
                     TAMKIERDFNQSLSALTLVDIKTGDFQDMLLRLQDTYRNDEDKYKILDRYKIKVRLNK
                     ELFNIAIAQRNFSNDILKKQKDQFDLLFYFAPYQVFDSKQASLYIKKANITNFIDDSS
                     DGQSYLARSQALSSTNVKISNIINDALNQKLRLANKEFQALLEDYPEHSILQYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCGKLSDNDTTKLYHEILDNIAADSN
                     FKANMQKNMLFLANGDYISMLPYLDENGQKTPLNLIFETIIAKNNNLNNQVDVRIAKL
                     RSELPQDIVANILYFNSLNSNLNIKEYAQNAQIHFKNLQVDYRSVFGGSNIARELYVN
                     LMHIAGLLNLERQKFKTLINTSKVKDEGMIQTLAYLDIFAQQYEESYALYNTLIDEYG
                     AKDSRTLFLASVAAVGANNPNSAIALLQLSKLTDKNNKESKVALGLLYQEVGNYEAAM
                     TQYRTLPNDFKSEFFTFDIKNQ"
     gene            complement(28358..29593)
                     /gene="serS"
                     /locus_tag="ACJE1S_000195"
     CDS             complement(28358..29593)
                     /gene="serS"
                     /locus_tag="ACJE1S_000195"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HGG0805775.1"
                     /translation="MLDLKNLQNNFDEVAKKLQNKKVDENILKNLAELFTNLKKEKAS
                     LEEFQAFQNKFSKELATVEDKESLKAKLSENKIKINEQNAKVNALENELETIAHAIPN
                     IPDECVPVGEDEEENVEIKKVLTPPQFDFTPKEHHDLGESLNWLDFVRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNSPTMFGTGQLPKFKDDMYKIED
                     EDLYLISTSEIPVTNLYSGEILTSESLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSIFNEMVECASDLLSSLGLAHRHLMLCTGDLGFSAAKTIDLEV
                     WIPSQNKYREISSVSNCRDFQARRAKIRYKNEKGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGRIQIPDVLKKYF"
     gene            complement(29603..30562)
                     /gene="trpS"
                     /locus_tag="ACJE1S_000196"
     CDS             complement(29603..30562)
                     /gene="trpS"
                     /locus_tag="ACJE1S_000196"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HGG0805776.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIRQMVEAQEKSEMFMFIANYHAM
                     TSSQDGKKLEQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQLVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEAKINEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDFKSCNVFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILELGASKARKIAQEKMQKIYEKIGL"
     gene            complement(30559..31053)
                     /locus_tag="ACJE1S_000197"
     CDS             complement(30559..31053)
                     /locus_tag="ACJE1S_000197"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HGG0805777.1"
                     /translation="MKVKNIIFIGFMGSGKSTIARALAKDLDLVFLDSDGLIEMKFDQ
                     KISEIFKEKGEAFFRQEEQKVANFLCSCNGASIASGGGFIHVLDFDKIGFCIYLKASF
                     EYLKKRLSENEIAKRPLFYDEVQAKRLYNERLNKYEQKANLILDVENKSIDELVIEIK
                     KVIK"
     gene            complement(31043..32425)
                     /gene="der"
                     /locus_tag="ACJE1S_000198"
     CDS             complement(31043..32425)
                     /gene="der"
                     /locus_tag="ACJE1S_000198"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HGG0805778.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSEISGTTRDTNKTEV
                     FINSKKALLIDSGGLDESNELFKNVKKNTLKIAKQSDIILYLVDGKLSPDDEDRQFFH
                     SLKKLGKPIALVINKVDNKKDEERSWEFANFGVKEVFNLSVTHNIGLDELYNWLENFL
                     DEQFLIPDEEENLEDFLEHYEEGKEFQFKELDQNYIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESIVYKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSN
                     SQIALLVLDANEGFNELDERIAGLAAKHYLGVIIVLNKWDKTEFEFDKVVKELKLDRF
                     KFLAYAPVVSVSALSGKRVHVLLEKILEVFTNFTQKIPTSKLNDLIASATKAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            32541..33473
                     /locus_tag="ACJE1S_000199"
     CDS             32541..33473
                     /locus_tag="ACJE1S_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG0805779.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGVLFIVYLLKRSKVHKEGGHFWLLVFRGVTGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFIIFKENIGAKGWLGILIAFSGVLLIAQPWADSSTHSGFDLKNSIIGV
                     MSGFLAALALTSVRELRKFYTTEQIAFSFILLGALMPLISMIGAEFFEPKHLDSLHLD
                     FILAPFVMPSLTAWLIIAVMGALGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMVV
                     GIILGDDLPSAMVFLGIIGIIFGGIILVKNKGKK"
     gene            33470..34282
                     /gene="kdsA"
                     /locus_tag="ACJE1S_000200"
     CDS             33470..34282
                     /gene="kdsA"
                     /locus_tag="ACJE1S_000200"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HGG0805780.1"
                     /translation="MKKMILIAGPCVIENKDLVFKVAQNLQEFNENENIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKVLQSVKNEFGMKILTDIHESTQAAPVSEVVDVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEEEGYEVADKNGIF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGVDGFFFETHTNPCEALCDGPNMLDLNRLKACVKTLLEIQNIIEGK"
     gene            34284..34748
                     /gene="ribE"
                     /locus_tag="ACJE1S_000201"
     CDS             34284..34748
                     /gene="ribE"
                     /locus_tag="ACJE1S_000201"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HGG0805781.1"
                     /translation="MTIIEGKLNLDSNTKIAIINARFNHIITDRLVEGARDAFLRHGG
                     KEENLSLILVPGAFELPFALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEF"
     gene            34748..35146
                     /gene="nusB"
                     /locus_tag="ACJE1S_000202"
     CDS             34748..35146
                     /gene="nusB"
                     /locus_tag="ACJE1S_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HGG0805782.1"
                     /translation="MATRHQVRQSVISLLYALEMNEKNENFIDEFLNEKKIRNEQKNF
                     TLSLYEGIIKNLDDIDKNLNPYLNENEIEKLGHIERAILRLGAYELLFTDTPNAIVIN
                     EAIELAKELANDNSPKFINGVLDTLVKAKQ"
     gene            35143..35982
                     /gene="pyrF"
                     /locus_tag="ACJE1S_000203"
     CDS             35143..35982
                     /gene="pyrF"
                     /locus_tag="ACJE1S_000203"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HGG0805783.1"
                     /translation="MKLCVALDLATKEECLRLAKELKGLDLWLKVGLRAYLRDGFKFI
                     EELKKIDEYKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKVAMQEVMSRLN
                     RFNKRPLVLAVSALTSFDEENFYSIYKQNIDEAVIHFSKMSYQNGLDGMVCSVFESKK
                     IKEHTNSNFLTLTPGIRPFGEASDDQKRVANLTMARENLSDYIVVGRPIYKNENPRAV
                     CEKILDKIHRKNISENDIEQNYEAMQQKEWDMCNHFEEWIKTQPDKEQALKEFYTKCG
                     IKY"
     gene            35979..36758
                     /locus_tag="ACJE1S_000204"
     CDS             35979..36758
                     /locus_tag="ACJE1S_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805784.1"
                     /translation="MNYQQLECDYFNLYNQFISVDFQISLFEKNHKSLIKDFIFFYHQ
                     ILKQKDLNFLLGVRNKIALKVHNYMQEYSTSPKDLSLICLREHKHIEFFQRFYKALAY
                     FVAFRKKLDEEQKIKNLISNIHEYFGCHFINSDFNNLQNFQKNDFFTLPEKCLQYFHL
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLIDGTFEIYELIFKEYFLLFPKDEELKDEL
                     KKIKNLEFKILMQEVSRVKLLNHYKEFCEEIFYNIELEKII"
     gene            36820..37713
                     /gene="msrP"
                     /locus_tag="ACJE1S_000205"
     CDS             36820..37713
                     /gene="msrP"
                     /locus_tag="ACJE1S_000205"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HGG0805785.1"
                     /translation="MIVTPEKLYKQRRDFFKLGAGALIGSSLIVSKLSALNFINDTNA
                     NKLEISNEELATNYINFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPFTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIDMAKPTSEAKFIKFTTLLDKNQFPD
                     QDALFPTVEYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFVKEQPIGTWEKYAPNEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYAGMDLKANY"
     gene            37713..38261
                     /locus_tag="ACJE1S_000206"
     CDS             37713..38261
                     /locus_tag="ACJE1S_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HGG0805786.1"
                     /translation="MRTKYFKFLAYFAFLASLIYGFYHILKAFDFVKEAYIYTGVFAL
                     FFLNLSLLFSLCKFKKTKSYPKLLGIFAAFWAFLHFLNYFIFDRNANFLRLFDDISHR
                     LLEASGFFAFIIIFFMFLSSFRFFKRIEKIRKLGYVCLVLASYHYFLSPKVPMFWEWS
                     ALMLSLVYFMIRYLKFFKFKKA"
     gene            complement(38258..39970)
                     /locus_tag="ACJE1S_000207"
     CDS             complement(38258..39970)
                     /locus_tag="ACJE1S_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG0805787.1"
                     /translation="MVRLKEFLSLKNIEESQIYKELKCSKNEALILRELCKNYVISIS
                     SINAFTLLTGIFGSEKYSYLDTLEDLKRLIERGFVNQNSGFFKNIESNKSQNLILSLL
                     QSELSLSEYFLEFLEAKPRLNLDKKEAYGEYLEYLKDEFMRVELYERLSFIRSSTYSD
                     ELKAQIKLYEKHIKERLKKSKFYNILADIFKEYSLEYKEQIIFLALLKEEYTLSNENS
                     VSREMNSLLSLVSENDLEKHKNKSLLQENAPLLNLIEYDEYLNAFGDISKSFFITDEI
                     LQRIINFEPKQNKKIKIENVLKEQDIFELIEPSIDINDIIMPQNTKELLENILKQQDK
                     KVLERLNSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKTVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVESSSGSDKMHNQMQNIF
                     LEQIERFNGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKMWEKFLPRKASFE
                     KAFDVNLLANYELSGAQILMVVKNTALKVAVTEDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(39972..40793)
                     /locus_tag="ACJE1S_000208"
     CDS             complement(39972..40793)
                     /locus_tag="ACJE1S_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805788.1"
                     /translation="MKIGLLLCFFVSLVCAQIYKGEIYFYDLKDKQVFAIVYDNAPFV
                     PIFDRDVNQTSSSFLILSDLDTNIEIALFQTANSWEDGEKKYKISSSKELVFDNKKIQ
                     GNKLGTTTLELIKEQNNIRIKRSLDFLAHQDEIRQFRPMYNDIVSFEQIRQKPIVLKD
                     GKLSFEEWYYFYEEDNRAILELNNFVFDMDKKVFLSLNELYDVDNLKFKELLHQKLNL
                     VCDECFDDMEQVFFNNNFLITNLGLRLCYLPYENHYLNENICVDFNENEIKEFRK"
     gene            complement(40790..41272)
                     /locus_tag="ACJE1S_000209"
     CDS             complement(40790..41272)
                     /locus_tag="ACJE1S_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805789.1"
                     /translation="MRKIFIFFLILFFSACALKNQDYSSQKMKVVFSTPTIKINDFGF
                     LKKENKALNLEVYKLGQAFFKLKIREDICLNSVCYSKMVFNQKFFKNAYYEDILKDIL
                     EAKPLWNGKNMQKTQCGFNQNLNSANYEIFYEICDNKISFVDRISRIKIVLMNFKDKI
                     "
     gene            complement(41283..41774)
                     /locus_tag="ACJE1S_000210"
     CDS             complement(41283..41774)
                     /locus_tag="ACJE1S_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HGG0805790.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIEF
                     SEKDGVFKLHSSSEAKLDVLKDIVISKLIKRGINSSAIKELSRESGAMFRLNLKANDS
                     IDSENAKKINKAIKDSKLKVSSSIRGDEIRVVAKQIDDLQAVMKMVKELNLELNLSFK
                     NLK"
     gene            complement(41764..42699)
                     /locus_tag="ACJE1S_000211"
     CDS             complement(41764..42699)
                     /locus_tag="ACJE1S_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HGG0805791.1"
                     /translation="MKIVCLDAATLGDYDLSIFKNFGEFQSYALTDRKETIERLKDTD
                     VVMTNKVVIDKEVMDACPNLKLILETATGVNNIDVEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFIFAFLNHIPYYDKWSKEGKWCDSPIFTDFGRILNSMEGKKHGIIGLGSIGKEV
                     AKISSAFGAKICYYSTSGLNQNAEFECLNLEELLRTCDIVSIHAPLNEKTKNLLTYEK
                     LKLLKDNAILVNVGRGGIINENDLAKIMDEKNIRVGLDVLESEPMIKNHPLLNIKNKE
                     NLIITPHVAWASKEAVEKLMSMVYDNLKEWIENGK"
     gene            complement(42702..43871)
                     /locus_tag="ACJE1S_000212"
     CDS             complement(42702..43871)
                     /locus_tag="ACJE1S_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HGG0805792.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISDKLVCVSENEAN
                     AYYEAVNELYDMFVAAAQNVIDNNRFDELGIPFNLVDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWAILKQNGMDESKQFNSIYESLMDNFKRLI
                     TLEEDTQGFEEYYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFETDFSFVDEVEFS
                     EEGIFKEGVNYEYWFKLVPWEDIAIEEGELAMLLTQIMRNQKAIILNPAYTLLFQSKG
                     ILKILWELFPNHPLLLETRDVPLEGKDYVKKPVFGREGANISIIKEGKILHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(43881..44486)
                     /locus_tag="ACJE1S_000213"
     CDS             complement(43881..44486)
                     /locus_tag="ACJE1S_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HGG0805793.1"
                     /translation="MKKIKKIIQIGMISGLAAVAGGALVGCGSSNDNSDTLNQAANTQ
                     GAFVIIEEIAPGQYKIKDQFPSDETRVVLKDINGTERVLSKEEMDALIKEEAAKIDNG
                     TSNLTKEGGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTAGSASSASKSGFFGGGSKATSSSSSFGS"
     gene            complement(44689..44901)
                     /gene="rpsU"
                     /locus_tag="ACJE1S_000214"
     CDS             complement(44689..44901)
                     /gene="rpsU"
                     /locus_tag="ACJE1S_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HGG0805794.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            45047..46423
                     /gene="ccoG"
                     /locus_tag="ACJE1S_000215"
     CDS             45047..46423
                     /gene="ccoG"
                     /locus_tag="ACJE1S_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HGG0805795.1"
                     /translation="MENHITNYTKKRYFVYLIATIVIFCLPFITINGNHFFLLSFDHS
                     KLNLFFISFSTQELYLMPFLLIFLFLFIFFITTLGGRVWCAWSCPQTIFRVIYRDIIQ
                     TKLLKIRKNINNKQKEYEGYYFKKIIGVILFYFISLVAVSNLLWYFVPPEDFFAYIQN
                     PGEHLLLLGVLFCASLFLTLDITYLAEKFCIYVCPYARVQSVMFDRDTMQVIYDEKRG
                     GVIYDGHTKLYKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSVKAIETRKKVNYLRFRTIAYFIVLVIALIALMIMGSKKENMLLNIN
                     RSSELYQISHTNNGLEISNAYTFLFQNTDSKAHEYYFEASLEGIDNGIEIIRPSKAFT
                     LKAGEQAKKIVVIKATKKLADNDQKDVIFPLHIKAYAKDNDEIVIFRESIFVYPKSTI
                     LKGYNESK"
     gene            46410..47045
                     /gene="cmeR"
                     /locus_tag="ACJE1S_000216"
     CDS             46410..47045
                     /gene="cmeR"
                     /locus_tag="ACJE1S_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HGG0805796.1"
                     /translation="MNPNKTPSKKVLARREKIKNVAFDLFLTKGFQETSLSDIIKLSG
                     GSYSNIYDSFNSKEGLFFEILDDVCKKHFDLIASQTQTIKDKNLKEFLTSFGLTFVDI
                     FNQVQTVAFGKIIFSQVYDKHKHVKNWIENNQKIFSYSILIELFKKQDSSYISNNAQK
                     LAMLFCAMLREPYHSLNVLADTPLMNKQEQKEHVEFIVNIFLKGIENKTSI"
     gene            47153..48256
                     /locus_tag="ACJE1S_000217"
     CDS             47153..48256
                     /locus_tag="ACJE1S_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HGG0805797.1"
                     /translation="MNLFQKNTLLLLSALFLFSACNKEEAPQKQTLPQSVSTMSAKAE
                     NLPLNFTYPAKLVSDYDVIIKPQVSGVIVEKLFKAGDLIKKGQTLFIIEQDKFKASVN
                     SAYGKALMARANFDNASKDYNRSKTLYNKGAISQKEYDSALANFNNTKANLTSARADL
                     ENARIDLAYTEIKAPFDGIVGDALINIGDYVSSSSTELVRITNLNPIYADFYISDTDK
                     LNIVRNTQDGKWDLSNIYANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            48256..51378
                     /gene="cmeB"
                     /locus_tag="ACJE1S_000218"
     CDS             48256..51378
                     /gene="cmeB"
                     /locus_tag="ACJE1S_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HGG0805798.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAINDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQSPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFIPVSFISGFVGEIQKQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLYKQVPGSLVPEED
                     QGLMIGIINLPSASALHRTISEVDSMSQEILKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLEDWKDRNVSADEIIMELNKKFAPDRNAASVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFPQYKLIIDRDKLKHFNLNMQDV
                     FSTMNATIGTYYVNDFTMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAISQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTGSYAFALGMVFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKKIFDAAIEAAKLRFRPIVM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            51371..52849
                     /gene="cmeC"
                     /locus_tag="ACJE1S_000219"
     CDS             51371..52849
                     /gene="cmeC"
                     /locus_tag="ACJE1S_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HGG0805799.1"
                     /translation="MNKIISISVIASLSLFISACSLSPNLNIPEANYSLDNKLGALSW
                     EKENNHTLSKEWWKEFDDEKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLP
                     KLDGSASANRAKTPTNAPSNRTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGF
                     KASQYDYEAARLSIVSSVVQTYFNFVNANENEKALKDAYESAQEIYQINYEKFQVGAV
                     GEYEIAQSRANLESTALQYNEAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKD
                     FDIPSGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNT
                     LVEAGSRTWSIGGNFVMPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYAL
                     IARKTIRLQYNNAQASELSYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNT
                     KYSYANSIVNVIKAFGGGFEQGENISKNIEEESKTLDMSFRE"
     gene            complement(52878..53129)
                     /gene="cmeU"
                     /locus_tag="ACJE1S_000220"
     CDS             complement(52878..53129)
                     /gene="cmeU"
                     /locus_tag="ACJE1S_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmeU family protein"
                     /protein_id="HGG0805800.1"
                     /translation="MDKTKVVENLNALFKQRAEFYSYFDKNISKVGNTEVFDFSNAKD
                     LNAEEVYKQFYHLDYAMRKLLPAIYKAYEVSDSDLNRDF"
     gene            53254..54564
                     /locus_tag="ACJE1S_000221"
     CDS             53254..54564
                     /locus_tag="ACJE1S_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HGG0805801.1"
                     /translation="MNLFQNLALKYSHAMMEKSLHKSFNVELLKNPQEKQAKKDKTYM
                     LYAHIPFCHTFCPYCSFHKYYYDEELAKIYFENLRKELMLIKDKGFDFSSMYVGGGTT
                     LINENELLKTLELCKKLFNIKEISCESDPNHIIPEKLSMFKGIIDRLSCGIQSFDDEI
                     LKKIARYNKFGSSKQLQEKISKALGILPIFSLDLIFNFPSQTEEQLLNDLKIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVETKDNEFKYYQMIRNFFKDYQQNNGWSFSLEKNQ
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFDLNDYAKMIQEKQNANIAKASFTRKE
                     IIKYIFLTEMFAGKIQIDKFNQTLNCDLEKELFKELLGLKISNAIKKENGALITSEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDSKRLKNKDFINIMKENISSI"
     gene            complement(54597..55049)
                     /gene="hemJ"
                     /locus_tag="ACJE1S_000222"
     CDS             complement(54597..55049)
                     /gene="hemJ"
                     /locus_tag="ACJE1S_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HGG0805802.1"
                     /translation="MTEWINEYYSWIKWVHYLAFVSWMAGLFYLPRLFVYHAENKNNK
                     GFVDVVKIQERRLYFGIQNPAMIATVISGSLMLHAHKEVLMVGSGFMHAKLTCATLLI
                     IFHIHNYFCLKALANDTSTKSGRYFRIYNEFPTLMFIIIALMMVIRPF"
     gene            complement(55033..55503)
                     /gene="lspA"
                     /locus_tag="ACJE1S_000223"
     CDS             complement(55033..55503)
                     /gene="lspA"
                     /locus_tag="ACJE1S_000223"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HGG0805803.1"
                     /translation="MVKRYKTILIFILVFIAVFAFDQWVKSLTLSGLRWQSEYLDLTY
                     ALNTGVAFSMFSFLEHYLKYLHLALILALVIYLLWQKQFLREHLVAFGMMLGAGCSNL
                     LDRFIHGGVVDMFFWHKWFHFAIFNVADVMINISVALILIKEIFIKKEKNDRMD"
     gene            complement(55496..56833)
                     /gene="glmM"
                     /locus_tag="ACJE1S_000224"
     CDS             complement(55496..56833)
                     /gene="glmM"
                     /locus_tag="ACJE1S_000224"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HGG0805804.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSVTNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYYDDKLIQSSKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALYPSNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALFLKEQGK
                     LKSSVVATIMSNGALKEFLNGHGIELDTCNVGDKYVLEKLKVRGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLCKKKSASTILGQIKPYPQLLTNLKISEKKDLDKIKGLK
                     ELKQDLENKNINVLFRYSGTENLIRLLLEAKDAKILEKEMKNVVEFFKKALNG"
     gene            complement(56929..57954)
                     /locus_tag="ACJE1S_000225"
     CDS             complement(56929..57954)
                     /locus_tag="ACJE1S_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HGG0805805.1"
                     /translation="MKVKSLLIASLVAFSSLNAQSLIEEAKNSGLVALPKDQKGVDEI
                     LKANGVKATEFTLDKVELGKKLYFEPRLSKSGIISCNTCHNLGLGGADGISAAVGHKW
                     TANPHHLNSPTVYNAVLNTTQFWDGRAGTLADQAKGPIESEAEMATPAKLAVEKIASL
                     PEYVKEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDNFLNGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDENGMVKTPTLRNVVETAP
                     YFHNGAIWKLTDAIKEMGSVQLGIQISDKEAKSIETFLKSLTGTKPAVVYPQLPVSTE
                     KTPKPEL"
BASE COUNT        19907 a        10053 c         8030 g        19985 t
ORIGIN      
        1 ttttaaaggc taaatttttg aggtaaaaaa tgacaaaaaa gagcaagcgt gatatggcat
       61 atgaactaga cattgatgtt agcactttat ataattggag aaaatacaaa cccaatttat
      121 atcgtattgt tatgcttggc tttaaatttg atgaactttt agaaaatagc aaaaaaactc
      181 atgaagaatt gcttcatata gaacaaacca tacaagatga aattgctaaa tttaaataaa
      241 atccgctttt aagctttttt ctatacaatt atcactttta ttaaaatcaa ggatttgaaa
      301 tgtttttatt agatttttta atatcattga gttttatttt tgaaatttca gctcttgtgc
      361 tatcctttta ctttaaaaat tcaaaaattt tctttttgac tttagtatta ctaggagcta
      421 agttgcctta tttttataca agtttttttc aagctaattt atttgtggct ttgtttttac
      481 ctatgatttt tactctattt tgccttggaa aacatcatgt tttaatttta aataaaaaaa
      541 atatcgcctc aattacaacc cttattttta taggcatttt aagcatcatt ttacctagaa
      601 atactacttt caatagcgct ggtttagaat tccattttat tacattaaat ttttttaaac
      661 ctgtgagtga attaggattt ttattttttt tagtcggctt aatactcatt tttatcaaaa
      721 cttttaaaac taaagaatat tatcttctta tcgcattttt tgctgcatat tttcagtttt
      781 tattccaaga aggaacagga ataagatatt ttgaatttgc aagtttggtt ttttgttttt
      841 atcttttaaa ttacgcttat aggttagctt tttttgacac cttaacaaag ctacccaatg
      901 aaaaaagcct tacacgcttt acaaaaggaa aaaacaacta tatcattgcc ttgcttcatt
      961 ttaatgaact aaaagatacc aaagaaagct ataccaaact cattttaaaa caaattgcaa
     1021 aaattttaaa acgctttaga gcaaaaattt ttatcgtaga aaatgatttt attttaattt
     1081 ttaatgataa aaatcaagct ttaaatcatc ttgctttttt agaatccacc ttgaaaaaca
     1141 cggaatttaa tttagaaaat gaaaatttta aaccggattt taaattgatt tggcaagaaa
     1201 gtgaagaaaa tttggataaa aatttacaaa gtctaagagc aagactctta gactaaaaaa
     1261 ttatttttcg ttcgcttcaa cttcgatatt taaattaata tcatcactta aagtaatagt
     1321 tgaagtacct ggcgcaaagt taaaatcaga gcgtttgatt ttaccattta aagaaaaacc
     1381 tactttttct tttccatctt tacccttagc tgtaccgccg atttcagtat ctaaaaccac
     1441 atctttagaa acgcctgtta tggttaaagt tcctgtcatt ttaccctttt cgttatcgat
     1501 tttttcatat tttttcatta caaaagtcat attagggaat tgttttgctt tgaaaaaatc
     1561 attttgttgt aagtgattat ctcttgtttg attgtctgta tttacagatg ctactttaat
     1621 tgttgcttca agttttttaa attcaaaact tgcaggatca aagtcaatta ccgcatcata
     1681 atcttgaaaa tttcctttta cattgctaat ttgcaaatgt ttaattttaa aacctacatc
     1741 agtgtgagtt ttatctaaag tatattcttt agcaaataaa cctgcactca acaaagaagc
     1801 tgcaacaaga gagcttaata aaatcttttt catttttttc ctttttttgt atttttatgt
     1861 aaaaagaatt ctaataaaca aaaaacaatc aaccattaat gataatttta gtccatttta
     1921 tttttaagaa aaatcacaaa ttcatcaaaa ctaggcaaat ttaagtcttt taattctctt
     1981 tgctgcttgc cccacataca ttctggaaaa aaagcatcct ctttaaatct cgccattata
     2041 tgaaaatgta cccttggaac atagtttgca aaagaagcaa tattgatttt ttcaggtttg
     2101 taaaattcta tcatagcctt ttcacatcgc aaaattttgt caaaaatttc tttttgaagt
     2161 tcatagggac aatcgctaaa ttctttataa acttgcttgg taaaaatttt aatccatggc
     2221 acttgagctt cctctttttc gatataaatc aagtcattct cataaatcat taatcttcct
     2281 ttaaaattgt attgattgtt attttacaaa atttatcaaa attttaagtc aaaatgcgtt
     2341 aatattgtct aaaatataca aaaaaataaa ggaggaaaaa tgcaaattgg cttaaattac
     2401 aactatgcta gcaattcctc ttattatgat aaaacacaaa aaaataatgc cgaacaagaa
     2461 aatacagaaa atacaaactc acaaaataaa gactcaaaac aaaacaatga acaaactcaa
     2521 atgataaatg gcgttgagct taccatacaa caagtacaac aagtgcgtga gcttcaaagt
     2581 atagacagaa atgtaaaagc tcacgaagca gcacatcaag ccgctggagg tggtttagct
     2641 ggagctgcaa gctttagcta cacaagagga cctgataatc aaatgtatgc cacagcaggt
     2701 gaagttccta taagaatgca aaaaggaagg acacctgaag aaactatcgc caatgcgcgt
     2761 caagtcgttg cagcagccat ggcgcctgct gatcctagtc cgcaagatta taaagtcgct
     2821 gcaaatgctc taaaaatgga atttgaagca agagctgaag caacaaaact taaagcgcaa
     2881 gaagcacaag agaaaaaaga agaaaacgaa gaaaagcaag aaaatcttga tataaataat
     2941 caagattcta aagataattt cgaagaaaca caagcaaaca aagactttaa aaatttcatt
     3001 ggcaaaattt atcaacaaaa ttcacaaaat aatccaatca attttagttt agtttcttaa
     3061 aatatttttg ataacatttt aataaatttc tatatcttga gaatttagct ttctataagc
     3121 agcacaagct tcttggtgtt ttttatcgca agccatacct aaatatctct tagccttttt
     3181 caaatctttt ttctcaagct cataataacg tccgatcaaa taacaagcct ctgtaaaacc
     3241 taaagtacaa gatttagaat aaaaagccaa agctgattta agattttgcc ttacaagctc
     3301 tcctctttca tacaaaaagc ctaatttata gcaagctcta gcgtctttta aatcgcaaga
     3361 tcttttataa aaatgcgtag ccatttgacc atctttttca tcttcataaa ccaaacccat
     3421 atgattacaa cttgaagatt cacctaaatt acaagccttg ttaaatgcca aaagggattc
     3481 attaacataa cctagatctt gtaaggttaa ggccatatta gaacaagcct tagtcaaacc
     3541 gagtttgcag gatttatcat aaaatttaca cgctttatca aaatctcttg caactccttg
     3601 agcattttca ttcatatagg ctaaagaaaa gcaagctcta gcattgtctt tttcgcaaag
     3661 tctttcaaaa atttcatatg cttttacaaa tttatttccc tcataaagcc ttaaagcatt
     3721 atctaaatca ttcacagcaa aaagagtgtg aaaaaataaa gataaaatga aaaatatcct
     3781 cataaatttt ccttcaatac acttctgact tctaaaattt gctctttgcg tttttgtaat
     3841 tctacttttt ttaagtctaa aattttattt ttttcttgaa ttatatttgt attttgttct
     3901 aaaaaatgat tagatatttt tactaaaatc ggtttattga taagcaaagc ttcaaattca
     3961 taagcattaa gctcagttaa aaccctttca taaatttcac tctttttagg ataaaaaagc
     4021 gtaaattcgg aactatctag ctcataaaga actcgacttt cattgatttt tctactgaaa
     4081 aatgccaagc ttaattttgt agcgtttgca taatttgcaa aagctttgag atttaacttt
     4141 tcaaaaaata aatccaactc tagcaaactt ttaaataaaa gctctttaaa gtcttttaaa
     4201 aagtactcat cgcttgcatt gcaaaaagcc ctaagttcgc taaaattttt atcgctttgc
     4261 aagatattat ctttttgtat atttgaaaat tcagctttaa aaagcaaaat gtctttttct
     4321 aaattgtcta taaaatcttt caatttttgt tttatttttt caaatgattc gtaaatttca
     4381 tttttgattt ttttaaattc tttattcatt atatcgctgt tgtaaaacat tgccaaaaaa
     4441 gcatcatcgc tcgaaataaa aggagcttta taatcgtatt ttacatacaa atcttttttc
     4501 aaaaatccct tggcttcttt ataaaaatga gcctcttttt ctttaatgca attaaaaatt
     4561 tcactcgcaa ttctttcgcc aatgctttta agcttattta aaatttgatg atttaaaatt
     4621 tgaacttctt ttataaaatc atcaaaagaa gaatttaatt tctcttgata aatttgaaat
     4681 tgatttgcaa gcttatcaaa aatatccaca aaaagcctat tttcatcctc taaaacttga
     4741 cataaatgaa gcatttttct ctttgtaaat ttttgtttta aggctttctc atctaagtta
     4801 tctaaaaaat ctaacaaaag attaaaatta gattcttcat attttgtttc atcttttgct
     4861 tccttgcaag aaatggcaat taattcttta aaatatttag aaaaaactgt tttggcataa
     4921 tttaacacat tttctaattc ttgagcgcta agcttatctt tttgatttaa cacacaaatg
     4981 ctattttcac ccaaaagctc caaatttgcc tttatagcat cttcttcgct cttttttcct
     5041 gcattatcga tcaaacttaa ccaaattgcc gcgtggatat tttggagctc ctttagggtg
     5101 gttaaagtat catcttcatt agcattaagc cctggagtgt ccactagggt gattttttta
     5161 agcaaaggta tgggtgcaaa aatatgcaaa ctttttgttt cttttacatt atttctttga
     5221 tctgtgtatt ttgccaactc ctctatatga gtgatttcat cacttccatc ttgaaattca
     5281 actcttaaaa aatactcatc cgcataacgc aaaaaagtgg gtttaaaagt aacaggcact
     5341 actccagtag gcaagcattc tttttttagg attaaattca aaagggttga ttttccactt
     5401 gaaaattgtc ctatgatagc aatattaata tttttatcta aagaaaaact caattcttca
     5461 agctcttgaa taagattata gcttgggtgc atgaaaggct catttagttt tttacacaac
     5521 attttaattt gcccttcaaa acttttatca aaatctatat tataggcatc ttcataagcc
     5581 tttataaaat gatttaaaat attaatttgc attcataagc tccacttcaa gctgttgtaa
     5641 ttttgcaatt ttttccaaat ttccctcata agaaaataaa atgtcagcat tttgattttt
     5701 aagattattg attaaatgtt caatactcgc taacttttct ttttgcaata cttcataatt
     5761 tttcattctt tcattcaaga aagcaaaaaa ggcgccattg atatccaaat cctttaatat
     5821 agcacctata ttaaaacttt caaaagtgct aaaaatcact tctgttaatt ttgtttcaag
     5881 ctcaaataaa tcgactttgg tagagataat ttgctcgatt tgcagtctta acaatgcaaa
     5941 tttttcatca ctaaaaatat tttctatctt tttagaaatt tcatctttaa agccttcaaa
     6001 tccattgtca aaatcatctt ttaagaaatc atattttaaa gccaaacttg tttttaattc
     6061 ctctattttt ttaatatttt caaatttaac ttctcttaaa atatcattaa taccatcttt
     6121 aaccgtgata tctatcatat ttaaaatacg attaatgtta attttttggg ctttatcttt
     6181 tagatattta atctcatcaa tcaaacgctc tttgagcttt ttagccaata ataaaacaag
     6241 attatccacc ccattttcaa aattttcaag atttaaaatc gaatttgaaa tctcttcttt
     6301 tgcctcctta agcgcttctt ctttagcctt aaattccaat aaaagtttat cattttcttc
     6361 gcttaagcct tgcccgtctt cttttataag cttgttttgc atttcatatt catttaaaat
     6421 atttctaagt tctaaaagca attctttttt ataggcttgt aaaataattt tacttttttc
     6481 tccagaataa agctcattaa aaagatattc ctcaaattct ttcatgccac ttttcttaaa
     6541 gctttcttca gaagataaac ccttgtaaaa atcacttgcc atttttgcgc ttacacataa
     6601 aaaatctatc ttttctatca aatgcgtgtc aaaattttca agtctagcct taagactttc
     6661 tttggtgtaa tttatcactt catctaaatc tttttggctt aacaaatccg ccttggtaag
     6721 gacaattaaa aatttgctaa gccgagaatt caataaacaa tggattaaaa attcagcatc
     6781 tttttgtgtt aaagcttgag aagcattcat aagatggatt agaaaatcgc tttctttaag
     6841 atactcatta gttagaattt ctctttgcac gactatatca tcaagtcctg gagtatccac
     6901 tatagagata ttgtttttta aaaattccaa attgcttttg atttctatct tcttaataag
     6961 agcagaaatt tggtttttag cagaactaaa ctctttaagc tcctttagat tgattttttg
     7021 tgttaaagcc ttatcttgaa catattcttt aatatcgatt tttaaagcaa gctcatcgat
     7081 gaattcttta agctccttgc taaatttgga actttttaat atattatccc attcttgagt
     7141 atcccaaaaa taaatcacgg cctcttgagt attgccatag cttaataaag tcaaattcgc
     7201 ggtttcaggg atattagaaa cccccaaaaa atcctctttt aaaagcgcat taagcaagct
     7261 tgattttcct gaattcataa cacctgttat agctatatta aattctaatt tttgaaattt
     7321 ctctaaagtc ttttgaagtc ttattttgct attttcatca aaactcaatt gactaagttc
     7381 catattgata tgattaagct cattaaaacc actttgaaac aaagcttttt tatcgatact
     7441 ttgaacttga atattttgta tatattctaa aatttcagca ttgtttgaaa ttttttgcaa
     7501 aattcgcaag gcttttaata aatcttgttt aggtataaaa ccctccctaa acatatttaa
     7561 aacacaaatt tgagcttttt gaatgctaaa aatatctact cttaaatcaa tttttttaca
     7621 aatattgcta aattctttta agagaaaata tctttcataa ttatccttat taacactcaa
     7681 tatgatagca agttcggaaa catcaagaat atttttatct ttaaagcttg cattaaaatc
     7741 taaaagctgg agttcatttt gccagagttt ttggagtaat tctttcataa ttttcccctt
     7801 tttaagggga aaatattatt tatttctttg agcaacaagt tgtcttctca tataagcaat
     7861 tttgctttgt aaaggtaaat ttttaggaca attatcttcg caagccaata aagacataca
     7921 tccaaaaaca ccatcatcat cgcccactaa ttcatagaaa tcttcaactg ttctatgatc
     7981 gtgcggatct tgtaaatatc tagctgttct taaaagccct gttgctgcga taaaattcgg
     8041 gcgcataagc ttagttgcac acgaagccac acaaattccg cactcaatac aacgatcaag
     8101 ctcaaaagtt tcctctgcta cttcaggttc tatgcgttct tcaatttttg aaatatcggt
     8161 ttctttttca ttatgtaccc aactttcaac acgcttacac atatcctcaa accactcgcc
     8221 tgtattgaca ctcaaatcct taatatgtct aaatgcaggc ataggcataa gctcgataac
     8281 tccatcagaa taatcttttg ttaaagtctt acaagcaagc tttggcacac cattaatcat
     8341 cattgcacaa gatccacaaa tccctgcacg acaaacaaag tcaaaactca aatccgcatc
     8401 cattttttcg cggattaaag tcaagcacac aaaaactgtc ataaaaggag tttcttcaag
     8461 ctcgtaagtt acaaaatgag gttttgaaat tttgcttaaa ggattatatt taaacgcctt
     8521 tatcgttaat tttctactca taatccactc ctattctttg atttagcgct ttatattttg
     8581 gttgtaattc ataaggcatt aaagcgtgct gaatttcgtg acgattttta ccttcagctt
     8641 ccattttttc gcggattgca tcaacttcag cttgacgctt ttcacttaaa ggattttcta
     8701 tgatattacc tttagcacca tacccacgga atgcaggtgg catttccatt ttcataatat
     8761 caagttcatc gtattcaaca cgaggcaagc tttcgccctc tacccagtaa gttaaagttc
     8821 tcttcatcca gttcaaatca tctctttttg gataatcctc tctatagtgc gccccacgac
     8881 tttcagttct taataacgct ccataagcta cacaaagtgc aactttaagc attcttggaa
     8941 ctctataagc ttcttctagc tcagggtttg cacaatcaag ctctttacaa tgtactttta
     9001 cattttgaga ttctttataa agtttttcaa gctcatcaac agcttctttt aagccttcac
     9061 ctgttctaaa gattgctact ttatcccaca tgatttcttt cattctattt ttgatttcaa
     9121 aaacagaata tttaccttct ttatctacta aagattttaa atattggtat tcttttgtta
     9181 aaaagtcttt tactatattt gtatcgataa cttcaccatt atttttacaa taatctgcaa
     9241 aataatcccc tataatcata cctgcaacaa cggtttcagc acagctattt cctcccaagc
     9301 ggttaaatcc gtgcatatcc caacacgctg cctcgccaca agcaaaaaga ccatctaacc
     9361 attgactctc gcctgtaggt tttgttctaa tgccacccat agaataatgc tgcataggta
     9421 aaactggagc ccaacctttt ggaccttcat cagcaggatc aataccattg aaagttttgc
     9481 aaatatcttg cacatcacga agattttttt ctacatgtgc acggccaagt atggaaatat
     9541 caagccacaa atgatcgcca taaggacttt ttacaccctt accttttcta atatgctcca
     9601 tcattctacg acttaccaca tcacggcttg caagttcttt tttctctggt tcataatcag
     9661 gcatgaaacg atatccatcc acatcacgta aaattccacc atctccacga cacccttcag
     9721 taagtaaaat tccacttggg acaataggcg ttgggtgaaa ttgcacagct tccatatttg
     9781 aaagtctaca aagtcctgtt tcaagagcta tagctgcacc tgttccttca cagataaccg
     9841 catttgtggt ttgcttataa attctaccat aaccacccgt tgctatcatt gttcctcttg
     9901 caatataagc aatcagttgc ccattagtta aatcccttgc aattacacct aagcattttt
     9961 tgccatcatg gataactcta accgcttcca ttctatcgat aatttttacc tgatgtttga
    10021 tagcttcatt agctacgcca taaagcatac agtggcctgt agcatcagct atataacaag
    10081 ttctccattt tttagttcca ccaaagtcac gagcattgat gagtccatga gcctcttctc
    10141 tttcttcgat tacagttttt tgtgcgttaa taacaactgt tcttggtcct ttagttaccc
    10201 tagtccaagg aaccccccaa gaagcaagtt cgcgaacggc ttttggagca gtttgtgcaa
    10261 acattcttgc tacttcttga tcacaacccc agtcgcttcc ttttactgta tctgcaaagt
    10321 gtaaatcttc gttatcacct tcacctttag caccatttcc taaagaagct tgcatacctc
    10381 cttgcaccgc agcagagtgc gaacgcttta ccggacaaat acttaaaagt gttacacttt
    10441 gaccactttt tgccacctct attgcagctc taaggcctgc caaacctccg cctattacta
    10501 aagcatcact atattgaata ttcataattt gctccattat aagtttttac cattgcagtt
    10561 gtttgacttt gatagttttc aaatccaatt ttcgcaaatg ctgcaagact taaaactcct
    10621 aaaaccaaga agaaaatgct gattatccat tttgccatct tgagtttttt acgacttttg
    10681 cgaatatctt taacatcttt tgcttcaaac cagccccatt ttacacaaag tctataaagc
    10741 cctatactac catgcaattc cacacagatt aaaagtgcga tataaaaaag ccacataaaa
    10801 tgattgatca ccctatcacc tgacatatca gcagaaattt tatctccatt tgtgataaca
    10861 aaaatcaagt gcgcagagcc taagaaaaac attacaaaac ctgtaaatgc ttgaacaagc
    10921 cataatgaag tatcaccatg attcattttt ttagcatgag ttctaagaat ttggtattgg
    10981 cgaaaattaa taggaaattt tctcatagcc aataaagcat gcacaaaaaa caccaccaaa
    11041 acacaggcag ctaaaaacga ggtaatataa ctcatcattg gatcgttata aatgaatttt
    11101 aattccaaaa aatggacaac ggaattaaaa aaatccttac tcaccaagat agtagataca
    11161 aaaaccatat gtacccacat gaaaagacct agaaaaagcc cagaagcact ttggataaaa
    11221 tctaactttg caggcatttt actttttttg ccatcaatgc tcttacccaa atacccttcg
    11281 ataagctcac tcatcttcac tcctttatag aaagaaattt aaaaaatctc ttcattatag
    11341 tacaatagcc tttaatacac attaaatatt tactttttta aactttatgc aaatataaaa
    11401 taacaaggct gctacaaaca taagcaaact caaaatttgt cccatgctca taccccaaaa
    11461 aataaagcct aaaccaaaat ctggttcacg ataaaattca catacaaaac gcgccaaaga
    11521 ataaacacaa gcataaacaa gaataagttc accttgaaat ttttgtttca tttttaccag
    11581 ataaataaca ataaaaacca caactccctc taaaaaggct tcataaagtt gtgatggatg
    11641 tcttaaaact ccctccacat aaatacccca agatacatcg gtaatgcgtc caaaaagctc
    11701 ttggtttaaa aaatttccta tacgaccaaa aacataagct aaaggtacac tcaaagccac
    11761 caaatcaaga aatttccaag gattttcttt gtatttttta caaaataaaa aagtagctat
    11821 caaaaatcct ataatcgcac catgataact cataccacga atgcctacaa attcaccatt
    11881 tgcataagga ttgaaaattt gccaaggatg agtaatataa tacatagtgt gtgcatcata
    11941 aattaaaata tatccaagtc ttgctcctaa aatcacgcca atttccaccc aaataaaata
    12001 actatctaag cgtttttcat cgatatctag cttaaatttt cttacaaaaa atttcgctaa
    12061 aagtaaggct aaaagtaagg ctaaaacata cataattcca taccaatgta ctttaaaccc
    12121 taaaacacta aaagccacaa catcaaaatt tgaataaata ttttgccaaa attccatact
    12181 ttttccatta tttattttgt aaaaatatag caaaaaaact ttaacttgct ataattaaac
    12241 ataatttctt atcttaaagg ttaaaaaatg aaaaaatatt tcttatttat tattgcttta
    12301 tttttagctg cttgcagtgg tgctagcaat aattttgtgc atgtttcaat gcctaatttc
    12361 aaacctcaaa ctcctacaaa agtagagcct atagattctg gggtttcaat catgctagaa
    12421 cctataaata tagaacaaaa taataattat tcagattatt ttgaaaactc tgtacttaaa
    12481 attcgcattg acaaggaagt ggctctttta aaagaaaatt tagaagaaca atttaaaacc
    12541 atagcacagc ttaagggcta taaaatagta acttcaaatc ctgattacac tcttaaaagt
    12601 ttgataaata ttcttataga agaaaaaaat atacaaaaat caaataattt tatgagtgga
    12661 gagtctgtta aatctaattt aggaattaaa tttcaaggaa aaattgattt tattgatcag
    12721 cacaaccctc aaaattcgac caatctaaca agccatacca aacttgactc cttggtggat
    12781 ttaaattacc ctattaaaac caaagatgga ataaatatgt ttaaaactac tatttcaaca
    12841 gtacccacac aactcaataa aggtctagaa aaaccagctt ttgaaataga taaaagtttt
    12901 ttacattttt ataaaaatac tttaaataca ctctataata atcttccaaa agccacagat
    12961 ataggaaaaa ctgtaccaaa tagcaatact gattctagcg gctttaatca ttttgatacc
    13021 aacacaatat ttgaagaaaa tttacctcaa gaacaaaatt tggataatag ctcgcaagat
    13081 atttcttttc aagagcaaac atcttcaaat tcaaatatac aatatgaaaa taacacaaac
    13141 aaaaatcaag atggggttat catttttgaa tgattagcct aaatagtaaa taatactttg
    13201 atttctctta ttatatttga tattttctaa gagaaatcaa aaaaatcaaa actctaactt
    13261 cagagcttct tgcatggcat ttttaatctt ttctctttta tctttgacat caaaaaaaag
    13321 ctcaaaggca aaaacagctt gccataaaag catatcaaac ccatctttta cttttaagtt
    13381 atgctctttg cataatttta aaaaagaggt ttctttgcca taaatgacat caaaggcaaa
    13441 ttttgctctg cttaaaattt tatctaaaag tattttatcg caaggtagat catcatcttt
    13501 taagcctgcc gaagttgaat taaccaccaa atcaaaatca aaatcatcca aggcattata
    13561 aagactggtt ttatataaag taaaatcctt aaatcttttt tcgctacgat ttgccacaca
    13621 aacctctact cctttttgct ttaaagcaaa tgctagagca agcgcagtcc ctccagctcc
    13681 taaaatcaaa gctttattaa tactttcaaa ttctttaata gcttctaaaa aacctaaggc
    13741 atcagtattg taagcataaa tttttccatc ttttaaacat aaggtatttg cagagccaat
    13801 attactagca agctcatctt taacatcagc catttccaaa gctgcttctt taaatggcaa
    13861 agtgatattt gctccttgaa gttttaattt aaaaaaatcc tgtcttaatt gatgataatc
    13921 ttgtagatga tagcgtgtat aaataccatc aagcttgaga acttgaatgg cattgttatg
    13981 aattctaggc gacttagaat gcgaaatggg atcgccgatc acagctaaaa atttcatttt
    14041 aaagtgaaag aaaatgcgtc tttagctact tcttttctaa ttttagctaa ttctgctgca
    14101 acatttgctt tctcaaaagg tcctattaaa accttagtga tttcttttcc acctactgta
    14161 gttttataaa gcttatattc atagcctttt tgttttacag ctgctagctc tcttgatttt
    14221 tgatctaaat tgctcactga aaatatctga acataaatcc cagaagctag accatttgga
    14281 tgaacaggtt tagcatctac atttttaaac aaatcattag cattggcttt tggctcttgt
    14341 ttaggtgttt gttttgcagg ttcttttttt acgacagtct gttttgcttc ttcttttggc
    14401 ttactttctt gttttacttc ctgcttagga ggtgtagtat ttaaaggtgc cactttttca
    14461 gaatttgtcg tatttggctc agcaggcact tcttgatcag gcatagttaa attgatatta
    14521 tcatttgcat taggagctgg tgctaaagaa ttatcatttt gctccccttg aatctgtctt
    14581 cttaaagctt caaattgatc ttcagctgaa gtattttcag taattggcat actctcaaaa
    14641 gaatcagtat tattatcttg cgttatattt aagggttcac ttggtaaaat actttgattt
    14701 tcagtatttt cttcaccact attaatgagt ttcataacta tcataatcac tagaaataaa
    14761 attatcaaag caatgacgcg taagagaatt tttttcattt tttcactttt attacttttt
    14821 tccaaaataa tatcatcaaa ttcattttta ttattttcca taatattcct ttcttacata
    14881 tgtttagacc aagaactgcc tcgttctttt tgatagactt catagggtag tattaatata
    14941 ttaaactctc taggaatatc catacttgga aacaccttcc attcaactgg cattttactt
    15001 gcaaacatca ttgaaagttt agacgctaaa gaataacctt cgtttaacgc agtgtgacct
    15061 ttgtgaatat aaagatgtaa atgacctgga gtctttgttt tgtaagctgt aaaatttata
    15121 aaaccttctt cacgcaaaat aagctgcgca cgatgataaa atctttcagc attaaaacca
    15181 ttataatcaa aaacaatatt ttctacttta ttgtctttgg tgatcaaatc atgagcaaca
    15241 acgattttct tcgctgcatg ttctctcatg atatttaaat ttaaaggagc atcaatcctt
    15301 tcaaatttat caaaaaataa acgacctcga tgtgttattt ttttcataat cttatcgcgt
    15361 cgtatataat aatggtcgct aattatttta atcagcgaca gatccatagg tgaaatcaaa
    15421 acattgcctt ttcatagatt ataaaattac ttgcaagggt tttgagtttt tccttaattt
    15481 ctttttgcaa atgagtattt tgaatatcat ctaaaatatc agctatatag ttagcaacta
    15541 tttgaatttc attttcttta aaacctctag ccgtaagggc aggcgttcct aatcttaatc
    15601 cacttgttac aaatgggctt ctagtttcgc caggcacggt atttttattt gctgtaattc
    15661 ctgcattacc caaagccaaa tccgcatctt ttccgctaaa ttcacgctct aaaaagctca
    15721 tcaatacaag atgattatct gttccatcac ttacaagctt atactttcta tccattaaaa
    15781 ctttagctaa agcttgcgca ttgcttctta cttgcttagc ataaattttc cattcttcac
    15841 taagattaaa tttaaatccc acggctttag ctgcaataac atgcatcaat ggtccacctt
    15901 ggatacctgg aaaaatagct gaattaattt ttttagcaag ctcttcatca ttagtcatga
    15961 tgataccgcc tcttggacca cgtaaggttt tgtgggttgt agagcttact acatgagcat
    16021 gaggaaatgg acttggatgc tcacctgcta caacaagtcc agcaatgtgt gcaatgtctg
    16081 caaaaagata agctccaact tcatccgcaa tctctctaaa ttttgaaaag tcaataatac
    16141 gagcataagc actcgcaccg cacacgataa gctttggttt tacaatatga gcaatttccc
    16201 taactttttc atagtttatc cttccatcaa gctctacacc ataaaaaaag ctctcataca
    16261 tttttcccga tgagcttact tttgcaccat gtgttaaatg tccaccatga cttaaatcca
    16321 ttcctaaaat tttatcacct ggatttaaaa gtgcagcata aacgccttga ttagcttgag
    16381 aacctgaatt aggttgcaca tttgcaaaac tacaattaaa aagtttttta catctttcta
    16441 tagctaaatt ttcgatttca tctacaaatt cacagcctcc ataatatctc ttacctggat
    16501 aaccttctgc atatttgtta gttaaaacac ttcccattac ttccattact tcaggcaaag
    16561 tgaaattctc acttgctatc atttcaagac cttcgcactg gcgcactaac tcttggttag
    16621 ttaaatcaaa aatttcctta tcaaactgct ctaaactcat tctttatcct cctttaattc
    16681 tgatttcaat ggcctcatag ctggaaacaa tatcacatct cgaatagatt ttttatttgt
    16741 taaaagcatc accaatctat ctattcctat accttgtcct gctgttggtg gcataccata
    16801 tcctagagca tttacaaaat cttcatccat ttcacacgct tcttcatcac ctgcattttt
    16861 agcctcaatt tgttttaaaa atctttcata ttgatctaaa ggatcattta attcgttaaa
    16921 accattggct aattctctac cacacacaaa aagctcaaag cgctctgcta tctcagaatt
    16981 tttgtcacta cgacgagaaa gtgggctaat agatattgga aaatctgtga taaaagtagg
    17041 atcaataagt ttactttcta cataattatc gaaaagctcg gcttgcaaat gccctaagtc
    17101 aagcttatca tttgcttcaa agccatcttt ttttaatttc tctaaaatct tatctttatt
    17161 ttcaataatt tcatcgctta aagcaccata ctttttaagc gcatctttat aagtaattct
    17221 ctcaaaaggt ttggaaaaat cgattttttg tccatcaaat tctatgattt ttcctaattg
    17281 caatttttct aaaagcaagg caaaaagttc ttcagtaaga tccattaaat ctttataatt
    17341 atgataagcc caataaaact caattgtagt aaattcaggg ttatgagtaa gatccattcc
    17401 ttcatttcta aaacaacgat tgatttcaaa aactgcctca aaaccaccca ctacaagtct
    17461 ttttaaataa agctcaggtg caattcttaa aaatctctca acccctaaag aattatgaaa
    17521 agttacaaaa ggtttagcat ttgcaccacc tgcaatgggg tgcatcatag gagtttcaac
    17581 ctctaaaaag cctttttctt caaaaaaatg acgaatcaaa cttacaactt tagaacgagt
    17641 cagaaaatct tttctaacct ctgcattcat aatcatatct acataacgct tacgatatct
    17701 ttgttctata tctgtaagtc catggtattt ttcaggcaaa ggtactattg atttagttgc
    17761 taaagtgatc tcacttgcgt gcaagctaaa ctctcccgtt ttagtaacaa aagggaagcc
    17821 ttttgcaagg atgatatcac ccacttcaag attttttttg aataaattaa atttttcctc
    17881 acctaaagaa tctttactaa aataaatttg caaattctca ttctcatctt ctatattagc
    17941 aaatatagat ttaccagcaa ttctaagaag ctttaagcgt ccagaaatga cagaagagat
    18001 actttcatcg cgtttatttt cagtatcaaa aatatagcta aatttctttt taaaatctgc
    18061 tagagaaagt tctttaacta aaaaatgtgg ataaggattt actcctgcgt ttttaagctc
    18121 attagccttt tgaattcttt gttgttctaa aatattgtca aacattaaat ttttacctta
    18181 gctttttgat tacaattatt acacacacca taaagttgca ttaaatgtcc cgtaagttta
    18241 aatccatgct ctttagcaat caaggcttgc tgtctttcaa tgataggatt ttcaaattct
    18301 ataatttttc cacaattttt acaaatcata tgatcatggt gtggtttatt ggcaagctcg
    18361 tatttttttc cagccgaacc aaatgatata gaagtaacca tttctgcttc ttcaagcaaa
    18421 tttaaagtcc tataaaccgt agcaatacct acattcaaat ccggttctgc ttgtttaatc
    18481 tccatatata aactttcagg agtataatgt gtatcactat gatataaggt tttgagtaag
    18541 atttctcttt gtttggtata tttaagacca ccttgtcgta aaattttctt aaatctttct
    18601 agtaatacat cgtattctac attctcaatc aacatatttt attctccttg agtagtactt
    18661 aaatcatctc taatatcttg caaattttga tcaatttgac ccaaactact tgttgttaga
    18721 gactgattca ttataaatga tcctatattt ttaagaggag ttaaagtaaa actattttgg
    18781 gcaaattgat ttaatttatc atttaaaaaa tcaatacgcg ccacacaaaa aactaaaatt
    18841 gcaaaaatta aaaatacttt tgcacctcca aaaataaacc ctcccaaacg atctaaaaat
    18901 cccaaaccgc ttaatttaac caatttagaa ataaaattgc caagcacgag acaaattatc
    18961 caaaaaataa ttaaaattgc taaaaatcct gcaaaattag ccaaactttg attttctatc
    19021 ttatagaaag tattttgaat aaattctgca gcttgcgaag cgtattttga agcaataaaa
    19081 acaccaccga taatcccgag caaaccaaat acttctttaa tcaaaccact tacaataccc
    19141 ttaagaccta aaagtagagt aaaacctaaa ataaaagcat caaaccagta aaattccata
    19201 ttttaattca ccttaccaaa gcatttaaaa atcacttaaa attataaatt atataaacaa
    19261 gaactaaaca ctagattaat cactcaatga ttttaggaac aatgaaaaaa tgatcattgc
    19321 tttttggggc atgatttaaa accgtttcta ctacattgct actattaaca ctatcacttc
    19381 taaaaggtgc tccaccttta atggtgctga ttgtaacttc tgaagaactt aaatctaatt
    19441 catttaactt ctcaacaaaa ttcacaatct cactaagttc gcaaatcact tcacttcttt
    19501 tttcttcttc aatttgtaaa gcacttagtt tttcaagctt gctaagcaat ttttcatcta
    19561 tttgcatctt aaaccttact aaaataaagt caatttttaa aattatatca taaaaagctt
    19621 taaattgttt aggatatttt gtaatttata tgatacaata ctgcagtttt ttaaaattaa
    19681 aaattacaag gataaatttt gggattaaaa gataatttaa aagccgtaaa agcagaaatc
    19741 aataccgaag aacaattcat tgaaaatttt atcaaaggtg agagatttat aaaaaaatat
    19801 aaattatata tatttgcact tatagcaatt ttgattattt ggtttactat aagctttatc
    19861 agtggtaaaa tcgaacaata caatatcgaa gaaagcaata aaatttacac aagtttatta
    19921 aacaacccaa acgatcaagc acttcttgaa caacttaaaa ataaaaatgc taatctttat
    19981 gcaatttttc taatgaaaga attagcaaaa gatatcaaca ataccgagat taaaagtcag
    20041 ttgcaaagct taagtagcaa ttctgatgca aatcatttgc ttaaaaatat tatttctctt
    20101 cctctaggag aaaaatcgat atttttaaaa aattacgata aaattttaca agcttataga
    20161 cttttaggag agggaaaaat cgaacaagct aatattttac tttctcaaat taaagatgac
    20221 tcagccctaa gccagattgc taaaaatcta aaacactatc aaggcatttc ccgatgagac
    20281 agtttttttt aatctcattt tgtcttattt ttctttgcgc ttgtggaact aaaagacaat
    20341 actttgaacc ttcacaaacc gatggaaagc taagttctaa cgatagctta aaatctagta
    20401 ttgtggattg gaatacaatt tcggcaaaac tcaaaaacaa tcaagtaatt ttaaaaaatg
    20461 atgcaataat tgaagatttt aaactagata agggctatat acttttagca tatcaagagg
    20521 gtgaatttat cgaagcagat gataatggaa atttaaaaat ttacaatagt tctcatgatg
    20581 aagtttattc ttacaaattt gatgctgcag ttcttggagt agctttacat ggagatgatt
    20641 tagcacttgt tttagcaaac aatagcattg ttttagccaa tcgctctcta ggtataaaat
    20701 tcagccaaaa cctaacacct gcacccgcac aagatagtcg cgttgcaaat cctatctttt
    20761 tagacaatat cattatttat ccaactttag atgggaaaat tacaatcgta tcaaaaaata
    20821 cttttgaagt tgtcaaagat gttgtgattt cagcagaaag tttttttaac aatgtcattc
    20881 accttgatat aaatgatgat aaaatgatag ctgcaacagc taaaaaagtt atagtagtaa
    20941 gccctgctag aactctttac ttggatgctg atattaaaga tattgcacta gatagcaatg
    21001 cgctatttat attagaaaaa aatggcaaca tcataaaaac agactataat ctaagaaaaa
    21061 tcacagagaa aaaatttgat tttgctatct ttacaaaagt tagcatacac aatgaccatc
    21121 tttacgcttt tgagaaaaca ggctatttaa tcaaatgtga tctcaatctt gaaaatattc
    21181 aaatctttga acttccaaac gcagttgaaa aaatatcttt tataggcaat ggaaagtttt
    21241 attatggaga taaaatttta gatttattat gaatatttta aatgaagcaa tgaaggtttt
    21301 aaagctgaat ttaaaacctt ttgatttaac aaatttaaca aaaaagaaaa cttatctttg
    21361 tgctttgaat gatgaaaatt tacttttaat atacacagga aaagcaagat ttatcaacaa
    21421 agatgctata tttataaaca acttagccaa tgattttgat ctaaaataca aatatttttt
    21481 tactaaaagc cctctgtgct caaaggcaaa acattacctt gaagaaaaag gatttcatat
    21541 tcatgctatt ttgtgatatt ggcaattcca atgctagttt tttagatgat aataaatttt
    21601 ttacccttaa tatagaacaa tttttagaat ttaaaagtga acaaaaaatt ttttatatca
    21661 atgttaatga gcacattaaa gaacatttaa aagcacgcaa aaactttata aatcttgagc
    21721 cttattttgt atttgatacc atttatcaag gcttgggtgt agatcgaatc gcagcttgtt
    21781 acactataga agatggagtt gtggtagatg ctggcagtgc aattacggta gatatagtat
    21841 caaattccat acatttagga ggtttcatct taccgggtat tgctaattat agaaaaattt
    21901 atgctcatat ttctcctaga ttaaaacatg agtttaatac ccaaatcagt cttgatgcct
    21961 tcccgcaaaa aacaagcgat gctctaagtt atggagtgtt taaaagtatt tatttgctta
    22021 taaaagatgc tgcgcaaaat aaaaaacttt attttacagg tggagatggg cagtttttag
    22081 caaattattt tgattatgct atttacgata aacttctcat ctttagagga atgaagaaga
    22141 ttatacaaga aaatccgaat ctactttttt aatttgtaat gttacaaaaa ttctcattct
    22201 gtatattctt caatcaaatt taacttttta taaaataaat tggattacac ttttatttag
    22261 aaaaattaac tttactagaa gcaaaaaaag gaaaaaaaat gactcaacaa gaattcgatg
    22321 taattgtcat cggagcagga atttctggag cagctctatt ttacgagctt gcaagatata
    22381 ctgatattaa aaatattgct ttaatagaaa aatatcatgc tcctgcaaca ttaaattcta
    22441 aaggaacaag caattctcaa actattcatt gtggagatat cgaaacaaac tatactctag
    22501 aaaaagctaa aaaagttaaa agaactgctg atatgatagt aaaatacggg cttttgcaaa
    22561 atgctcaaaa tcaatttatg ttttctcatc aaaaaatggc cttggctgtt ggtgattcag
    22621 aatgcgaata catgaaaaaa cgccatgaag aatttggcga actttatcct tatatgaaat
    22681 tttttaataa agataaaatt aaacaaattg agcctaaagt agctcttgga gaaaatggca
    22741 gagatgatag acctgaaaat atctgtgcta tgggagtcga agctggagaa gtttttacta
    22801 cagtagattt tggaaaaatg agtgcaagtt tggttgaaca aggacaaaaa caaggcaaaa
    22861 atacctttgt agctttcaat caagaaattg ttcatataga gaaaaaagat gatattttta
    22921 tcttgaaaac aaacacttat caagaatacc gttctaaggc tgtagttgta aatgctggtg
    22981 cacattcttt gtatctagca cataaaatga atttgggtat ggataaatct tgttggcctg
    23041 tagcgggaag cttttattta accaaacaaa aactactcaa tggtaaagtc tatatggtac
    23101 aaaatccaaa actacctttt gcagctcttc atggagatcc tgacttgctt gcagatatga
    23161 atactcgttt tggccctact gccctagtta ttccaaaact tgaacgctac catggtttaa
    23221 aatctgtccc tgaattcttt gaagccttaa aacttgacaa aaccgtctta aaggttactt
    23281 ttagtatgtt taaagatcca acgattagaa attatatact ttataactat ctttttgaat
    23341 taccttttat tgataaaggt ttatttgtaa aagatgccaa aaaaatagtc cctagcttaa
    23401 aaacaagtga tatttattat gcaaaaggct ttgggggagt gcgtcctcaa gtcattgata
    23461 aaactagagg agaattaatg ctaggtgaag caagcattac cgaaactccc ggaattattt
    23521 ttaatatgac tccaagtcct ggagcaacaa gctgtttagg caatgctgaa agagatgcta
    23581 agcttatgtg cgagtattta ggagctaaat ttgatgagga taaatttgct tcagaattat
    23641 tgtagtcttt ttgtttccaa agtttgatta taattaaaca aaaaaaggag aacagcgtgc
    23701 taaaaaaaac taaaattgta gctacagttg ggccagcaag cgaaaaggaa gatgttttac
    23761 gccagatgat aatcaatggc gtaaatgttt ttcgtttaaa tttctctcat ggaacacatg
    23821 aataccacaa aaacaatctt gaaaccatac gcaaagtttc aagagaactt aacactcgcg
    23881 taggaatttt acaagatata agcgggccaa aaattcgcac aggagagctg aaaactcctt
    23941 ttgagcttaa aaaaggtgat agacttgatt tttattatga aaaaatcata ggcgaacaaa
    24001 ttgctccaaa tcattataaa cttagcatca atcaaagcga aattttaaat atgctaaaat
    24061 tagacgaata tgtctattta tatgatggtt caatcagggc aaaagtgact gctaaagata
    24121 gtgaaaaaat tgaaactctc atagaaaatg atggtttttt aaattcaaac aagggtatta
    24181 attttccaaa tactaaaatc aatattgatg ttatcacaca aaaagataaa aaagacttac
    24241 tttggggtat agaaaatgaa gtagatttcc tagctatttc ttttgttcaa aatgctcatg
    24301 atattgatga agttcgtgaa attttagctc aaaataatgc taaaatttct atatttgcaa
    24361 aaatagaaaa atttgacgca gttgaaaata tagatgaaat tatagcatct agtgatggta
    24421 taatggtcgc gcgtggagat cttggtatag aagttcctta ctataaagta cctaatatac
    24481 aaaaagcaat tattcacaaa gccaataatg cttcaaaacc tgttataaca gctacacaaa
    24541 tgcttttttc tcttgcaaaa agcaaaactg ctacaagagc cgaaatttca gatgttgcta
    24601 atgctgtttt agatgggaca gatgctgtaa tgcttagcga agaaagtgcg gtaggtatag
    24661 atccagccaa tgcagttgat gtcatgtgtc aaaccatcat agaaactgaa aagcgctatc
    24721 cttataacaa atttaatgaa tttgaaaatc ttgacaatac agataaaatc atgcgctctt
    24781 cagcccatct tgcaacagat cttaatgctg atgctatttt ttccttgact agtagtggaa
    24841 aatccgctat taaaatttca agatatcgtc cagatatgga gattatagca gtggctcatt
    24901 ctgaaaaaac attgaattct ttaagtatag tttggggtgt caatcctgcc attttggtta
    24961 acaaaagcga ggatttaacg gatttactta gagattctgt aaaatctagc gttgaaaaag
    25021 gttttatgaa taaagagaag tgctatttgc tcactgcagg ctttccaact ggagtagaag
    25081 gcacaagcaa tcttatacgc atacttgcaa aagagcaaat tgcttactat cttaaataga
    25141 cttaaatttt taagtctatt taaatccact tctaaaattt aattaaaaat agtcgatata
    25201 caattagcct cattataaaa aggagcagaa atgcaaatca atactttttc aaatgtcgct
    25261 agtatggcac aagctcaagt tagcaataag aaggcagatg gtaacgctac agagaataca
    25321 aaagacacaa atgttcaaag tgccaattca aatcaagata tcctagacaa actcaatgca
    25381 cttggcggta agggtattag tcaaatttat cttgtgcaat ttcagcaaca aaccatgagt
    25441 actgttttaa acacaagcaa tgctcaagct ggaattaatg atcttttggg aggcaatgat
    25501 ttaaattctg taaagtctat gctttcagat attgactttg cgtctttagg ttataatgga
    25561 aaaaatccac ttacaatgaa tactgatgaa ctcaatcagc tcatcagtga agagggattt
    25621 tttggtattg acaatacagc aaatcgcatt gctgattttg tcatcaaagg tgctggaaac
    25681 gatgttgaaa agcttaaaaa gggactagaa ggtataaaac aagggtttga gcaagcagaa
    25741 aaaatttggg gcggagagct tcctcaaatc agccaagata caatcgaagc tacaataaaa
    25801 aaagttagcg atcgtatcga tgaacttggt ggaaaaactt tagaccttaa agcatgacaa
    25861 aggtgtttgg actataccaa gcaccttatt gatttttaat atcaaaagta aaaaattcac
    25921 tcttaaaatc attaggcaaa gttctatact gcgtcattgc cgcttcgtaa ttacctactt
    25981 cttgataaag caaacctaaa gctaccttac tttctttatt attcttatct gtgagttttg
    26041 aaagttgcaa aagagcaatg gctgagtttg gattattcgc acccacagca gctacagaag
    26101 ctaaaaacaa agtcctagaa tcctttgctc catattcatc gattagagta ttatacaaag
    26161 cataagattc ctcatactgc tgcgcaaaaa tatccaaata agctaaagtt tgtatcatac
    26221 cctcatcttt aaccttagag gtattaatca aggttttaaa tttttgtctt tctaaattta
    26281 acaatcctgc aatatgcatt aaattaacat acaattccct agcaatattt gaacctccaa
    26341 aaacactgcg gtaatcaact tgtaaattct taaaatgaat ttgggcattt tgagcatatt
    26401 ctttaatatt caaattcgaa tttaaagaat taaaatacaa aatatttgcc acaatatctt
    26461 gcggaagttc tgatcttaat ttggcaattc ttacatctac ttgattgtta agattattat
    26521 tttttgcaat aatagtttca aaaataagat ttaagggtgt tttttgtcca ttctcatcca
    26581 aataaggcaa catagaaata taatcaccat tagctaaaaa tagcatattt ttttgcatat
    26641 tggctttaaa atttgaatct gctgcaatat tatcaagaat ttcatgataa agtttggttg
    26701 tatcattatc acttaatttt ccgcaaaaca tcgcaaaagc accggctaaa taatttttag
    26761 gatttaaatg ataagagcta gaaaaatgct tataagcaag ttcataattt tgcatttgtg
    26821 cataagttaa agcaagattg tattgtaaaa tactatgttc aggataatct tccaataaag
    26881 cttggaattc tttatttgca agtcttaatt tttgatttaa tgcatcattg ataatgttag
    26941 aaatttttac attagttgaa gataaggctt gactcctagc caaatagctt tgaccatctg
    27001 aactatcatc tataaaattt gtaatattgg ctttttttat ataaagtgat gcttgttttg
    27061 agtcaaaaac ttgataaggc gcaaaataaa aaagtaaatc aaactgatct ttttgttttt
    27121 ttaggatgtc attggaaaaa tttctctgcg ctatggctat attgaagagt tctttattta
    27181 aacgaacttt gatcttatat ctatctaaaa ttttatactt atcttcatca tttctatatg
    27241 tatcctgcaa acgcaataac atatcttgaa aatctcctgt tttaatatca actaaagtta
    27301 aagctgaaag actttgattg aaatctcttt cgatcttcat tgcagtattt aaggctattt
    27361 tagccttatc gtattctccc attcttgcat ataaaagtcc caaagaaagg ctaggttcaa
    27421 aacttccttg agtatttaat tgttgaacag attttgcatc aaaatccatc tttgcataaa
    27481 ttttagcgga taaatattta gctacatctg tgtaaggttc cgaatttacg cgttgaagca
    27541 tttgcaaagc ttcgggataa taacccttat aataattaat taaagccaaa taataatcat
    27601 acaatttaga ttttccttct ttaggaagat aaacttgcgc taaatctata taatatttaa
    27661 atttttcctt atcattaagc tttaaagcgc aaacagcagc attaatagct gccacacttt
    27721 gattttctcc attagctatt gcctttttaa aactatcaaa ggcttcatca aatttaccct
    27781 cattcatttg agaaacccct aggttataat tagacaaaga ttcattataa acggcaattt
    27841 gctcataaac cttcaaagct tgctccactt caccctttaa ataaagcgca tttgcctttt
    27901 gtatcatccc atcaactctt gtcatatcat tataattata ggattcatca ggcataacca
    27961 caggctgttc aataggcttt gatgcgataa tatcgggctt aaccttccct tcattaaaag
    28021 ttaaataaaa taaagtaaat accaaaatac aaatgattcc caaagacaag cccacaagag
    28081 acataaattt acgatcttta taccacggag taggctcatc ttctttcacc tcttcaaaag
    28141 tcgatgattc ctccggtgcg ctttctcttg taaatttaaa accgccatca ctattttccc
    28201 taggcaattc ctctggtaaa gatgcaaatt cttcatcctc aggagcctga ccttcctgcc
    28261 ctttaaattc acccaaactt tcatcaagtc ttggttcatt taaagtatct tcgggttttt
    28321 caagaactat atcttcttta tctgccattt atactcttta aaaatatttt ttcaatacat
    28381 caggaatttg aattctaccc tctttatctt gataattttc cataatagca accaaagttc
    28441 tacctactgc taaagaagag ccatttaaag tatgaactaa ttcatttttc cctttttcat
    28501 ttttatagcg aatttttgca cgccttgctt gaaaatcacg acaattagaa acagaactga
    28561 tttcgcgata tttattttgc gatggtatcc atacctcaag atctatagtc tttgccgcgc
    28621 taaaacctag atctccggta caaagcatca aatgtctatg agctaaacct aaagagctga
    28681 gtaaatcact tgcacattct accatttcat taaaaatact gtcactttgt tcaggtttgg
    28741 taatgctcac aagctctact ttttcaaatt gatgctgacg gataatgcct cttgtgtcac
    28801 gccctgcact tcctgcttct tttctaaaac aagcactata gcaagtcatt ttaataggca
    28861 aactttcact cgttaaaatt tctccactat aaagatttgt cacaggaatt tcagaagttg
    28921 agattaaata caaatcctca tcctctatct tatacatatc atctttaaat ttaggaagct
    28981 gtcctgtgcc aaacatcgta ggactattta ccaaaaaagg cacatttaca aattcaaacc
    29041 cacgacttcg gttaaaatct atcatataat ttaccaaagc acggcttagc aaagctcctt
    29101 catttttaag cacacaaaaa cggctttgtg aaatttttac ccctcgcaca aaatcaagcc
    29161 agtttaaact ctctcctaaa tcatggtgtt cttttggagt aaaatcaaat tgagggggtg
    29221 ttaaaacttt ttttatttca acattttctt cctcatcttc acccacagga acgcattcat
    29281 cagggatatt tggaatagca tgagcaatgg tttctaactc attttccaaa gcatttactt
    29341 ttgcattttg ctcattgatt ttaattttat tttcactgag ttttgccttc aaactttcct
    29401 tatcttctac agtggctagt tctttactga atttattctg aaaagcttga aattcttcca
    29461 aactcgcttt ttcttttttc aaatttgtaa aaagctcggc aagatttttt aatatatttt
    29521 catctacttt tttattttgt agctttttag ccacctcatc gaaattattt tgtaaatttt
    29581 tcaaatcaag catttttact ccttaaagtc ctattttttc ataaattttt tgcatttttt
    29641 cttgagcaat tttcctagcc ttgcttgcac ccaattctaa aatttctttt aaatgcgaag
    29701 gcttttctaa aagctcattg tatttttctc ttgcttcttt aaaataagca tttacaagct
    29761 cgtttaaata cattttaaaa tgtccataac cctcaccacc tttttcatag cgtatttgca
    29821 attctttttg ccctgattca tctaaaaaaa gctttgcgat tttaaaaaca ttgcagcttt
    29881 taaaatcttt tggatcttct aaagcggtac tatcggttac tatggaagaa atttgttttt
    29941 ttaaggtttt ttcactgcta aaaatatcta tagtattttg ataagattta ctcatttttg
    30001 ctccatcagt acccacaact acagctactt cttcatttat cttggcttcg ggcaaggtaa
    30061 aaatttcacc ccattcatta tttactttta aggcaatatc gcgagctatt tcaacatgct
    30121 gaatttgatc cttacctact ggcacaagtt gagtatcgaa aagcaaaata tctgctgcca
    30181 ttaaaacagg gtaagaaaaa agtccgtgtg aagcactaag ccccttagca actttatcct
    30241 tgtaactatg cgcacgctct aataaaccca taggagtaaa ttgcgataaa atccaataaa
    30301 gctccataac ttccttaaca tcactttgca accaaaaaac gcttttttga ggatctatac
    30361 caaggcttaa aaaagccgca gcagctttga gtgaattttg ctctaatttc tttccatctt
    30421 gacttgaagt catagcatga taatttgcta taaacataaa catttcactt ttttcttgag
    30481 cctccaccat ttgccttata gcaccaaaat aattacctat gtgcaaatct ccacttggct
    30541 gaagtcctgt taatactctc attttatcac cttttttatt tctatcacaa gctcatcaat
    30601 gcttttattt tcaacatcta aaatcaaatt cgctttttgc tcgtatttat ttagacgctc
    30661 attatataat ctttttgctt gaacttcatc ataaaataaa ggtcttttag caatttcatt
    30721 ctcgcttaaa cgctttttta gatattcaaa acttgctttt aaataaatac aaaaacctat
    30781 tttatcaaaa tccaaaacat gtataaaacc tccgccacta gctatagaag ctccattaca
    30841 agagcaaaga aaatttgcta ctttttgctc ttcttgtcta aaaaaagcct cgcccttttc
    30901 tttaaaaatt tcactgattt tttgatcaaa tttcatctca atcaaaccat cactatctaa
    30961 aaaaacaaga tctaaatcct tagccaaagc tctagctata gtactttttc cactacccat
    31021 aaaaccaata aaaataatat ttttaacttt catcattttc cttgcttcct tttttgcgcg
    31081 aagcaatgac taaaggaaca ccttcaaagt taaattcttt tctgatttga ttttgtaaat
    31141 aacgcttata actaaaatgc aaagccttag gtctattcat aataagtgcg attttaggag
    31201 gtgctaaatc atactgcact gcataataaa tttttaccaa ttttccataa tcatgcggta
    31261 aaggatgagc cttagtcgca cttgcgatta aatcattaag ttttgaggtt ggaatttttt
    31321 gtgtaaaatt agtaaagact tctaaaattt tttctaataa aacatgtact ctttttccac
    31381 tcaaagcaga aacactgaca acgggcgcat aagctaaaaa tttaaagcga tcaagtttta
    31441 attcctttac cactttatca aattcaaatt cagttttatc ccatttattt aatacaataa
    31501 tcacgcccaa ataatgcttt gctgcaagtc cagctatcct ttcatcaagc tcgttaaaac
    31561 cttcattggc atctaaaacc aaaagtgcga tttgagaatt agataaaatc ttttctgtgc
    31621 ggtttaatgc aaaacgctca agcccttgaa ttttacctcg ctttctaata cctgcagtat
    31681 caacaaattc tatcacttta tccttataaa ctatgctttc attaacagga tcaattgtcg
    31741 ttcccgcaat agaactcacc acactgcgct cttgttttac caaagcattt aaaaggcttg
    31801 actttccgac attaacacgc cctactatac ccactctgat ataattttga tcgagttctt
    31861 taaactgaaa ttcttttccc tcttcataat gttctaaaaa atcttctaaa ttttcttcct
    31921 catcagggat taaaaattgt tcatctaaaa agttctcaag ccaattataa agctcatcta
    31981 gccctatatt atgagtaaca gaaagattaa aaacctcttt tacaccaaaa ttagcaaatt
    32041 cccacgatct ttcttcatct tttttattat ccactttgtt gattactaga gcaataggct
    32101 ttcctaattt ttttaaagaa tgaaaaaatt gcctatcttc atcatcggga cttagttttc
    32161 catcaaccaa ataaaggata atatcacttt gttttgcaat ttttagagtg ttttttttaa
    32221 catttttaaa aagctcattg ctttcatcaa gaccaccact atcaatcaat agggcttttt
    32281 tcgaatttat aaaaacttct gttttattgg tatctcttgt agtacctgaa atttcacttg
    32341 taatagctat tctttgcctt gccattctgt taaataaact tgattttcca acatttggct
    32401 tacctataag tatgatgctt tgcatttgtt tacctaataa aaatttttaa tgtatatttt
    32461 tttaaaaaat tatataaaat ttgccttaat attaagcaaa aaaagactag aattaaccat
    32521 aatttaatca aggaaaaaag atgctaaaag tcatcaaaca taatttagga atttatttta
    32581 tgattttagc gtgcttagat tttgcactta tgggagcttg tgcgaaaatt cttagcaaag
    32641 aaatgagttc gattgaaatt atgtttttta gaaatatcat cggcgtattg tttatagttt
    32701 atctactaaa acgctcaaaa gttcacaaag aaggaggaca tttttggctt ttagtctttc
    32761 gcggggtaac aggaacactt tcgctttata tgttttttta caatgtttca aatattaccc
    32821 tagggggtgc ttttgctttt caaaaaactg ctccaatttt catcacttta atagctttta
    32881 ttatttttaa agaaaatatc ggagccaagg gatggctggg gattttaatc gcatttagcg
    32941 gggtgctttt aattgcgcaa ccttgggcgg atagttcaac tcattcgggt tttgatttaa
    33001 aaaattctat cataggtgtt atgagtggat ttttagcagc cttggctctt acaagtgtaa
    33061 gagagcttag aaaattttac actacagaac aaattgcatt ttcttttatc cttttggggg
    33121 ctttaatgcc tttaatctct atgataggtg ctgaattttt tgagccaaaa catcttgatt
    33181 ctttgcattt ggattttatt ttagcacctt ttgtcatgcc tagccttaca gcttggctta
    33241 tcattgctgt catgggagcc ttgggcacta tttatcaaat tcatgtaacc aaagcttatg
    33301 gcatagccaa acaagcaggt gttgtagcag gtgtaagcta tcttgatgta gtctttagta
    33361 tggtagtggg tataattttg ggtgatgatt taccaagtgc tatggttttt ttaggtataa
    33421 taggcattat ttttggtgga ataattttgg ttaaaaacaa aggaaaaaaa tgaaaaaaat
    33481 gatactcatt gccggtcctt gcgtcattga aaataaggat ttggttttta aagtagcaca
    33541 gaatttacaa gaatttaatg aaaatgaaaa tatagaattt tattttaaat caagctttga
    33601 caaagcaaat cgtacaagta ttaattcttt tagaggccct ggtcttgaag aaggattgaa
    33661 agttttacaa agtgtaaaaa atgaattcgg tatgaaaatc ttaactgaca tacacgaaag
    33721 cacgcaagca gcacccgtaa gcgaggtggt tgatgtttta caaattcctg cttttttatg
    33781 cagacaaact gatctgctag tcgcagcagc caaaacaaag gcgaaagtaa atattaaaaa
    33841 agggcaattt cttaacccaa gcgatattaa atacagtgtc aaaaaagtac ttcaaacacg
    33901 cggtatagaa gaagaaggct atgaagtagc tgataaaaat ggtatttttg tagctgaaag
    33961 aggagctagc tttggctatg gaaatttagt cgtggatatg agatctttgg ttatcatgcg
    34021 tgaatttgct cctgttatat ttgacgctac tcatagtgtg caaatgccag gagctgcagg
    34081 gggaagtagt ggaggaaaaa gcgaatttgt agagccttta gcaagagcag cagcagctgt
    34141 aggagtagat ggctttttct ttgaaacaca tactaatcct tgcgaagctt tatgcgatgg
    34201 gcctaatatg cttgatctta atcgtcttaa agcttgtgta aaaacacttt tagaaattca
    34261 aaatatcatt gaaggaaaat aatatgacta tcattgaagg aaaattaaat ttagactcaa
    34321 atacaaaaat tgctatcatc aatgcaagat ttaatcacat catcaccgat cgccttgtag
    34381 aaggtgcaag agatgctttt ttaagacatg gtggcaaaga agaaaatctt agccttatac
    34441 ttgttccagg cgcttttgaa cttccttttg ctttaaaaaa agctatagaa agtaaaaaat
    34501 ttgatgcgat ttgttgtgtg ggtgcggtca ttcgtggctc aactccgcat tttgattatg
    34561 tttcggcaga aaccactaag ggcattgcca atgtaagttt aaaccacaat atccctgtaa
    34621 gctttggagt tttaacaact gatactatag aacaagccat agaaagagca ggaagcaaag
    34681 caggaaataa aggctttgaa gcaatgacaa ctgttattga aatgctaaat ttaagcaagg
    34741 aattttaatg gcaacgcgtc accaagtaag acaaagtgtg atttctttgc tttatgccct
    34801 agaaatgaat gaaaaaaatg aaaattttat tgatgaattt ctcaatgaaa aaaaaatccg
    34861 caacgagcaa aaaaatttca cactgagttt atacgaagga attataaaaa atcttgatga
    34921 tatagataag aatttaaacc cctaccttaa cgaaaatgaa attgaaaaat taggacatat
    34981 cgaaagagcc atactgcgac ttggtgccta tgaattgctt tttacagaca cgcctaatgc
    35041 catagtgatt aatgaagcta tagaacttgc taaagaactt gctaatgata attctccaaa
    35101 atttatcaat ggggttttag atactcttgt taaggcaaaa caatgaaact ctgcgtagct
    35161 cttgatcttg ccaccaaaga agagtgctta aggcttgcta aagaattaaa aggtttagat
    35221 ctttggctaa aagtgggttt aagagcctat ttaagagatg gctttaaatt catagaagaa
    35281 cttaaaaaaa tcgatgaata taaaattttt ctcgatctta aaattcatga tattcctaat
    35341 accatggcag atgcttgcga ggaaatttca aaacttggcg ttgatatgat taatatccat
    35401 gcaagtgctg gaaaagtcgc tatgcaagaa gtgatgtcta gactcaatcg cttcaataaa
    35461 agacccttgg tgttagcagt ttcagcactt actagctttg atgaagaaaa tttttacagc
    35521 atttataagc aaaacatcga tgaagctgtg attcattttt caaaaatgtc ttatcaaaat
    35581 ggacttgatg gtatggtatg ttcggttttt gaaagtaaaa aaattaaaga acatacaaat
    35641 tcaaatttct taaccctcac tcctggaatt cgtccttttg gggaagcaag tgatgatcaa
    35701 aaacgcgttg ctaatcttac aatggctaga gaaaatttaa gtgattatat cgttgtggga
    35761 agacctatat ataaaaatga aaatcctaga gctgtatgtg aaaaaatttt agacaaaata
    35821 cacagaaaaa atataagcga aaatgatata gagcaaaatt atgaagcaat gcagcaaaaa
    35881 gaatgggata tgtgcaatca ttttgaagaa tggatcaaaa ctcagcctga taaagaacaa
    35941 gctttgaaag aattttatac taagtgcggg ataaaatatt gaattatcag caattagaat
    36001 gtgattattt taatctttat aatcaattta ttagcgtaga ttttcaaatt tcattatttg
    36061 aaaaaaatca taaaagcttg attaaagatt ttatattttt ttatcatcaa attttaaaac
    36121 aaaaagactt aaatttttta ctcggagtga gaaacaaaat tgctcttaaa gttcataatt
    36181 atatgcaaga atactccact tctccaaaag atttgagtct tatttgctta agagaacaca
    36241 aacatattga attttttcag agattttata aagccttggc ttattttgta gcctttagaa
    36301 aaaaacttga tgaagagcaa aaaattaaaa atttgatttc aaatatccac gaatactttg
    36361 gctgtcattt tatcaattct gactttaaca atttacaaaa ttttcaaaaa aatgatttct
    36421 ttacactgcc tgaaaaatgt cttcaatatt ttcatcttgc tatgattcat ctttgtttta
    36481 tggttttaaa tcctttaaat tttaaggatt ctaatcgaca ccttgataaa gcaattaact
    36541 atcttatcga tggaactttt gaaatttatg agctcatctt taaagaatat tttctattat
    36601 ttccaaagga tgaagagctt aaagatgaac ttaaaaaaat aaaaaattta gaatttaaaa
    36661 ttctaatgca agaagtttca agagttaaac tactcaatca ttataaagaa ttttgtgaag
    36721 aaatatttta caatatagag cttgaaaaaa tcatataaaa ttaatcctat attaacattg
    36781 ttatagttta ataataaaaa tttttaataa ggaaaaatta tgattgtaac gcctgagaaa
    36841 ctttataaac aaagaagaga tttttttaaa cttggagcag gagctttaat cggctcttct
    36901 ttaattgttt ccaaactttc tgctttaaat tttataaatg atacaaatgc aaataaactt
    36961 gaaattagca atgaagaact tgcaacaaac tatatcaatt tttatgaatt ttcaacggat
    37021 aaaagaaagg cagtatcttt agcgcaaaat tttaatactc aaaattggaa aatcgatata
    37081 agcggggaaa tagaaaagcc tttcactctt agcatggagg atattttaaa atttccttta
    37141 gaagaaagaa tttatcgttt tcgctgtgtt gaaacttggt ctatggtagt gccttgggtg
    37201 ggttttgaac tacgccgttt aatcgatatg gcaaaaccaa ctagcgaggc aaaattcatt
    37261 aaatttacca ctcttttgga taaaaaccaa ttccccgatc aagatgcttt gtttccaact
    37321 gttgagtatc cttatgtgga aggcttacgt atggatgagg ctatgcatcc actcactcta
    37381 cttgcagtgg gtatgtataa aaaggcttta aaaccacaaa atggagcacc aatccgcctt
    37441 gttgtacctt ggaaatatgg atttaaaagt attaaatcca tagttaaaat cgaatttgta
    37501 aaagagcagc ctattggcac ttgggaaaaa tatgctccaa atgaatatgg cttttatgcc
    37561 aatgtcaacc ctaatgtatc ccatcctaga tggtcgcaag ctaacgaaag ggctttagga
    37621 gactttttta ccaaacctac tttaatgttt aatggctatg aaaaagaagt agcaagtctt
    37681 tatgcgggca tggatttaaa ggcaaattat taatgcgcac taaatacttt aaatttcttg
    37741 cctattttgc ttttttagca agcttgattt atggctttta tcatatatta aaagcctttg
    37801 attttgtcaa agaggcttat atttatacag gagtttttgc tttatttttt ttaaatttaa
    37861 gccttttgtt ttctttatgc aaatttaaaa aaaccaaaag ctatcctaag ctactaggaa
    37921 tatttgctgc attttgggca tttttacatt ttttaaatta ttttatcttt gatagaaatg
    37981 caaatttttt aagacttttt gatgatatct ctcatcgttt attggaagcg agtggttttt
    38041 ttgcttttat catcatcttt tttatgtttt taagctcttt tagatttttt aaaagaattg
    38101 aaaagataag aaagttaggt tatgtatgct tggttttagc aagttatcat tattttttaa
    38161 gccctaaagt tcctatgttt tgggaatgga gtgctttgat gcttagcctt gtttatttta
    38221 tgatacgcta tttaaaattt ttcaaattta aaaaagctta aaaaccgaca attttgcttt
    38281 tatcaaaact agaatttaat tctttttgta tactctctat aaaatcttgc attttaaata
    38341 ctccatcttc agtcacagct accttcaaag cagtattttt aacaaccatt aaaatttgcg
    38401 ctccacttaa ttcgtaattt gctaaaagat taacatcaaa tgctttttca aaggatgctt
    38461 ttctaggtaa aaatttctcc cacattttaa gcctatcttt aaaatcaggc tttttaaatt
    38521 caatcttata atcaaatctt ctcgaaaaag cactgtctaa actttctaaa aagttagttg
    38581 tagcaatgat aacaccatta aaacgctcaa tttgctctaa aaaaatattt tgcatttgat
    38641 tatgcatctt atcacttccg ctactgcttt caacccttgt gcttaaaaac tgatcagctt
    38701 catttaaaag caatatagga ctttgtttgc aagtttgaac tatgtttttg taagtatcaa
    38761 aaattttcct tacattttgt tcgctctcac ccacccattt acttaaaatt ttagaacaat
    38821 caaagctaag cactgttttt ttcatcgatt ttgccatagc tagggctgac atcgttttcc
    38881 ccgttccagc aggtccataa aaaataatct ttgcttctat atttttattg ctctttatcc
    38941 cccaagaatt tagcctttca agtacttttt tatcttgttg ttttaagata ttttccaaaa
    39001 gctctttagt attttgaggc atgataatat catttatatc tatacttggc tctataagct
    39061 caaaaatatc ttgctctttt aaaacatttt cgattttaat ttttttattt tgttttggct
    39121 cgaaatttat aattctttgt aaaatttcat ctgtaataaa aaaactctta gaaatatcac
    39181 caaaggcatt taagtattca tcatattcta ttaaattaag aagaggagca ttttcttgca
    39241 ataaactttt atttttatgc ttttctaaat cattttcact gactaaagaa agtaaagaat
    39301 tcatctctct agatactgag ttttcattgc ttagtgtata ttcttcttta agaagagcta
    39361 gaaaaataat ctgctcttta tactcaagac tatactcttt aaaaatatct gctaaaatat
    39421 tataaaattt acttttctta agtctttctt taatatgttt ttcataaagc ttgatttgtg
    39481 ctttaagttc gtcactatat gtgcttgaac gtataaaact caatctctca tacagttcaa
    39541 ctcgcataaa ttcatctttt aaatattcta aatactctcc ataagcttct tttttatcca
    39601 aatttaaacg aggcttggct tctaaaaatt ctaaaaaata ctcacttaaa ctcaactcgc
    39661 tttgcaataa actaagaatt aaattttggc ttttattgct ttctatattt ttaaaaaagc
    39721 cagaattttg atttacaaaa cctctttcaa taagcctttt taaatcctct aaagtatcta
    39781 aatacgaata tttttcacta ccaaaaattc ctgtcaataa agtaaaagca ttgatagaag
    39841 atatggaaat gacataattt ttacaaagtt ctctcaaaat caaagcttca ttctttgaac
    39901 actttaattc tttataaatt tgactttctt ctatattttt aagacttaaa aattccttta
    39961 gcctgaccat tttattttct aaattccttt atctcattct cgttaaaatc aacacaaata
    40021 ttttcattca aataatgatt ttcataagga agatagcaca atcttaaacc caaatttgta
    40081 attaaaaagt tattattaaa aaaaacttgc tccatatcat caaaacattc atcgcaaaca
    40141 agattcagtt tttgatgcaa gagttcttta aatttcaaat tatccacatc ataaagctca
    40201 tttaaactta aaaaaacttt tttatccata tcgaaaacaa aattattaag ctctaaaatt
    40261 gcgcgattat cctcttcata aaaataatac cattcttcaa aactaagctt tccatctttt
    40321 agtacgatag gcttttggcg aatttgttca aaactaacaa tgtcgttata cataggacga
    40381 aattgtctga tctcatcttg atgggctaaa aaatcaagac tgcgtttgat tcttatattg
    40441 ttttgctctt tgataagttc aagagttgtt gttcctagtt tatttccttg aattttttta
    40501 ttatcaaata ccagttcttt agaagaagaa attttatatt ttttttctcc atcctcccat
    40561 gaatttgctg tttgaaacaa agctatctcg atatttgtat caagatcgct cagtattaaa
    40621 aaactagaac tagtttgatt aacatcccta tcaaaaatgg gtacaaaagg agcattatca
    40681 taaactatag caaaaacctg cttatctttt aagtcataaa aataaatttc acccttataa
    40741 atttgcgcac aaaccaaact cacaaaaaag cataacaaca gccctatttt caaattttat
    40801 ccttaaaatt cattaaaaca atttttatac gcgaaattct atcaacaaaa ctgattttat
    40861 tatcacaaat ttcatagaaa atttcataat ttgcgctgtt taaattctga ttgaatccgc
    40921 attgagtttt ttgcatattc ttaccattcc acaaaggctt tgcttccaaa atatctttta
    40981 atatatcttc ataataggca tttttaaaaa atttttgatt aaataccatt ttgctatagc
    41041 acaccgaatt taaacaaata tcctctctga ttttaagttt aaaaaaagct tgtccaagtt
    41101 tataaacttc taaatttaaa gccttatttt ctttttttaa aaagccaaaa tcgttgattt
    41161 taatagttgg tgtgctaaat acaaccttca ttttttggct agaataatct tgatttttta
    41221 aagcacaagc actaaaaaac aaaattaaaa aaaagataaa aatttttctc aacactctta
    41281 acctatttta aatttttaaa actaagattt aattctaaat taagctcttt aaccattttc
    41341 atcacagctt gcaaatcatc aatttgcttt gcaactacac gaatttcatc tcctcgtata
    41401 gaagagctta cttttagctt actatcttta atagccttat tgattttctt agcattttca
    41461 ctatcaatgc tatcattggc ttttaaattt aaacgaaaca tcgctccact ttcgcgcgaa
    41521 agctctttaa tagcacttga attaatacct cttttgataa gttttgaaat cacaatatct
    41581 tttagaacat caagctttgc ctcacttgaa gaatgaagtt taaaaacacc atctttctcg
    41641 ctaaattcaa tttcacactt aatacctttt aaatcatagc gagaatcaag ctcttttttt
    41701 gcttgctcaa aagcattttt aagctcttgt ttatccaaag ccgctgaaat atcaaaacta
    41761 tgttcacttg ccattttcta tccattcttt taaattatca taaaccatag acatcaattt
    41821 ttccaccgct tctttgcttg cccaagccac atgtggagta atgatgagat tttctttatt
    41881 tttgatattt aagagaggat gattttttat cataggttca ctctctaaaa catcaagtcc
    41941 tacgcgtata tttttttcat ccattatttt tgccaaatca ttctcattaa tgattccgcc
    42001 cctgcctaca ttgaccaaaa tcgcattatc ttttaaaagt tttaacttct cataagtaag
    42061 caaatttttc gttttttcat ttaaaggagc gtgaatgcta acaatatcgc aagttcttaa
    42121 aagctcttcc aaatttaagc attcaaattc ggcattttga ttgagtccgc ttgttgaata
    42181 ataacaaatt ttagccccaa aagcactaga aattttagcc acttctttac ctatactgcc
    42241 cagtcctata ataccgtgct tttttccttc cattgaattt aaaattctac caaaatctgt
    42301 aaagataggg ctatcgcacc atttgccctc tttactccat ttatcatagt aaggaatatg
    42361 atttaaaaaa gcaaaaataa atgcaaaagt atgctgaact acgctcatag tagaatatcc
    42421 agcagcattt ttaacgataa tgcccttttc tttagcatat tcaacatcga tattatttac
    42481 acccgtagct gtttctaaaa taagctttaa attagggcaa gcatccataa cttctttatc
    42541 aataacaact ttatttgtca taaccacatc cgtatctttt aaacgctcta tggtttcttt
    42601 tctatctgtt aaagcataac tttgaaattc tccaaaattc ttaaaaatac ttaaatcata
    42661 atcccctaaa gttgccgcat ctaaacaaac aattttcatt tctaatcctt tataatatgt
    42721 cctacaaatt tagaataatt atcaagcaca agtcctcctt ttctaaatcc taagccacac
    42781 ccttcataag caaagaaaac acctgcttga tagtattcgt tttcacatga attaaactct
    42841 acatattctt gataaatagc cttattattc ccataaggac ctacattctc atgtaaaatt
    42901 ttaccttctt tgattatact aatatttgcc ccttctctac caaaaacagg ttttttcaca
    42961 taatcttttc cctctaaagg aacatctcgt gtttctaaaa gtaatggatg atttgggaaa
    43021 agttcccata aaatttttaa aattccctta gattgaaata aaagcgtata agcaggattt
    43081 aaaataatag ctttttgatt tctcatgatt tgcgttaaaa gcatggctag ttcgccctct
    43141 tctatggcta tatcttccca aggaacgagc ttaaaccaat attcataatt tacaccctct
    43201 ttaaaaattc cctcttcgct aaattctacc tcatctacaa aagaaaaatc tgtttcaaat
    43261 cctgcttcat ttgcaatatg agcaagtaat tttgtagtga tttcttcctc tttacttcct
    43321 gccacacttg aaaaaagaat tttccatcct tgataatatt cttcaaagcc ttgagtatcc
    43381 tcttcaaggg taatcaatct tttaaaatta tccatcaagc tttcataaat gctattaaat
    43441 tgcttacttt catccatgcc attttgcttt aaaatcgccc attgtaaaat cgcactttca
    43501 aaaagagcag tgggggtatc tgcattaaat tctataagct ttataggctt gccatcaagt
    43561 ccacccgcta aatcaaaacg gccatataaa tgccaatgaa cctcattttc ccaactcatt
    43621 ttaatagcat caacaagatt aaaagggatt ccaagctcat caaaacgatt attatctata
    43681 acattttgtg ctgcagctac aaacatatca taaagctcat tgactgcctc ataataagca
    43741 ttggcttcat tttcacttac acatactaat ttatcactta tataatcact tccatcttca
    43801 tctgtatgcc aagaaaaacc tatattttct aaataatctt tttgaagttt gtctacttgt
    43861 agtaattgca ttatttatcc ttaagagcca aaagaagaac tagaacttgt ggctttagag
    43921 cctccaccaa aaaaacctga ttttgaagca cttgaggcag agcctgctgt gcctgccttg
    43981 ttaaaactat taacacttct ttgataagca ctttgatttg aaaaagcgcc tcgttgttga
    44041 ttggcaaaat tttgattatt aaagagctta gagcctatcc agctacccaa aattgcaccc
    44101 gcagcacttg caagtaaggt ctctcctaag cttaatcctc cactgctgat ttgaccgccc
    44161 tctttagtca aatttgaagt tccattatca atcttagctg cttcttcttt gatgagcgca
    44221 tccatttcct ctttgcttag cactctttcc gtgccattga tatcttttaa aacaactcta
    44281 gtttcatcac ttggaaattg atctttgatt ttatattgac ctggggcgat ttcttcaatg
    44341 ataacaaagg ctccttgagt gtttgctgct tgatttaaag tatcactatt atcattgcta
    44401 cttccacatc ctaccaaagc tccacctgca acagctgcaa ggccgcttat cataccgatt
    44461 tgaataattt ttttaatttt tttcatagtc ttgatcctca aatgagattt agaatttatt
    44521 ttttgataaa attctaacaa aaaataatca attaaatctt acaaaaatga aaatatttta
    44581 aagaaataaa atgcaatctt aatatatata aaataaaact aggattttaa aaaaggtaat
    44641 tttgcaaaga aatcttaaat taagaaaaaa gccctttcgg gctttgggtt aaagtcttga
    44701 ctcgtagcgt ctaagcatat aaagtctttt aagcattttt ttgcgagctg aaattttttg
    44761 ttttttacga atttcagtca taggctcaaa aaatcttctc gctcttactt cagtaacaac
    44821 tagatttcta tctacttgtt ttttgaactt acgatacgct tcgtcaaaag actcgttagg
    44881 atgtacctta attcctggca ctatcctcac cacctttctg tgtaaatttt tgttgtgaat
    44941 tatgattata gaatatttct tattaatcca aacttagaaa gcatttaaaa attgttttag
    45001 ttttttgggc tataatcgta attactaatt ttttacgagg tttttcatgg aaaatcacat
    45061 caccaactat actaaaaagc gttattttgt atatctaatt gcaacaattg taatattttg
    45121 tttacctttt attacaatta atggcaacca tttcttttta ttgagctttg atcattctaa
    45181 gttgaatcta ttttttattt cattttcaac tcaagaatta tatcttatgc cttttttgct
    45241 tatttttctt tttttattta tattttttat aaccacttta ggaggaagag tttggtgtgc
    45301 ttggagctgt cctcaaacta tttttagagt gatttataga gatattatcc agactaaact
    45361 tttaaaaatt cgtaaaaata ttaacaataa acaaaaagaa tatgaaggat attattttaa
    45421 aaaaatcata ggggtgattt tattttattt catatcttta gtcgctgtaa gtaatttgct
    45481 ttggtatttt gttccgcctg aagatttttt tgcttatata caaaatccag gagaacactt
    45541 acttttattg ggtgttttat tttgcgcaag tttgttttta actttagata ttacctattt
    45601 agcagaaaaa ttttgtattt atgtatgtcc ttacgcaaga gttcaatctg taatgtttga
    45661 ccgcgatacc atgcaagtta tttatgatga aaaacgcggg ggagtgattt atgatggaca
    45721 taccaaactt tacaaaaaac cgcctgaggg tgaatgtata ggttgtgaag cctgtgtaag
    45781 catttgtcct actcatatag atatacgcaa gggtatgcaa cttgaatgta tcaattgttt
    45841 agaatgtgct gatgcctgtt ctaaagtgca aagcaaattt aatagaccaa gtttgattaa
    45901 ttggaccagt gtaaaggcca tagaaacacg caaaaaagta aattatctcc gctttagaac
    45961 cattgcttat tttattgttc ttgtgattgc tttaattgct ttaatgatta tgggtagtaa
    46021 aaaagaaaat atgcttttaa atatcaatcg tagcagtgaa ctttatcaaa tttcgcatac
    46081 taataatggt ttagaaattt caaatgctta tacttttttg tttcaaaata ctgattctaa
    46141 agctcatgaa tattattttg aagctagcct agaaggcatt gataatggca tagaaatcat
    46201 tcgtccaagt aaagctttta cattaaaagc aggagagcaa gctaagaaaa ttgttgtaat
    46261 aaaagctact aaaaagctag cagataatga tcaaaaagat gtgatttttc cacttcacat
    46321 caaggcctat gccaaagata atgatgagat tgtcattttt agagaaagta tttttgttta
    46381 tcctaaaagc acaattttaa aggggtataa tgaatccaaa taaaacacct tctaaaaaag
    46441 ttttagcaag aagagaaaag attaaaaatg ttgcttttga tctattttta accaagggtt
    46501 ttcaagaaac cagtttaagc gatattatca aactatcggg cggttcgtat tctaatattt
    46561 atgatagttt taatagcaaa gaaggtttat tttttgaaat tttagatgat gtttgcaaaa
    46621 aacattttga cctaatagcc tctcaaactc aaactattaa agataaaaat ttaaaagaat
    46681 ttttaacctc ttttggactt acttttgttg atattttcaa tcaagtccaa accgtcgcct
    46741 ttggcaaaat tattttctct caagtttatg ataaacataa gcatgttaaa aattggattg
    46801 aaaacaatca gaaaattttc tcctatagca tacttataga actttttaaa aagcaagata
    46861 gcagctatat ttcaaacaat gcccaaaaac ttgccatgct tttttgcgcc atgttaagag
    46921 aaccttatca tagtttaaat gttttagccg atactccttt aatgaacaaa caagaacaaa
    46981 aagaacatgt ggaatttatt gtcaatatat ttttaaaagg aattgaaaat aaaacctcaa
    47041 tttaattaag taaatataaa aattattaac caaatttgag ctataatatg tcttaaatat
    47101 attgtaataa atattacaat atatttaaat taaaaatctt aaggcaaaaa tcatgaattt
    47161 gtttcaaaaa aatacccttt tactcttaag tgctttattt ttattttctg cttgtaacaa
    47221 agaagaagca cctcaaaaac aaacactccc tcaatccgtt agcacaatga gtgctaaagc
    47281 tgaaaattta ccgcttaact ttacttatcc tgcaaaactt gttagtgatt atgatgttat
    47341 catcaaacct caagtaagcg gtgttatcgt ggagaaactt ttcaaagcgg gtgatttaat
    47401 taaaaaagga caaacacttt tcattatcga acaagataaa tttaaagcaa gtgtaaattc
    47461 agcttatgga aaagctttaa tggctagagc aaattttgac aatgccagca aagattataa
    47521 ccgttcaaaa actctttata ataaaggagc aatctctcaa aaagaatatg atagcgcctt
    47581 agcaaatttt aacaacacaa aagcaaatct caccagtgct agagcagact tagaaaatgc
    47641 acgcattgat ttagcttata ctgaaattaa agctcctttt gatggtattg taggagatgc
    47701 tttgattaat ataggagatt atgttagctc ctcttcaact gaactcgtaa gaattacaaa
    47761 cctcaatcca atctatgctg atttttacat ttcagatacg gataaactca atatcgttcg
    47821 caatactcaa gatggaaaat gggatttaag caatatctat gcaaatttaa atcttaatgg
    47881 agaaaccgtt caaggcaaac tttattttat tgattctgtt atagatgcta atagtggaac
    47941 agtaaaagcc aaagctatat ttgacaacaa caactcaaca cttttaccag gtgcttttgc
    48001 aacaattact tcagaaggtt ttatacaaaa aaatggcttt aaagtgcctc aaatagctgt
    48061 taaacaaaat caaaatgatg tttatgttct tcttgttaaa aatggaaaag tagaaaaatc
    48121 ttctgtacat ataagctacc aaaacaatga atatgccatt attgacaaag gattacaaaa
    48181 tggcgataaa atcattttag ataactttaa aaaaattcaa gttggtagcg aagttaaaga
    48241 aattggagca caataatgtt ttctaaattt tttatcgaaa gacctgtttt tgcttcagtt
    48301 gttgcaatta tcatttcttt agctggagct ataggtctta caaatttacc tatagagcag
    48361 tatccatctt taacccctcc tacagttaaa gtaagtgcaa cttacacagg agctgatgca
    48421 caaaccattg cttcaacagt tgcaagtcct atcgaagatg caatcaatgg cgcagataat
    48481 atgatttaca tggattcaac ttcaagttct tcaggaacta tgagtttgac tgtttatttt
    48541 gatatcggta cagatcctga tcaagccacc atagatgtta ataatagaat ttcagccgca
    48601 actgcaaaaa tgccagatgc agttaaaaaa cttggagtaa cagttagaaa aacttcctca
    48661 gcaacacttg ctgcaatttc tatgtattca agtgatggct caatgagtgc agtagatgta
    48721 tataactata tcactttaaa tgttttagat gagttaaaaa gggttccagg agttggagat
    48781 gcaaacgcta taggaaatcg taattattct ttaagaattt ggctcaagcc tgatttatta
    48841 aataaatttg gaatcacagc tactgatgta atttctgcga ttaatgacca aaatgcccaa
    48901 tacgcaactg gtaaaattgg cgaagaacct gtaacccaaa aatcacccta tgtttattct
    48961 atcaccatgc aaggaagatt gcaaagcccg agtgaatttg aaaacattat tttaagaaca
    49021 aataatgatg gatcattttt aagacttaaa gatgtagctg atgtggaaat aggatcacaa
    49081 caatacagct cacaaggacg attaaatggc aatgatgcag ttccaattat gatcaatctt
    49141 caatcaggag caaatgcact caatacagca aaacttgtag aagctaaaat gcaagaactt
    49201 tcaaaaaatt ttccaaaagg tttaacatat aaaattcctt acgatacaac aaaatttgta
    49261 atagaatcaa tcaaagaagt tgttaaaact tttgttgaag ctctaatttt agttatcatt
    49321 gttatgtata tgttcttaaa gaatttccgt gcaacactta ttcctatgat agctgtacct
    49381 gtttcattgt taggaacttt tgctggactt tatgttttag gttttagtat taacttgctc
    49441 acgctttttg ctttaatttt agccataggg attgttgtag atgatgcgat tatagttgta
    49501 gaaaatattg ataggatttt acatgaaaat gagcaaataa gcgtaaaaga tgctgctatc
    49561 caagcgatgc aagaagttag ctcacctgta atttcaattg ttcttgtgct ttgtgctgtt
    49621 tttatacctg tgtcttttat ttcaggcttt gtgggagaaa ttcaaaaaca atttgcgctc
    49681 actttggcta tatctgtaac catatcaggt tttgtagctc ttaccttaac accttcttta
    49741 tgtgcactct ttttgcgacg taatgaagga gagccattta aatttgtaaa gaaatttaat
    49801 gatttctttg actggagcac ttctatattt agtgcaggcg ttgcttatat gcttaaaaga
    49861 accattcgtt ttgttttgat tttctgtatc atgctcggag caatttttta tctttataaa
    49921 caagttcctg gctctttggt tcctgaagaa gatcaaggtt taatgatagg tattatcaac
    49981 cttccttcgg cttcagctct acatagaacg atctcggaag ttgactctat gagtcaagaa
    50041 attctaaaaa ccaatggcgt aaaagatgct atggctatga taggttttga tttatttaca
    50101 agctcactta aagaaaatgc cgctgcaatg tttatagggc ttgaagattg gaaagataga
    50161 aatgtaagcg ctgatgaaat catcatggag cttaataaaa aatttgcccc tgatcgcaat
    50221 gctgcaagtg tatttatagg cttacctcct atacctgggc taagtatcac gggtggtttt
    50281 gaaatgtatg tgcaaaataa aagcggaaaa agctacgatc aaattcaaga agatgtaaat
    50341 aaacttgtag cagcagccaa tcaaagagag gaattatatg gggttcgaac tactcttgat
    50401 acgagctttc ctcaatataa actcatcatt gatagagata aactaaagca ttttaattta
    50461 aatatgcaag atgttttcag tacaatgaat gcaaccattg gaacatatta tgttaatgat
    50521 tttactatgc taggtaaaaa tttccaagta aatatccgcg caaaaggtga ttttagaaat
    50581 acacaagatg cgttaaaaaa tatttttgta agatcaaatg atggaaaaat gataccactt
    50641 gactctttct taactctaca aagaagttca gggcctgatg atgtaaaacg attcaacctt
    50701 ttcccagcag cacaagttca aggtcaaccc gcaccaggtt atacttcagg ccaagccata
    50761 gaagcgattt cccaagtagc aaaagaaact ttaggggatg attactctat agcttggagt
    50821 ggttcagcct atcaagaagt ttcaagcaag ggaacaggga gctatgcctt tgctttgggt
    50881 atggtgtttg tattcttaat cctagcagca caatatgaaa gatggcttat acctttagct
    50941 gttgttacag ctgtaccttt tgccgttttt ggttcgtttt tacttgtata cttaagagga
    51001 tttactaatg atatatattt tcaaaccgga ctcttacttt taattggact ttcagctaag
    51061 aatgctattt tgatcgttga atttgctatg gaagaacgct ttaagaaagg taagaaaata
    51121 tttgatgcag ctatcgaagc tgcaaaactt cgctttaggc cgatagttat gacttcttta
    51181 gcttttactt ttggggtttt accaatgatt tttgcaactg gagcaggaag tgcttcaaga
    51241 cattctttag ggacagggct tattggtgga atgatagctg cttctacttt agctatattc
    51301 tttgtacctt tatttttcta tcttttagaa aatttcaacg aatggctaga taagaaaagg
    51361 ggtaaagttc atgaataaaa taatttcaat aagtgttata gcaagcttaa gcctttttat
    51421 ttcagcttgt tctttaagtc caaatttaaa tatcccagaa gcaaattata gtcttgataa
    51481 taaactgggc gccctatctt gggaaaaaga aaacaatcat actctttcta aagaatggtg
    51541 gaaagaattt gatgatgaga aattaaatca cgtagttgat ttagctcttc agaacaataa
    51601 tgatttaaaa cttgctttta ttcatatgga acaagctgct gcccaattag gcatagattt
    51661 tagtgattta ttaccaaaat tagatggtag cgctagtgca aatcgtgcaa aaacacctac
    51721 aaatgctcca agcaaccgca ctgggggagt aagctatggc aatgatttta aaatgggact
    51781 ggatttaagc tatgaaattg atctttgggg aagataccgc gatacttatc gcgcttcaag
    51841 atcaggcttt aaagccagtc agtatgatta tgaagctgcg agactttcta tagtttcaag
    51901 cgtggttcag acttatttta attttgtaaa tgcaaatgaa aatgaaaaag ctttaaaaga
    51961 tgcttatgaa tctgcacaag aaatttatca aattaattat gaaaaatttc aagtaggagc
    52021 agtaggagaa tacgaaatcg cgcaatcaag agcaaattta gaaagtactg ctttacaata
    52081 caatgaagca aaattaaata aagaaaacta tcttaaagct ttaaaaattc taacttcaaa
    52141 tgatttaaac gatattcttt atcaagatca agcttatcag gtttttaaac tcaaagattt
    52201 tgatataccg agcggaattt caagcactat actcttgcag cgtcctgata ttggatcttc
    52261 tttagaaaaa cttactcaac aaaattatct agtaggagta gctcgcacag ctttcttgcc
    52321 taatctttct ttaacaggct tattaggatt tgaaagcggg gatttaaata cacttgtgga
    52381 agcgggctct aggacttgga gtataggtgg gaatttcgta atgccaattt tccactgggg
    52441 agaaatttat caaaatgtga atttagcaaa actcaacaaa gatgaagctt ttgtaaatta
    52501 tcaaaatacc ttagttgcag cttttggaga aattcgctat gctttaattg caagaaagac
    52561 tattcgcttg caatacaata acgcacaagc aagcgaatta tcctacaaaa gaatttatga
    52621 aataagtaaa gagcgttatg atgtgggcga aatgtctttg caagactatc tacaagcgcg
    52681 tcaagactgg ttaaatgcta cagttgcttt taataatacc aaatattctt atgctaattc
    52741 tatagtcaat gttatcaaag cttttggtgg cggatttgaa caaggtgaaa atatcagcaa
    52801 aaatatagaa gaagaatcaa aaactttaga tatgtccttt agagagtaaa acttactctc
    52861 taaattagag cttattttta aaaatctcta tttaaatcag aatcgctaac ctcatatgct
    52921 ttataaatag ctggtaataa ttttctcatc gcataatcta aatgataaaa ttgcttataa
    52981 acttcctctg catttaagtc cttagcattg ctaaagtcaa atacttcagt attgccaact
    53041 tttgaaatat tcttatcaaa ataagaataa aattccgccc tttgtttaaa caatgcgttt
    53101 aaattttcta ctacttttgt tttatccata agccatcctt tctaattatt ttgaaagtta
    53161 tagcattttt ttgctaaaaa taaaaaaaat ttacacttga tttaataaaa aattgataaa
    53221 gttatattat attttctact ttaaggtggg ttaatgaatt tatttcaaaa tttggcttta
    53281 aaatattctc atgctatgat ggaaaaatct ctacataaaa gtttcaatgt cgaacttttg
    53341 aaaaatcctc aagaaaaaca agccaaaaaa gataaaactt atatgcttta tgctcacata
    53401 cccttttgcc ataccttttg tccttattgt agttttcata aatactatta tgatgaggaa
    53461 ttggctaaaa tttattttga aaatttaaga aaagagctta tgcttataaa agataaaggt
    53521 tttgatttta gctcaatgta tgtagggggc ggaacaacat tgattaatga aaatgaatta
    53581 ctaaaaactc tagaactttg taaaaaactt ttcaatatca aagaaatttc ttgcgaaagc
    53641 gatcctaatc atataattcc tgaaaaactc tctatgttta aaggtataat cgatcgttta
    53701 agctgtggaa ttcaaagttt tgatgatgaa attttaaaaa aaatagcaag atataataaa
    53761 tttggttctt ctaaacaatt acaagaaaaa atttcaaaag ctttgggaat tttgccaatt
    53821 tttagccttg atttaatttt taatttcccc tcacaaacag aagaacagct tttaaatgat
    53881 ttaaaaatcg ctaaaaattt agctcctcaa caaatcacaa cctatccttt aatgaaatcc
    53941 aatctaacca aagacaatat agccaaaagt cttggtgttg aaactaaaga taatgaattt
    54001 aaatactatc aaatgatacg aaattttttc aaggattatc agcaaaataa tggctggagt
    54061 ttttctttag aaaaaaatca actcaatgat gaatatgtaa gctctcacca tgaatattta
    54121 ggcgttggaa gtggagcttt tagcttttta gatggggagt tgcttatcaa tgcttttgat
    54181 ttaaatgatt atgcaaagat gatacaagaa aaacaaaatg ccaatatagc aaaagcgagt
    54241 tttacacgaa aagagattat caaatacata tttttaactg aaatgtttgc agggaaaata
    54301 caaattgata aattcaatca aacccttaat tgtgatcttg aaaaagaact cttcaaagaa
    54361 cttttaggac ttaaaataag caatgctatc aaaaaagaaa atggcgcctt aatcacaagt
    54421 gaatttggac agtatctctt tgtggtctta atgaaggatt tttacacagg aatggatctt
    54481 gtgcgcgcgg tatttagaga tagtaagcgc ttaaaaaata aagattttat caatataatg
    54541 aaagaaaata taagttctat ttaatttctt tttttgaaat taaatagaaa tgaaaattaa
    54601 aacggacgaa tcaccatcat taaagcaatg ataataaaca ttaaagtagg aaattcatta
    54661 taaattctaa aatatcttcc gctttttgta gaagtatcat tcgccaaagc ttttaagcaa
    54721 aaataattat gtatatgaaa aatgattaaa agcgtagcac aggtaagttt tgcatgcata
    54781 aagccagaac ccaccatcaa aacttcttta tgagcatgta acattaaact cccactaata
    54841 accgttgcta tcatcgctgg attttgtata ccaaaataaa gtcttctttc ttgtatcttt
    54901 acaacatcaa caaaaccttt attgttttta ttttctgcat gatatacaaa caaacgaggc
    54961 aaataaaaaa gtcctgccat ccaagaaaca aatgctaaat aatgcaccca tttaatccaa
    55021 gaataatact cattaatcca ttctgtcatt tttttccttt tttataaaaa tttcttttat
    55081 taagattaag gcaacgctta tgtttatcat cacatctgct acattaaaaa tagcaaaatg
    55141 aaaccattta tgccaaaaaa acatatccac tactcccccg tgtataaaac ggtcaagcaa
    55201 attcgaacac cccgccccta gcatcatacc aaaagccact aaatgttctc ttaagaattg
    55261 tttttgccac aaaaggtata taacaagcgc caatatcaag gctaaatgta aatattttaa
    55321 ataatgctct aaaaaactaa acatagaaaa agcaactcct gtgtttagag cataagttaa
    55381 atccaaatac tcactttgcc aacgcaaacc cgataaagtt aaagatttta cccactgatc
    55441 aaaagcaaaa actgcaataa aaactaaaat gaagatcaag atagttttat atcttttaac
    55501 catttaatgc tttcttgaaa aattcaacta catttttcat ttctttttct aaaattttag
    55561 catctttagc ttctagtaaa agtctgatca aattttctgt tccagaatag cgaaataaca
    55621 cattaatatt tttattttcc aaatcttgtt ttaattcctt caaaccttta attttatcca
    55681 aatctttttt ttctgaaatt ttaagattgg ttaaaagttg aggataaggt ttgatttgtc
    55741 ctaaaatagt acttgcggac tttttcttgc aaagcatcaa agcactaaat tgcaaagctg
    55801 ctataagacc atcgcctgtt tttgcataat cgctaaaaat aatatgccca ctttgctctc
    55861 cgccaaagtt tccaccccta acttttaatt tctcaagtac atatttatcg cctacattac
    55921 aagtatcgag ctctatacca tgtccattta aaaattcttt caaagcccca ttgctcatga
    55981 tagtagctac cacactggat tttaatttgc cctgttcttt taagaaaaga gctaaaactc
    56041 caagcaggct atctccattt gctacttcac ccttttcatc taccactacc aaacgatccg
    56101 catctccatc aaaagcaaaa ccaacatctg cacgcaaacg ctttacttca gcggctaaat
    56161 ttgaaggata caaggctcca caattttcat tgatattaag cccattaggt ttatcactca
    56221 tcactataac ttcagctccc agttctttaa aaacagtcgg agctacctta taagccgctc
    56281 catgagctac atctaaaact acacgcaatg attttagagt taaatcctta gggaaggaat
    56341 tcttaataga aacaatatat cttcctataa catcatcaat tcttttagcc tggccaattt
    56401 tctccatatc aactttagag ctttggataa gcttatcatc ataataaatt tcttcaatct
    56461 ttttttctat atcttcgcta agcttattcc catgtgcatc aaaaaattta atcccgttat
    56521 cataataagg attgtgtgaa gctgaaatca taatacccgc atcacaacgc atatcttcag
    56581 ttaaaaatgc aattgcaggt gttggcatag ggcctatttg tatcacatta tatcctatag
    56641 aagtaagacc tgaaacaata gcattttcta tcatataacc acttcttctt gtatctttac
    56701 ctactaaaat attatttgta acactcttat ctttaaaata aattccagcg gccatagcaa
    56761 gacgcatagc taaaaaacta tctaaaaatt cgcccgcttt tccacgaacg ccatctgtcc
    56821 caaaaagttt catcattaaa cctttctcaa tgaaattcta gaaattatag caaagctagg
    56881 ataaagaaat ttaaacaaac cctaaaaaga tttagggttt gataagcctt atagttcagg
    56941 ctttggagtt ttttctgtag aaacagggag ttgaggataa accactgctg gtttagttcc
    57001 agttaaagat tttaagaaag tttctatact ttttgcctct ttatcagaaa tttgaatgcc
    57061 aagttgcaca ctacccattt ctttaattgc atcggttaat ttccatatcg caccattgtg
    57121 gaaatatgga gctgtctcaa ctacatttct taaagttgga gttttaacca tgccattttc
    57181 atctccttta aaatcaccca aatttgcaaa tttatactta cctgcaacct caaatgcttg
    57241 catatttcca cctaaattca caccattatg acaagctaca caacctttgt caatgaaaag
    57301 ttttaaacct ttttgctcct ctttagttaa agctttttca tctccattta agaaattatc
    57361 aaagcgagat ggagtgatta aagttctttc aaaatttgct atcgcatcag caatattgtc
    57421 aaaattcaca ccgcttttgc cataaatttt cttaaattct ttaacatatt caggtaaaga
    57481 agcgattttt tctacagcta attttgctgg agttgccatt tcagcttcag attcaatagg
    57541 tcctttggcc tgatccgcta aagttcctgc acgcccatcc caaaattgag tcgtgtttaa
    57601 aacagcatta tatacagttg gggaatttaa atgatgaggg tttgcagtcc atttatgtcc
    57661 cactgccgca ctaataccat cagctccacc aagtcctaga ttgtgacagg tattacatga
    57721 aataattcca ctttttgaaa ggcgaggctc aaaataaagt tttttaccaa gctcaacttt
    57781 atcaagagta aattcagtag cctttactcc atttgctttc aaaatctcat ccacgccttt
    57841 ttgatctttt ggtaaggcaa ctaaacctga atttttagcc tcttctataa gactttgagc
    57901 atttaaactt gaaaaagcaa ctaatgatgc aatcaataac gatttgactt tcatttacaa
    57961 actcctttac tttta
//
LOCUS       DBBXOW010000004        48154 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.004, whole genome shotgun sequence.
ACCESSION   DBBXOW010000004 DBBXOW010000000
VERSION     DBBXOW010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 48154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48154
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.004"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(147..1145)
                     /gene="mnmH"
                     /locus_tag="ACJE1S_000226"
     CDS             complement(147..1145)
                     /gene="mnmH"
                     /locus_tag="ACJE1S_000226"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HGG0805806.1"
                     /translation="MLSEVEFTEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKARGASYICQNMSKHILELTQKFRIGDKIGIYCSRGGLRSKS
                     IAVILSELGYRVVRLKGGFKAYRSFLAHYFDNEINLDFFALCGNTGCGKTELLELLPH
                     HLNLEKMANHLGSSFGDILGTQPTQKAFEASLFHTLNSLKDFIFIESESRKIGEIVLP
                     LKLYEKMQKAFKIHCFCSLEKRIDRIQKIYQEKMTPLKFKECLAKISPYISVNLRQDL
                     LKSYEQREWQRLIALLLAYYDKSYKKPQKIDFELNTDDIFKAKEELLGYFKTQLLF"
     gene            complement(1135..1620)
                     /locus_tag="ACJE1S_000227"
     CDS             complement(1135..1620)
                     /locus_tag="ACJE1S_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HGG0805807.1"
                     /translation="MQYLYAPWRSEYFEKEKSECPFCDCANKIKSDEELGVIFRAKYC
                     FGVMNRYPYSAGHFMIIPYLHEEHIENLSDEIWQEMSHFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWAGDTNFITTIGETRVCGANIEQVYQKLVLAFKNA
                     Q"
     gene            complement(1631..2407)
                     /gene="trpC"
                     /locus_tag="ACJE1S_000228"
     CDS             complement(1631..2407)
                     /gene="trpC"
                     /locus_tag="ACJE1S_000228"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HGG0805808.1"
                     /translation="MILDKIFEKTKEDLKERKAQLPYDMLGRSLASNPFFPKDVKAAL
                     KRIENEVRIIAEVKKASPSKGVIRENFDPLDIALKYEKNGATAISVLTEPHFFQGSLE
                     YLSMIRRYTHAPLLRKDFIFDEYQILEALVYGADFVLLIARMLSMKELKRLLEFTRHL
                     GLEALVEIHDKEDLSKAIFSGADIIGINHRNLDDFSMDMNLCEKLIPQIPNSKIIIAE
                     SGLENKDFLRHLQNLGVDAFLIGEYFMRQNDEGEALKALL"
     gene            complement(2404..3681)
                     /locus_tag="ACJE1S_000229"
     CDS             complement(2404..3681)
                     /locus_tag="ACJE1S_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG0805809.1"
                     /translation="MYRNLLFVLIGFFLTACGASKTIIAYPDYKQQKSNEFDLRIMKA
                     YNYEYFNQYEEARDEFLALFRDYNITNFLENAFLLTLANNLDKKEEINNIAKPYLDKS
                     DNLKRLSALYALNSYNLKEAQELIQGLLKKKSDDPRNLELYGDVLIRQNNLKDAIKYY
                     QLAYNQVQNEEILFKLVGVYAILNDTSSIKNILENSKNINGCTLKTCILLAKIYNDKG
                     NSKALQEIYIELYNITKNKSFILALIELLSSQNKDKEALHFALKYNADDDMKLYLYQR
                     LKLYNKAKDLSMQIYKRTQEKEYLLRAAVFEFEEANLNKKITPQVVALVSEKFSNAID
                     ENSDALYLNYYGYLLIDYDLDLKKGMKLVELALKKEPQNLYYLDSLAWGYYKQGDCKK
                     AWEILKQTLEDKEFANSDESKAHAKAIKACIKP"
     gene            complement(3654..4028)
                     /locus_tag="ACJE1S_000230"
     CDS             complement(3654..4028)
                     /locus_tag="ACJE1S_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HGG0805810.1"
                     /translation="MIFNKDFSYGFNENACQECGGKCCTGESGNIFANKEELKALREH
                     LQLDEKEFALKYLKKVGFRMSFKEVEFEDGFACIFFDKEKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQEELKKECIGICYLS"
     gene            complement(4018..4719)
                     /locus_tag="ACJE1S_000231"
     CDS             complement(4018..4719)
                     /locus_tag="ACJE1S_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG0805811.1"
                     /translation="MQDSIKLAQLSDGYRYNSDSLLLADFVLEMGIKNQVLEVGSGCG
                     IIGILLKKFVSNLDLSLLDIQQENIELIHRNLKQNNIQAGVLHEDFRNFQNDKKFDFI
                     VCNPPFYRDGAHEGKNTHKNISKFQKYLTLNEFIVRSNALLKPMGVLYFCYEALALDK
                     ICLVLESKKLKLTKIRFVHTHQNISARLVLVQARKSVKSPCEILPPFFIYKNENLSEQ
                     MQEIHSRFRLESYDI"
     gene            complement(4722..4874)
                     /locus_tag="ACJE1S_000232"
     CDS             complement(4722..4874)
                     /locus_tag="ACJE1S_000232"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805812.1"
                     /translation="MLKFFFTISLSSLLFAQNFIDFASQNNALKQEQNTSKENTPLKR
                     IKIPTH"
     gene            complement(4925..5001)
                     /locus_tag="ACJE1S_000233"
     tRNA            complement(4925..5001)
                     /locus_tag="ACJE1S_000233"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4965..4967),aa:Arg,seq:cct)
     gene            complement(5030..7105)
                     /gene="fusA"
                     /locus_tag="ACJE1S_000234"
     CDS             complement(5030..7105)
                     /gene="fusA"
                     /locus_tag="ACJE1S_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HGG0805813.1"
                     /translation="MSRSTPLKRVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(7118..7588)
                     /gene="rpsG"
                     /locus_tag="ACJE1S_000235"
     CDS             complement(7118..7588)
                     /gene="rpsG"
                     /locus_tag="ACJE1S_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HGG0805814.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALELIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(7658..8041)
                     /gene="rpsL"
                     /locus_tag="ACJE1S_000236"
     CDS             complement(7658..8041)
                     /gene="rpsL"
                     /locus_tag="ACJE1S_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HGG0805815.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKASAK"
     gene            complement(8181..9620)
                     /gene="aldA"
                     /locus_tag="ACJE1S_000237"
     CDS             complement(8181..9620)
                     /gene="aldA"
                     /locus_tag="ACJE1S_000237"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HGG0805816.1"
                     /translation="MTTYLNYIDGKFIPHNGEFIEVLNPATKEVISRVASASLEDTKR
                     AIEAAKKAQKVWEAKPAIERANHLKEIASLIRKNANFLTEVLMQEQGKTRVLASIEIN
                     FTADYMDYTAEWARRYEGEIIQSDRANEHIYLYKSAIGVIGGILPWNFPFFLIARKMA
                     PALLTGNTIVIKPSSETPNNAFEFAKLVSQSSLPKGVFNLVAGKGSVVGYELSSNENI
                     GMVSLTGSVEAGTRVMEAAAKNIIKVSLELGGKAPAIVCKDADIDLAVEAIKASRICN
                     NGQVCNCAERAYVHTSIYDEFVDKFVKAMSKVSVGNTLKGDFDMGPLVNQAGVDNALA
                     MLQRATAKGAIVECGGKITDTSGYYFPASVLTNVKHEDEIMQKEIFAPILPIAKFDTL
                     DEAIDMANDCEYGLTSSIYTQNLDIAMRASREIKFGETYINRENFEAMQGFHAGFRKS
                     GIGGADGKHGLEEYLATHVVYLQYNTNKQ"
     gene            complement(9634..9951)
                     /locus_tag="ACJE1S_000238"
     CDS             complement(9634..9951)
                     /locus_tag="ACJE1S_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HGG0805817.1"
                     /translation="MQRYGQIIKIKKEKIEEYKNLHAKPYEGVCEMIKKCNMQNYSIY
                     LFGEYLFAYFEYVGADFEADMAKMARDESTQKWWKVTDPCQISLGYAGQKWLNMEEVF
                     HLD"
     gene            complement(9927..10721)
                     /locus_tag="ACJE1S_000239"
     CDS             complement(9927..10721)
                     /locus_tag="ACJE1S_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HGG0805818.1"
                     /translation="MQKIFDAHLHLWDLDKMPISWLKGNEKLEQNYDFFRAKEEYEGF
                     EFLGAMYVETNSDDLEKEALFALEQKKLHNLLLCLADLKYKEELSSFREVMHTSKKEA
                     KRLFEADFEEKIEILKTFNIPFEACMKNEELSFLEKFLNKNPNLKVVLNHLGSPKIDR
                     LNEYKKDLNLLKKFPNLYIKLSVPDDFSEQTSKEFIYELFAFFKENFSEDKFIFGSNY
                     PVAKIAPAKWAKLIIESKIFKNLNKIFYQNALSIYKEDRCKDMAKS"
     gene            complement(10723..11964)
                     /gene="fucP"
                     /locus_tag="ACJE1S_000240"
     CDS             complement(10723..11964)
                     /gene="fucP"
                     /locus_tag="ACJE1S_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015150 - fucose transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0015535 - fucose:proton symporter activity
                     [Evidence IEA];
                     GO_process: GO:0015756 - fucose transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HGG0805819.1"
                     /translation="MTDSKNIKIAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQH
                     ESGFLQFAYFGAYFIIALPAGYIANKYSYKMGIIFGLALYAVGALLIIPATNLASFHL
                     FLFAFFVLACGIGSLETSANPYMVKLGDEKNASFRINAAQSFNGLGQFVGPIIGGALF
                     LSITKQEEGASAEQIEAALLANMGNVQLVYVGIAAIVILILIAFVLNKLPEGSAVSDD
                     YKQKDDSKPIHVFKHRHFNLGLLAQFSYIANQVAAGAFFINYVVDHNEGLKDAQAAYY
                     FSIALVAFMLGRIVSTPLMKVIKGEKILGLYSLINVLICFGLYFTSGFLSTILLIALF
                     FFMSISFPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPLIIGFINDHYGTGMGYL
                     AMAPLFLYVAWYGFVGSKIKA"
     gene            complement(11975..12763)
                     /locus_tag="ACJE1S_000241"
     CDS             complement(11975..12763)
                     /locus_tag="ACJE1S_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG0805820.1"
                     /translation="MDLKIKNKVCIITGGAKGIGYGIAKLWAMEGGIPVVFSRSMPKE
                     HDEELKNLCKSYEFYEIDLKNYEQIEELIKKVVTKHGGIYALVNNAGANDNLHIENTS
                     TKDLIKSYENNLFHYYAMAKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
                     IGFTREWACAFAKDSVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKTIPLGHRF
                     TTIEEIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEI"
     gene            complement(12778..14049)
                     /locus_tag="ACJE1S_000242"
     CDS             complement(12778..14049)
                     /locus_tag="ACJE1S_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805821.1"
                     /translation="MGHLKLTKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSH
                     IEMDAGISETAYALGAGIFFVGYALFEVPSNLLLHKLGAKIWLSRIMITWGLVTMAMI
                     FIQGETSFYILRFFLGLTEAGFSPGIILYLSYFFPAIYRSKAYGIYQMGVPIAFVFGS
                     LISGFILDYASNMYFKNWQWMFLIEGGITVLVGVFCLFYLDSHPKDAKWLDVKEKTVL
                     LKNIEICNSKAKDYSIKDIFKNILVWKFVFVYFCIQLSIYGVLFYLPSKIAQILQINV
                     GFEVGLLNAIPWIFVFIALPIFTSLADKKRSWNLYAILFLLLASLSMIASTFVANLAP
                     FLFFISLAVIGFIVIQPIFWNLPTQVLKGKGGAAAIALIGSLGNLGGFVAPTLKTYIE
                     NHFGVEFGLITLALIAVLGVLILVHLKMTLN"
     gene            complement(14059..15225)
                     /locus_tag="ACJE1S_000243"
     CDS             complement(14059..15225)
                     /locus_tag="ACJE1S_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HGG0805822.1"
                     /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAV
                     YINHQHGCSQLEFDALQTRDVLIGHGSNANVFGVLIVGLGCEVIQAKVVAEKIKEATP
                     YKKVEYLVIQECGGSKNTIEKGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSY
                     SGLSANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILGY
                     ENLVKSFRADIRGANPSPGNIAGGLSTIEEKSLGCVYKAGTRTLMDVIDYAKPIVSKG
                     LTFMNTPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDA
                     IDINAGSIIDGVKTKEEVRDELIELIVRISDGELVKAEINEQNDFSVWRLATTC"
     gene            complement(15228..15491)
                     /locus_tag="ACJE1S_000244"
     CDS             complement(15228..15491)
                     /locus_tag="ACJE1S_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HGG0805823.1"
                     /translation="MKGYIIVNEKDNVATALRDFKKGEKVANIELLNDIASGHKFALK
                     DIKKDEIIIKYAEAIASASCDISTGEWVHIHNTAGIRGRGDKE"
     gene            complement(15488..16396)
                     /locus_tag="ACJE1S_000245"
     CDS             complement(15488..16396)
                     /locus_tag="ACJE1S_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HGG0805824.1"
                     /translation="MGILKGTLPALLTPYKDDGSINEKEFIHYCEFGISKGLNGLFCN
                     GSAGDSQALSIEEQVKLMRLTKEVAKNNVPIITGIASTIYQNTFTLAQKAYEIGLDAL
                     LLAMPYYYKLSEDALFEYVKDLSSKVKLPLYVYNIPLFAPALSLKFIERVSKLDNVVG
                     IKDSSGDALLLNHILDVLPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEI
                     YKSINEKNIGRALLIQKSLLKAIRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPAT
                     KEELNTRFDEAKELIKTIEKETGIKL"
     gene            16629..17390
                     /locus_tag="ACJE1S_000246"
     CDS             16629..17390
                     /locus_tag="ACJE1S_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HGG0805825.1"
                     /translation="MHQPTLRVLNILELLAKEKLTLSTIAKKLNIPAGTLWPILQTLQ
                     EKQYIRCDLKNKSYYLDFKILELGYNIKSENSIFEMIKKHMKNIRNLTNQTCQMGILK
                     EENVLYLEKIDANNPVQLKSFIGTSYPAYATSLGKALLSNKNKEELKKIYPNNFEKIT
                     ENTLKNIDELYQQIEQIKKEKIAIESGEINPQIECMAIGIEHKNKIIAAISISYLIFY
                     SNETFREKNKKILLEEKNKIEKALKIHFNDLEELY"
     gene            complement(17415..21965)
                     /gene="rpoC"
                     /locus_tag="ACJE1S_000247"
     CDS             complement(17415..21965)
                     /gene="rpoC"
                     /locus_tag="ACJE1S_000247"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HGG0805826.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENAGDAYYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTNNEDAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKMGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIIKSILPDFVTENMWNKVLKKKDIAALVDHVYKQGGLQ
                     TTASFLDKLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKTTNNTLSRDMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITVEDCGTHEGVEINEITADSSIIETLEERILGRVIAEDVIDPITNSVLF
                     TEGTLMDEEKARILGESGVKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKDI
                     VANRRNAAILLVEPKIKAPFKGIINIENIHEDVIVSIKDKKQEAKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGAEVEENESIVEMIKEGWNVPNRIPFASEILVKDGDPVVQ
                     NIKAGEKGILKFYILKGDGLDRVRNIKKGDIVKEKGFFVVVADENDREAKRHYIPRES
                     RIEFNDSEEVNFDSIIASAPKQEKSVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSADE
                     QIDEATGKRSLVINEYLPSGVRPTLIIAGKGDKAVRYQLEPKTVIFVHDGDKISQADI
                     LAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERLIIQ
                     AEDGTSAEYLIDKSKHIQVREGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEI
                     QQVYRGQGVVISDKHIEVIVSQMLRQVKIINSGHTKFIEGDLVSRRKFREENERILRL
                     GGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVIL
                     GRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(21958..26094)
                     /gene="rpoB"
                     /locus_tag="ACJE1S_000248"
     CDS             complement(21958..26094)
                     /gene="rpoB"
                     /locus_tag="ACJE1S_000248"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HGG0805827.1"
                     /translation="MCNMLDNKLRNRLRVDFSNISKQIEIPNLLQLQKASFDYFLNLE
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGIKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVVNKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFVKELRAKMLEICSIPRLVNEKEFIKNLSDEELLNYA
                     RDWSKGVKFATPVFEGVNIEEFAKLFEIAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(26205..26582)
                     /gene="rplL"
                     /locus_tag="ACJE1S_000249"
     CDS             complement(26205..26582)
                     /gene="rplL"
                     /locus_tag="ACJE1S_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HGG0805828.1"
                     /translation="MAISKEDVLEFISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     AAGAAAAAAEEKTEFDIVLVDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKADAEEAKKQLEEAGAKVELK"
     gene            complement(26600..27079)
                     /gene="rplJ"
                     /locus_tag="ACJE1S_000250"
     CDS             complement(26600..27079)
                     /gene="rplJ"
                     /locus_tag="ACJE1S_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HGG0805829.1"
                     /translation="MTRSEKVEIIAKLQEEFKISEAIVVCNYKGLSTKKLEELRNNAR
                     ENNVKVQIIKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVRALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(27228..27929)
                     /gene="rplA"
                     /locus_tag="ACJE1S_000251"
     CDS             complement(27228..27929)
                     /gene="rplA"
                     /locus_tag="ACJE1S_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HGG0805830.1"
                     /translation="MAKITKRLKELSQKIDVSKEYALNEAIETVRNLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLIE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNISTFIKAINKHKPAAAKGRYIKSAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(27987..28412)
                     /gene="rplK"
                     /locus_tag="ACJE1S_000252"
     CDS             complement(27987..28412)
                     /gene="rplK"
                     /locus_tag="ACJE1S_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HGG0805831.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(28438..28971)
                     /gene="nusG"
                     /locus_tag="ACJE1S_000253"
     CDS             complement(28438..28971)
                     /gene="nusG"
                     /locus_tag="ACJE1S_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HGG0805832.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFAHLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(28985..29164)
                     /gene="secE"
                     /locus_tag="ACJE1S_000254"
     CDS             complement(28985..29164)
                     /gene="secE"
                     /locus_tag="ACJE1S_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HGG0805833.1"
                     /translation="MEKLITYFKLSKVELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWIMSSIVSAIV"
     gene            complement(29183..29258)
                     /locus_tag="ACJE1S_000255"
     tRNA            complement(29183..29258)
                     /locus_tag="ACJE1S_000255"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(29223..29225),aa:Trp,seq:cca)
     gene            complement(29270..29428)
                     /gene="rpmG"
                     /locus_tag="ACJE1S_000256"
     CDS             complement(29270..29428)
                     /gene="rpmG"
                     /locus_tag="ACJE1S_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HGG0805834.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNGKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(29481..30680)
                     /gene="tuf"
                     /locus_tag="ACJE1S_000257"
     CDS             complement(29481..30680)
                     /gene="tuf"
                     /locus_tag="ACJE1S_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG0805835.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGIVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(30741..30815)
                     /locus_tag="ACJE1S_000258"
     tRNA            complement(30741..30815)
                     /locus_tag="ACJE1S_000258"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30781..30783),aa:Thr,seq:ggt)
     gene            complement(30911..30987)
                     /locus_tag="ACJE1S_000259"
     tRNA            complement(30911..30987)
                     /locus_tag="ACJE1S_000259"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30951..30953),aa:Gly,seq:tcc)
     gene            complement(30994..31079)
                     /locus_tag="ACJE1S_000260"
     tRNA            complement(30994..31079)
                     /locus_tag="ACJE1S_000260"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(31043..31045),aa:Tyr,seq:gta)
     gene            complement(31140..31215)
                     /locus_tag="ACJE1S_000261"
     tRNA            complement(31140..31215)
                     /locus_tag="ACJE1S_000261"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(31180..31182),aa:Thr,seq:tgt)
     gene            complement(31350..32087)
                     /locus_tag="ACJE1S_000262"
     CDS             complement(31350..32087)
                     /locus_tag="ACJE1S_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG0805836.1"
                     /translation="MSILKIKNLQKYYGFHHALKNINLEVKQKEVVVILGPSGCGKST
                     LLRCINGLEEIADGVIEIGQDKIDKNFKDWTRVRQKVGMVFQSYELFEHLSVKDNILL
                     GPLKVQKRAKEEVLQEAKIWLEKVGLAHKIDAYPKELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVILNLAKDGMTMLIVTHEMGFARAVADRIIFMDNGEIIE
                     ENTPDGFFENPKSERAKKFLNLFDYHK"
     gene            complement(32089..32745)
                     /locus_tag="ACJE1S_000263"
     CDS             complement(32089..32745)
                     /locus_tag="ACJE1S_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0805837.1"
                     /translation="MFDLLNPDTLSRLWKGLYITLEISIVSIIITSFGGLFLGILMSL
                     KNRYIYILCRFALEFVRVMPLLVWLFMVYFGLSRWLGINLSSVSSAIIVFSIWGSFEM
                     MDLVRTSLKSIPKHQYESAASLGLNKAQSYFYIIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFNNKNDLAPFIIYGLIFFIFFLICYPVTLYSKKLEKKWS
                     "
     gene            complement(32738..33439)
                     /locus_tag="ACJE1S_000264"
     CDS             complement(32738..33439)
                     /locus_tag="ACJE1S_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0805838.1"
                     /translation="MDFDFILANSNAFIAAAWLTLKLSFFGIIFSIIIGFFCILMSYF
                     KITIMEAFCKVYIEFSRNTPLLIQLFFLYYALPKFDIHLEQIPPLNLICLSVDEALRP
                     AFACAIVGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRYVIMPQALGV
                     CLPGISANIVFLIKETSVVSIIALPDLVTVMKGLNSLTYKTDELLLLLFLGYLCIILP
                     ISLFLFFLEKRFSNV"
     gene            complement(33450..34046)
                     /gene="nssR"
                     /locus_tag="ACJE1S_000265"
     CDS             complement(33450..34046)
                     /gene="nssR"
                     /locus_tag="ACJE1S_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HGG0805839.1"
                     /translation="MQEYLDFLKGIGKIRKFEKNNILFFEGEKALKFFILLKGRVRVY
                     KSTAGEKEITLHYFTPPNFIAEMPTFKRLRYPANAICEEYCEILEIDFEDFETLCSQN
                     KEFNFLLISSLFEKIKILEKKLLENSLDLKSKLARYLLENEKNLAQISQRQIAVDLSV
                     RAESLSRILKEFKNSELIETKKGKIEILDKEGLKKGLW"
     gene            34128..34514
                     /gene="ctb"
                     /locus_tag="ACJE1S_000266"
     CDS             34128..34514
                     /gene="ctb"
                     /locus_tag="ACJE1S_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HGG0805840.1"
                     /translation="MKYETINQESIAKLMELFYDKIRKDKDLGPIFNNAIGTSDEAWK
                     EHKAKIGNFWAGMLLGEGDYIGQPLKKHLDLPPFPQEFFGIWLGLFEESLDKIYNNEE
                     MKNVILQRAQMIASHFQNMLYRFGGH"
     gene            complement(34517..36331)
                     /gene="recG"
                     /locus_tag="ACJE1S_000267"
     CDS             complement(34517..36331)
                     /gene="recG"
                     /locus_tag="ACJE1S_000267"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HGG0805841.1"
                     /translation="MKIKENDFDFFKKLKIKSAIDLALILPKKIENLSPSKTPKENEL
                     CTQKIIIKSIHSKKGQLFGLGFCKEWSQDISFVFFHPRAWHFGICKIGKELILNGKLT
                     RFGHVWQFNNPKILTSFAGFAPKYQIQGLQDKKISEFIHKYLNYENLKESGIEDKYIH
                     FLLNLHTYDEKSFLMFENLERFEKDLKYIEIYNFLKRLKAKKSHFKAYEIEIFNIANW
                     LKNLPFSPTRDQLNALKDIEQDLGSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILANQLYEEAKKLLPEFVDILFIKGGKKEKDLEEKIKKANLIIGTHALIHLQ
                     SHNAVLVMIDEQHRFGSAQRQQIYSLNENELAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKEMPFKKDITTLCIQNEGFAKLSEKIKEEIAQNHQIIIIYPLVNPSDKIPYLSLEQ
                     ARRYWEDNYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSTIVIVG
                     AERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFIQHGNEFKYFDFSKDEYILEKAKKDLMEI"
     gene            complement(36321..37541)
                     /locus_tag="ACJE1S_000268"
     CDS             complement(36321..37541)
                     /locus_tag="ACJE1S_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M16 family metallopeptidase"
                     /protein_id="HGG0805842.1"
                     /translation="MQNLEVSRVKIPFIFEENNDFPIVILKLVFRNCGRSYDEIAGLA
                     KMFARILNEGVDDSFFKELEFKAVNLEASSGFESLEINLSCLKENFEFALKHLENLLL
                     NPRFEEKILEKLKINALGELASKNSDFDYLAKNLLNSEIFECKEFQSPNDGDEKSIKQ
                     ISLSDLESFYKKNINLSNLVVILGGNLAQEKAKGLLNKLLAKLQKGSQNSQKTYEINS
                     KNKDIIQIRKESEQAYIYFAAPFFTKFNDKDFYLAKIALFILGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNASFTRVFGYLQTKNESAKEAKKIVKEVFRDFVKEGVSQNELVQA
                     KNFLIGSTPLRYESLSRRLSISFNEYYQGLPKGYYKEELKLIEKVELQELNAYIQKHN
                     EILDLNFASIANEN"
     gene            complement(37541..38587)
                     /locus_tag="ACJE1S_000269"
     CDS             complement(37541..38587)
                     /locus_tag="ACJE1S_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HGG0805843.1"
                     /translation="MKRLDKEEALYLLRNANLAELGEIAYQRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISISEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRRAHEIGMKSTATMMFGTVESDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSENTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIKSLGEN
                     PAKRNTAYEILERF"
     gene            38659..39846
                     /locus_tag="ACJE1S_000270"
     CDS             38659..39846
                     /locus_tag="ACJE1S_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805844.1"
                     /translation="MNYIDLLKNNKNIRILTLVQFIVYFGAWFSQTGVFTLLVSLNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELVSIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILNPKELKLANEMHSVIWAVSYTASMASAGI
                     FINFFGIKAAFLFDCCLIIIGILFLTKLHIPHFKQKIQNKFFILIKEGFLYVLQNKII
                     LHLIILHAFIGLTAYETLVTLLAQHEYKEVLSAALVIGFLNAIRALALAFGPIFLSKI
                     TNNKNVFFLYLGQGLGIILWALTQFNFYISFIGLIAAGFCTSSLWAYTYTMIQKNCDK
                     TYYGRVIAYTDMVYLSFSALISQLMGLLFEQGFKLAIITALLGMVFIFAAFYWRWFNK
                     KYL"
     gene            complement(39873..40961)
                     /gene="nusA"
                     /locus_tag="ACJE1S_000271"
     CDS             complement(39873..40961)
                     /gene="nusA"
                     /locus_tag="ACJE1S_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HGG0805845.1"
                     /translation="MERIADIIESIANEKNLDIESVKEKVIIALINTAKRIYGQEYDF
                     FVDRKNLNLYQKITVVADNDERLNENKESYIEFSKAKKEAPDVEIGDELTYECSLENL
                     GRTAVNILHKELEYHIQKLLEQTIFEKYKNKVGQMVFGNVVRIDNEENTYIEIDELRA
                     FLPRKNRIKGEKFKVGDVVKAVIRRVYTDKGIKMELSRTSPKFLECLLEAEVPEIKDG
                     YVSVVKCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFS
                     NEPEILIARALAPAIVSSVKIENEKAIVTLNSEQKSKAIGKSGINIRLAGMLSGYEIE
                     LNEVNARTTSNTLSNEEALKNLQDLFKI"
     gene            41086..41328
                     /locus_tag="ACJE1S_000272"
     CDS             41086..41328
                     /locus_tag="ACJE1S_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HP0268 family nuclease"
                     /protein_id="HGG0805846.1"
                     /translation="MDLKLARNLINEEPKNISLAKIEEAVNQEGQKFFYFDKENSHKD
                     LIALVEHFEKKGLSVYHRTIRYGLDSNDFMYEVHIL"
     gene            41325..42626
                     /gene="miaB"
                     /locus_tag="ACJE1S_000273"
     CDS             41325..42626
                     /gene="miaB"
                     /locus_tag="ACJE1S_000273"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HGG0805847.1"
                     /translation="MSSKKLFIQTLGCAMNVRDSEHMIAELTQKDNYTLTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKSGAKIGVCGCTASHLGSEIFRRAPYVDFVL
                     GARNISKITQAVNTPKFMSVDIDYDESEFAFGDFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPLNIIYKEAQKAVDKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFAKNPKVCKSMHMPLQSGSSQILKAMKRGY
                     TKEWYLDRALKLRELCPNVSISTDIIVAFPGESDKDFEETMEVLEKVRFEQMFSFKYS
                     KRPLTKAATMPNQIDEEIASNRLSTLQARHNEILDDIVKKQENKTFKVLFEELRAGNA
                     IVGRTDNNFLVQVEGSEELLGTFKEVKITNAKRMVLYGEII"
     gene            42610..43233
                     /locus_tag="ACJE1S_000274"
     CDS             42610..43233
                     /locus_tag="ACJE1S_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG0805848.1"
                     /translation="MGKSFKIAFIARLVFILQWLIFLTCKKTYKGDKVDQISNVILFW
                     HGRLALMPFAFRHFGKKGKKAYVMISHHRDGEQIARIIKLFGLDTVRGSTSKGASTAL
                     RSAFKILDENHDVVITPDGPRGPYRSISDGAVLLAQKKNVKIRILNYEARNFWEFKSW
                     DKMILPKPFTHLVYRLSEPLDISSLDKDQAKFFLLEHFKKIEQMDKF"
     gene            43242..44228
                     /locus_tag="ACJE1S_000275"
     CDS             43242..44228
                     /locus_tag="ACJE1S_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HGG0805849.1"
                     /translation="MLFLLKKILPQLFTSIILEDKKNILKTSIYKNHKLISSNEKTFD
                     KSEKLLEYVKALNSKFLFYHTALFLNVKEQGLIPSKNDKDFERFNVGKMSLKSIALNN
                     ALIYTATEHIEYFNELFEDYGGLDFLYSPFAILYHNILKEKPNSDKITLYAYKHEHIL
                     TLIICRGIEILYGDIIFFEEELDLEFGHQEENLDNLGEDTLNDTEVTLDNFNETLEDK
                     LNALDQFDNILGNNENDSEFLDGKDKFDLEEMDQFGNDIELCRHIVTSIEKFYKDDKY
                     PSAFIDKALILSAKELDQSAIEFLEEETLLEIESKPINTLDSIIELMQKELQ"
     gene            44225..44749
                     /locus_tag="ACJE1S_000276"
     CDS             44225..44749
                     /locus_tag="ACJE1S_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805850.1"
                     /translation="MKSYSFIQPRKKPIFTLFDKIWFGLFSFGIVFIFAVYFLYLTQI
                     ALTHNFIEEQKEQVLQFQNKTQENGKLYDILLEQSKIANTFHTQNQAFKNSLKNLFDI
                     IVKTDGITLESIEQEENSLKLIGVTPTKEMFALLLETPLKSIFDQSFTTYYRLNNGWY
                     RFISISKQNSGVLQ"
     gene            44746..45264
                     /locus_tag="ACJE1S_000277"
     CDS             44746..45264
                     /locus_tag="ACJE1S_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805851.1"
                     /translation="MKDKSLEELNILKIVIYVLSFITVCTALILFLLLPVLKDYKQTH
                     LRKNSQAAIFNAAKAKLDTSENKISALRTENNKSLEQFEQQFNLTHFQNFLEKYFENI
                     QITELKLDKKEKYLTHRINIRASINNPRRLYDFIDALAQYNNLVKIDYPMTLKASDHG
                     IMINLNVQIYSN"
     gene            complement(45256..46548)
                     /gene="thiC"
                     /locus_tag="ACJE1S_000278"
     CDS             complement(45256..46548)
                     /gene="thiC"
                     /locus_tag="ACJE1S_000278"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HGG0805852.1"
                     /translation="MKTQMLYAKEGIFTKEMEIVAQKEEVSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGLGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFGIEAIMDLSNYG
                     KTSRFRDELIAVSKAMIGTVPVYDAVGFLEKDLKQISARDFLDVVYHHAKSGVDFMTI
                     HAGINSRAARVFKESKRLTNIVSRGGSVLYAWMAMKEAENPFFEYYDDLLEICLKYDV
                     TLSLGDALRPGSTHDASDAAQISELIELSLLTQRAWEAGVQVMIEGPGHMAINEIEAN
                     MQIEKRICKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAAAGADILCYVTPAEHLRL
                     PNLNDVRDGIVATKIAAHAGDLAKLPKERKRDDEMSKARQDIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQVLKGENVSLV"
     regulatory      complement(46593..46697)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(46720..47481)
                     /locus_tag="ACJE1S_000279"
     CDS             complement(46720..47481)
                     /locus_tag="ACJE1S_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HGG0805853.1"
                     /translation="MSLQQVDQIISILSKQSKPYEWVIKEFKKIEELKDYELDLETFE
                     LLGLGLTLDKNNIFTLQTRTKKIKEEIFCIVDIESTGGIKNGQILEIGAVKIKNLQEI
                     DRFSSLVQVKEIPENITELTGINLDMVKDAPSLTKVLNDFRLFLKDSIFVAHNVRFDY
                     GFISKALNECGFGILLNRRICTIEFAQCCIESPRYKLDVLKELLGIKNAHHRALNDAL
                     AAAEIFKHCLGKLPYHIKTTEELINFTKTSRIKQK"
     gene            complement(47478..48125)
                     /gene="rpe"
                     /locus_tag="ACJE1S_000280"
     CDS             complement(47478..48125)
                     /gene="rpe"
                     /locus_tag="ACJE1S_000280"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HGG0805854.1"
                     /translation="MYVAPSLLSANFLKLEEEIKAIDEAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTITEIPLDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAHPIRLCEYI
                     RSQGIHPAIVLNPHTPINSIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKIKELRRL
                     IDEKNAKVFIEVDGGVNGLNASDLEAAGADILVAGSYIFSSNDYKTSISSLKLEF"
BASE COUNT        15720 a         9203 c         6430 g        16801 t
ORIGIN      
        1 cttctctata attcaaattt actagcatta aaataaaaat ttggggctaa accaaaacaa
       61 taaaaaagaa ttcttgcaag ataataaaga aaattttgat gatttagtaa aagttttttt
      121 aaattaaaag tagaaattat ctagtattaa aaaagcaatt gcgttttaaa atagcctaaa
      181 agctcttctt tggctttgaa gatatcatca gtgtttagct caaaatctat tttttgtggc
      241 tttttataac tcttatcata ataagccaaa agcaaggcaa taagcctttg ccattctctt
      301 tgctcataac tttttagcaa atcctgacga agatttacac tgatataagg actgatctta
      361 gcaagacatt ctttaaattt caaaggagtc attttttctt gatagatctt ttgtatcctg
      421 tctatgcgct tttctaaaga acaaaaacaa tgaattttaa atgctttttg cattttttca
      481 taaagcttta aaggcaaaac tatttcgcct attttacgac tttcactctc tataaagata
      541 aaatctttta aagaatttaa agtatgaaaa aggcttgctt caaaagcttt ttgcgtaggt
      601 tgagtaccta aaatatcgcc aaaagaagag cctagatgat ttgccatttt ttctaaattt
      661 aaatgatggg gtaaaagctc caaaagctct gtttttccac agcctgtatt accacaaaga
      721 gcaaaaaaat ctaaatttat ttcattatca aaataatgtg ctaaaaaact tctataagct
      781 ttaaagccac cctttaaacg caccactcta tagcctaatt cgctcaaaat cactgcgata
      841 gattttgaac gcaaaccccc acgagaacag taaattccaa tcttatctcc tatgcggaat
      901 ttttgagtaa gctctaagat atgctttgac atattttgac aaatataact cgcaccccta
      961 gccttagcta aagcttgatt tttcttataa attgttccta tttcttgata ttcttcatca
     1021 tttaaagcat aaaaattcaa cgcccctatc aaatgagaat gtaaaaattc cctagggctt
     1081 cttgcatcga ttaaaagaga gaaattttct ttttgaaatt ctgtaaattc aacttcactg
     1141 agcattttta aaagccaaaa caagtttttg ataaacttgc tcgatattag cgccacaaac
     1201 cctagtttct cctatagtgg tgataaaatt agtatcccct gcccaacgcg gcactagatg
     1261 ataatgacaa tgaaaagcta tgccagctcc tgcatcttta cttaaattca taccgatatt
     1321 gaccccattt gcatgaattt gctcttttaa aattttcact cccaaacgca caaaatggct
     1381 catttcttgc caaatttcat cacttaaatt ttctatatgc tcttcatgca aataaggtat
     1441 tatcataaaa tgccctgcag aataaggata gcggttcatc acgccaaaac aatacttagc
     1501 tctaaaaatc actcctaatt cttcgtcgct tttgatttta ttagcacaat cacaaaaagg
     1561 gcactcgctc ttttcttttt caaaatactc acttcgccat ggtgcataca aatactgcat
     1621 ttttatcctt ttaaagcaag gctttcaaag cctctccttc atcgttttga cgcataaaat
     1681 attctccgat taaaaaagca tcaacgccta aattttgcaa atgccttaaa aaatctttat
     1741 tctctaaacc actttctgcg ataataattt ttgaatttgg aatttgtggg atgagttttt
     1801 cgcataaatt catatccata gaaaaatcat ccaaattgcg atgatttatg cctataatat
     1861 cagctcctga aaaaatcgct ttgctcaaat cttctttatc gtgaatttcc accaaggctt
     1921 caagtcccaa atgtcttgta aattcaagca atcttttaag ctctttcata cttaacattc
     1981 tagcgataag caaaacaaaa tccgccccat aaaccaaagc ttctaaaatt tgatactcat
     2041 caaaaataaa atcctttcgc aacaaaggag cgtgcgtata acggcgtatc atgctaaggt
     2101 attctaaact cccttgaaaa aaatgcggtt ctgttaaaac tgaaatagca gtagctccat
     2161 ttttttcgta ttttaaagct atatctaaag gatcaaaatt ttcccttata acccctttac
     2221 ttggactagc ttttttaacc tctgcgataa ttcttacttc attttctatt ctttttaaag
     2281 cagctttaac atctttagga aaaaaaggat tcgatgctaa agatcgtccc aacatatcat
     2341 aaggcagttg cgccttacgc tcttttaaat cttctttagt tttttcaaaa attttatcta
     2401 aaatcatggt ttaatacacg cctttattgc ttttgcatga gccttgctct catcagaatt
     2461 tgcaaattct ttatcctcta aagtttgctt caaaatttcc caagcctttt tacaatcacc
     2521 ttgtttataa tacccccacg ctaaagaatc caaatagtat aaattttgag gctctttttt
     2581 taaggcaagt tcaaccaatt tcataccttt tttaagatct aaatcataat ctatcaataa
     2641 atacccataa taattcaaat acaaagcatc actattttca tcaatcgcat tagaaaattt
     2701 ttcgctcaca agagcaacaa cctgcggagt gattttttta ttcaaatttg cttcttcaaa
     2761 ttcaaacact gctgcacgca aaagatattc tttctcttga gtgcgtttat aaatttgcat
     2821 actaagatct ttagccttgt tgtataattt taacctttga tataaataaa gcttcatatc
     2881 atcatctgca ttatatttta aagcaaaatg caatgcttct ttgtctttgt tttgagaact
     2941 taaaagctcg ataagagcta ggataaagct tttgtttttt gtaatattat aaagctctat
     3001 ataaatttct tgtaaagctt tgctattgcc cttatcatta taaatctttg ctagtaaaat
     3061 gcaagtttta agagtgcaac cattaatatt ttttgaattt tctagtatat ttttaatgct
     3121 tgaagtatca tttaatatag cataaacacc cacgagctta aacaaaatct cctcgttttg
     3181 aacttgatta taggctagtt gataatattt tatggcatct tttaaattat tttggcgtat
     3241 taatacatct ccataaagct ctaaatttct tggatcatca ctttttttct ttaaaagccc
     3301 ttggataagc tcttgagctt ctttaagatt ataagaattt aaggcataaa gtgcactaag
     3361 acgcttaaga ttatcactct tatcaagata aggcttggct atattattta tctcttcttt
     3421 tttatcaagg ttgtttgcta gagttagcaa aaatgcattt tctaaaaaat tagtaatatt
     3481 ataatctcta aaaagtgcca aaaactcatc cctagcttct tcatattgat taaaatattc
     3541 ataattataa gctttcatga tccttaaatc aaattcattg ctcttttgct gcttataatc
     3601 ggggtaagct ataatcgttt ttgaagcccc acacgcagtt aaaaaaaagc ctattaagac
     3661 aaataacaaa ttcctataca ttcttttttt agctcctctt gatgtgtttt aaaatattcc
     3721 caaaaaggaa aggtgcggca ttgcttcgga cgaaaatcat aaatagagca atttcttttt
     3781 tccttatcga aaaaaataca tgcaaatcca tcttcaaatt caacttcctt aaaactcatt
     3841 ctaaagccta ccttttttaa atatttcaaa gcaaattctt tttcatctaa ttgcaaatgc
     3901 tctctcaaag cctttaactc ttccttgttt gcaaaaatat ttccactttc tcctgtgcaa
     3961 cattttccac cgcattcttg acaagcattt tcattaaatc cataagaaaa atctttatta
     4021 aatatcataa ctttccaacc taaatctaga gtgaatctct tgcatttgct cactcaaatt
     4081 ctcattttta tagataaaaa aagggggtaa aatctcacaa ggcgatttta cactttttct
     4141 agcttgcacc aagacaagtc ttgctgaaat attttgatga gtatgtacaa aacgaatttt
     4201 agttaatttt agctttttac tctctaaaac aaggcaaatt ttatctaaag ccaaggcttc
     4261 gtaacaaaaa tacaataccc ccataggttt taacaaagca ttggatctaa caataaattc
     4321 atttaaagtc aaatattttt gaaatttact tatattttta tgcgtatttt taccctcatg
     4381 cgccccatct ctataaaaag gtggattaca aactataaaa tcaaattttt tatcattttg
     4441 aaaatttcta aaatcttcat gcaatactcc agcttgtata ttattttgtt ttagattacg
     4501 atgaatgagt tctatatttt cttgttgtat atcaagcaaa gataaatcta aattagaaac
     4561 aaatttttta agtaaaattc ctataatacc acatcccgaa cctacttcca agacttgatt
     4621 tttaataccc atttctaaaa caaaatcagc taaaagtaaa gaatcgctgt tgtaacgata
     4681 accatcactc aattgggcta atttaatact atcttgcatt ttcaatgggt tggaatttta
     4741 attcttttta aaggagtatt ttctttgctt gtgttttgtt cttgttttaa agcattattt
     4801 tgacttgcaa aatctataaa attttgagca aaaagtaagg aagataatga tattgtgaaa
     4861 aaaaatttca acataatttt ccttgaaatt tatattctat ttaagtttat ttaaaaaatt
     4921 taaatggtgt ccacggcgag attcgaactc acggcctcaa aattaggaat tttgcgctct
     4981 atcctgctga gctacgagga cagaaagcgg gaaaaatccc gctaaaaatt taaccgtttc
     5041 tttttttgat gatttcatcc gcaacatttt taggaacttc atcataatga tcaaattcca
     5101 tagaataagt cgcacgacct tgagtttgac ttctaagatc agtagaataa ccaaacattt
     5161 cagccaaagg acaaaatgct gtgatgattt tatttccacc acgctcatcc atgctattta
     5221 cttgaccacg gcgtttgtta agatctccaa taacatcgcc catgtaatct tcaggagttt
     5281 ctacttcaac tttcatcata ggctctaaga tcacagcacc tgcttttcta gcaccttctt
     5341 taaagcccat agaagcagca agtttaaacg ccatctcaga tgaatccacc tcgtgataac
     5401 ttccatcata aacagttact ttaacatctt ccacaggata acctgctaaa acaccatttt
     5461 gcaatgcttc ttgaacacct ttatcaactg ctggaatata ttcttttgga attactccac
     5521 ctttgatatc attaacaaat tcatatccac tacctggctc aagtggttca aggcgtaaga
     5581 atacatgtcc atactgacca cgaccacctg attgtttagc gtatttgtat tcttgttcaa
     5641 cagtttttct aatagtttcg cgataagcaa cttgtggttg acctacttca gcttcaactt
     5701 taaattcacg aagcattcta tcaacgataa tttcaaggtg caactcaccc atacctgaaa
     5761 tgatagtttg gccactttct tcatctgtag aaactctaaa acttggatct tcttgtgcta
     5821 atttatttaa agcaatagac attttttctt gatctgcttt agtttttggc tcaactgcaa
     5881 cagaaataac tggatctgga aaatccattc tttcaaggat taccttatct ttttcacttg
     5941 caagagtatc ccctgttaaa gtatctttaa gtcctacaac agcaccaatt tctcctgcgt
     6001 aaagcacttt aatctcttct cttttgttag agtgcatttt taacaaacga ccaattcttt
     6061 cttttttatc tttagttgag ttataagcat aagaaccact ttctaaacaa ccgcgataaa
     6121 cacgcacgaa agtaagttgt cctacaaatg gatctgtcat aattttaaat gcaagtcctg
     6181 caaactcgcc atcatcagtt gattttacag aaacttctgt accatcttca tactcacctt
     6241 tgatattagc aacttcatca ggagctggta aataagccac aacagcatca agtaaaggtt
     6301 gaaccccttt atttttaaac gctgtaccgc aaagcatagg aacaatagaa agacttaagc
     6361 accctgcttt aatccctgtt ttaatctctt caaggcttaa ttcttctccg cctaaatatt
     6421 tttccatcaa ctcatctgaa gtttcagaaa ctgcttctat catttttgtg cgatattctt
     6481 ctgccttttc tttaagttca gctggaattt ctttttctac ataatctgtt ggcttagtat
     6541 catcttccca aactaaagct ttcatagtta caagatcgat tacgccttta aaattatcct
     6601 cagcaccgat tggaatttga agtggaactg gattagcttt taaacggttg cgaatttgat
     6661 cttctacatt gtagaaattt gcaccgattc tatccatttt gtttacaaat actattcttg
     6721 gaacaccata tttatttgct tgtctccaaa ctgtttcact ttgaggctgc accccaccca
     6781 ctgaacaaaa taccgcaaca gcaccatcaa gaacacgcat agatctttca acttctatgg
     6841 tgaaatccac gtggcctgga gtgtcaataa gattgatttg atgatctttc caaaaacaag
     6901 ttgtagccgc agaagtgata gtaatcccac gctctttttc ttgttccatc cagtccatag
     6961 ttgcagcacc atcatgcact tcgcctattt tatgactcat acctgtaaag aaaagaattc
     7021 tctcacttgt agttgttttt cccgcatcaa tatgtgcagc aataccgata tttctaaccc
     7081 tttttaaagg agtacttcta gacatttttt ctccttctta ccaacgatag tgagcaaatg
     7141 ctttatttgc ttcagccatt ttataagtat cttctttctt cttaaatgaa gcacctttgc
     7201 tattagcagc atctaaaagc tcagctgcaa gtttatctat catagttctt tcacttcttt
     7261 ttctagcaaa agaaataatc caacgaattg ctaaagcttg ttgtctagca ggacgaacct
     7321 ctactggaac ttgataagtc gccccaccta cgcggcgaga ttttacctct agcaaaggtt
     7381 taatattttc aatcgcatca ttaaagatat caataccttt tttttctcca ccttttttat
     7441 cgataagttc taaagcacca tacataatcg tagtagctgt gcttttttta ccatcataca
     7501 ttaaagaatt aataaatttt gtgattactt tgttaccata aatcggatca ggcaagactt
     7561 ctcttaccgg agcttttctt cttctcatta tttttccttc aaattttaaa ttttactcaa
     7621 acaaaatcaa atctaacgga tttgtctgtc taaaaaatta cttagcactt gctttagggc
     7681 gttttgcacc atatttagaa cgagaaactg ttctttttgc aacacccgca gtatcaagcg
     7741 caccacgcac gatgtgatat ttcacacctg gtaagtcttt taccctaccc ccacgcacta
     7801 aaacaatgct gtgttcttgt aggttgtgac cttcaccgcc gatatagctg atcacttcaa
     7861 agccactagt aagtcttact ttggcaactt ttcttaacgc tgagtttggt tttttaggtg
     7921 ttgtagtata aaccctagtg caaactcccc ttctttgtgg acaattttta agcgctggag
     7981 atttagattt ttctaaaact tttttgcgct cttttctaac caattgattt atggtaggca
     8041 caataattcc tttctttaaa aaatataata aactttagat gatatctaaa ttttacttac
     8101 aaaaatataa actagagatg ttttagtagt gactaaaatt aaaaatccta tcccatctaa
     8161 aactagatga gataataaaa ttattgttta ttagtattat actgcaaata taccacatgg
     8221 gtagctaaat attcttcaag accatgtttt ccatcagctc cgcctatgcc actttttcta
     8281 aagcctgcat gaaaaccttg catagcctca aaattttcac gattaatata agtttcacca
     8341 aatttaattt ctctgctagc tctcattgct atatctaaat tttgtgtata aatagaactt
     8401 gtaagaccat attcacaatc atttgccata tcaatagctt catcaagtgt atcaaattta
     8461 gcaataggta aaatcggagc aaaaatttct ttttgcatga tctcatcttc gtgtttaaca
     8521 ttagtaagaa cgcttgcggg aaaataatac ccacttgtat cagtgatttt tccaccgcat
     8581 tctacaatcg ctcctttagc tgtagctctt tgaagcattg ccaaagcatt atcaactcct
     8641 gcttgattga ccaatggtcc catatcaaaa tcacctttta aggtatttcc aacacttact
     8701 ttactcatgg cttttacaaa tttgtctaca aattcatcat aaatgcttgt atgcacataa
     8761 gctctttcag cacaattaca aacttgtccg ttattgcaaa ttctacttgc tttaatcgct
     8821 tctactgcta aatcaatatc cgcatctttg cacactatag ctggcgcctt tccaccaagt
     8881 tctaaagaaa ctttgataat atttttagct gcagcttcca ttactctagt ccctgcttca
     8941 acacttcctg taagacttac catacctata ttttcattgc ttgataattc atatcctact
     9001 acactgcctt tacctgcaac taagttaaaa acaccttttg gtaaagaact ttgcgaaaca
     9061 agctttgcaa attcaaaagc attgtttgga gtttcactgc ttggctttat aacaatagta
     9121 tttcctgtta gtaaagcagg tgccatcttc cttgcgatta agaaaaatgg aaaattccaa
     9181 ggtaaaattc caccaattac cccaatagca cttttatata aatatatatg ctcattagcc
     9241 ctatcgcttt gtatgatttc accctcatat cttctagccc actcggccgt ataatccata
     9301 taatctgctg taaaattaat ctctatgcta gccaaaactc tggtttttcc ttgctcttgc
     9361 attaaaactt cggttaagaa attagcattt ttgcgtatta aactagctat ttcttttaaa
     9421 tgatttgctc tttcaatcgc tggtttagcc tcccaaactt tttgtgcttt tttggctgct
     9481 tcaatcgctc ttttagtatc ttctaaagaa gcgctagcta ctcttgaaat cacttctttg
     9541 gtagccggat ttaaaacttc gataaattct ccattatgtg ggataaactt tccatcaata
     9601 taatttaaat aagttgtcat tttttctcct tttttagtct aagtgaaata cttcttccat
     9661 atttagccat ttttgtcctg catagcctaa agatatttga caaggatctg ttactttcca
     9721 ccatttttgt gtgctttcat ctcttgccat tttagccatg tctgcttcaa aatcagcacc
     9781 tacatattca aaatatgcaa ataaatattc tccgaacaaa taaatggaat aattttgcat
     9841 attgcacttc ttaatcatct cgcaaacccc ttcataaggc tttgcgtgaa gatttttata
     9901 ttcctctatt ttttcctttt ttatctttat gatttggcca tatctttgca tctatcctcc
     9961 ttgtaaattg ataaagcatt ttgataaaat atcttattta agtttttgaa aattttactt
    10021 tctatgatga gtttagccca cttagctgga gctatttttg ccacaggata attgctacca
    10081 aatatgaatt tatcttcact aaaattttct ttaaaaaaag caaaaagctc ataaataaat
    10141 tcctttgagg tttgttctga aaaatcatct ggaaccgaaa gcttaatata taaatttgga
    10201 aattttttca aaagatttaa atctttttta tactcattta aacgatctat ttttggactt
    10261 cctagatgat ttaaaaccac ttttaaattt ggatttttat ttaaaaattt ttctaaaaaa
    10321 ctgagttctt catttttcat acaagcttca aaaggtatat tgaaagtttt taaaatttct
    10381 attttttctt caaaatctgc ttcaaatagt cttttagctt cttttttact cgtgtgcatt
    10441 acttccctaa aagagctaag ttcttcttta tattttaaat ccgctaaaca aagcaaaaga
    10501 ttatgaagct ttttttgctc taaagcaaat aaagcttcct tttctaaatc atcgctattg
    10561 gtttcaacat acatagcacc taaaaattca aatccttcat attcttcttt tgctctaaaa
    10621 aaatcataat tttgctctaa tttttcattg ccttttaacc atgaaatagg cattttatcc
    10681 aaatcccaaa gatgcaaatg tgcatcaaaa atcttttgca ttttaagcct ttatctttga
    10741 gccaacaaaa ccataccaag ccacatataa aaataaaggt gccattgcta aataccccat
    10801 acctgtgcca taatgatcat taataaaacc tataattaaa ggcataatcg ctccacctac
    10861 tatactcatt acaagcaaag aaccgcctag ttttacttga tttaaaggca aattctttgt
    10921 tgcaactgca aaaatagtag gaaaagagat agacataaag aaaaataaag caattaaaag
    10981 aatagtactt aaaaaaccac tcgtaaaata caagccaaag catatgagta cattaattaa
    11041 agaataaagt cctaaaattt tctcaccttt aatcactttc atcaaaggag tagaaacaat
    11101 acgtcctagc ataaatgcaa ccaaagctat agaaaaataa taagcagctt gcgcatcttt
    11161 taatccttca ttatgatcta ctacataatt aataaaaaac gcccctgctg caacttgatt
    11221 tgctatatat gaaaattgcg ctaaaagtcc taaattaaaa tgtctgtgtt taaaaacatg
    11281 tataggctta gaatcatctt tttgtttata atcatcactt accgcacttc cttctggaag
    11341 cttatttaga acaaaagcaa ttaaaatcaa aataacaata gcagcaattc ctacataaac
    11401 aagctgaaca ttacccatat tggctagcaa tgcagcttcg atttgctccg cactcgcacc
    11461 ctcttcttgc ttggtaatag ataaaaataa agctccacct ataataggtc ctacaaattg
    11521 tcccaaacca ttaaaacttt gtgcggcatt gattctaaaa cttgcatttt tttcatctcc
    11581 aagttttacc atgtaaggat ttgcactagt ttctaaagaa ccaatgccac aagctaaaac
    11641 aaaaaacgca aataaaaaca aatgaaaaga agctaaattt gtagcaggta taataagcaa
    11701 agcccctaca gcataaagtg ctaaaccgaa aataatcccc attttataag aatacttatt
    11761 ggctatataa cccgctggca aggctatgat aaaataagct ccaaaataag caaattgtaa
    11821 aaatccactt tcatgctggc taatgtgaag atgattttga aaatttttat tcattacatc
    11881 gataagccca taacttactc cccataaaaa gaaaagagaa gtcaccaaaa caatagctat
    11941 ttttatattc ttagaatcag tcatttttta ctccttaaat ttcatcccaa ttcaatgctc
    12001 tatccaaatg aacataacct ccatctggca ttaaaatttg tcctgtagta tgtgaagcca
    12061 aaggactaag tgtaaaaact gcagtatttg caatctcttc tatagtggta aaacgatgtc
    12121 ccaaaggtat agtttttgcg attttctcat attgctcttt agggttaggg aaattttgca
    12181 accatttttc ataaagagga gtcataactt cagctggtgc tatggcattt actctaacac
    12241 tatctttagc aaaagcacaa gcccattccc tagtaaaacc tatttgagca gcttttgccg
    12301 aagcataagc tgaagttctt ccttgtcctg tgatacctgt tttactcact atatttaaaa
    12361 tactgccttg ctctttttta atataaggca aacactcttt tgccatagca taataatgaa
    12421 aaagattgtt ttcgtaagat ttaatcaaat ctttagtgct tgtgttttca atatgcaaat
    12481 tatcatttgc acctgcatta tttacaaggg cataaattcc accatgtttt gtaacaactt
    12541 tttttataag ttcttcaatt tgttcataat tttttagatc aatttcataa aattcatagc
    12601 ttttgcataa attttttaat tcttcgtcgt gctctttagg catagatctt gaaaaaacta
    12661 caggaattcc accctccata gcccataatt tagcaatacc ataaccaatg cctttagcac
    12721 cacctgtaat aatacaaacc ttatttttaa tttttaaatc catttattct cctttatcta
    12781 atttaaagtc atttttaaat gcactaatat caatacgcct aaaactgcta ttaatgctag
    12841 tgttataagt ccaaactcaa ccccaaaatg attttctatg tatgttttta aagtcggtgc
    12901 gacaaaacca cctaaatttc ctaaagaccc tataagtgcg atagcagctg caccaccttt
    12961 tccctttaaa acttgagttg gtaaattcca aaatataggc tgaattacga taaaacctat
    13021 aacagccaag ctaataaaaa ataaaaatgg tgctaaattc gcaacaaaag tcgaagctat
    13081 catgcttaaa cttgctaata ataaaaataa aatcgcatat aaattccaag agcgtttttt
    13141 atccgccaat gaggtaaata ttggcaaggc gataaaaaca aaaatccaag gaatagcatt
    13201 taaaagccct acttcaaaac ccacatttat ttgcaatatt tgagctattt tacttggtaa
    13261 ataaaaaaga acgccataaa tgcttaattg tatgcaaaaa taaacaaata caaatttcca
    13321 tactaaaata tttttaaaaa tatccttgat agaataatct tttgccttgg aattacaaat
    13381 ttctatattt tttaataaaa cagttttttc ttttacatcc aaccatttag catcttttgg
    13441 gtgagagtca agataaaaca aacaaaaaac acccaccaaa acagtaattc cgccctcgat
    13501 taaaaacatc cactgccaat ttttaaaata catatttgat gcataatcaa gtataaaacc
    13561 actgattaaa gaaccaaaaa caaaagctat aggcacaccc atttgataaa ttccataagc
    13621 ttttgatcga tatatagctg gaaaaaaata actaagatac aaaataatcc ctggactaaa
    13681 acctgcttca gtcaacccta gaaaaaacct taatatataa aaacttgttt ctccttgtat
    13741 aaaaatcata gccatagtta caagtcccca agtgatcatt atgcgactta accaaatctt
    13801 agctcctaat ttatgcaaaa gtaaatttga aggcacttca aacaaagcat aaccaacaaa
    13861 aaatatccca gcacccaaag catacgcagt ttcgctaata cccgcatcca tttcgatgtg
    13921 agatttcaca aaactaatat ttgtcctatc aagcatagaa agacaaaaca tcaaaacaat
    13981 taaaggtaga atacgccaag atattttctt acaaaccagc tctaattttg ttaattttaa
    14041 atgccccatt tttagtccct aacaagttgt agcaagtctc caaactgaaa aatcattttg
    14101 ctcgtttatt tcagctttta ccaattctcc atctgaaatt cgcacgatta attctataag
    14161 ctcatcacgc acttcttctt ttgtttttac cccatctata atgcttcctg cgttaatatc
    14221 aatagcatca ttcatatttt cataacaaaa agtattagaa ctcattttaa ttgtaggcac
    14281 aatagcagaa cccgttggag tgccacgacc tgtagtaaaa acacaaatat ttgctccacc
    14341 tgcaaccata gcactaagtt gttctatatc attacctggc gtattcataa aagtaagtcc
    14401 tttagaaact ataggtttgg cataatcaat cacatccatt aaggttctgg ttcctgcttt
    14461 ataaacacaa cctaaggatt tttcctctat agtactaagc ccacctgcaa tgtttcccgg
    14521 actagggttt gctcctcgaa tatcagcacg aaaagacttg actaaattct cataacctaa
    14581 aatcttatca tatacctttt tagctatttc atcgtttttt gctctcttag caagtatagc
    14641 ttcacaacct ataagctctg tagtttctgc taaaattacc gcaccaccct catcaatgac
    14701 aaaatcactc aaacttccta aagcaggatt agcactaagt ccgctatagc tatcacttcc
    14761 accgcattct gtgcctaaaa tcaaatcact aaaatctcct tcactttttt gtaactttgc
    14821 ggcactttca agcatttcat tgactatttt aatacctttt tcaatagtat ttttactacc
    14881 accgcattct tgtatcacta aatattcaac ctttttataa ggcgttgctt ctttgatttt
    14941 ttctgctact actttagctt gtattacctc acaaccaagc cctacaatta aaacaccaaa
    15001 aacattggca ttgctcccat gacctatcaa aacatctctg gtttgcaaag catcaaattc
    15061 aagctgggag caaccatgct gatggttgat ataaaccgct ccattacatt ttctagctat
    15121 attttcacac actttattag cacaatgtac acttggtatg ataatgactt tatttcttaa
    15181 gccaaatttt ccatcttctc ttctatagcc cattatcttt ttcatattta ttccttatct
    15241 ccacgacctc taattcccgc agtattatgg atatgcaccc attcccctgt actaatatcg
    15301 caacttgcac tagctatagc ttctgcgtat ttgataataa tttcatcttt ttttatatcc
    15361 tttagtgcaa atttatgtcc gcttgcaata tcatttaaaa gctcaatatt tgccactttt
    15421 tcgccttttt taaagtcacg caaagctgtg gcaacattgt ctttttcatt gactataata
    15481 tatcctttca tagttttata cctgtttctt tttctatagt tttaataagc tcttttgctt
    15541 catcaaagcg agtgtttaat tcttcttttg tagcaggtga taaaggatga atactagcat
    15601 ttacaaattc aaatcctctg gcctttaaaa gcaaagcaaa acccatagga aaagctatgc
    15661 tcataccaaa tcttatggcc tttaataaac ttttttgtat tagcaaagct ctgcctatat
    15721 ttttttcatt gattgatttg taaatttcgc tcataagttc tggaaaaact ccacctatgc
    15781 tagtcataga accttttgca cctgctaata atgcacctac ataaaattct tctcttccta
    15841 caaaaacatc aaaattgcta ggtagcacat ctaaaatatg atttaaaagc aaagcatctc
    15901 cactactatc ttttatacca acaacattat caagctttga aactctttct ataaatttta
    15961 agcttagtgc tggtgcaaaa agaggtatat tataaacata caagggaagt ttcactttag
    16021 aagatagatc ttttacatat tcaaaaagcg catcttcact taatttataa taataaggca
    16081 tagcaagcaa caaagcatca agacctattt cataagcttt ttgtgccaaa gtaaaagtat
    16141 tttgataaat tgttgaagca atacctgtaa taatgggcac attatttttt gcaacttctt
    16201 ttgtgagtct cattaattta acttgttctt caatgcttaa agcttgagaa tctcccgcgc
    16261 ttccattaca aaataatcca tttaaacctt tagaaatacc aaattcacaa tagtgaataa
    16321 attctttttc attaatactt ccatcatctt tatatggagt aagcaaagcc ggtaaagttc
    16381 cttttaaaat tcccattttt attttccttt cgtatataca aaaatatatt tatatacaaa
    16441 aaatataaca aaatatttgt aaaaaatcaa attaagaata tggtgtaaaa ttcacattcc
    16501 atccttaata actaccgatt cttacaaaaa attatcgaaa tttatcaata aataattttt
    16561 ttattttgtg ttactaaaag taaaaattat gctagaattt ataaaaacaa aacaaggata
    16621 aaagcattat gcatcagcct actcttagag ttttaaatat tttagaactg ctggcaaaag
    16681 aaaaacttac cttaagtact atagccaaaa aactaaatat tccagctgga actctttggc
    16741 ctattttgca aactctacaa gaaaaacaat acatcagatg cgatttaaag aataaaagct
    16801 attatttaga ttttaaaatt ttagaattag gatacaatat aaaaagtgaa aatagtattt
    16861 ttgaaatgat taaaaaacat atgaaaaata taagaaattt aacaaatcaa acttgtcaaa
    16921 tgggaatttt aaaagaagaa aatgtgctct atttagaaaa aattgatgca aataatccag
    16981 tacaattaaa atctttcata ggcacctctt atcctgctta tgcaacttct ttaggcaagg
    17041 ctttattgtc caataaaaat aaagaagaat taaaaaaaat ttatccaaac aattttgaaa
    17101 aaatcacaga aaatacacta aaaaatatag atgaactcta tcaacaaatc gaacaaatta
    17161 aaaaagaaaa aattgctatt gaaagcggag aaatcaatcc gcaaattgaa tgtatggcta
    17221 taggtataga acataaaaac aaaataattg ccgctattag tatatcttat cttattttct
    17281 actctaatga aaccttcaga gaaaaaaata aaaaaatact tttagaagaa aaaaataaaa
    17341 tagaaaaagc cttaaaaatt catttcaacg atttagaaga attatactaa aatagcccaa
    17401 aaaagggcta taagttattc ttgttcttta agttttaaat tttgctcacc ataaagccct
    17461 gttccaacag gaatcattct acctaaaata acattttctt ttaagtcttc taagtagtca
    17521 aatttacccg cgatacttgc ttcggtaagt acttttgttg tttcttggaa tgaagctgca
    17581 gaaatcacac tatcactgcc tatcgctgct cttgtaacac ctaaaagtac aggttcggca
    17641 atagctggtt ctccgcccaa tctaagaatt cgctcatttt cttcgcggaa tttgcgtctt
    17701 gaaaccaaat ccccttcgat aaatttagta tgtccactat taataatttt aacctgtctt
    17761 aacatttgag aaactataac ctcaatatgc ttatcagaaa taacaacccc ttgacctcgg
    17821 tatacttgtt gaatttcaga aatcaagtaa taatgcaagg ctttttcgcc taaaatttta
    17881 agcacatcgt gacttgaaac tactccatca gttagctttt cacctgcgtg aataaattca
    17941 ccttctctta cttgaatatg ttttgattta tcgatcaaat attctgcgct tgtgccatct
    18001 tctgcttgga taatcaatct ttcttttgag cgtaaaggct tatcaaaacg aaccacaccg
    18061 tcaatctctg caattactgc tgcatttttt ggttttcttg cttcaaaaag ctctgaaacc
    18121 cttggaagac ctccggtaat gtcttttgat ttcgctgctg cttttggagt ttttgccaaa
    18181 atatctgctt gagaaatttt atcaccatca tgaacaaaaa taaccgtttt tggctccaac
    18241 tgataacgca ctgctttatc acctttacct gcaattatca aagtcggtct tactccgctt
    18301 ggtaaatact cattgatcac tagcgagcgc ttacctgttg cctcatcgat ttgctcatct
    18361 gcactataac ctgcttctat atcttcaaaa cttaccacac catcaatctc tgcaataata
    18421 gtgttattgt aagcatccca ttctgcgata actgactttt cttgttttgg cgcactagcg
    18481 attatagaat caaaattaac ctcttcgcta tcattaaatt ctattcttga ctctcttggg
    18541 atgtaatgtc tttttgcctc tctatcattt tcatcagcaa ctacaacaaa aaatcctttt
    18601 tcttttacta tatcgccttt tttaatattt ctaaccctat caagtccatc gcccttaaga
    18661 atatagaatt ttaaaattcc tttttcccct gctttgatat tttgcacaac aggatcccca
    18721 tcttttacaa gaatttcact tgcaaatgga atacggtttg gcacattcca accctcttta
    18781 atcatctcaa caatactttc attttcttca acttcagcac cgctttgata cggtaaataa
    18841 agctttccat caatgcttcc gctaacgccc gctaattcat ttggtttagc aagatcgtat
    18901 tttctaagaa tatattttgc ttcttgtttt ttatctttta tagaaacaat tacatcttcg
    18961 tggatatttt ctatattgat aataccctta aatggtgctt taatttttgg ctctacaagt
    19021 aaaatagccg catttctacg attagccact atgtcttttc cctctttatt tttataagtt
    19081 ttaagattat aaaatcttat aaaaccttct ttttgggcgc ttacctgtct atcttgtaaa
    19141 tctgtacttg cagttccccc gctgtggaaa gttctaagtg taagctgagt tcctggttca
    19201 ccaatagact gagcagaaat gatacctact gcctcacctg gtttaacaag cttaccttca
    19261 cctaggttaa ttccgtaaca ttttgcacaa attccttttt tagccttaca agtgattgga
    19321 gtgcgaatat ttacgctttt cacaccactt tcacctagta ttctggcttt ttcttcatcc
    19381 attaaagtac cttctgtaaa aagcacagaa tttgtaatag gatcgattac atcttcagct
    19441 ataaccctgc ctaaaattct ttcttccaag gtttctataa tagaactatc tgcagtgatc
    19501 tcattgattt caacaccctc atgtgttcca caatcttcaa cagtaatttt tacattttgt
    19561 gctacatcga taagttttct tgtcaaataa cctgcatttg ctgttttaag agcggtatct
    19621 gccaaacctt ttctagcccc gtgagttgag ataaaatact caagaacatt caaaccttca
    19681 cggaaatttg aaataatagg cgtttcgatg atcgaaccat caggcttagt cataagtcct
    19741 ctcatagcag caagctgaga aatttgagct gcactacctc tagcacctga atctgccatc
    19801 atatagatag aattaaagcc ttccttatct ttttcaacaa gcttcatcat atctcttgaa
    19861 agagtattgt tagtggtttt ccaaatatca ataattttgt tatatctttc acctgaagtg
    19921 atcaaaccaa gattataaga attttgaatt tctcttactt gctttttagc ctcgtcaata
    19981 gccttttgtt tatcattagg aacgataata tcagcgatag atatagaaat acctgcctta
    20041 gtcgcatatt caaaacctaa atttttaagt ttatctaaaa agcttgcagt agtttgtaaa
    20101 ccaccttgtt tatatacatg atccacaagt gcagcaatat ctttcttttt taaaacctta
    20161 ttccacatat tctcagtaac aaaatcaggt aaaatagatt taataataag tcttcctgct
    20221 gttgtagtaa tctttctacc atcaaccata gtttgaatgc tagcatgaat atcaaggcat
    20281 ttactttcaa gggccatcat tacttcatca atgcctgtgc atatcttatg tgaacctttt
    20341 gcacccattt tttccaaaga aagataataa attcctaaaa ccatatcttg agaaggtaca
    20401 gttacagact ttccacttgc aggcaaaaga atattcatag aagaaagcat taaaacctta
    20461 cattctgcga tcgcttcttg agaaagtggc acatgcaccg ccatttggtc accatcaaaa
    20521 tccgcgttaa atgctgcaca aactaaagga tggagttgta ttgccttccc ctcaactaaa
    20581 acaggatgga aagcttggat agaaagttta tgtagagttg gagcacggtt taacataaca
    20641 ggatgccctt ttaccacctc ttctaaacat tcccaaacct cattagtttt gttttctatc
    20701 atttttttag cttgttttac tgtagtggca taaccttttt cttcaagctt agccaataaa
    20761 tgtggcttga aaagttctaa agccattttt ttaggtaagc cacattgatc cattctaagt
    20821 tttggtccta caacaataac gctacgacct gaaaaatcca cccttttacc tagcaagttt
    20881 tgtctaaaac gaccttgttt acctttgata atttcactca aagattttaa cgggcgtttg
    20941 tttgctcctt taactgcatt agcacgacga ccattatcaa aaagtgcatc tacagcttct
    21001 tgtagcattc ttttttcatt tctgataata atttcaggcg catcaagctc cataagtttt
    21061 ttaagacgtg tatttctgtt aataacacgg cggtataaat catttacatc agaaactgca
    21121 aatttacccc catctaaagc aaccaaagga cgcaaatcag gtggcaatac aggtaagttt
    21181 gtaatcatca tccattcagg acgatttggt actgcatctt cgttatttgt atttgcattt
    21241 aaatttgaat ttaagaagtt ttctacaact tttaaacgct ttataatggt ttttttctta
    21301 gcttctgaat ttgtagcagc catttcttct ttaagctgat ttaaaagcgc cacaagatct
    21361 aaatttgcta gcaagtcacg gactacttcg ccccccattc ttgctttaaa gccactattt
    21421 tcataacgct gcatcaaatt ttgatattgt tcttcattta atacatcgca gtattctact
    21481 tttttggtgc tttcattatc ataatacgca tctcctgcat tttccacgat ataagcctca
    21541 taataaagta cgcgttcaag atccttcatt ttaacaccta gaagtgttcc tatacgactt
    21601 ggaagagaat taacatacca aatatgagct actggggtta caagttcaat atgccccatt
    21661 ctagagcgac gaacttttga atttgcaact tcaactccac atttttcaca cttaacgcct
    21721 ttaaagcgca tttttttgta tttaccacaa agacattcat aatctctaat aggtccaaaa
    21781 attttagcgc aaaaaagccc atctctttct ggttttaaag ttctataatt aatagtctct
    21841 ggctttttta cttcaccata agaccaagat ttaatttttt caggacttgc aagtctaagt
    21901 tgaaatgctt caaaatccct aggtcttgca tcttctttta tttctattac tttaaattta
    21961 ctcattatct tcatccttgt caaaaatctc aacatctaaa gctagagact taagctcatt
    22021 agtcaataca aaaaatgtct ccggaattcc tgttgctggg acattttctc ctttggtaag
    22081 cgctttataa gcactaaatc taccttcaac atcatcggat tttatagtaa gcatctctct
    22141 taaggtatga gccgctccat aagcttcaag cgcccaaact tccatttcac caaatctttg
    22201 tccaccaaag agtgctttac cgcccacagg ctgctgggta accaaactat aaggtccagt
    22261 acttctagca tgaacttttt catcgaccaa atggtgaagt tttagcatat acatacatcc
    22321 tacatgaact ctctcagcga ttttttctcc agtgcgccca tcataaagtt ctgttttgcc
    22381 atccatgtca atctttgcta tttcaaaaag ttttgcaaac tcttctatat tgactccctc
    22441 gaaaacagga gttgcaaatt taacaccctt gctccaatct cttgcgtaat ttaaaagctc
    22501 ttcatcgctt aaatttttaa taaattcttt ttcatttaca agtcttggaa tagaacatat
    22561 ttcaagcatt tttgctctta attctttaac gaaatctttt tgttttctgt caaaaatttc
    22621 ttgaatttga tcacccaatc taagccctac aagacctaag tggctttcta aaatttgccc
    22681 tatattcata cggcttggaa ccccaagtgg attgagtgca atatccacac tttttccatt
    22741 tggcaaataa ggcatatcca cttcaggtac tatagtagaa actatacctt tgtttccatg
    22801 gcgtcctgcc attttatcgc ccactttaag cttgcgtttt gttgcgatat acaccttaac
    22861 aagcttaatt actccacttg gtaagatatc atctttttct aaaatttcaa gtttttcatc
    22921 atgttcagct ttaagctttt tcttctcatt ttggaaatga ttttttaaat catcgtattc
    22981 tttttgaatc tctttagaat aagctttaat caaagttgtt aaagtaaaac gattgatttt
    23041 ttcaagttcg ctaatatctg cagtttgtcc ttttttataa tttttatctc caattttttg
    23101 atcgctattt aaaggggctt tggaaagaag agcacaaaca cgaagcattt cttctctatc
    23161 catcatcaaa agtctatcat gatgttcttt ttctaaagcc attttttctt tatcataaga
    23221 ttttattgcg cgatcatctt tttcatagcc ttttttagtg aaaattttaa catccacaac
    23281 aacaccctct aaagaagcgg ttgcataaag ggatttattc acaacatgtc ctgctttttc
    23341 tccaaaaatc gctcttaaaa gtctttcttc aggagttggt ttaacctcac cttttggaga
    23401 aaccttaccc accaaaatca tacctggttt gatatgggta ccaatttttg caataccgct
    23461 ctcatcaaga tgcgcaacat cttcttcttt tacatttgga atatctttgg taatttcttc
    23521 tataccgtct tttagttctc ttgcttcaat ttctttttca taaatgtgca cgcttgtaaa
    23581 tgtatcttca cgaataattc tctcacttac aactatagca tcctcatagt tataaccatt
    23641 ccaaggcata aaagcgatta aagcattttt acctatagca agttcgcctt gatccataga
    23701 aggaccatct gcgataattt gtcctgcttt tacgatatca ccttttttaa caatagggtg
    23761 ttgaatataa tttgtatttt gattggttct taaatttttc tccatagtgt aatggtcaat
    23821 aaatggacct ttatcatctt cacctaaaat gaaaatgctt ttattatcca ctttctcaac
    23881 cacaccgcca cgctttgctt taacagcttc ccaagcatca cgcgcaataa tttgttccat
    23941 acctgttcct actatcggag ctgaagcagt aagaagtggc acagcttgac gttgcatgtt
    24001 tgaacccatt agtgctctgt ttgcatcatc gtgctctaaa aacggaatca aagaagccgc
    24061 aaccccaaca accatacctg agcaaagatc gattaattgc acttcttcgc gtcttgcaag
    24121 tatagtttca ccatcttgtc tagcctcaac aaattcttct actatattgc ctttagcatc
    24181 aaccttagtt gaagctggtg cgataaataa gccttcttct tgtgttgctg taagataaac
    24241 aacttcatta gtcactttac catttacaac ttttctatat ggtgcttcaa caaagccaag
    24301 ttcgtttact tttgcataag tagaaagagt gttaatcaaa ccaatatttt gaccttcagg
    24361 tgtttcaact ggacaaattc taccataatg tgtcgcgtga acatcacgca cttcaaaacc
    24421 tgctctttct tttacaagtc caccttcacc aagcgctgat aaacgacgct tatgagtaac
    24481 ctcgcttaaa gggttggttt gatccataaa ttgcgaaagc tgacctcctg taaaaaattc
    24541 aatgatagtt gtagtaatca ttttaggatt aattaaatca taaggcatta ctttatcaag
    24601 atccgcattt aaagaagtaa atttatctct gatcgccttt tgcatttttg caagacctaa
    24661 atgaagttca ttagctaaaa gttcacctat agaacggata cgacgatttc ctaaatgatc
    24721 tctatcatca atatgtcctt taccattttt tactttaatt aaatattttg cagttttaat
    24781 aatatcttca ttagtcaaaa cagtaacata ttcaggcact tcaagaccta acttatggtt
    24841 cattttcata cgacccacct tagtaagatc gtatctttca ggattgaaga ataaatcatt
    24901 tacaaaagcc ttcgctgcat cttttaccac aggttcacct gggcgcataa ctttgtaaat
    24961 tctaatcgca gctaaatcat tttcatcatc gatattttca ctttgtttaa gaagttttag
    25021 agtttctcca tcttgagcaa aggagttaat aatcgctgca tcaacgccat tagccaagtc
    25081 atttgctata tcaaaacttt tttgctcttt aatcttagca agcttactct catctaacaa
    25141 agttaaagaa tcaaataaaa cctctccact ttctttatca ataataggat ttgctaaata
    25201 acgattaagt aaaatttcta caggatattc tatccatttt aaaccgtctt taataagctg
    25261 ttctgctttt ttctttgtaa gtctttttcc agcttgatga acgatttttc ctttttcatc
    25321 tttaatatca tattctattc tatccataaa atcatttggg ttaaattctg ttaaaaattt
    25381 atctttttta acgtgaatag tctgaatagg ataaaacaac ttaataatat cttgtttttt
    25441 ataccctaaa gctctaaaaa gcatagttac aggaactttt ctacgcttat tgattcttac
    25501 atacaaaaca tctttggcat cgtattcaaa ataaagccac gaaccacgat caggaataat
    25561 ttgagcagtg tatacaagct tattaacaac agtcgagctt tcttcttctt tgaagattac
    25621 gcctggactt ctatgaagct gattaactac aactctttca accccattga taataaaaga
    25681 aaccctatct gtcatcaatg gaatttctct tatataaatt tcttgttcct tgatatcttt
    25741 tataccaact ttttcacctg ttttctcatc tttctcatgt aaggtaagac ggattttcat
    25801 ttttaaattt acagagtaag tcaaacctct ttccatgcac tcacgaattg tgtattttgg
    25861 ttttccaatt tcgctactaa catactcaag acttaaccta ttttgtggat catggatagg
    25921 aaagattgat ttaaatactt tttctattcc actttcacca ttttcaagat ttaaaaaata
    25981 atcaaaactt gctttttgaa gttgaagaag atttggaatt tctatttgct ttgaaatatt
    26041 ggagaaatct actcttaaac gatttcttaa tttattgtct aacatattgc atatacctcg
    26101 tggtaaattt tgtaaattta aaaaagaaga cctaatatct aggtaaaaaa taaaaaagaa
    26161 gacttactta aataagcaaa tcttcttaaa cttttaaagc ttaattactt aagttctact
    26221 ttagcaccag cttcttcaag ttgtttttta gcttcttctg catcagcttt agccacgcct
    26281 tcttttaagg ttgaaggtgt ttgctctact gcatcttttg cttctttaag tccaagacca
    26341 gttaaagcac gaacgatttt aattacttcg atctttttag caccaccatc aactaaaacg
    26401 atatcaaatt cagttttttc ttcagctgca gctgctgctg cacctgctgc tgcaccacct
    26461 gctaccatta caggagcagc agatacacca aatttttctt caaattcttt tacaagctca
    26521 gaaagctcaa gaacacttaa atttgaaata aattctaata catcttcttt agaaattgcc
    26581 attttttatc ctttatttat tattcagatt cttttttatt tttaagcgca tttaaaccaa
    26641 tagtgaaatt ggtaattggc gcattccaaa cttgcaaaag catagcaagc aactcgttgc
    26701 gagaaggcat ttttgccaaa gctctaacct tagcaacatc tgcaacttcg ccttcaatat
    26761 gagcagtttt aatttcaaat ttatcattat tttcttcaaa tttagctgct acttttgaaa
    26821 cgctaagttg atcctcgccc caaagataaa tattagtatc tttaagaacc agacctgttt
    26881 taccggaatt attaagagca atgttagcca aagtgttttt aataatttga acttttacat
    26941 tgttttctct cgcattattt ctaagttctt caagcttttt agtgctcaag cctttgtaat
    27001 tacaaactac aattgcttcg ctaattttaa attcttcttg aagtttagca ataatctcaa
    27061 ctttttcgct tctagtcaca ttttctcctt tccgattgag atttcaagca gagtggtttt
    27121 acccaaatta agctttcgcc tcgactatct tcaatctaaa ataaacatct caaaaaataa
    27181 aaattttttc agatgtttat ttaaaaagag ttgcattata gcaactctta cttcatatca
    27241 agtaattctt gcgtttcaag ttttacagaa ggactcattg ttaaagacaa agctgcgctt
    27301 ttaatatatc tacctttagc tgctgcaggt ttatgtttat taatcgcttt aataaaagta
    27361 gaaatattat cccaaagttg ctctttagaa aaacttactt ttccaaggcc tgcatgaata
    27421 tttccttgtt tgtctacacg gaaatttact tgtccgcttt tagcattatt aactgcttga
    27481 gctacatcca tagtaactgt tccggttttt ggatttggca ttaaaccttt aggtcctaag
    27541 attctaccta ctttacccac aagacccatt aaattaggag ttgcgattaa tacatcaaaa
    27601 ttcatattgc ctttttgaat ttcttctatc aagtcatcac ttcctacaat atctgctcca
    27661 gcattttttg cttcatctgc cttagcatct tttgcaataa cagctacacg aactttttta
    27721 cctgttccag caggaagtac aacagaacct ctaaccattt gatctgcatg tcttggatca
    27781 acattcaatt taagtgcgat ttcaacagtt tcatcaaatt ttgcagattt taaatttctt
    27841 actgtttcaa ttgcttcatt taaagcatac tctttgctta catcaatttt ttgtgataat
    27901 tcttttaatc ttttagttat tttagccata tatttttctc cgcattttta aagtgctacc
    27961 gctttttacc ttagcggtaa aaggttttaa tctacgattt caacacccat agagcgagct
    28021 gaacctgcaa taattttcgc agcttgatct ctatccttag tatttaaatc tgcaattttt
    28081 ttatcaacaa tttctaaaac ttgggcacga gttaatttac ctaccttgtt cttaagtgga
    28141 ttatctgtac ctttagaaat tccagctgct tttttaatta aatctgtagc aggtggctgt
    28201 tttgtaataa aagtaaagct tttatcagca taaacagtaa taacaacagg aatattaaat
    28261 cctgccatat cctttgttct ttcattaaaa gctttacaaa attccatgat atttacacct
    28321 tgctgaccca aagcaggacc tacaggtggt gatggattag cttttgtagc tgcaatttgc
    28381 aatttaattt cgcctacgac ttttttagcc ataacaaatc tccttacttg atataaatta
    28441 aattattttc tcaacttgag aatacaagat ctctactgga gtagaacgtc caaaaataga
    28501 aacattaagt tttaataatc cacgaaccat atcgtattct tctactatag cagtaaagtt
    28561 tgcaaatgga ccttcagtaa ttcttacatt ttctccttct tcaaaagaga ttttaggttt
    28621 tggagcagca cgattatgca ctttttccaa aattaaatta atatcttttt ctgttaaagg
    28681 agtaggtttt tttgattctc caataaaacg accaactttt ggaagagatt gaatgcgatg
    28741 ccaaagttct gtatttaaat ctagatgtgc aaaaacatac ccagaataca aacttctttc
    28801 acttatcttc tcttttccat ttttaaattc aataacatct tcagtcggaa caactatttc
    28861 ttttagttgc tcttcgattc cattatcttt tactaaattt tcaatggctc ttttaactgc
    28921 catttcgcta ccagcataag tttggattgc ataccattta tgagtactca aattttgttc
    28981 tcctttatac aatcgcagaa acaatagagg acataatcca atccactaac gccaaaaaca
    29041 aagaaataac cgcaaccact acaaaaactg taatataagc atttcttacc tgttctttta
    29101 aaggaaaaat tactttcctt aattcgactt ttgataattt aaaataagtt attaattttt
    29161 ccatttattt aaaccttaat tatggcaggg caagagggat tcgaaccccc aaccatcgga
    29221 tttggaatcc ggtgctctac cgttggagct attgccctag ggcataagct taacttttta
    29281 gcttaacttc tttgtgaagt gtgtgttttt ttaatcttgg gcaatatttt tttaattcca
    29341 atttttctgt agtatttttg ccatttttat aggtgctata attaatatca ccacattctt
    29401 cacattttaa accaacttta attctcattt atattttcct taaaaaattt aaagccaagt
    29461 attaaacttg gcttttaaaa ttacttaata attttagaaa caacacctga accaacagtt
    29521 ttaccacctt cacggatagc aaaacgagta ccttcttcaa gcgctactgg tgcaatcaag
    29581 cttacagtaa ttcttacatt ttcaccaggc ataaccattt caacgccatc agctaattta
    29641 atagaacctg ttacatctgt tgttcttaca tagaattgcg gtctatagtt attaaagaat
    29701 ggagtatgtc taccaccctc atctttattt aggatataaa cttcagcttc gaaatcagta
    29761 tgtggagtaa ttgattttgg tttagcaaga accataccgc ggataacttc ttcttttttt
    29821 gtaccacgaa gaagaacacc aacattatcc cctgcttcac cttgatccat ttcttttcta
    29881 aacatttcaa cgccagttac agttgttgtt tgagtatctt taataccaac gatttctata
    29941 gtatcaccaa cttttacaat acctttttca attctacctg taacaacagt accacgacct
    30001 gaaattgaga aaacatcttc aattggcatt aagaaatctt tttcagtgtc acgagttgga
    30061 gttggaatat agctatcaac agcagccata agatccataa ttttcgctga ccattcgcca
    30121 tcttgtccag cttttgcttc ttcaagagct tttaaagcag aacctgaaat aataggtgtg
    30181 tcatcacctg ggaaatcata agagcttaat aattctctaa tttccatttc aaccaattct
    30241 aaaagttcag catcatcaac catatctgct ttattcataa atacaacgat atatggaaca
    30301 cctacttggc gcgatagaag gatgtgctct ctagtttgtg gcataggacc atcagctgca
    30361 gaaacaacaa ggatagcacc gtccatttga gcagcaccag tgatcatgtt tttaacatag
    30421 tcagcgtgac ctggacaatc aacgtgtgca tagtggcgat tatctgtttc atattcaata
    30481 tgagaagttg caatagtgat acctctttct ttttcttcag gagcgttatc aatattatca
    30541 taatctttaa gttctgccaa acctcttctt gaaagaacag cagaaatagc agctgtcaaa
    30601 gtagttttac cgtggtcaac gtgaccaata gtaccaatgt ttacatgtgg cttattacgt
    30661 gaaaattttt ctttagccat tttttcctcc atataaaaat ttaacaaggc aagtctatat
    30721 ttataatttt ttcaatttta tggagctcat agcgggaatt gaacccgcga cctctccctt
    30781 accaagggag tgctctacct ctgagccata cgagcgctca gaaaaattat ataaaaacat
    30841 agacaactaa aaaacaattt taggggattt actgtaagtt agaaaaaaaa tacagctccc
    30901 agtcaaactt tggagcggga aacgggactc gaacccgcga ccctcagctt ggaaggctga
    30961 tgctctagcc aactgagcta ctcccgcaaa gcatggtggt gagtcgtgga ttcgaaccac
    31021 ggaaggcgaa agccagcaga tttacagtct gccctcgttg gccacttgag taactcacca
    31081 taaatgaaat attacatcta agcttattgt aatattctgg tcaaacactg ctaaaataat
    31141 ggagctggtt aagggacttg aacccccgac ctgctgctta caaggcagct gctctaccaa
    31201 ctgagctaaa ccagcaaata atttaaagat gttattatat ctgaaaaaaa atagtttgtc
    31261 aagattatgc gctataaatt atttaaaaaa caatttcata attaaaaatt tcccattaaa
    31321 aatacaaaaa ctaagatttt ttattgaaat catttatgat agtcaaataa attaaggaat
    31381 ttcttagctc tttcgctttt aggattttca aaaaaaccat caggagtatt ttcttcgata
    31441 atttctccat tatccataaa aattattcta tcggctaccg ctcttgcaaa tcccatctcg
    31501 tgagtgacta taagcatagt cattccatct tttgccaaat ttaaaattac ctctaaaact
    31561 tcacgaacga tttcaggatc aagtgctgct gtaacctcat caaaaagcat aagctctgga
    31621 ttcatgcaaa gactgcgcac tatagctatt ctttgttttt gccctccgct taactctttt
    31681 ggataagcat cgattttatg tgctaaacct actttttcaa gccaaatttt agcttcttgc
    31741 aaaacttctt ctttagctct tttttgtact tttaaaggac ctaaaagtat gttatctttc
    31801 acgcttaaat gttcaaatag ctcgtatgat tgaaatacca tacccacttt ttgacgcact
    31861 cttgtccaat ctttaaaatt tttatcgatc ttatcttgtc ctatttctat aaccccatct
    31921 gcaatttcct caagcccatt aatacaacgc aaaagagtag attttccgca accacttgga
    31981 cctaaaatca ccaccacttc tttttgtttt acttctaagt tgatattctt taaagcatga
    32041 tgaaagccat aatatttttg caaatttttt atctttaaaa tactcatttt aactccattt
    32101 tttttctaat tttttagaat ataaagtaac aggatagcaa attaaaaaaa agataaaaaa
    32161 gattagacca taaataataa atggtgctaa atcattttta ttgttaaatt cgatgatttg
    32221 ctgccccact tttacaagct ctaccgcacc gattaaataa gcaaaagttg tacttttaat
    32281 catgcgtgtt aataaattca tactcatagg tgttaaacga cgcatagctt gaggaatgat
    32341 aatataaaaa taactttgag ctttatttaa accaagactt gctgcacttt cgtattggtg
    32401 tttaggaatg ctttttaaag aagttcttac caaatccatc atttcaaaac ttccccaaat
    32461 actaaaaaca ataatagccg aacttacact gcttaaattt atacccaacc atctagaaag
    32521 tccaaaatat accataaaaa gccatactag tagcggcata acacgaacaa attctaaagc
    32581 aaaacgacat aaaatataaa tataacgatt tttcagactc atcaaaatac ctaaaaaaag
    32641 cccgccaaaa gaagttataa taatacttac aatagaaatt tcaagtgtga tatacaagcc
    32701 tttccaaagt cgacttaaag tatctggatt taatagatca aacatttgaa aacctttttt
    32761 ccaaaaagaa caaaaacaaa gaaataggca gtatgataca taaatatccc aaaaacaaaa
    32821 gcaataaaag ctcatccgtt ttataagtaa gtgaatttaa acccttcata actgtgacta
    32881 aatccggcaa agctataatg ctcacaacag aggtttcttt aataagaaaa acaatatttg
    32941 cgcttattcc tggtaagcaa acccctaaag cttgaggcat tataacataa cgcaaattat
    33001 tcaatttagt aaaacccaaa gaaagacctg cttcaaattg ctgcttttta atggcttcaa
    33061 aaccagctct aaaactctct gccatataag aaccgcccaa aaaactaagc cccacaatag
    33121 cacaagcaaa cgctggacgc aaagcctcat ctacacttaa acaaatcaaa ttcaaaggcg
    33181 gaatttgttc taaatgaata tcaaatttag gcaaagcata atacaagaaa aaaagctgta
    33241 tcaataaagg agtattgcga gaaaattcta tataaacttt acaaaaagct tccataatcg
    33301 ttattttaaa ataactcatt aaaatacaaa aaaagcctat aattatagaa aaaataatac
    33361 caaaaaaact aagttttaaa gtaagccaag cagctgcaat aaaagcattt gaattagcta
    33421 gtataaaatc aaaatccatt ttattcctat taccaaagtc ctttttttaa accctcttta
    33481 tctaggatct caattttacc cttttttgtc tcaattagct ctgaattttt aaattctttt
    33541 agaattcttg acaaagattc agcacgaaca cttaaatcca ctgcaatttg tctttgcgaa
    33601 atttgagcca aattcttttc attttccaaa agatatcttg caagtttact ttttaaatcc
    33661 aaagaatttt ctaataattt tttttctaaa attttaattt tttcaaaaag agatgaaata
    33721 agcaagaaat taaattcttt attttggctg cacagggttt caaaatcttc aaaatcaatt
    33781 tctaaaattt cacaatattc ttcacaaata gcatttgctg gatatctcaa acgcttaaat
    33841 gtaggcattt cggctataaa attaggcggg gtaaaataat gcaaagtaat ctctttttcg
    33901 cctgctgtgc ttttgtatac acgcactcta ccttttaaaa gaataaaaaa ttttaatgcc
    33961 ttttcgcctt caaaaaataa aatattattt ttttcaaatt ttcttatttt acctataccc
    34021 tttaaaaaat ctaaatactc ttgcattata atatttaacc tatgttaatt ttatctcatt
    34081 ttgtttgtgc tatattaacg ataaattttt atccaaaggc aaacacaatg aaatatgaaa
    34141 ctataaatca agaaagtata gctaaactta tggaactttt ttatgacaaa ataagaaaag
    34201 ataaggattt agggcctatt tttaacaatg ccataggaac tagcgatgaa gcttggaaag
    34261 agcacaaagc aaaaataggg aatttttggg caggaatgtt gctaggggaa ggtgattata
    34321 tcggacaacc tctaaaaaaa catcttgatt tgcctccttt tccgcaagaa ttttttggaa
    34381 tttggttagg actttttgaa gaaagtttag ataaaattta caataatgaa gaaatgaaaa
    34441 atgttatttt acagcgcgca caaatgatag cctcgcattt tcaaaatatg ctttatcgtt
    34501 ttggtggaca ttaagattat atttccatca aatctttttt tgctttttcc aaaatgtatt
    34561 catctttgga aaaatcaaaa tatttaaatt catttccatg ctggataaat ccatcgagca
    34621 aatctccact caaacgattt ttaagatcaa gttctgcgat tttaaaacca tctaaagtac
    34681 tagcaaattc ttttaaacga cttggaattt ctttgagttt tgtataaaga taacaagtgc
    34741 ttttaagtcc gacacggccc acgcgtccgc gaagttgatg caaggtagca aggcctaagc
    34801 gctccgctcc tacaataaca atagtactaa gccttggcaa tgaaattcct acttctacga
    34861 ctgtggtgct taataaaata tttccctcat cacgaaaccg ctccaaaatt tcatcctttt
    34921 gcttgtcttt tccatgcgta acaaaaactt tttcataatt atcctcccaa tacctccttg
    34981 cttgttctaa agaaagataa ggaattttat cgcttggatt gactaaggga tagatgatga
    35041 tgatttgatg attttgtgcg atttcttctt tgattttttc actaagcttt gcaaaacctt
    35101 cattttgtat acaaagagtg gtgatatcct ttttaaaagg catttccttg ataaaactaa
    35161 aatttaaaag ttctgattgt atcatgctta aagttcttgg aatgggagtt gcagaaaatt
    35221 gtataaaatg tggggctaat tcattttcat ttaaagaata aatttgctga cgctgtgcag
    35281 agccaaagcg atgctgctca tctatcatta caagcacagc attatgactt tgaaggtgaa
    35341 tgagcgcatg ggttcctata atcaaattgg cttttttaat tttttcttcc aaatcttttt
    35401 cttttttacc ccctttaata aataaaatat ccacaaattc aggcaaaagc ttttttgcct
    35461 cttcatagag ttgattggca agtatgctag taggagccat taagatagct tgttttggat
    35521 acaccatcaa agcagcgccc aacaaaacca aagtcttgcc acagcctaca tcccccataa
    35581 tcacccgtct tttagcttct ttagagccca aatcttgctc tatatccttt aaagcattta
    35641 attgatcacg agtgggtgaa aagggtaaat tttttagcca attggctata ttgaaaattt
    35701 caatttcata agctttaaag tgactttttt tagccttcaa gcgttttaaa aaattgtaaa
    35761 tttcaatata ttttaaatct ttctcaaagc gctccaaatt ctcaaacatc aaaaaacttt
    35821 tttcatcata agtgtgtaaa tttaaaagaa aatggatata tttatcctca atcccacttt
    35881 cttttaaatt ttcataatta agatatttgt gtataaattc agaaattttt ttatcttgta
    35941 aaccttgaat ttgatatttt ggagcaaaac ctgcaaaaga agttaaaatt ttaggattgt
    36001 taaattgcca aacatggcca aaacgcgtaa gtttcccatt taaaataagt tctttgccta
    36061 ttttgcaaat tccaaagtgc caagccctag gatgaaaaaa cacaaaggaa atgtcttgac
    36121 tccactcttt acaaaatccc aaaccaaaga gctgaccttt ttttgaatga atgcttttaa
    36181 tgattatttt ttgagtgcat agctcatttt ctttaggtgt tttgcttgga cttaaatttt
    36241 cgattttttt aggtaagata agcgctaaat caatcgcgct tttaattttt aattttttaa
    36301 aaaaatcaaa atcattttct ttaattttca tttgcaatac ttgcaaaatt taaatctaaa
    36361 atttcattat gtttttgaat ataagcattt agctcttgaa gctctacttt ttctataagc
    36421 tttaattctt ctttataata tccttttggc aatccctgat agtactcatt aaaacttatc
    36481 gacaaacgcc tactaagact ttcataacgc aaaggagttg aacctatgag aaaattttta
    36541 gcctgcacaa gctcattttg actcactcct tcttttacaa aatctctaaa tacttcttta
    36601 actatctttt tagcttcttt agcactttca tttttagttt gcaaataacc aaaaactcta
    36661 gtaaaagatg cattcatatc aagcatagca taagcagaat acgcaagccc tcttttaaca
    36721 cgaatttctt ccattatcct tgatccaaaa ccgccttgac ctaaaataaa tagtgcgatt
    36781 tttgcaagat aaaaatcctt atcattaaat tttgtaaaaa agggtgcagc aaagtaaata
    36841 taggcttgtt cgctttcttt tctgatttgg attatgtctt tattttttga gttaatttca
    36901 taagtttttt gtgaattttg actgcctttt tgaagttttg ctaataattt atttaataag
    36961 cctttagcct tttcttgggc taaattcccg cctaaaatca ctacaagatt acttaaatta
    37021 atatttttct tataaaaact ctccaagtcg cttaaagaaa tttgcttgat acttttttca
    37081 tcgccatcat ttggactttg aaattcttta cattcaaaaa tttcgctatt aagcaaattt
    37141 tttgctaaat aatcaaaatc actattttta ctagcaagct cacctagggc attgattttt
    37201 aatttttcta aaattttttc ttcaaatcta ggatttaaga gtaagttttc taagtgtttt
    37261 aaagcaaatt caaaattttc tttcaagcaa gaaagattga tttctaaact ttcaaaacca
    37321 ctacttgctt ccaaatttac agctttaaat tccaattctt taaaaaagct atcatctaca
    37381 ccctcattta aaattcttgc aaacatcttt gcaagtcctg ctatttcatc ataacttctt
    37441 ccacaatttc taaaaacaag ctttaagata acaataggaa aatcgttatt ttcttcaaaa
    37501 ataaaaggaa tttttactct actaacttct aaattctgca ttaaaacctt tctaaaattt
    37561 cataagctgt attacgctta gcgggatttt cacctaagct tttaatcagt cttatcatct
    37621 catcttgatt cattctataa ctcgcacctg cagcgcttac aacattttct tccatcatgg
    37681 ttgagcctaa atcattggcc ccaaatttta aagcaagttg cccaatcaat gaaccttgtg
    37741 ttacccaaga actttgtaaa tttttaaaat tatccaaata aagtctagcc aaagctaaaa
    37801 gtcttaaata tttgtttgaa ctttgcttca tgatttcagg atgtttttgg attaatgctg
    37861 tattttcact ttgaaaactc cataaaataa aagctctaaa tcctcctgtt tcatcttgta
    37921 attttcttaa atgctcgaag tgatctataa tctcctcatc actttcaacc gttccaaaca
    37981 tcatagtagc agtgcttttc ataccgattt catgcgctct tctatgtact tctagccaag
    38041 tagcagtatc gcatttatta ggcgcgataa tatctcgcac tctatcgctt aatacctcag
    38101 cacccgctcc aggtattgaa aacaaacctt tagcttgaag tctttgtaaa acttcagaaa
    38161 ttgaaatttt agaagccttg gcaatataag caatttcaac tgcagaaaaa ccatgcacgg
    38221 taatatttgg ataatgctcc ttaatccacg aaacaagctc ttcataccat tctattttta
    38281 atttaggatg caccccgcct tgaaaaagaa tttgcgtccc tccaatagct tcaagctctt
    38341 cgattttttt accaatttct tcaaaactca aaatataagc gtcatcttct ttatgatggc
    38401 gataaaaagc acaaaaagaa caatctatgc aacaaacatt ggtgtagttt atatttctat
    38461 ctacaacaaa ggtggtgatt ttttcgggat gaagttctaa ttttctttga taagctattt
    38521 ctccaagttc tgctaaattt gcattcctta acaaataaag agcttcttct ttatctaatc
    38581 ttttcaagtt atttccttaa atccattttt agctttatta tagcatttaa aaacataaat
    38641 tatgctatag tttcgcttat gaattatatt gacttattga aaaataataa aaatattaga
    38701 atactaacct tagtacaatt tatcgtgtat tttggcgctt ggttttccca aacaggtgtt
    38761 tttactcttt tagtaagcct taacgctcct acttgggcaa cggctacaag cgctatgctt
    38821 gcttttttac caggagtttt gcttgctcct attaatggag ttatagtaga aaaaaacaaa
    38881 cccaaaaagc ttttgttaag tatgattagc atagaacttg tttctatttt ctgccttatc
    38941 tttgtaacca gtcttagcat gctttggctt ttatttattt taatttttat tagactttgc
    39001 gtggcttcga tttattttca agctgaaatg agcttgctag ctaaaatttt aaatccaaaa
    39061 gaactcaagc ttgctaatga gatgcatagt gtaatttggg cggtttctta tacagcaagt
    39121 atggcaagtg cgggaatttt tatcaatttc tttggcatta aagcggcctt tttgtttgat
    39181 tgttgtctga taattattgg aattttattt ttaaccaaac ttcatattcc tcattttaaa
    39241 caaaaaattc aaaataaatt ttttattctg attaaagaag gttttttata tgttttacaa
    39301 aataaaatta tccttcatct tattatattg cacgctttta taggacttac cgcttatgaa
    39361 acactcgtaa ctttattagc ccaacacgaa tacaaagaag ttttatccgc tgctttggtt
    39421 atagggtttt taaatgcaat aagggcttta gctttagctt ttggtcctat ttttctaagt
    39481 aaaatcacaa acaataaaaa tgtatttttt ctatacttag gtcaaggttt aggaattata
    39541 ctttgggctt taacccagtt taatttttat atttcattta taggccttat tgctgcggga
    39601 ttttgtacct catccctttg ggcttatact tatactatga ttcagaaaaa ttgtgataaa
    39661 acttactatg gcagagtgat tgcttataca gatatggttt atcttagctt tagcgctctt
    39721 atttctcaac tcatgggctt attgtttgaa caaggtttta agcttgctat aatcacggct
    39781 ttacttggaa tggtatttat atttgcggct ttttattgga gatggtttaa taagaaatat
    39841 ttgtgaattt tacaaattca caaattaaaa gattaaattt taaataaatc ttgcaagttt
    39901 ttcaaggctt cttcattact taaagtattg cttgtggtgc gagcattcac ttcattaagt
    39961 tcgatttcat atccactaag catacccgca agacgaatat taataccgct ttttccaatg
    40021 gccttactct tttgctcgct gtttaaagtt acaattgctt tttcattttc aatttttaca
    40081 gaactcacta tagcaggtgc taaagctctt gcgattaaaa tttcaggttc attgctaaat
    40141 tcaatacaat ctatattttc attatgtaat tctttactca cagcgttgat tctaacccct
    40201 tttacaccta cagtagctcc cacaggatca atatttgccc catttgcttg aagtataatt
    40261 ttcgctcttt ctccaggaat tctagcgcat ttaactacgc ttacatatcc atctttaatt
    40321 tcaggcacct ctgcttcaag taaacattct aaaaatttag ggcttgtgcg acttagctcc
    40381 attttaatac ccttatccgt ataaacacgg cgtatcacag ctttaacaac atcgcccact
    40441 ttaaattttt cacccttgat gcgatttttt ctaggtaaaa aagctcttag ctcatcgatt
    40501 tctatatagg tattttcctc attatcaatt cgcacaacat ttccaaaaac catttgaccg
    40561 actttatttt tatatttttc aaaaatggtt tgctcaagta gtttttgtat atggtattct
    40621 aattctttat gtaaaatatt tacagctgtt cttcctaaat tttctaaaga acattcatag
    40681 gtaagctcat caccaatttc aacatcaggt gcttcttttt tagccttgct aaattcaata
    40741 taactttctt tattttcatt caatctttcg tcattatcag ccacaactgt aattttttga
    40801 taaagattta aattttttct atctacaaaa aagtcatatt cttgcccata aattcttttt
    40861 gctgtattta tcaaagctat aataactttt tctttcacgc tttctatatc taaatttttc
    40921 tcattcgcaa tgctttctat aatgtctgcg attctttcca taattatcga taccttttct
    40981 tttgggattt ttttaagaaa gtagattaaa agtatatctt taataagttt aattaaaagt
    41041 aaaatttgat aaaattatag atttaaaaga cgctaaggat ataatatgga tttaaaattg
    41101 gcaagaaatt taatcaatga agagcctaaa aatattagtc tagctaaaat tgaagaggct
    41161 gtaaatcaag aaggacaaaa gtttttttat tttgataaag aaaattcaca caaagatctt
    41221 attgccttgg ttgaacactt tgaaaaaaaa ggcttaagtg tttatcatag aactatcaga
    41281 tatggtttag atagtaatga ttttatgtat gaggttcata ttctttgagc tcgaaaaaac
    41341 tttttattca aaccttaggc tgtgcaatga atgtcagaga ttctgaacat atgatagcag
    41401 aactgacgca aaaagataat tatactttaa cagaagatat taaagaagca gatttgatac
    41461 ttatcaatac ctgctctgtg cgtgaaaagc ctgtgcataa gcttttttca gaagtgggtg
    41521 gctttgaaaa ggttaaaaaa tcaggcgcaa aaataggagt ttgtggatgt acagcttctc
    41581 atttagggag tgaaatcttt cgtcgtgctc cttatgtgga ttttgtacta ggagctagga
    41641 atatttctaa aattacccaa gctgttaaca ctcctaaatt tatgagcgtt gatatagatt
    41701 atgatgagag tgaattcgct tttggggatt ttagaaatag catttataaa tcatatatta
    41761 atatctctat aggttgtgat aagcattgta cttattgtat agttccccat acaaggggag
    41821 atgaaatttc cattccttta aatatcatct ataaagaagc acaaaaagca gtagataaag
    41881 gagctaagga aattttccta ttaggacaaa atgtcaataa ttatggtaaa agatttagaa
    41941 atgaacacaa aaaaatggat ttttcagatc ttttagaaga acttagcacc atagaaggat
    42001 tagagcgcat ccgttttaca agtcctcatc ctctacatat ggacgataaa tttttagaag
    42061 tatttgccaa aaatccaaaa gtttgtaaat caatgcatat gcctttgcaa agtggctcaa
    42121 gtcaaatttt aaaagctatg aagcgtggtt acaccaaaga atggtatcta gatagggcat
    42181 taaaattaag agaactttgc ccaaatgtta gcatatccac agatattatt gttgcatttc
    42241 caggagaaag cgataaagac tttgaagaaa ccatggaagt tttagaaaaa gtacgctttg
    42301 aacaaatgtt ttcttttaaa tactctaaac gccctttaac caaagctgct accatgccaa
    42361 atcaaatcga tgaagagata gcctcaaatc gacttagtac tctacaggct cgtcataatg
    42421 aaattttaga cgatattgtt aaaaaacaag aaaataaaac ttttaaagtt ctttttgaag
    42481 aattaagagc aggcaatgct atcgtgggta gaacagataa taattttcta gtgcaagttg
    42541 aaggcagcga agagctctta ggaactttta aagaagtaaa aattactaat gcaaagcgta
    42601 tggttttata tggggaaatc atttaaaata gcttttatag cacgcttagt tttcattcta
    42661 caatggttga tttttcttac ttgtaaaaaa acctacaaag gtgataaagt tgatcaaatt
    42721 tctaatgtga tacttttttg gcatgggcgt cttgccctta tgcctttcgc atttaggcat
    42781 tttggcaaaa aaggaaaaaa agcttatgtt atgatctctc atcatagaga tggggagcaa
    42841 attgctagaa ttatcaaatt gtttggatta gataccgtgc gtggaagcac ttcaaaagga
    42901 gctagtacag ctcttcgaag tgcttttaaa attttagatg aaaatcatga tgtagtcatt
    42961 actcctgatg ggccacgcgg accttatcgt agcatttcag atggagcggt attgcttgca
    43021 cagaaaaaaa atgttaaaat aagaatttta aactatgagg caagaaattt ttgggaattt
    43081 aaaagttggg ataaaatgat tttacctaag ccttttactc atttagtcta taggcttagc
    43141 gaacccttgg atatttcaag tttagataaa gatcaagcta aatttttttt acttgaacat
    43201 tttaaaaaaa ttgaacaaat ggataaattt taaggaataa aatgttattt ttacttaaaa
    43261 aaatattacc acaacttttc acaagtatta ttttagaaga taaaaaaaac atccttaaaa
    43321 cttctatata taaaaatcac aaacttataa gtagtaatga aaaaaccttt gataagagtg
    43381 aaaaattatt agaatatgta aaagcactca atagcaaatt tttattttat cacacagcat
    43441 tatttttaaa tgtcaaagag caaggtttga ttcctagtaa aaacgacaag gattttgagc
    43501 gttttaatgt aggtaaaatg agcttaaaat ccatcgcttt aaataatgct ttgatataca
    43561 cagcaacaga acacatagaa tactttaatg aattgtttga agattatggt ggtttagatt
    43621 ttttatactc tccttttgct atactttatc ataatatttt aaaagaaaaa ccaaacagcg
    43681 ataaaataac tctttacgcc tataagcatg agcatattct aactcttata atttgccgag
    43741 gtattgaaat tttatatgga gatatcattt tctttgaaga agaattggat ctagaatttg
    43801 gacatcaaga agagaattta gacaacttag gcgaagatac attaaatgat actgaagtaa
    43861 cgcttgataa ttttaatgaa accctagaag ataagcttaa cgctcttgat caatttgata
    43921 atattttagg aaataatgag aatgattcag agtttttgga tggcaaagat aaatttgatc
    43981 ttgaagaaat ggatcaattt ggaaacgaca tagaactttg tcgtcatatt gttacaagta
    44041 ttgaaaaatt ttataaagat gacaaatatc caagtgcgtt tatcgataag gctttaatcc
    44101 ttagcgccaa agagcttgat caaagtgcta ttgaattttt agaagaagaa actttactgg
    44161 aaattgaatc taagccaatc aataccttag attcaatcat agaacttatg caaaaggagc
    44221 ttcagtgaaa agctatagct tcatacaacc tagaaaaaaa cctatcttta cactctttga
    44281 caaaatatgg tttgggcttt ttagttttgg tatagttttt atttttgcgg tatattttct
    44341 atatcttact caaatcgcat taacgcataa ttttatagaa gagcaaaaag aacaagtttt
    44401 gcaatttcaa aataaaacac aagaaaacgg aaaattatat gatattcttc tagaacaaag
    44461 taaaattgca aatacctttc acactcaaaa tcaagctttc aaaaatagct taaaaaatct
    44521 ttttgatata atagttaaaa ccgatggaat cactcttgaa agtatagaac aagaagaaaa
    44581 ttctctaaaa cttataggag ttacgccaac aaaagaaatg tttgccctac ttttagaaac
    44641 accgctaaaa agtatttttg atcaaagttt tacaacttat tatcgtttaa acaatggctg
    44701 gtatcgcttt attagcataa gtaaacaaaa ttcaggagtt ttacaatgaa agataaaagt
    44761 cttgaagaat taaatatttt aaagattgtt atttatgttt taagctttat tactgtatgt
    44821 actgctttga ttttattttt attattgcct gtgctgaaag attacaaaca aacccattta
    44881 agaaaaaatt cgcaagcagc tatatttaat gcagcaaaag ctaagctaga tactagtgaa
    44941 aataaaataa gcgccttaag aacagaaaat aataaaagtc tagagcaatt tgaacaacaa
    45001 ttcaatctca cgcactttca aaatttttta gaaaaatact ttgaaaatat ccaaataaca
    45061 gaacttaaac tagataaaaa agaaaaatat cttacccata gaatcaacat ccgagcatcg
    45121 ataaataatc ctagacgctt atatgacttc atagatgcct tagctcaata taacaatctt
    45181 gtaaagattg attatcccat gaccttaaag gctagtgatc atgggataat gataaatctt
    45241 aatgtgcaaa tttactcaaa ctagacttac attctcgcct tttaagacct gattcattgt
    45301 attcatagca cacatttttc cacacataga gcaggaattt agatcatcgg ggcgtctttc
    45361 gttaaacatt tttttagctt tttcgccatc aatggcaagt ttaaacattt tctcccagtc
    45421 gatatcctgt ctcgccttac tcatctcatc atctcttttt ctttcttttg gaagcttagc
    45481 taaatcccct gcatgagctg caatcttagt agctactata ccatctctaa catcatttaa
    45541 attaggcaat cttaaatgtt cagcaggagt tacataacaa agtatatcag cacccgcagc
    45601 agcagccaca gcaccaccga tagctccact tatatgatca tatccagcac caatatccgt
    45661 aactaaaggc cctagaacat aaaaaggagc gcctttgcaa atgcgttttt caatttgcat
    45721 attagcttca atctcattaa ttgccatatg tccaggtcct tctatcatta cttgaacacc
    45781 tgcttcccac gctctttgag tgagtaaaga taattcgata agttcagaaa tttgcgctgc
    45841 atcacttgca tcatgtgtag atcctggacg caaagcatca cctaaagata gtgtcacatc
    45901 gtattttaaa caaatttcaa gcaaatcatc atagtattca aaaaaaggat tttcagcttc
    45961 tttcatagcc atccacgcat aaagtactga tcctcctcta gaaactatat tagtaagtct
    46021 tttgctttct ttaaaaactc tagccgcgcg cgaatttata cccgcatgta tagtcataaa
    46081 atcaaccccg ctttttgcat gatgataaac cacatctaaa aaatccctag cgctgatttg
    46141 ttttagatct ttttctaaaa atcctaccgc atcataaact ggaactgttc ctatcatagc
    46201 ttttgaaact gcgataagct catctctaaa acgacttgtt ttgccataat tgcttaaatc
    46261 cataatagct tcgattccaa atttgtgagc aagctctact tttttcatct cctcactata
    46321 atcaacacaa tcatttgaaa cacctaaatt tacatttacc ttagtgcgaa gtccaagtcc
    46381 tataccattt ggatcaagac ttttatgatt gatattagca gggatgataa tcttaccaca
    46441 agctatattt tcaagcaaaa aatctttgct tacttcttct ttttgagcaa caatctccat
    46501 ttctttggta aaaatacctt ctttggcata aagcatttga gttttcatat ttatcctttg
    46561 aaaaatttgg ataaatgagg gtgcaagtaa attgtagaaa gtataaatct tcccgacgct
    46621 agcattatct agttccggtt cggtctaagc ttttagctta ctctcagcct gtatcacaag
    46681 ctcccgtcat ttatgtttta attatactct ttaaatattt tatttttgct ttatgcgaga
    46741 agtcttggta aaatttataa gttcttcagt ggttttgata tgataaggga gtttgccaag
    46801 acaatgttta aaaatttcag ccgcagccaa agcgtcgttt aaagctctat ggtgggcatt
    46861 ttttatccct aaaagctctt ttaaaacatc taatttatat cttggacttt ctatacagca
    46921 ttgcgcaaat tctatggtgc aaatacgacg attaagcaaa attccaaaac cacactcatt
    46981 taaagccttg gaaataaaac cataatcaaa acgcacatta tgtgcgacaa aaatactgtc
    47041 ttttaaaaaa agtctaaaat catttaaaac cttagtcaaa ctcggtgcat cttttaccat
    47101 gtctaaatta attcctgtaa gttctgtaat attttcagga atttctttta cctgtaccaa
    47161 agagctaaaa cgatcgattt cttgcaaatt ttttatctta actgcaccta tttctaaaat
    47221 ttgtccgttt ttaatcccgc ctgtactttc tatatctaca atgcaaaaaa tttcttcttt
    47281 gatctttttt gtacgcgttt gcaaggtaaa aatattattt ttatctagag ttaaacccaa
    47341 acccaaaagc tcgaaagttt ctaaatcaag ttcataatct tttaattctt caatcttttt
    47401 aaattcttta attacccact catagggctt actttgctta cttaagatag aaataatctg
    47461 atcaacttgc tgcaaactca aaattcaagc tttaaagatg aaattgaagt tttataatca
    47521 tttgaagaaa aaatataact tccagcgact aaaatatctg ctcccgcagc ttctaaatcg
    47581 cttgcattta agccattaac cccgccatca acctctataa aaaccttagc atttttttca
    47641 tcgatcagtc ttcttaattc tttgatttta tcatatacta aaggtaaaaa tttttgtccg
    47701 ccaaagccag gattaacact cattaaaagc accatatcta caaagtctat catatgtttt
    47761 atggaattta taggagtatg tggatttaaa acaatagcag gatggattcc ttgacttctt
    47821 atatactcgc aaagtcgtat agggtgggct tcactttcta tatgaaaaga aataaattta
    47881 ggcttgatag ggataaaaag atctacaaat ttacccacat cttttaccat taaatggaca
    47941 tctaaaggta tttcggtaat ggttgaaatt ttttctatta cacagggtcc aaaggttaaa
    48001 tttggaacaa aatgcccgtc cataacatca atgtgcaaaa gatcggctcc tgcttcatca
    48061 attgctttaa tctcttcttc tagttttaaa aaattggccg ataataaact cggagctaca
    48121 tacataagct tagcctcgta aagtaaaaaa tttt
//
LOCUS       DBBXOW010000005        41651 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.005, whole genome shotgun sequence.
ACCESSION   DBBXOW010000005 DBBXOW010000000
VERSION     DBBXOW010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 41651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41651
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.005"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(234..308)
                     /locus_tag="ACJE1S_000281"
     tRNA            complement(234..308)
                     /locus_tag="ACJE1S_000281"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(274..276),aa:Asn,seq:gtt)
     gene            complement(390..1640)
                     /locus_tag="ACJE1S_000282"
     CDS             complement(390..1640)
                     /locus_tag="ACJE1S_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsS family sensor histidine kinase"
                     /protein_id="HGG0805855.1"
                     /translation="MNRSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGIISEREFEEQTKNYNKMEPILEVRQIRRILFGGEVLARVEVNNGL
                     IEIISYDRQVYLNIIFDGKVNLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKALKKQIDKFAQGKLNDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     MMHELKTPITKGLITLEMLEDNKYKERLESIFNRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDNNIRIFMDESFFVNVDFKLFTTAIKNMIDNGIKHSENGF
                     IQIDIMDDYICFKNRGPELNNTLEYYTQAFTQGGSKQKSSFGLGLYIVNTILESHGMK
                     LDYDYEEGVNLFYFRNLKSIIVKE"
     gene            complement(1637..2311)
                     /locus_tag="ACJE1S_000283"
     CDS             complement(1637..2311)
                     /locus_tag="ACJE1S_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HGG0805856.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(2394..3812)
                     /locus_tag="ACJE1S_000284"
     CDS             complement(2394..3812)
                     /locus_tag="ACJE1S_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HGG0805857.1"
                     /translation="MKKLILSLSLASALFAANINFNETSITSNRVNPAAGDVVLSYHN
                     SIRDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRRGGNDKEVVSS
                     LGSGVIISQDGYIVTNNHVVDDADTISVSLPGSDTEYKAKLIGKDPKTDLAVIKIEAN
                     NLWAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGFLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGRID
                     RGFLGVTISALQGDTKKAYKNQDGALITDIQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     SDLKNYIGTLEIGQKISLDFERDGENKRVDFILKGEKENPKAVQNDLIEGMTLRNLDP
                     RFKERLQIPKDVNGVFVESVKDKSRAKDSGFKEGDIIIGVGQSEIKNLKDLEQALRQV
                     KKKEFTKIWVYRNGFATLLILK"
     gene            4018..4917
                     /locus_tag="ACJE1S_000285"
     CDS             4018..4917
                     /locus_tag="ACJE1S_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HGG0805858.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARQYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSKNTGGVNLDDILKDLFGGGFGG
                     GSSRGSRFNGFSSKGFNTGFGGFGGFEEEDLDSTIELSIPFEKAVVGGEYSFNLQGET
                     IKFKIPHGIKQGEKLRIRNKGKNGRNGTRGDLIVKVKLGESEIYQREDDDLYQKVDIS
                     LKTALFGGKVTVNTLKENKKEATITIPANSKNGQKIRLKGYGVQNRKSDIYGDMYLVL
                     NVVLPNTETLDEKLIEMLKEKLS"
     gene            4934..5308
                     /gene="hspR"
                     /locus_tag="ACJE1S_000286"
     CDS             4934..5308
                     /gene="hspR"
                     /locus_tag="ACJE1S_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HGG0805859.1"
                     /translation="MEHHYNEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGVNLAGVDVILKLKNQLHEFENLIDELRLELSKQQNP
                     NASSKAVVKHKNSFDLIFYEKK"
     gene            5309..6931
                     /locus_tag="ACJE1S_000287"
     CDS             5309..6931
                     /locus_tag="ACJE1S_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HGG0805860.1"
                     /translation="MDNFLEIFLITAALAIVLNVIFKKFEIPTIIGYIAAGEIISKIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLIAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIGQLLLTTLLSAVILIALLFFIGKYLVDRIFRLIIRASSQEIFIS
                     TILFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLHIVAQNWFIICVLTLLIMGLKFGIVCGFLFLYTKKRVALKTAFSIAQVGEF
                     ALAIFSLLQAKSMLDVETAQILIVVSIVTMIITPFVLNNIRKIANVVEDMTLNTNVVQ
                     QSTHSTLKNHLVIFGYGRLGQEIVQKIKNTGVPYLVLESDLNLVELGISRGENVVFAN
                     AAQEETLKIANITECAVAIVTITNEAKLEMICQVLASYPKPIDTIIHVNGSLEKILFS
                     SIDENIRIVRSEKVIARNLVQEALECRIHKNT"
     gene            6941..7273
                     /locus_tag="ACJE1S_000288"
     CDS             6941..7273
                     /locus_tag="ACJE1S_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805861.1"
                     /translation="MAKIDEKTLRVKYLRALEKFANAAISALKKENFDKEKFQERMEK
                     NKKIVEKCEAVNLNSSYNKSLENFVNHCLDFSKQKEELLSLANALDKLKKGEKKEKHK
                     TYLKDYYD"
     gene            7266..7886
                     /locus_tag="ACJE1S_000289"
     CDS             7266..7886
                     /locus_tag="ACJE1S_000289"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG0805862.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRNELNLSPLSREKIMQTI
                     NTPNVDWAKELYSIDNFHHSSFKDGFEKYFIKHYEQSVVLFEGVKEILEFLKEQNCFL
                     AIATNAPQSSLSSILKKHEIIPYFDKILGVSLGIEPKPHPMMLDLLKSEAPHKISVFI
                     GDSQKDRECAKNANVPYFHAKWYQKDLQENEFSNANELKNFLEKYL"
     gene            7939..9933
                     /gene="glyS"
                     /locus_tag="ACJE1S_000290"
     CDS             7939..9933
                     /gene="glyS"
                     /locus_tag="ACJE1S_000290"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HGG0805863.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLVSDFKF
                     YYTPRRLVIFHKNFASKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEVLGEMIHQFLKSLNFGKSMRWGANSFEFIRAIRSI
                     VCILDDNLVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRK
                     ERILKQFKLLESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSM
                     RENQRYFAVFNEKGLSNHFIVVSNAVCDDYSKIIHGNERVLRARLSDAMFFYQNDLQS
                     GLNPEKLAKMTYLEGLGTMQDKSLREIKIAEVLCQILNNDKIANISTAIKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLASHYKNFD
                     MQILKDFIFERLYTFYSVNASFIKAVLSSKSTDLIHINQSVKALIELSKKANFQENFT
                     TFKRLANIANKTSHKVDENLFVEEAENKLYKAFKEKIQAHSLQEKLENLFSLKPFIDE
                     FFDKVMINAKDEKLKNNRQTLIYEIYEEFLKIADLKELSL"
     gene            9930..10751
                     /locus_tag="ACJE1S_000291"
     CDS             9930..10751
                     /locus_tag="ACJE1S_000291"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HGG0805864.1"
                     /translation="MKAFFLFLSLALWLFGAQNFELIKGQALFLELDKKDFISLKNED
                     KILATFPHPKNQEKILAIFSLPYKNPPQNTKLTALYKNKKEEIFIKTLEGNYKSEKLS
                     VENKKVFPPKAVKERIAKEFKEANAIYSSYTPKALFDGSFNTPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAAVGTPIYAANSGVVKIAKDRYFAGKSVVIDHGFGIYSQYYHLS
                     KIEVKVGQKVKKGDFLGLSGATGRVSGPHLHFGILAGGKQVDPLDFISKFNTLFQ"
     gene            10748..11698
                     /locus_tag="ACJE1S_000292"
     CDS             10748..11698
                     /locus_tag="ACJE1S_000292"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HGG0805865.1"
                     /translation="MKFSEFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLDLIDKKVLKLPLELVEIGANEGYLSRDFLAALLEFRPEIFSKLSFFIIEPHEKLR
                     NLQKKTLEGVEFTHKRSLKECHFENAFFFCNELFDSFTCELIDDDKMAFIKDFKLVFE
                     PMEAKLKEKCEILNLKKGELSLELEEFFKDLDKASKKFIFASFDYGVFNPQQFSIRIY
                     QKHEVFNPFEITLKDFFGKSDLTYNVNFNQIQQLIKEHDFKLLALKKQNQALIDFGFE
                     ELLKYIKDKNLKTYENFLSQSKILFFNFDEKFHFFEFAKF"
     gene            complement(11798..12217)
                     /locus_tag="ACJE1S_000293"
     CDS             complement(11798..12217)
                     /locus_tag="ACJE1S_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine synthase"
                     /protein_id="HGG0805866.1"
                     /translation="MGSIKSHRKKFPQILSNGCKYYRNDYNYKIGESNFNFKDKPEFA
                     YYEDQFKAYMGEENYKKLRPYLGMTTYYVCEGKKYPVVFSTMIDYKVKNYGLFGDEGR
                     GFSFSSISRKSAGGGSFHYFTNGKFIKSDEKYTGQSY"
     gene            complement(12604..13926)
                     /locus_tag="ACJE1S_000294"
     CDS             complement(12604..13926)
                     /locus_tag="ACJE1S_000294"
                     /inference="COORDINATES: protein motif:HMM:NF017985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HGG0805867.1"
                     /translation="MRAIFVLIFLALSNLYSCALCATYTPNVDVNLDFNMSNEKIKQV
                     DISWEFSEEFFNVLLENYDFNYNDKFDPDELEIVKYTLLDYIKPKHFLTQFSFNGLEE
                     NINIKQFKNPKLQIKSPRLFFSYQVVLDMPIKDYNTFSIKIHDDGGFFNFNIKNQNSI
                     SLNSQNYIISSIDSSTASFEVYQGQLPQDVYIDNTPSPSPSKNFLEKLIEFNNTLFAH
                     IKDILRKEFDFKSFLILLVISFAYGVFHASAPGHAKMLTSSYFLTHKSTPLKILYFVS
                     RIGVIHILSAFLLVSVGVVLLEHLLKDVNNEAGFVLTKITSLFIIFIALFMISKKILS
                     DKKQCCCAHHKSNEWGIILSAALVPCPGVVLLIVFAYEFSFWYALSSAIFITLGMCLV
                     LFAFALGANQFYKSISHTKIRIFLEYFGLIVMFLFGLFLFINIKTNAL"
     gene            complement(13923..14792)
                     /locus_tag="ACJE1S_000295"
     CDS             complement(13923..14792)
                     /locus_tag="ACJE1S_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HGG0805868.1"
                     /translation="MLRILLLSVLCVFAFGKPIISVSIPPQAFFVEKIAKDSVEINIL
                     IPPNSDEHTMEFKPQALKKLEQSEIYFLADLELEKILEKKFKSVLKNVKIVNINEGIH
                     LLEGGHDHEHEHDHDHDRHHAEEHDEHNDPHVWLDPILVKKLAQNITQALVQSFPNNK
                     EFYEANLANFLKELDQMDAQIAEKLKNIKRNEFIVYHPSWAYLAKRYNLVQIPVEIDG
                     KEPKSKDLQNLIKLAKEKDIRVIFVQPGFPENSAKVLAKELNAQIVSINHLARNWDEE
                     LLKSIQALSSALQ"
     gene            14925..15269
                     /locus_tag="ACJE1S_000296"
     CDS             14925..15269
                     /locus_tag="ACJE1S_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HGG0805869.1"
                     /translation="MEALELLKKHDIAITDLRVELLQILSLAKTPLSYDHFDIKANKT
                     SFYRNMELFEKKGIVSKSELNRKSFYELADHAKAHFVCDKCHKISDVQMPKVKGTIKS
                     VLIKGICSDCEK"
     gene            complement(15324..16172)
                     /gene="lepB"
                     /locus_tag="ACJE1S_000297"
     CDS             complement(15324..16172)
                     /gene="lepB"
                     /locus_tag="ACJE1S_000297"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HGG0805870.1"
                     /translation="MNFLKKLYKFSQSWTGTVIIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFDKDGHLIKGQSPQRGDIVVFRNPKNEKE
                     HFVKRCVGVGGDRIVYANKTLYVRMHEGDEFMKEHYPDDLATLGGQIYVKEPYRQKGI
                     HYDLNKDIESDILRFLSVGKFAMSPTYFKELGNNIGFSGGNAYVFDVAEEEYFMVGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDQDKNVRWERIGRFVDTLENEEEYIHDHD
                     DEDKLS"
     gene            complement(16173..17030)
                     /gene="folD"
                     /locus_tag="ACJE1S_000298"
     CDS             complement(16173..17030)
                     /gene="folD"
                     /locus_tag="ACJE1S_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HGG0805871.1"
                     /translation="MTLLDGKALSAKIKQELKEKNKMLKENGVETCLAVILVGNDPAS
                     QTYVNSKAKACEECDIKSLVYRLDENTTQNELLALINTLNHDDSVHGILVQLPLPKHI
                     SKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYDINLEGLDS
                     VVIGASNIVGRPMATMLLNAGCTVSICHIKTKDLSAYTQKADLIIVAAGCVNLLRADM
                     VKEGAIIIDVGINRLENGKIVGDVDFEEVSKKASFITPVPGGVGPMTIAMLLENTVKS
                     AKNSLKSGI"
     gene            17108..17455
                     /locus_tag="ACJE1S_000299"
     CDS             17108..17455
                     /locus_tag="ACJE1S_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG0805872.1"
                     /translation="MKAVLIFLGAILNLFASDFITLKEYSKMLYENPRGISCKKCHGN
                     DGSEQTLGFYMKNGVKTAYKVPSIQNLSFEEFQNSLNQDKDAKSIMPNYSLTNDEIIT
                     LYNYIKQSKKEQK"
     gene            17452..18726
                     /gene="hemL"
                     /locus_tag="ACJE1S_000300"
     CDS             17452..18726
                     /gene="hemL"
                     /locus_tag="ACJE1S_000300"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HGG0805873.1"
                     /translation="MTNKKAFKIACSLIAGGVNSPVRAFTNVQSEPRFISHGKGAHIF
                     DIEGNSYIDYVQSWGPLLFGHCDKDILKACNEALKKGSSFGAPTLLETQLAELVLEDF
                     PHLDKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLADVAKHTLVATYNDIESVKELFEKNKDIACVIIEPIAGNMGLVPGKQDFL
                     EELVKICKENDTLLIFDEVMSGYRASYLGSYGINHIQADIVTFGKVIGGGLPAAAFAA
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLSKAKKKKDLYTKLGKLAKRLTKGM
                     KELANERGVALQTCYIGSMFGYFFTQDPVYNYKDALKSDLKLFSKFHQNMLKNGIYLA
                     PSQFETGFICAKMNKEHIDKTLQSTHESFKKL"
     gene            18723..19028
                     /locus_tag="ACJE1S_000301"
     CDS             18723..19028
                     /locus_tag="ACJE1S_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HGG0805874.1"
                     /translation="MSENSNKRQKIIRKTIEAADGLSLGISMVVAILIGIGVGYLLKK
                     FTPYPWLFWLGVFWGVAAAILNVYKTYKSQVKSYGEFQQRDEFIKEKIRQKEQDNGK"
     gene            19018..19521
                     /locus_tag="ACJE1S_000302"
     CDS             19018..19521
                     /locus_tag="ACJE1S_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805875.1"
                     /translation="MENKKAFFIILCLIHVLFYCILVIFKWINLNIILSYEFAFFSIL
                     LIVFTSYSNYKKFILAQAKNHQKDFIYPSLFYIKKIEKLPRIVKFISIKDDLSLNFKD
                     RLRFFTLFFALFKLIAYGVLVAGFLFLHRQDKLDILSYICGISSLLVCVFIFMLYIRR
                     YESKKNH"
     gene            19499..20686
                     /locus_tag="ACJE1S_000303"
     CDS             19499..20686
                     /locus_tag="ACJE1S_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805876.1"
                     /translation="MSPKKIIRSMTALFASMTFLFAGNALIVSSIGVILKENKESSLA
                     VGVLSSCFFIGALIGTIGAHKIISRIGHIRSFGLFGAVFGISAMLHTLSENLVFWAIL
                     RFFIGICYYGLLMVIESWLNEKSKNAVRSRILGFYEIVFYLAFGIGILIIALDLNKHN
                     IFILSAALILLSSLPLNLIKIKEPVLPAPSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFGAQEVSYFMFCGVLGGFLAQIVVGSISDKMGRKFAIITCSSIGFF
                     TMLIFAFFKLHLYMQYFLGILLGIGVFCLYALALARANDMLTNKNQGVELGRGVLFCY
                     SLGSLFGPLILGFLIQYFNTDGFVWFYIASLGFLILFAVNKPNILNKKFKKKPGNMVM
                     LDD"
     gene            20679..22988
                     /locus_tag="ACJE1S_000304"
     CDS             20679..22988
                     /locus_tag="ACJE1S_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HGG0805877.1"
                     /translation="MINTQLTSQIANAQKNDIKTDSGISKDKLNSKDNPKEALSQALK
                     QNLGLSKNASDEEVLTRFVQNETSAKLKELVNKLLDQINAQKNPDSPILKQGKNLNLA
                     PNFANELKVLSTELAKSDTFTQVLDKLNQILKPASEIKNSNLAPLLKNSGIFFEAKLK
                     DALNEELLPKSFHSLISMIKSLSSEKIGAQIAQLANANLSPKDTLKELRNIIYSNKNE
                     NKQILNQSAFKALLNLSSKLENFKNYITKNPSHTQEKILPIASKIAKELNAIKNDFFK
                     ALNRPENLMIKDTELLKQSVKAFEKLENTLKNILGDHFPKTPQKESILESLLNHKENI
                     KNENIKNELIKNENIKEDIKAQNEDINKNDEYTKDESPDSSIKQEESEEKSPQVPKKE
                     NSLDDNDADIKQDIKKEENLESQEDFHPKEDQNLDSKTENRKDNTQDSKNKTEENQAE
                     NNTKNSTSNQDKIKDEKQEKIKENITKENPKFYETKTENKTSANTHNPNNTQNTQQLN
                     NQTAQNIIKNQEFIKQNIVKNLAFSVENLDLEQVQDLSKSLSNLSRKVNESLKELEPH
                     TQNAKLNQAELKTLEHKLNLSIKDLAQIKPKTEQDIAESLHHDVKSTLLQISNLAKNE
                     GNEAVYNQANRLLAQIELNQLMSLANDSINTYLPFFWEDLDDSKIMFRRGKKDKFFAQ
                     IKLEFAKLGDLEILISLNNDKYIDINIMAENVEFRKTIYENAHELKRNINKAGLLSAN
                     FFVGDIIRSKFDTRNAKNLDLEMGMDKKV"
     gene            22985..23266
                     /locus_tag="ACJE1S_000305"
     CDS             22985..23266
                     /locus_tag="ACJE1S_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HGG0805878.1"
                     /translation="MSKIKKSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(23263..24063)
                     /locus_tag="ACJE1S_000306"
     CDS             complement(23263..24063)
                     /locus_tag="ACJE1S_000306"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HGG0805879.1"
                     /translation="MSFSNESSRIFGLIAGVEFPSFIQKIINEKYVNYFKIDMSEFKA
                     PCEYESLNALFTRSLQIPREINEGFISPSDGKILECGSAFLADNALFAFSIKGHTYSI
                     EELLKDSFKKEELENGLDYVNIYLSPRDYHRYHSPCNMQILSATYTSGALYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFKFDTSIQTNAKFSHNFTRK
                     YENLELKKGEELGNFELGSTIVLIAQKGLLDIKLKAGQNVKFGEKIAD"
     gene            complement(24060..25184)
                     /locus_tag="ACJE1S_000307"
     CDS             complement(24060..25184)
                     /locus_tag="ACJE1S_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HGG0805880.1"
                     /translation="MIFFIFSFVTLLIFGLANIYIYKRLIKKIFIFKYLYKIFAFVFT
                     LLFLAQAIFLIFRRNEYLSDTWYEFLAALYAPTYCLFFITLGLDFIRLILMLMGKMHK
                     KYSLALRSVFDLTIISLAVVLIYISINNAIRVPEIQSTDIYLAKLDRDLKIAMLTDIH
                     LGKNLHKDFLDRLIVEVNLQKPDMVVIVGDLVDTNPKELQNYISRLNDLKSTYGTFYA
                     LGNHEYYHGVDEVLNLLKEYTNMKILLNQNLDLGFINIAGLGDLAGLSKGLYAPDLAR
                     VKVDLNTSKASILLAHQPKTALLYNLSDFDLILSGHTHGGQIFPFMFLVKLHQGFIRG
                     LYDLGENTKLFVSSGAGFWGPSLRVFAPNEIVILNLKGEK"
     gene            25270..26565
                     /gene="gltX"
                     /locus_tag="ACJE1S_000308"
     CDS             25270..26565
                     /gene="gltX"
                     /locus_tag="ACJE1S_000308"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HGG0805881.1"
                     /translation="MYRFAPSPTGDMHIGNLRAALFNYICARQKNMDFILRIEDTDKA
                     RNITGKEEEIKEILHLFGISWQHYYVQSENLKFHRQMALKLVSEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCQNLADIDVLKCEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVSCIIRGEDHVSNTPKQEHIRASLGYDK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIEWFDISKISKAPARFDLKKLLQINREHIKMMADNELNTALNLNKDLAQLAKFYT
                     QEASTIKEIKEKLEAIFGAKDFNEFEPECKILKDLLSQIEPFESYEEFKSYLLEKSQL
                     KGKKFFMPLRIILTGNTHGPELSDLYPYIKNYINELARI"
     gene            26569..26850
                     /locus_tag="ACJE1S_000309"
     CDS             26569..26850
                     /locus_tag="ACJE1S_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HGG0805882.1"
                     /translation="MVVDSLIISIFQVIQIIINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGSIDLAPLIIVLALQFLSIFLGNILRSLL"
     gene            26844..28475
                     /locus_tag="ACJE1S_000310"
     CDS             26844..28475
                     /locus_tag="ACJE1S_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG0805883.1"
                     /translation="MVRKILILLSLSLVFLNASPYNLERLKQEENSIAKDYYIYRLLE
                     KKTISKKEAEGLNSHIFRYVGKIKSELEKIIPVKIFIDPKYAPCYNYTKVNILDANQT
                     CQSVRLNSIAFIASLDNASRSALAQKLSHQRGDLANLLLAFNTPEPIAYIIQKEDVNG
                     FFRLRNYSKKYDFDLNASFANKLPTHVGFKNFAQNIIIKKENPKFRASMLKIDPTFVN
                     EDSAFYLGINALAYNKEELAYNFFAKAAQTFKMQSNKDNAIFWMWMIKKDDKDLQTLA
                     KSSSLNIYSLYAKELTNSEFLKIEVIDSTNKKKNNFNMQDPFAWQKLNKQIREANASE
                     LDRLAKEFDSKETLPIYAYILERKSKFKNHYFIMPYYEYIKNYSAPRQALILAIARQE
                     SRFIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFEPKNAYYFGNHHLNY
                     LEKHLKSPLFIAYAYNGGIGFTNRMLARDDMFKQGKFEPFLSMEFVPYQESRIYGKKV
                     LANYIVYRRLLNDSIKISDIFENLTQNKAGDLNKS"
     gene            complement(28372..28857)
                     /locus_tag="ACJE1S_000311"
     CDS             complement(28372..28857)
                     /locus_tag="ACJE1S_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805884.1"
                     /translation="MKIYTLALAALIFGACSLKEEAVVDANLKTQTLMFAQKYKITQD
                     KMNAIITLSYLNPILDKASEEDIFALTITPDTLKIENLEIFINERKANIEELDEEFFK
                     YLIQNRYTRYLKITLPSVKKEDKIIAKICLNHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            28950..29444
                     /gene="mobB"
                     /locus_tag="ACJE1S_000312"
     CDS             28950..29444
                     /gene="mobB"
                     /locus_tag="ACJE1S_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HGG0805885.1"
                     /translation="MKKSIIAFSGPSNSGKTTLITKIANEFIKQNLKVLIIKHDPADK
                     AQFDVNGKDSFKFFQSGAEVMVLSPTRTTFFSHEKRDILSALKIAPDFDLCLVEGLKT
                     LDLPRISVFYKEIDESYFAFSNAIASYEKIDSYPNLTWLDLNDVQRICNYILKNAKNL
                     QGEL"
     gene            29446..30288
                     /locus_tag="ACJE1S_000313"
     CDS             29446..30288
                     /locus_tag="ACJE1S_000313"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HGG0805886.1"
                     /translation="MQELISYIQKAVIEISNALKFPDTSYSQNQNSTGDTQLKFDVLS
                     DEIITNTLSQCPSIKAIISEEKDEILNINENAKFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLKAALYSMYGARLELVICEDKPKLYRLDKNNEFVFVKDLQMQEKGKIN
                     ATGGTQKFWEEKHAKFIKKLFDEGYRLRYSGAMVSDINQILLKGGGLFSYPATSDAPK
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNHSLLELDFDEIHATTPCFFGSKYEISELLK
                     AYNE"
     gene            30281..30478
                     /locus_tag="ACJE1S_000314"
     CDS             30281..30478
                     /locus_tag="ACJE1S_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805887.1"
                     /translation="MSEIRDEFEQDLDKKKEILSSCQSSKGLKSCYNCDEIFNCSTRK
                     DYVDAVYNSMSKGKTEGGFDF"
     gene            30488..32374
                     /gene="metG"
                     /locus_tag="ACJE1S_000315"
     CDS             30488..32374
                     /gene="metG"
                     /locus_tag="ACJE1S_000315"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HGG0805888.1"
                     /translation="MRYLTTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRLLT
                     GTDEHGQKIEQAAKIRNSTPKEYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFAKSQLINECGCPDCGKDTSLLKEESYFFK
                     LSKYQDKILQWYDKEDPILPKNKKNELINFVQSGLKDLSITRTSFDWGIEIPEEIKDD
                     KHIIYVWLDALFIYISSLDYQSQGENAKFWPAHIHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGLEAFRYFLLREVPFGNDGDFS
                     ESVLINRINTELGNEFGNLLNRIIGMSIKYNQGNISQEGVLEFYKNELDTAKEHLDNA
                     INFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKANKIKEANALIGLCANILAKT
                     SLLLSPTLPKSCQKVGLALNFEISPTNYQKLILQNELLDFKASACEALFPKIEKPLLS
                     QEEKQEVKKEEKPKIKIDDFAKIEIKVAKVIDCQNIEGSEKLLKFKLELDNKEIRQVL
                     SGIAKYYKASDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLISPEQLVENG
                     SLVG"
     gene            32376..33323
                     /locus_tag="ACJE1S_000316"
     CDS             32376..33323
                     /locus_tag="ACJE1S_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805889.1"
                     /translation="MNISNLSELIHANMLNEGSVLSVTGFALSLHELKNGFAFFSNNK
                     KEIIQAVQKGAFAIISEHELCIDDKEIYYLQVDNLESALIKLLRFLCEEKECEFIALQ
                     AYELGICKAFSLNILKGNIFVDFNSLIKAKKGEIFCFSDENYLLQLCASLTILKEANF
                     TLLSRSSFFFTTLVCDNLYFKNLNLPFIYAKIFAKIMFYLKEKNTKMSFDFNKIDDFK
                     IYFMDENFNISEFGSSARAFIIVSNQNTFDFWQENFKNIKGFKTALHNSLFCDFSYDK
                     LLDLKNLKNFKYCLLLEDYEAFEREFKNEENQSPSLFLN"
     gene            complement(33296..33772)
                     /locus_tag="ACJE1S_000317"
     CDS             complement(33296..33772)
                     /locus_tag="ACJE1S_000317"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HGG0805890.1"
                     /translation="MFKVYYKIPFCYLSLHSNGDFLTKIDFCDRLDIENTCPLLEFAK
                     EELRLYFAKKLQKFQTPLWIQGGDFEQKVYKELINIPYAKLVTYKEIAININHPKAFR
                     AVGNANSKNLIPIFIPCHRVIASNGLGGYNGGLAIKRFLLECERVDLSQFKNKLGD"
     gene            33827..36373
                     /locus_tag="ACJE1S_000318"
     CDS             33827..36373
                     /locus_tag="ACJE1S_000318"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HGG0805891.1"
                     /translation="MSFMQDYNKLVEERAALGIPPLPLNAEQTKELCELLKTQNDEKL
                     VSLLQNRVNPGVDDAALIKCEFLDGILKNKFQAPAIDKKLALKMLETMLGGYNVKVLI
                     DALKDESIASDAAEVLKNIIFVHDNFHTVAELSKSNNHAKAVLESWANADWFNKKEKL
                     PQVIQCVVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIDGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVSNLEMGDEFEIHPYEGKIVKNGSVVAEFKLSPNTILDEVRAGGRIPLI
                     IGRGLCAKAREFLGMENENIFTKPEQPEASSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     RTLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYEDK
                     ATLARRADKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTK
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSDKLSDAHKANIYKYLNFNEIDNFKLDN"
     gene            36432..37673
                     /locus_tag="ACJE1S_000319"
     CDS             36432..37673
                     /locus_tag="ACJE1S_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HGG0805892.1"
                     /translation="MRLLFILFCCFLGLKAENLITCDYIKNNKAQVFQDSPKQDYLDI
                     ASTCDFSLKNQAFTKRLYQLANEIRGGNAACSGIEYFPKLQEFDFLLLKISIDPIEYQ
                     KGLDAPENLEKKYTLLRSYFRYWAYQSIGNFRLYQEFWQEYNNAIEPLEQYFENNFKF
                     DKGSNIYYTTNALNEFLNWAVGETKIYKDISPLAKVLSNKKHSITYIQDFIYTNNLNR
                     DELTIGLQAALLNQRNKDILNLLIRLGARIDEGYENALFYALENYDNTKFLLELGLNV
                     NSANTFGKTPLFYAIEFKRKDIVSLLLEYGTDVNKKYINDNEKLALSANIGGNTPYFI
                     TFCALEHTSKNVLMHAAAYGDVEILKMLVAKGADINEIDDLGFNALDFALAANQKDNA
                     NYLQSLGLKPNENLIYGGSLE"
     gene            37670..38419
                     /locus_tag="ACJE1S_000320"
     CDS             37670..38419
                     /locus_tag="ACJE1S_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HGG0805893.1"
                     /translation="MKTAFITGASSGFGHACVEAFIQEGYKVIALARRKDRLDELKAK
                     YKDQIHILCLDVRKQEEIFKAVENLPNDFKEIDVLFNNAGLALGIDEFDKLSIEDIDT
                     MVDTNIKGLLYVAKAIIPILRKQKSAYIFNLGSVAARNPYFGGNVYCGTKAFVGQFSR
                     ALRNDLRGENIKVTNIAPGLCKTEFSEVRFKGDKAKADAVYEGTQYISAQDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIEQNQ"
     gene            38416..40146
                     /locus_tag="ACJE1S_000321"
     CDS             38416..40146
                     /locus_tag="ACJE1S_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HGG0805894.1"
                     /translation="MRFLVFFLLPLLAFANTHQATANANLFGVFTLIPPLVAITLAFI
                     TKDVILSLFAGVLSGTFLLSLASNIFQADSLSFIHFYNTAIDSFSKIISYILESTSDP
                     VNAGIILQILCIGGLVALITKMGGAKAVAIKFAKRAKSAVSAQVNTWFLGLLIFFDDY
                     ANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKNAYED
                     IGISNISAFGVFVETIPYRFYNIFMLFFVLMTALMGREFGPMLKAEIRARTTGQIAPL
                     SKSSTLDTAELEDQFLAPKEDIKIRALDATIPILTLIVLAILGFYFNGLSTLEGEELL
                     KANANPLSFETLRLAFGSANSSVVLFQAALFAAIVAIFIGVYRKIFNFKEAVETWIYG
                     WKTMIFTIVLLLFAWSLSSIVKELGTPEFISSLLADKLPEFILPATIFAFASLISFAI
                     GTSYGTMGILMPLAVPLAYKVAQINAMDMDAMHHYMVINISCVLTGAIFGNHCSPISD
                     NVILSSMSAKCDHMEHVRTQIPYALFICVISLFAGYIPVSLGLSVWLVLPLNLILIAF
                     LLRIIGKKVS"
     gene            40143..41231
                     /gene="trmA"
                     /locus_tag="ACJE1S_000322"
     CDS             40143..41231
                     /gene="trmA"
                     /locus_tag="ACJE1S_000322"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HGG0805895.1"
                     /translation="MSLQEFGNFLKLEEKASFIKEFFKDFYQGNFELFSSKDKHYRTR
                     AELSFYHDKDEIYYAMFENKKKIIIESLEFADEKITAFMPKLLKQIRNNTNLKEKLFG
                     VEFLATKNELSTTLLYHKNIELIYNDLNNLSLELDANLIARSKGKKLVFKKENLRQEL
                     DIQGRKIFYEFNNDCFIQPNTSINEKMITWVCENLKTQERKDLLELYCGYGNFTLALA
                     IFFNNVLATEISKSNINFALLNCKINNISNIHFTRLSSEELSQALKKEREFFRLKDID
                     LDNFNFSHILVDPPRAGLDKSVIDLIKNYENIIYISCNPISLKENLKELALTHKVEKF
                     ALFDQFVNTPHLECGILLKSLHSKQSSI"
     gene            complement(41243..>41651)
                     /locus_tag="ACJE1S_000323"
     CDS             complement(41243..>41651)
                     /locus_tag="ACJE1S_000323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HGG0805896.1"
                     /translation="VQAYPYILIIHLSCAIFFIGYLFVDIFILNTIKRKNPNFDKNLF
                     SSVGVKIMPFIVLLLFLSGGAMISFHLNPLNLIFLIKLILAFSILSLVVFSLFFHFVL
                     KRKNPLTRFIHPFVFMLCIFIVVLAKLMNYYFL"
BASE COUNT        14931 a         6518 c         6504 g        13698 t
ORIGIN      
        1 cgcaaaaatt tacaccatgc tccataatga aaatacaaac ataaaataaa taaatttcat
       61 atttcaaata ctaagaattt atatcaaaat ttgctattta aaagataaaa aataaattaa
      121 aaaactgata tgattataac attgggtttt ggtatgataa aatatactta attccataac
      181 ttaatatttg gatttattaa aaaataaaat atgattttat agagagttaa aagtggctcc
      241 ggatgtagga ttcgaaccta cgaccaatcg gttaacagcc gactactcta ccgctgagct
      301 aatccggaat atcttaaaaa gtaaaatgta attatatttg atttttaaaa ctttgtcaag
      361 cattttttta aaaaaatgca aaaaatattt tattctttaa cgataatact ctttaaattt
      421 ctaaaataaa ataaatttac accctcttca taatcataat caagcttcat tccatgagat
      481 tctaaaatag tattgactat gtaaagtcca agtccaaagc ttgatttttg cttcgagcct
      541 ccttgggtaa aagcttgagt ataatactct aaagtgttat ttaattcagg acctctattt
      601 ttaaaacaaa tataatcatc cattatatcg atttgtataa agccattttc agaatgctta
      661 ataccattat caatcatatt tttaatcgca gtggtaaaaa gcttgaaatc tacatttaca
      721 aaaaagcttt catccataaa aatgcgtatg ttattatcat ctcgcatagc aatttctttg
      781 gcttcatcca aaacatctaa aatattgtat tttttgcggt tgataaatgc tgctcctgaa
      841 gtaatctgct ctatggccgc aaattcattg ataagaattt caagacggtt aaatatactt
      901 tctaatcttt ctttgtattt attatcctct agcatttcaa gagttataag ccctttggta
      961 atcggggttt taagctcgtg catcatattt cttaagaaaa attggcgtga ttgattgagc
     1021 ttacgaattt gaacgatcgc ttgataaaaa gcctcactta cttgagaaat ttcatccacc
     1081 cccgtgctta catcttctat atcattaagc tttccttgtg caaatttatc aatttgcttc
     1141 tttaaagctt ttaaaggctt cagtttttta aatatataaa tatagagcaa cacaagtata
     1201 caaatcacgg ctacagctat ggctttaatg ataaaatatc tataggtttg atagtcttga
     1261 tctttgtaaa gatttacctt gccatcaaaa atgatattta aatacacttg tctatcataa
     1321 gagatgattt cgatcaagcc attattgacc tcgactctag ctaacacttc cccgccaaaa
     1381 agaattctac gaatttgtct aacctctaag ataggctcca ttttattgta atttttcgtt
     1441 tgttcttcaa attctctttc actaattatc cctgcaaaat ttaaaagcct tgcgttggct
     1501 attaaagaat atttggtatt taattctcta gtataatttt gctgatcgta ttctataagc
     1561 cacaaaaacc caagaataac actgacacca gcaaaaataa aaataaaagt tatggtataa
     1621 aaaatagatg aacgattcat tgagtcagct tatagcctat acctctgata gaatggatat
     1681 attttggagt ttttggatca tcacccattt tttgacgaat acggctgatg attacatcga
     1741 tgcttttatt gcttgagtct tcactgattg aagaacaatt ataaacaagc tcttcgcgac
     1801 tgacaacacc gccttctttt ttgatcaaat agcttaaaat gtcaaattcc gcattggtta
     1861 aagtcagctc ttgtcctttc attgtgatga tatgcttgta ttgatcataa acaagatctt
     1921 taacgctttt tgctatggcg ctttttgtat ttgaaatgcg tcttaaatgg cttttaatgc
     1981 gcgcttgaag ttctttagga ttataaggct ttggcaaata atcatccgcg cccaattcta
     2041 aagcattaac cttatctgta atatcatgtc tagcgcttga gataataata ggcgtatcat
     2101 actttttacg aatttcctca cacacttcaa gtccatcaag tcctggcaag gaaagatcca
     2161 aaattataag ctgatattct tttaaagcaa gttttgaaag acctatataa ggctcgtgtg
     2221 cgatatcaac tttcatatca aatttttcta aatactcagc cgtaatttca gcaagctcta
     2281 aatcatcttc tatcataagg atatttgtca ttgcattcct tttactgtat ttaatcttag
     2341 tttttaaatt ctaaactaaa ttatataacg aaagggaaac cctttcataa aaattattta
     2401 agtatcaaca aagttgcaaa accattacga taaacccaaa ttttagtaaa ttcttttttc
     2461 ttcacttgtc ttaaggcttg ttctaaatct tttaaatttt taatttcact ttgtcctacg
     2521 cctataatga tatcaccctc tttaaatcct gaatccttag ccctgctctt atctttaaca
     2581 ctttctacaa aaaccccatt tacatctttt ggaatttgca aacgctcttt aaatcttgga
     2641 tctaaatttc ttaaagtcat accctcgatc aaatcatttt gaacggcttt aggattttct
     2701 ttttctcctt taaggataaa atcaaccctt ttattttccc catctctttc aaaatcgagt
     2761 gaaatttttt gacctatctc taaagtgcct atatagtttt taagatcgct tggactttta
     2821 atcactttat catttacctt agttaccaag tccccacgct taagtcctgc ttcatcagca
     2881 cttgaaccct tttgtatatc ggtaattaaa gcaccatctt gatttttata agctttttta
     2941 gtatcaccct gtaaagcaga aatagttaca cccaaaaatc ctctatcaat cctacccttt
     3001 tcaataagct ttttagctat atctttcacc atattcgaag gtattgcaaa gccgatgcca
     3061 ttatttccac ccccacgaga aagaatggct gaatttattc ctactaaaaa tccgcgacta
     3121 tcgactaaag cgccgcctga atttccagga ttgattgaag catctgtttg gatgaaattt
     3181 tcatattggt ttaagcctat attatcttta tttaaagcag aaattatccc gcttgtaaca
     3241 ctaaatccaa caccaaaagg atttcctaag gcaaaaacaa catctccttc cattaaatca
     3301 tctgaatttg taaaagtaat agcccaaaga ttgtttgctt ctattttaat cactgctaaa
     3361 tccgtctttg gatccttgcc tataagcttg gctttatatt ctgtatcact gcctggcaaa
     3421 cttacactga tagtatctgc atcatctact acatggttgt ttgtaacgat ataaccatct
     3481 tgcgaaataa tcacacccga gcccaaagag cttaccactt ctttatcatt tcctcctctt
     3541 ctttgtggaa aatcaaaatc aaaaaattgt ttaaaataag ggtcgttaaa aaaatcatct
     3601 aaaggacttg gacgattggc tcttgtaatg gtttttgaag tagagatatt tacaacagat
     3661 tttttagcat ctcttatcga attatgataa gaaagaacta catctccagc cgcaggattg
     3721 acacgattgc ttgttatact tgtttcatta aaattgatat ttgcagcaaa taaagcactt
     3781 gctaaactca atgataaaat aagctttttc attttgtttc cttttttatt tatattattc
     3841 ttaaaacata taatttgtaa aatattttac gcatttcata agtataaaac cgaaaattta
     3901 caaaattgta aatgaaagct tgagtgataa aaatttataa aacttgattg acttaggcta
     3961 aagtttttga tataatttct attaaataaa acaattatat attttttaag gaataacatg
     4021 aatagcttat atgaaacact tggagtatct aaaaatgcta gcgcagatga aataaaaaaa
     4081 gcctatcgtc gtttagcaag acaatatcat cctgatatca ataaagaaaa aggcgctgaa
     4141 gaaaaattta aagaaatcaa tgccgcttat gaaattttaa gtgatgaaaa aaaacgcgca
     4201 caatacgatc aatacggaga ctccatgttt ggaggacaaa gttttcacga tttctcaaaa
     4261 aatacaggtg gggtcaattt agatgatatc ttaaaagatc tctttggtgg aggctttggt
     4321 ggaggctctt ctagaggaag tcgttttaat ggtttttcat caaaaggctt taacaccggc
     4381 tttggaggtt ttggcggatt tgaagaagag gatttggatt ctactataga acttagcatt
     4441 ccttttgaaa aagcagtggt aggtggagaa tatagcttta atcttcaagg agaaacgatc
     4501 aaatttaaga ttccacatgg gatcaaacaa ggagaaaaac ttagaattcg taacaagggt
     4561 aaaaatggcc gcaatggaac acgcggggat ttgattgtta aagttaaatt aggagaaagt
     4621 gaaatatatc aaagagaaga tgatgattta tatcaaaaag ttgatatctc tttaaaaact
     4681 gccctatttg gtggaaaagt caccgttaat actcttaagg aaaacaaaaa agaagccacc
     4741 ataaccatac ctgcaaattc taaaaacgga caaaaaattc gccttaaagg ctatggggtg
     4801 caaaatcgca aaagtgacat ctatggagat atgtatttgg tattaaatgt tgttttacca
     4861 aacactgaaa ccttagatga gaaattaatc gaaatgctaa aagaaaaact atcataaaaa
     4921 aaggagtaaa gtcatggagc accattataa tgaacccgta tatttaataa gtgtcgtagc
     4981 aaaagtatta agcatacatc cacaaaccct aagacaatat gaaagagaag gtttgataga
     5041 acctagtaga actgatggaa aaataaggct ctattctcaa agggatatcg atcgtatcaa
     5101 gcttatcttg cgtttaacgc gcgatatggg ggtaaatttg gcaggagtag atgtgatttt
     5161 aaagcttaaa aatcaacttc atgaatttga aaatttaatc gatgagctac gcttagagct
     5221 tagcaaacaa caaaatccaa atgcaagctc aaaagcagtt gtaaaacata aaaatagttt
     5281 tgatttaatt ttttatgaaa aaaaatagat ggataatttt ttagaaattt ttttaattac
     5341 agctgctcta gctatcgttc ttaatgttat tttcaagaaa tttgaaattc ctactattat
     5401 cggttacatt gctgcaggag agattatttc taaaatttat catctaagtg gcaagggtga
     5461 gattacacat attgctgaat ttggtatagt atttttaatg tttactatag ggcttgaatt
     5521 ttcttttaag catttaatag ccatgaaaca agaggtattt ttaaatggct ctttacaaat
     5581 gcttacttgc ggctttgttt ttatgttgct agctatagga attttaggac ttggtgataa
     5641 aagcgcaacc atagtaggtt ttgctctagc tctttcttca accgcagtgg tgcttaaaat
     5701 tttaaatgat aatggcgata ttaatgagca atacggaaga aaagccttag ggattttact
     5761 ttttcaagac atagctgtga ttcctttgtt attgcttgtg gatattttct cttcaaataa
     5821 tcaaaacata ggacaattac tccttacaac tcttctttca gcagttatct taatcgcttt
     5881 acttttcttt ataggtaaat acttagtcga taggatattt agactgatta tacgcgcttc
     5941 ctcgcaagaa atttttatca gtactatact ctttatggtg attggggcaa gctttttggc
     6001 aaattatttt ggtttttctt attctttagg agcttttatc gcaggagcct tgatagcaga
     6061 aactaaatat aaacataaaa tcgaagcaga cttaatccct tttagagatt tactcttagg
     6121 cttatttttt ataaccgtag gaatgcaaat tcagcttcat atcgtagcac aaaattggtt
     6181 tattatctgt gtcttaacct tacttataat gggtttaaaa tttggcatag tatgtggttt
     6241 tttattttta tataccaaaa aaagagtggc tttaaaaact gctttttcta tcgctcaagt
     6301 tggagaattt gctttggcaa tcttctcgct cttgcaagca aaaagtatgc tagatgttga
     6361 aactgctcaa attttgattg ttgtttctat tgtaactatg attatcaccc cttttgtatt
     6421 aaacaatata agaaaaatag ccaatgtagt agaagatatg actttaaaca ctaatgttgt
     6481 tcagcaaagc actcacagca ccctaaaaaa tcatcttgta atctttggat acggacgctt
     6541 aggacaagag atagtgcaaa aaatcaaaaa tactggtgtt ccttatttgg ttttagaaag
     6601 tgatttaaat ttggtagaac ttggcataag tcggggtgaa aatgtcgttt ttgccaatgc
     6661 tgcccaagaa gaaacactca agatagccaa tataacagaa tgcgcagtag caatcgtaac
     6721 cataaccaac gaagccaaac tcgaaatgat ttgtcaggtt ttagcttctt atccaaagcc
     6781 tattgataca attatccatg ttaatggtag tcttgaaaag atactttttt caagtatcga
     6841 tgaaaacata cgcattgtaa gatctgaaaa agtcatcgca agaaatttag tccaagaggc
     6901 tctagaatgc agaattcaca aaaatactta aaggatggta ttggcaaaaa tagatgaaaa
     6961 aactctaagg gttaaatatt taagagcctt ggaaaaattt gcaaatgcag ctatttcggc
     7021 tttaaaaaaa gaaaattttg ataaagagaa atttcaagaa agaatggaaa aaaataaaaa
     7081 aatagttgaa aaatgcgagg cggtaaattt aaattcaagc tataataaaa gcttagaaaa
     7141 ttttgtaaat cattgccttg atttttcaaa acaaaaagaa gaacttctaa gccttgcaaa
     7201 tgctttagat aaacttaaaa aaggtgaaaa gaaagaaaaa cataaaactt atttgaagga
     7261 ttattatgat taatgtattt tttgatatgg atggcacctt aatcgacagt gcaaatgcta
     7321 tatcttgtgc tgtcaatgag ataagaaatg aactaaattt aagcccactt tctagggaga
     7381 aaatcatgca aaccatcaat actccaaatg tagactgggc aaaagagctt tatagtatag
     7441 ataatttcca tcattctagc tttaaagatg gttttgaaaa atatttcatc aaacactatg
     7501 agcaaagcgt ggttttattt gaaggggtta aagaaatatt ggaattttta aaagagcaaa
     7561 attgtttttt agctatcgcc actaatgcgc ctcaaagctc gctttctagc atacttaaaa
     7621 aacatgaaat cattccttat tttgataaaa ttttaggtgt aagtcttggt atagaaccca
     7681 aaccccatcc tatgatgcta gatcttttaa agtctgaagc gccccacaaa ataagtgttt
     7741 ttataggtga tagtcaaaaa gatagagaat gtgcgaaaaa tgctaatgtg ccttattttc
     7801 atgcgaaatg gtatcaaaag gatttacaag aaaatgaatt tagcaatgca aacgaactta
     7861 aaaacttttt agagaagtat ttataagttt tttaatgaaa attgagttaa aataaaataa
     7921 atttttaaaa gagtacatat gagtgaatta ttaatagaaa tcggaacaga agaactaccc
     7981 gctattcctt tactaaaaga attagccaat atagaaaaaa aatggaaaga tgttttagaa
     8041 gattatcgct tggtgagtga ttttaaattt tactacactc cgcgtcgctt ggtgattttt
     8101 cataaaaatt tcgcaagcaa acaagaagat agctttgctg aatttatagg tgcacctaaa
     8161 aatgtcgctt ataaggatgg tcaattatca gccgcaggac aaagcttttt acaaaaagca
     8221 ggcattagcg aaaatgagct ttcttttaaa gagatcaaag gtaaagaagt cttgtatcat
     8281 caaaaagcca ttaaaggttt gcaaagccaa gaagttttag gagagatgat tcatcaattt
     8341 ttaaaaagtc ttaactttgg taaaagcatg cgttggggtg cgaattcttt tgaatttatc
     8401 cgtgcaatcc gctctatagt ttgcatccta gatgataatt tagtcgaatt tgaaagctat
     8461 ggtgttaaga gtgctaaaaa aacttttata cacagaagtg taagctatga cttgcaagaa
     8521 tttaataacg caaaagaata ttttagcctt ttagaaaaaa attacattat cttagatcca
     8581 ctccaaagaa aagagagaat actcaagcaa tttaaactcc tagaaagcca aaacaatatc
     8641 caaataggcg aagatgaaga gcttttggct gaagttattg ctatcacaga atatcctaat
     8701 gcacttttag gaagttttga agaagaatat cttcaaattc ctagcgaagt tatcattact
     8761 tccatgagag aaaatcaacg ctattttgca gtctttaatg aaaaaggcct aagtaatcat
     8821 tttatcgtgg taagcaatgc ggtgtgtgat gattactcaa aaatcattca tggcaatgaa
     8881 agggttttgc gcgcaaggct tagcgatgca atgtttttct atcaaaacga tttgcaaagc
     8941 ggcttaaatc ctgaaaaact cgctaaaatg acttatcttg aaggcttagg aacaatgcaa
     9001 gataaaagtc taagagagat aaaaatcgct gaagttttat gccaaatact aaacaatgat
     9061 aaaatcgcaa acataagcac tgcgatcaaa tacgcaaaag ctgacttagc aacgcaaatg
     9121 gtttatgaat ttacagattt gcaaggcatt atgggaagct attatgcaca aaaaatgggt
     9181 ctagattatg aaatttgtct tgctataaag gagcaatacc taccaaattc cgaacaagct
     9241 ccacttccta gcactgaatt ttcaagcata gttgcccttg caaacaagct tgatactctc
     9301 ataggacttt ttagcatagg taaaattcca agcggtacaa aagatcctta cgccttaagg
     9361 cgtgctgcta atgggataat caaaattgcc ctaaatttaa acaaagaatt tgacattcaa
     9421 gcactactag aaaaactagc aagccattat aaaaactttg atatgcaaat tttaaaagat
     9481 tttatttttg aaagacttta taccttttat agcgttaatg cttcttttat caaagcggtt
     9541 ttaagctcta aaagcacaga tcttatccac atcaatcaaa gcgtaaaagc ccttatagaa
     9601 ttaagcaaaa aagctaattt tcaagaaaat ttcactacct ttaaaagact ggccaatatc
     9661 gctaataaaa cttcgcacaa agtcgatgaa aacctttttg ttgaagaagc agaaaataaa
     9721 ctttataaag cctttaagga aaaaattcaa gcacactctt tacaagaaaa acttgaaaat
     9781 ctcttctcac ttaaaccttt tatagacgaa ttttttgata aagtaatgat caatgccaaa
     9841 gatgaaaaac ttaaaaataa tcgccaaaca cttatctatg aaatttacga agaatttcta
     9901 aaaattgccg atcttaaaga gctaagccta tgaaagcttt ttttcttttt ttaagtcttg
     9961 ctctttggct ctttggagct caaaatttcg agcttatcaa aggacaagct ttatttttgg
    10021 aactggataa aaaagatttt atttctttga aaaacgaaga taaaatttta gctacctttc
    10081 ctcatcctaa aaatcaagag aaaattttag ctatattttc actgccttat aaaaatcctc
    10141 ctcaaaatac taagcttacc gctctttata aaaacaaaaa agaagaaatt tttataaaaa
    10201 ctttggaagg caattacaaa agtgaaaaat taagcgtaga gaataaaaaa gtttttccac
    10261 ctaaagctgt taaagaacgc attgctaaag aatttaaaga agctaatgca atttatagtt
    10321 cttatactcc aaaagcttta tttgatggct cttttaatac gcctttaaat tcttttatta
    10381 cgagtgattt tggcaaagca agaaccttta atgaaaaagt tgcaagctat catagcggaa
    10441 cagactttag agccgctgta ggaaccccca tctatgcggc taattcaggt gtagtaaaaa
    10501 tagcaaaaga tcgctatttt gcaggaaaat cagtagtcat tgatcatggt tttggcattt
    10561 actcgcagta ttatcatctt tctaaaatcg aagttaaggt aggacaaaag gttaaaaaag
    10621 gtgatttttt ggggctaagt ggagctacag gaagggttag tggaccacac ttacattttg
    10681 gtattttagc tggaggtaaa caagtagatc ctttggattt tatctctaaa tttaatacac
    10741 tttttcaatg aaatttagcg aattttttca cgcttggctg catgaaagtt attataaaaa
    10801 cgctgttagt ataggcaaaa atggagattt ttttaccgca gtaagcgtgg gaaatctttt
    10861 tggcactctt ttagcaaagc attttttaga tcttatagat aaaaaagtct taaaacttcc
    10921 cttagaactt gtagaaatag gagccaatga gggctatttg agtagagatt ttttagccgc
    10981 tttgcttgaa tttaggcctg aaattttttc caagctttct ttttttatca tagagcctca
    11041 tgaaaaatta agaaatttgc aaaaaaagac cttagaaggc gtggaattta cacataagag
    11101 aagcttaaaa gaatgtcatt ttgaaaatgc ctttttcttt tgcaatgagc tttttgatag
    11161 ttttacttgt gaattgatag atgatgataa aatggccttt attaaagatt ttaaacttgt
    11221 ttttgagcct atggaggcta aattaaaaga aaaatgcgaa attttaaatt taaaaaaagg
    11281 cgaattaagc ctagaattgg aagaattttt taaagatttg gataaagctt ctaaaaaatt
    11341 tatctttgca agttttgatt atggcgtgtt taatccccaa caatttagca ttagaattta
    11401 tcaaaaacat gaagttttta atccttttga aatcacttta aaagattttt ttggtaaaag
    11461 cgatttaacc tacaatgtca attttaatca aattcaacag cttataaaag aacatgattt
    11521 taaactctta gctctaaaaa aacaaaacca agccttgatt gattttggtt ttgaagaatt
    11581 attaaaatac atcaaagata aaaatcttaa gacttatgaa aattttcttt cacaaagtaa
    11641 aattttattt tttaattttg atgaaaaatt tcacttcttt gaatttgcta aattctagca
    11701 tgattgtttt ctttattttt caaatcaagc attgcataac tagcatctgc tatattagca
    11761 tagtctttga tttgagagat aagttcttta ggattcatca gtaactttgt cctgtatatt
    11821 tttcatcact ttttataaat ttaccattgg taaaataatg aaaagatcct ccgcctgcac
    11881 ttttacgact tatgcttgaa aagctaaatc ctcttccttc atctccaaat aaaccatagt
    11941 tttttacttt ataatctatc atggtagaaa aaacaacagg atatttttta ccctcacaca
    12001 cataataagt tgtcatacct aaataaggtc ttaatttttt atagttttct tcacccatat
    12061 atgctttaaa ttgatcttca tagtatgcaa attcgggttt atctttgaag ttgaagtttg
    12121 attctcctat tttataatta taatcattac gataatattt acaaccatta gaaaggattt
    12181 gggggaattt ttttctatga cttttaattg atcccaaaaa tcatccccta aagacatttt
    12241 tttctttgcc tctcctttct ttctttcatt ttccaatatc tcttctctta tttttttatc
    12301 aaagatataa attccaccat aattacttgc aagagtttct atttcacttg ctttttttct
    12361 ttaaaagcac atgtacttaa aaatactaaa gaaaataagc ttagaattat cattgtgatt
    12421 ttcatttaat gctcctttgt ttaaaataag catattataa aataattttt atatgaattg
    12481 attttaaaca ctaagcattt tttcatagtt tataaactac atgcttgctt gttaattatg
    12541 tatgatttga aaaatctaga tttagataaa aaatatttta cccattttat ctagaaattt
    12601 cttttatagt gcatttgttt ttatattgat aaacaaaaac aaaccaaata aaaacataac
    12661 aataagtcca aaatattcta aaaagattct tatttttgta tgtgaaatgc ttttataaaa
    12721 ttgatttgct cctaatgcaa aagcaaacaa tactaaacac attcccaaag tgataaaaat
    12781 agcagagctt aacgcatacc aaaaactaaa ctcataggca aatactataa gtaaaacaac
    12841 cccgggacaa ggcactaaag cagcactaag tataataccc cattcattgc ttttatgatg
    12901 agcacagcag cattgctttt tatcgcttaa tatcttttta ctaatcataa ataaagcaat
    12961 aaaaataata aacaaactcg taatcttagt caatacaaag ccagcttcat tattgacatc
    13021 ttttaataaa tgctcaagta aaaccactcc aacacttacc aataaaaacg cactcaatat
    13081 gtgaataact cctatcctag atacaaagta caatatcttt aagggtgtac ttttatgggt
    13141 taaaaaatac gaacttgtca gcattttagc atgacctgga gcactagcat gaaaaacacc
    13201 atacgcaaaa gaaatcacta ataaaatcaa aaaggattta aaatcaaatt cttttcttaa
    13261 tatatcttta atatgggcaa aaagtgtatt attaaattca atcaattttt ctaaaaaatt
    13321 ttttgaagga gaaggacttg gagtattatc tatatataca tcttgaggta attgcccttg
    13381 atatacttca aaagatgcag tgcttgaatc aatactagaa atgatataat tttgcgaatt
    13441 taggcttata gaattttgat tttttatatt aaaattaaaa aatcctccat catcgtgaat
    13501 ttttatacta aaggtgttat aatctttaat gggcatatct aaaacaactt gataactaaa
    13561 gaacaaacga ggagacttta tctgcaattt aggattttta aattgcttga tatttatatt
    13621 ttcttccaag ccattaaagc taaattgagt taaaaaatgc ttaggtttta tgtagtctaa
    13681 aagtgtgtat tttacaattt caagttcatc aggatcaaat ttatcattat aattaaagtc
    13741 ataattttca agcaaaacat taaaaaattc ttctgaaaat tcccagctta tatctacttg
    13801 tttgattttt tcattgctca tattaaaatc taaatttaca tctacatttg gggtgtaagt
    13861 tgcgcacaag gcgcaagaat ataagttgct taaagctaga aatattaaaa caaaaatcgc
    13921 tctcattgca aggccgaact taaagcttgg atacttttta gaagctcctc atcccaattt
    13981 ctagccaaat gattaataga aacaatttga gcatttaatt ctttagctaa cacttttgca
    14041 gaattttctg gaaagccagg ctgaacaaag ataacgcgta tatctttttc ttttgcaagc
    14101 ttgataagat tttgcaaatc tttactttta ggctctttac catcaatttc tacaggaatt
    14161 tgcacaagat tgtatctttt agccaaataa gcccaacttg gatgataaac tataaattca
    14221 tttcttttaa tatttttaag tttctctgcg atttgagcat ccatttgatc aagctctttt
    14281 aaaaagttag ccaaatttgc ttcataaaat tctttattgt ttggaaaact ttgcactaaa
    14341 gcttgggtaa tattttgtgc caatttttta accaaaatag gatcaagcca aacatgaggg
    14401 tcattatgct catcatgctc ttctgcgtga tgtctatcgt gatcatgatc gtgttcatgc
    14461 tcatgatcat gccctccttc aagaagatga ataccttcat taatattaac aatttttaca
    14521 ttttttaata cacttttaaa ttttttttcc aaaatttttt caagctctaa atctgctaag
    14581 aaataaattt cactttgctc taattttttc aatgcttgag gcttaaactc catagtatgc
    14641 tcatctgaat ttggtggtat gagtatattt atttcaacgc tgtctttagc tattttttcc
    14701 acaaaaaaag cttgaggtgg aatgctgaca ctaattatgg gctttccaaa agcaaaaaca
    14761 cataatacac ttaataataa aattctcaac atagattttc cttataataa aatattttga
    14821 aattatacaa aatgcaactt agttgcaact taaacataaa gttgcaaaca taaagctttt
    14881 ttatgctaca ataaaatata atttatattt taaaggtaaa tcttatggaa gctcttgaat
    14941 tattaaaaaa acacgatata gctataacag acctacgcgt agaattacta caaattttat
    15001 cccttgcaaa gactccatta agttacgatc attttgatat caaagccaat aaaaccagtt
    15061 tttatcgtaa tatggaactt tttgaaaaaa agggtattgt tagtaaaagt gagttaaacc
    15121 gcaaaagttt ttatgaatta gcagatcacg ctaaggcaca ttttgtttgt gataaatgcc
    15181 ataaaattag cgatgttcaa atgccaaaag taaaaggtac gattaaaagt gtgcttataa
    15241 aaggcatttg tagtgattgt gaaaaataaa ataagccaaa tttaagaaag tgattttatt
    15301 tactgcttat acagaaaaca aaatcaactc aatttatcct catcatcatg atcatgaatg
    15361 tattcttctt cattttccaa agtatcaaca aaacgcccta tcctttccca gcgaacattt
    15421 ttatcttgat cccatgaaaa ataaacaaac caaggctttc ctactatcaa acgataagga
    15481 acagagcccc aaaaacggct gtcataagaa taatctctat tgtcccctac cataaaatat
    15541 tcttcttcgg ccacatcaaa aacataggca ttaccaccac taaagcctat attatttcca
    15601 agttctttaa aataagttgg cgacatagca aatttgccca cactaagaaa acgcaaaata
    15661 tcactttcta tatctttgtt taaatcataa tgaatccctt tttgcctata aggctcttta
    15721 acataaattt gccctccaag ggttgccaaa tcatcaggat aatgttcttt cataaattca
    15781 tcaccctcat gcattcttac ataaagtgtt ttattggcat aaacgattct atctccgccc
    15841 actcctacac agcgttttac aaaatgctct ttttcatttt tagggtttct aaaaaccact
    15901 atatcgcctc tttgggggct ttgccctttg attaaatgtc catctttatc aaaatccggt
    15961 aaaactggaa tttcaagcca cggaatatgt ggagttggaa ttccatagct gaatttttta
    16021 acaaataaaa aatcacctac aagcaaggta tttttcatcg aacctgaagg tataacaaag
    16081 gcttgtataa agaaaaagat tactaaaaga acgatgataa ccgttcctgt ccatgattgt
    16141 gaaaatttat aaagtttttt taaaaaattc atttatattc ctgattttaa actattttta
    16201 gctgatttta ctgtgttttc caaaagcatc gctatagtca tagggcctac accgcctgga
    16261 acaggggtta taaaactggc tttttttgaa acctcttcaa aatccacatc gcctactatt
    16321 ttgccatttt caaggcgatt aattcctaca tcaattataa tagcaccctc tttaaccata
    16381 tctgcacgaa gcaaattaac acatcctgct gctactataa tcaaatctgc tttttgagta
    16441 taagcgctca aatcttttgt ttttatatga caaatactta ccgtacaacc cgcatttaaa
    16501 agcatggtag ccataggacg acctactata tttgaagcac cgattacaac gctatctagt
    16561 ccttcaagat tgatatcata agcttttaaa agcttcataa cgccaagtgg agtgcaaggt
    16621 aaaaatccac tttccaaacc taaatttaaa taacccacat taataggatg aaagccatcc
    16681 acatccttac tactgatgat actttctaaa attaaatcct tgctgatatg ttttggtaaa
    16741 ggaagctgaa ctaaaattcc gtggacacta tcatcgtgat ttaaggtatt aataagagct
    16801 aaaagctcat tttgagttgt attttcatcc aaacgataaa ccaaagattt tatatcacat
    16861 tcttcgcaag ctttagcttt agaattgaca taagtttgac ttgctggatc attacctact
    16921 aaaattaccg caaggcaagt ttctactcca ttttctttta acattttgtt tttttcttta
    16981 agttcttgtt taatcttggc gcttaaagct ttaccatcaa gcaaagtcat tcttttcctt
    17041 tataaattta tcactttttt aaagtaaaaa ttgtatcata ttaaaacttc attaacaagg
    17101 tgaaattttg aaagctgttt taatatttct aggagccatt ttaaatcttt ttgcttctga
    17161 tttcataaca cttaaagagt attcgaaaat gctctatgaa aacccaaggg gtattagttg
    17221 taaaaaatgc catggtaacg atggaagcga acaaactcta ggtttttata tgaaaaatgg
    17281 agttaaaaca gcctataaag tcccaagtat tcaaaatctt agttttgaag aatttcaaaa
    17341 ttctcttaat caagacaaag atgcaaaatc gatcatgcca aattactcat taaccaatga
    17401 tgaaattata accttatata attacatcaa gcaatctaaa aaggagcaaa aatgacaaac
    17461 aaaaaagctt ttaaaatagc ttgcagtctt attgcaggag gtgtaaattc tcctgttcgt
    17521 gcttttacca atgtgcaaag tgagcctaga tttatatccc atggaaaggg agctcatatt
    17581 tttgatatag aaggcaatag ctatattgat tatgtgcaaa gttggggacc tttgcttttt
    17641 gggcattgcg ataaagatat attaaaagct tgcaatgagg ctttaaaaaa gggttcaagc
    17701 tttggtgcgc cgactttgct agaaacacaa ctggccgagc ttgttttaga agactttccg
    17761 catttagata aaattcgctt tgtaagcagt ggtacagaag cgaccatgag tgccatacgc
    17821 cttgctcgcg gttttaccaa aaaagataaa attctaaaat ttgaaggttg ctatcacggg
    17881 cattcagatt ctttacttgt aagtgctgga agtggcgctg ctacttttaa ttcaccgagc
    17941 tctttagggg ttttagcaga tgtagcaaag catactctag tagcaactta taacgatata
    18001 gaaagcgtaa aagagctttt tgagaaaaat aaagacattg cttgtgttat tatcgaacct
    18061 attgcaggaa atatgggatt agttcctggc aagcaagatt tcttagaaga gcttgtcaaa
    18121 atttgcaaag aaaacgatac cttgctcatc tttgatgaag tgatgagtgg atacagagct
    18181 tcatatcttg gctcttatgg tatcaatcac atacaagcag atatcgttac ttttggcaag
    18241 gttataggtg gaggcttacc tgcagcagct tttgcagcta gagcagaaat catggatatt
    18301 ttaagtccat taggaggagt ttatcaagca ggaacactca gtggaaatcc tttggcaatg
    18361 gctgcaggaa ttgctagttt atctaaagcc aaaaagaaaa aagatcttta tactaaactt
    18421 ggaaaattag ccaaaaggct tactaaggga atgaaagaac ttgcaaatga aagaggtgtt
    18481 gctttacaaa cttgctatat aggctctatg tttggatatt ttttcacaca agatccagtg
    18541 tataattata aagatgctct aaaatctgat cttaaactct tttctaaatt tcatcaaaat
    18601 atgcttaaaa atggaattta tctagctcct tctcaatttg aaacaggatt tatctgcgct
    18661 aaaatgaata aagagcatat cgataaaacc ctacaaagta cacatgaaag ctttaagaaa
    18721 ctatgagtga gaattctaat aaaagacaaa aaatcattcg caagactata gaagccgcag
    18781 atgggcttag tcttggaatt tccatggtcg ttgctatttt aatcgggatt ggcgtggggt
    18841 atttgttaaa aaaatttaca ccctaccctt ggcttttttg gctgggtgta ttttggggtg
    18901 ttgcagcagc aatacttaat gtttataaaa cctataaatc acaagttaaa agctatggag
    18961 aatttcaaca aagagacgag tttataaaag agaaaattcg ccaaaaagaa caagataatg
    19021 gaaaataaaa aagctttttt tattatcttg tgcttaattc acgtcttgtt ttattgcatt
    19081 cttgttattt ttaaatggat aaatttaaat ataattttaa gctatgaatt tgcttttttt
    19141 agcattttat tgatcgtttt tacttcttat tctaattata agaaatttat cctagctcaa
    19201 gcaaaaaacc atcaaaaaga tttcatttat ccgagtttat tttatataaa aaagatagaa
    19261 aagttaccta gaattgttaa atttatttcc attaaagacg atttatctct aaattttaaa
    19321 gataggttac gcttttttac tttgtttttt gccttattta aattgatagc ctatggggtt
    19381 ttagttgcgg gatttttatt tttacatcgt caagataaat tagatatttt atcctatata
    19441 tgtggaattt catccttgct agtatgtgtt tttattttta tgctgtatat aagaagatat
    19501 gagtccaaaa aaaatcatta gatccatgac agcacttttt gccagtatga catttttgtt
    19561 tgcaggcaat gccttgatcg taagctccat aggtgttatt ttaaaagaaa ataaagaaag
    19621 ctccttggct gttggagtgc taagctcttg cttttttata ggagccctta taggcaccat
    19681 cggagcacat aaaatcatct ctcgcatagg acatataaga tcttttggtt tatttggtgc
    19741 ggtgtttgga atttctgcta tgcttcatac ccttagtgaa aatcttgttt tttgggcgat
    19801 tttaagattt tttataggaa tttgctatta tgggctttta atggtaatag aatcatggct
    19861 taatgaaaaa agcaaaaacg ccgttcgttc tagaatttta ggtttttatg aaatcgtatt
    19921 ttatcttgcg tttggtattg ggattttgat tattgcttta gatttaaaca agcataatat
    19981 atttatttta agtgcagcac ttatcttgct ttcatcattg cctttaaatt taatcaagat
    20041 caaagaaccc gtcttgcccg caccaagtcc tatttctata cctaaaattt ttgatatagc
    20101 tcctttagct attgttacaa gttttatagc tggaatgctt attaatgggt ttttttctat
    20161 ggcgtctttg tttatacttt tacaaggctt tggagctcaa gaagtttctt attttatgtt
    20221 ttgtggggtg ctgggtggat ttttagccca aattgtagta ggaagtattt ctgataaaat
    20281 gggacgaaaa ttcgcaatca tcacttgctc aagcataggt ttttttacca tgcttatctt
    20341 tgcttttttt aaacttcatt tgtatatgca atatttttta ggcattttac ttggtatagg
    20401 agttttttgt ctttatgctc tagctcttgc aagggctaat gatatgctaa caaacaaaaa
    20461 tcaaggcgtt gaactgggtc gtggggtttt attttgttat tctttaggct ctttgtttgg
    20521 tcctttaatt ttaggatttt taatacaata ttttaataca gatggttttg tttggtttta
    20581 tatagcttct cttggatttc ttatcctttt tgcagttaat aaacccaata ttttaaataa
    20641 aaaatttaag aaaaaaccag gaaatatggt gatgcttgat gattaatact caacttacaa
    20701 gccaaattgc aaatgcacaa aaaaatgaca taaaaaccga tagtgggata agtaaagata
    20761 aattaaattc taaagataat cctaaagaag cactttctca agccttaaaa caaaatttgg
    20821 gactaagtaa aaatgcaagc gatgaagaag ttttaactcg ttttgttcaa aatgaaacaa
    20881 gcgcaaaatt aaaagaactt gtcaataagc tcttagatca aatcaatgca caaaaaaatc
    20941 ctgactcacc tatacttaaa caaggaaaaa atctaaattt agcccctaat tttgccaatg
    21001 aattaaaagt cttaagcaca gaacttgcaa aaagcgatac ctttactcaa gttttggata
    21061 aattaaacca aattttaaaa cccgcaagtg aaataaaaaa tagtaattta gcgccattgt
    21121 taaaaaattc gggtatcttt tttgaagcga aattaaaaga cgctttaaac gaggaattat
    21181 tacccaaaag ttttcattct cttataagca tgattaaaag tcttagcagt gaaaagattg
    21241 gtgcgcaaat tgcacagctt gcaaatgcaa atttaagtcc taaagacacc ttaaaagaat
    21301 taagaaatat tatttattct aataaaaatg aaaataagca aattttaaat caaagcgctt
    21361 ttaaagctct tttaaattta agctcaaaac tagagaattt taaaaactat atcactaaaa
    21421 atccaagcca tactcaagaa aaaattcttc ctatagctag taaaattgca aaagaattaa
    21481 atgcgataaa aaatgatttt tttaaagctt taaacagacc agaaaattta atgataaaag
    21541 ataccgagct tttaaaacaa agtgtaaaag cttttgaaaa attagaaaat accttaaaaa
    21601 atatcctagg tgatcatttt cctaaaacac cccaaaaaga aagtatttta gaaagtcttt
    21661 taaatcataa agaaaacatt aaaaatgaaa atattaaaaa cgagcttatc aaaaacgaaa
    21721 atatcaaaga agatataaaa gctcaaaacg aagacattaa caagaatgat gaatatacca
    21781 aagatgaaag ccccgactct agcatcaaac aagaagaaag tgaagaaaaa tcccctcaag
    21841 taccaaaaaa agaaaattca ttagatgata atgatgcgga tataaaacaa gatatcaaaa
    21901 aagaagaaaa tttagaatct caagaagatt ttcatccaaa agaggatcaa aatttggatt
    21961 ctaaaacgga aaatcgtaaa gacaatactc aagattcaaa aaataaaaca gaagaaaatc
    22021 aagcagaaaa caatacaaaa aattccacct caaaccagga taaaatcaaa gatgaaaaac
    22081 aagaaaaaat taaagaaaat ataaccaaag aaaatcctaa attttacgaa acaaaaacag
    22141 aaaacaaaac ttcagcaaac actcataatc caaacaatac tcaaaataca caacaattaa
    22201 acaatcaaac cgcccaaaat atcataaaaa atcaagaatt tataaaacaa aatattgtaa
    22261 agaatttggc ctttagcgta gaaaatttgg acttagagca agtgcaggat ttaagcaaaa
    22321 gcttaagcaa tctttcaaga aaagtcaatg aaagcctaaa agaactcgaa ccccatactc
    22381 aaaatgccaa actcaatcaa gcagaattaa aaaccttaga acataaatta aatttatcca
    22441 taaaagattt agcacaaatt aaaccaaaaa ccgagcagga tatagccgaa tctttacatc
    22501 atgatgtaaa atcaaccctt ttgcaaattt caaatttagc caaaaacgaa ggtaatgaag
    22561 ccgtatacaa tcaagccaat cgtcttttag cgcaaattga actcaatcaa ctcatgtctt
    22621 tagctaatga ttctatcaat acctatctgc cctttttttg ggaggattta gatgattcta
    22681 agatcatgtt taggcgtgga aaaaaggata aattttttgc tcaaatcaaa cttgaatttg
    22741 ccaagcttgg cgatttggaa attcttatct ctttaaacaa tgataaatac atagatatta
    22801 atatcatggc agaaaatgtt gaatttagaa aaaccatcta tgaaaatgct cacgaactta
    22861 aaagaaatat caataaagcg ggacttttaa gtgcaaattt ctttgtagga gatatcataa
    22921 gaagcaaatt tgatacaaga aatgccaaaa atttagatct tgaaatgggt atggataaaa
    22981 aagtatgagc aagataaaaa aatcaatcaa aaaagctgtc gctctaggct atcaaaaaga
    23041 aaaaaattca gcacctaaag ttcttgctag cggcaaagga gaaagtgctg ctaaaattat
    23101 ctctttagct aaagaacacg gagttcctat caaagaagat gaagatttga tagaaatttt
    23161 aagtaaatta gacttaggag atgaaattcc gcccaatatg tataaagctg tggctgaagt
    23221 ttttgctttt atttatcaaa tggcaaataa aacacctaaa aattaatctg ctattttttc
    23281 tccaaattta acattctgcc ctgctttaag cttgatatct aaaagtcctt tttgagcaat
    23341 taaaactatg gtagaaccta attcaaaatt tcccaattct tcaccttttt taagctctag
    23401 attttcatat tttctagtaa aattatgaga aaattttgca ttagtttgta tgcttgtatc
    23461 aaatttaaaa cgcatttttc ctacattttg agctcctaca aacacaagcc aaaaaatacc
    23521 cttttcattt tgacatttta aactcactct ttcatttttt acatataaat tactaatacg
    23581 ctctaaatgc ttttcattta cactataaag ggcgccactt gtgtaagttg cacttaaaat
    23641 ttgcatattg caaggactat gatagcggtg ataatctctt ggagaaagat agatattaac
    23701 ataatcaagc ccattttcca attcttcttt tttaaaacta tcctttaaaa gctcttctat
    23761 gctataagta tgccctttaa tcgaaaaagc aaagagtgca ttatctgcta aaaaagcact
    23821 tccgcactct aaaattttcc catcacttgg acttataaaa ccctcattta tctctcttgg
    23881 aatttgcaaa gatcttgtaa aaagtgcatt taagctttca tattcacaag gagctttaaa
    23941 ttcgctcata tcgatcttaa aataattgac atatttttca ttgattattt tttgtataaa
    24001 actaggaaat tcaacccctg ctataagtcc aaaaattctt gaactctcat tagaaaaact
    24061 catttttcac ctttcaaatt taaaattaca atttcattgg gagcaaaaac tcttaaacta
    24121 ggcccccaaa aacctgcccc actgctaaca aaaagtttgg tattttctcc taaatcataa
    24181 agcccacgta taaaaccttg atgaagcttt actaaaaaca taaaagggaa aatttgtccc
    24241 ccatgcgtat gaccacttaa aataagatca aaatcactta aattatagag caaggctgtt
    24301 ttaggctgat gagcaagcaa aatactagct ttacttgtgt ttaaatctac cttaaccctt
    24361 gctaaatcag gagcgtacaa acccttacta agccctgcta aatctccaag tcctgcgata
    24421 tttataaaac ctaggtctaa attttggtta agtaaaattt tcatattggt gtattcttta
    24481 agtaaattta aaacttcatc tactccatga taatactcat gattacccaa agcataaaaa
    24541 gttccatagg tggattttaa atcattaagc cttgaaatat aattttgcaa ttctttagga
    24601 tttgtatcta ctaaatcccc cactataacc accatatcag gcttttgcaa atttacttca
    24661 acgatgagcc tatccaaaaa atccttatgc aaatttttac ccaaatgtat atctgtaagc
    24721 atagctattt ttaagtcgcg atcaagtttg gcaagataga tatccgtact ttgaatttca
    24781 ggcactctta tagcgttatt tatacttata taaatcaata ctactgctaa gcttatgata
    24841 gttaaatcaa aaaccgagcg cagggcaaga ctatattttt tatgcatctt acccattaac
    24901 attaaaataa gccttataaa atcaagcccc aaagttataa aaaataaaca ataagtcggt
    24961 gcatacaatg cagccaaaaa ttcgtaccaa gtatcgctta ggtattcatt tctgcgaaag
    25021 attaaaaata tcgcttgagc tagaaaaagc agagtaaaaa caaaggcaaa aattttataa
    25081 agatacttaa agataaaaat tttcttaatc aatcttttat aaatataaat atttgccaaa
    25141 ccaaaaatca ataacgtaac gaaagaaaaa ataaaaaata tcataatcct aattatagca
    25201 aagcaaaatt aaatatccat ataaattttt ctgttataat aagcttttaa taaaatcaaa
    25261 ggttatcaaa tgtatcgttt tgcaccttct ccaacaggcg atatgcatat aggaaattta
    25321 cgcgcggctt tatttaatta tatatgtgcc agacaaaaaa atatggattt cattttgcgt
    25381 atcgaagaca ccgataaggc tagaaatata acaggaaaag aagaagagat taaagaaatt
    25441 ttgcatcttt ttggcatttc atggcagcat tattatgtac aaagtgaaaa tttaaaattt
    25501 catcgtcaaa tggctttaaa gcttgtaagt gaaaaaaaag cttttgcttg tttttgcacc
    25561 gaagaagagc ttgaagcaaa aaaagaactc gccaaaaagc aaggcaaggc ctatcgctac
    25621 gatggcactt gtcagaattt agcagatatt gatgttttaa aatgtgaaaa accctttgta
    25681 attcgcctta aaaaacctac tcacactatg aaatttacag attttatcaa aggggagtta
    25741 agttttgagc ctgaaaatat cgattctttt gtgattatgc gaacagataa aacccctact
    25801 tacaattttg cttgtgcggt agatgatatg cttgaaaatg taagttgcat catacgcggt
    25861 gaagatcatg tttcaaatac cccaaaacaa gaacatattc gtgcaagttt aggttatgat
    25921 aaagctatga cttatgcaca tttacctatt atcttaaatg aagagggtgt aaaaatgagc
    25981 aaaagagagg ctcattcttc agtaaaatgg ttacttgaga gtggaatttt acctagtgcg
    26041 atcgcaaatt atcttatcat gctaggcaat aaaactcctt gtgaaatttt taccttagaa
    26101 gaagcgattg agtggtttga tattagcaaa atttctaaag ctccagcgag atttgatctt
    26161 aaaaaacttt tgcaaatcaa tcgcgaacat ataaaaatga tggcagataa tgaactcaat
    26221 actgctttaa atttaaataa agatctagca caacttgcca aattttatac ccaagaagca
    26281 agcaccatca aagaaatcaa agaaaaacta gaagctatct ttggcgctaa agattttaac
    26341 gaatttgaac cagaatgtaa aattttaaaa gatcttttaa gtcaaatcga accttttgag
    26401 agttatgaag agtttaaaag ctatctctta gaaaaaagtc aactaaaggg taaaaaattt
    26461 tttatgcctc taagaattat cctaactgga aatactcatg gccctgaatt aagtgatctt
    26521 tacccttata taaaaaatta tattaacgaa ttagcaagga tataaataat ggttgtagat
    26581 tctttgatta tttctatttt tcaagtgatt caaattatta tcaatattta cacttggatt
    26641 atcatcatca cagcactttt aagttgggta aatcctgatc cttacaatcc tatcgttcaa
    26701 attttataca agctaagcta ccctgcttat gctttagtga gaaaaattcc aacacgcata
    26761 ggaagcatag atcttgcgcc tttgattatc gttttagcct tacaatttct tagtattttt
    26821 cttggaaata tcctaaggag cttattgtga gaaaaatact tatcttactt agcttaagct
    26881 tagtattttt aaatgctagc ccctataatt tagaaagatt aaaacaagag gaaaattcca
    26941 tagctaaaga ttattatatc tatcgtcttt tagaaaaaaa aacaataagt aaaaaagagg
    27001 ctgaaggctt aaattctcat atcttccgct atgtaggtaa aatcaaatcc gaacttgaaa
    27061 aaataattcc tgtaaaaatt ttcatcgatc ctaaatacgc tccatgctac aactacacga
    27121 aggttaatat actcgatgca aatcaaactt gccaaagtgt aagattaaac tcaatagcct
    27181 ttatagcaag ccttgataat gctagccgaa gtgccttagc tcaaaaactt agtcatcaaa
    27241 gaggcgattt ggctaattta cttttagctt ttaacactcc cgaacctata gcttatatca
    27301 ttcaaaaaga agatgttaat ggttttttta gacttcgtaa ttattctaaa aaatatgatt
    27361 ttgatttaaa tgctagtttt gccaataagc tacccactca tgtagggttt aagaattttg
    27421 cacaaaatat tatcataaaa aaagaaaatc ccaaatttag ggcttcaatg ctaaaaatag
    27481 atccaacatt tgtaaatgag gattctgctt tttatttagg cattaatgcc ttagcctata
    27541 ataaagagga actggcttac aatttctttg ccaaagcagc acaaactttt aaaatgcaaa
    27601 gcaacaaaga caatgctata ttttggatgt ggatgattaa aaaagatgat aaagatttgc
    27661 aaactttagc caaaagctct tctttaaata tctatagtct ttacgctaaa gaattaacaa
    27721 attctgaatt tcttaaaatt gaagtcatag attctacaaa taagaaaaaa aacaatttca
    27781 atatgcaaga tccttttgca tggcaaaaac tcaacaaaca aattcgcgaa gctaatgcaa
    27841 gcgaacttga tagattggct aaagaatttg actcaaaaga aactctgcct atctatgctt
    27901 atatcttaga aagaaaatca aaatttaaaa accattattt tataatgcct tattatgaat
    27961 acattaaaaa ttatagcgcc ccaagacaag cgcttatctt agccattgct agacaagaaa
    28021 gtcgttttat ccctactgcg atatcggttt cttatgcttt aggtatgatg caatttatgc
    28081 catttttagc caatcatatc ggcgagaaag aattaaaaat tccaaatttt gatcaagatt
    28141 ttatgtttga gccaaaaaat gcctattatt ttggaaatca tcatttaaat tatttagaaa
    28201 aacatttaaa atctcctctt tttattgctt atgcttataa tggaggcata ggctttacca
    28261 atcgtatgct tgcaagagat gatatgttta aacaaggcaa attcgaacct ttcttatcta
    28321 tggaatttgt cccttatcaa gaaagtcgaa tttatggaaa aaaagtattg gctaattata
    28381 ttgtgtatcg acgtcttctg aacgatagta taaagatttc ggatattttt gaaaatttaa
    28441 ctcaaaacaa ggcaggtgat ttaaacaaat cttagcgata attttgtctt ctttttttac
    28501 gcttggaaga gttattttta gataacgggt ataacgattt tgtatcaagt atttaaaaaa
    28561 ctcttcatca agttcttcta tattagcctt tctttcattg ataaaaattt ctaaattttc
    28621 tatcttcaaa gtatcaggag tgatagtcaa agcaaaaata tcctcctcgc tagctttatc
    28681 taaaatagga tttaaataag acagggtaat tatagcattc attttatctt gagtaatttt
    28741 atatttttga gcaaacatta aagtttgagt tttcaaattc gcatccacaa ccgcttcttc
    28801 ctttaaagaa caagcaccaa aaattaacgc tgcaagggct aaggtataaa tcttcatatt
    28861 tttcctaatt tttttctata ttttaacctt ttaactctat tttttggttt aaaatactat
    28921 aatttacatt ttattttagg aaaatggtaa tgaaaaaatc aatcatagct tttagcggtc
    28981 cctcaaattc aggcaaaaca acactgatca caaaaattgc aaatgaattt ataaaacaaa
    29041 acctaaaagt tttgattatc aaacacgatc ctgcagataa agctcaattt gatgtcaatg
    29101 gcaaggatag ttttaagttt tttcaaagtg gtgctgaagt gatggtttta agtcctactc
    29161 gcacgacttt tttctctcat gaaaaaagag atattttaag cgcgttaaaa atagcgcctg
    29221 attttgattt atgtttggtt gaaggattaa aaaccttaga tttaccacgc ataagtgttt
    29281 tttataaaga aattgatgaa agttattttg ctttttctaa tgctattgca agctatgaaa
    29341 aaattgattc ttatccgaat ttaacttggc ttgatttaaa tgacgtgcaa agaatttgca
    29401 attatatttt aaaaaatgcg aaaaatttac aaggagaatt ataaaatgca agaacttatt
    29461 tcctacatac aaaaagcagt aattgaaatt tcaaatgctt taaaatttcc cgatacaagc
    29521 tatagtcaaa accaaaactc cacaggcgat actcaactta aatttgatgt tttaagtgat
    29581 gagattatca caaatacttt aagtcagtgc cctagcatta aagctattat cagcgaagaa
    29641 aaagatgaga ttttaaatat caatgaaaat gcgaaattta tcgtcgctta cgatccgctt
    29701 gatggctcaa gtttaatgga tgttaatttt gctataggtt ctatttttgc tatttatgaa
    29761 gaaaaagcaa gtgctaaaaa tttaaaagct gcgctttata gcatgtatgg agctcgcttg
    29821 gaacttgtta tttgcgaaga taagccaaaa ctctaccgtc ttgataaaaa caacgaattt
    29881 gtttttgtaa aagaccttca aatgcaagaa aaaggtaaaa tcaatgctac aggcggtact
    29941 caaaaatttt gggaagaaaa gcatgctaag tttatcaaaa aattattcga tgagggttat
    30001 cgcctaagat attcaggagc tatggtaagt gatatcaatc aaattttgct caaaggtggt
    30061 ggacttttta gctatccagc aactagtgat gcgcctaagg gtaaattgcg cgcttttttt
    30121 gaagtatttc ctttagcttt tattatagaa aaagcaggag gtaaaaccac aaatggaaaa
    30181 aatcattcct tgttagaact tgattttgat gaaattcacg caaccacacc ttgctttttt
    30241 ggctcaaaat atgaaatttc agagctttta aaggcttata atgagtgaaa taagagatga
    30301 gtttgagcaa gacttagata aaaaaaaaga aattttaagc tcttgccaaa gctcaaaagg
    30361 cttaaagtct tgctataatt gcgatgaaat ttttaattgc tctacaagaa aagattatgt
    30421 agatgcagtt tacaatagta tgtctaaggg taaaaccgaa ggcggatttg atttttaaag
    30481 gaataaaatg cgttatctta caactccaat ttattatgta aatgatgtgc ctcacttagg
    30541 acatgcttat accactatca ttgcggacac tttagctaga ttttatcgtt tgcaagggca
    30601 tgagactaga ttgttaacag gtactgatga acacggacaa aaaatagaac aagcagcaaa
    30661 aataagaaac tcaaccccaa aagaatacgc tgataaaatc agttctgaat ttaaaaaact
    30721 ttgggatgag tttgaaatca cttatgatat atatgcaaga acaaccgata ctaggcatgt
    30781 tgaatttgtt aaagctatgt ttttaaaaat gtggcaaaaa ggagatattt ataaggatga
    30841 atatgaggga cattattgta tttcatgtga aagttttttt gcaaaaagtc aacttataaa
    30901 cgaatgtgga tgtcctgatt gtggcaaaga tacttcttta ttaaaagaag aaagttattt
    30961 ttttaagctt tcaaaatatc aagataagat tcttcaatgg tatgataaag aagatcctat
    31021 cttgcctaaa aataaaaaaa atgaattgat taattttgtc caaagtggac ttaaagatct
    31081 ttctatcact cgaacaagct ttgattgggg tattgaaatc ccagaagaaa ttaaagacga
    31141 taaacacatt atttatgtat ggcttgatgc gctttttatt tatataagct cgcttgatta
    31201 tcaaagccaa ggagaaaatg ctaaattttg gccagcccac atacacttag taggcaaaga
    31261 catcttgcgt tttcatgcga tttattggcc agccttttta atgagcgtgg atttaccttt
    31321 gcctaaattt atcggcgcac acggttggtg gactaaagag ggtgaaaaaa tgagcaagtc
    31381 taaaggtaat gtcgtaaaac ctaaagaagt ggtagatgct tatggcttag aggcttttag
    31441 atactttctg ctaagagaag ttccttttgg gaatgatggt gattttagcg aaagtgtttt
    31501 gattaataga atcaatacag aactaggcaa tgaatttggc aatttactca accgcatcat
    31561 aggaatgagt ataaaataca atcaaggtaa tatttctcaa gaaggcgttt tagaatttta
    31621 taaaaacgaa cttgatacgg ctaaagagca cttagataac gctataaact ttttagaaaa
    31681 cctacaatgt aatcgctatc tagaagagct ttttaaagcc ttaagtgttg caaatttagc
    31741 cattagcaaa tacgaacctt ggaatttaat caaagcaaat aaaatcaaag aagccaatgc
    31801 tcttatagga ctttgtgcaa atatcttagc taaaacaagt cttttattaa gccctacttt
    31861 gccaaaatct tgtcaaaaag taggtttggc tttaaatttt gaaatttctc ctacaaacta
    31921 tcaaaaactt atcttacaaa atgaactttt agattttaag gctagcgcct gtgaagcttt
    31981 atttccaaaa atagaaaaac ctctcttatc tcaagaagaa aaacaagaag tcaaaaaaga
    32041 agaaaagcct aaaatcaaaa tcgatgattt tgcaaaaata gagattaagg tagccaaggt
    32101 gattgattgt caaaatatag aaggcagtga aaaactttta aaatttaaac tcgaacttga
    32161 caataaagaa attcgtcaag tgctttcagg tattgctaag tattataaag caagcgattt
    32221 gataggaaag caagtttgtg ttataagcaa tcttaaaaaa gctaagattt ttggacatga
    32281 aagcgatggt atgatacttt ctgcaaaaag cggagataaa cttgtgctca taagccctga
    32341 acaacttgta gaaaacggct ctttagtagg ctaggatgaa tattagcaat ctaagcgaac
    32401 tcattcatgc aaatatgctt aatgaaggca gtgttttaag cgttacaggc tttgcattaa
    32461 gtcttcatga gcttaaaaat ggcttcgctt tttttagcaa taataaaaaa gagataatcc
    32521 aagcagtgca aaaaggcgca tttgctatta tttcagagca tgagctttgt attgatgata
    32581 aagaaattta ttatcttcag gtggataatc tagaatcagc cttaattaaa ctcttgcgtt
    32641 ttttatgcga agaaaaagag tgtgaattta tagcacttca agcttatgag ctaggaattt
    32701 gcaaagcatt ttctttaaac attttaaaag gaaatatatt tgtagatttt aactcactta
    32761 tcaaggctaa aaagggtgaa attttttgtt ttagcgatga gaattactta cttcaacttt
    32821 gcgcatcttt aacaatccta aaagaagcaa attttaccct actttctcgc tctagctttt
    32881 tttttacgac tctagtttgt gataatttgt attttaaaaa cttaaatctt ccctttattt
    32941 atgccaaaat ttttgcaaaa attatgtttt atcttaaaga aaaaaataca aaaatgagtt
    33001 ttgattttaa taagatagat gattttaaaa tttatttcat ggatgaaaat tttaatattt
    33061 ctgaatttgg ctcaagtgca agagcattta tcatcgtaag caatcaaaat acctttgatt
    33121 tttggcaaga aaattttaaa aatataaagg gttttaaaac cgctttgcat aattcattat
    33181 tctgcgattt ttcatacgac aaacttttag atcttaaaaa cttaaaaaat tttaaatact
    33241 gcctgctttt agaagattat gaagcttttg agcgtgaatt taaaaatgaa gaaaatcaat
    33301 ctccaagctt atttttaaac tgacttaaat caaccctctc acattctaac aaaaatcttt
    33361 ttatagcaag accgccatta tatccaccca agccattact agctataacc ctatgacaag
    33421 gaataaaaat aggaattaaa tttttagagt ttgcattacc cactgcgcga aaagctttgg
    33481 ggtggttgat atttatagct atttctttgt aagtaacaag ctttgcataa gggatattta
    33541 tcaattcttt atatactttt tgttcaaaat cacccccttg tatccataaa ggtgtttgaa
    33601 atttttgaag ctttttagca aaataaagtc tgagttcttc tttggcaaat tcaagcaggg
    33661 gacaagtatt ttcaatatcc aaacgatcgc aaaaatcgat ttttgttaag aaatctccat
    33721 tgctatgtag agataagtaa caaaatggta ttttataata aactttaaac atattttatc
    33781 ctttaaatag ttaaaattat actaaaaaat atttaaggag taaaaaatgt cttttatgca
    33841 agattacaat aagcttgttg aagaaagagc agctttgggt atcccacccc ttcctttaaa
    33901 tgcagaacaa actaaagaac tttgtgaact tttaaaaacc caaaatgatg aaaaattggt
    33961 atctttattg caaaatcgtg tcaatccagg cgttgacgat gcagccttga taaaatgtga
    34021 atttctagat ggaattttaa aaaataaatt tcaagctcca gccatagata aaaaactcgc
    34081 tttaaaaatg cttgaaacaa tgctaggtgg ttataatgta aaagttttaa tcgatgcatt
    34141 aaaagatgaa agtatagcta gcgatgcagc agaagtactt aaaaatatca tctttgtaca
    34201 tgataatttc cataccgtag cagaacttag caaaagcaat aatcatgcta aagctgtttt
    34261 ggaaagttgg gcaaatgcag attggtttaa taaaaaagaa aaattacctc aagtgattca
    34321 atgtgtagtt tttaaagtag caggagaaac caatacagat gatttaagcc ctgctggtga
    34381 tgcttttaca agaagcgata tccctttaca tgctaatgct atgctaaaag taagacaaac
    34441 aggttctcta gaaaaaatca aagaactcaa aaaaagtggt cgtgaagtcg tatatgtggg
    34501 cgatgtcgta ggtacaggtt caagtagaaa atctgcgatt aactccatac aatggcattt
    34561 aggaaaagaa attgatggtg tgccaaacaa acacagtggt ggtatagtaa tgggctcaac
    34621 catagctccg attttcttta acacagctca agatagcggt gctttaccta ttatttgcga
    34681 tgtgtccaat ctagaaatgg gagatgagtt tgaaattcac ccttatgaag gaaagattgt
    34741 aaaaaatggt tctgttgttg cagagtttaa actcagccca aataccatct tagatgaagt
    34801 tagagcagga ggaagaattc cacttatcat aggtcgtgga ctttgtgcta aagctagaga
    34861 attcttagga atggaaaatg aaaatatctt tactaagcca gaacaacctg aagcttcaag
    34921 cggtggatat actttagctc aaaaaatgct agggcgtgcc tgtggagttg aaggtgtgcg
    34981 tccaggtatg tatatagagc ctcgcacact tactgtaggt tctcaagata ctacaggtcc
    35041 tatgacaaga gatgagatta aagagcttgc aagcttagga tttaatgcgg attttgtaat
    35101 gcaaagtttt tgtcatactg ctgcttatcc aaaggttagt gactcaaatt tgcacaaaac
    35161 tttacctaat ttcatgacaa gtcgtggtgg agtaagctta aaaccaggcg atggggtaat
    35221 ccactcttgg cttaatcgtt ttgttttacc tgatacagta ggaacaggtg gagattctca
    35281 cactcgtttt cctataggaa tttcatttcc tgcaggaagt ggacttgtag cttttgctgc
    35341 agtaactggc tctatgcctt tgaatgtacc tgaaagtgtt ttggtgcgtt ttagcggaga
    35401 attgcaagct ggagttactt taagagatct tgtaaatgct ataccttatt atgcaatcaa
    35461 acaaggacaa cttactgttg aaaagaaaaa taaaaagaac atttttgcag gaaaaatttt
    35521 agaaatagaa ggcttgccaa acttaaaagt agaacaagct tttgaactca gtgatgcaag
    35581 tgctgaaaga tctgcagctg cttgtagtgt agatttaagc atagaaagtg taagcgaata
    35641 tatcaaatca aatatttcac ttatagaagc aatgatagaa gcaggatatg aagataaagc
    35701 cactcttgct agaagagcgg ataaaatgag agaatggctt aaaaacccta ctcttttaag
    35761 agcagataaa gatgcaaaat atgcgtacat tatcgatatt aatcttaacg atatcaagga
    35821 gccaattcta gcttgtccaa atgaccctga tgatgtggca accttaagcg aaattttagc
    35881 cgatgataag cgtccaaaaa atatcgatga agtttttgta ggctcttgta tgacaaacat
    35941 aggacattat agagctttgg gagaaatttt aaaagataaa ggcatactta aaaccagact
    36001 ttgggtagtg cctccaacaa aaatggataa agcacaactc accaaagaag gttattacag
    36061 catctttggc gcagcaggcg ctagaataga agttccaggt tgttcgctat gtatgggaaa
    36121 tcaagcaaga gtaaatgatg gtgctgttgt cttctcaacc tctacaagaa actttgacaa
    36181 tcgtatgggt atgggtgcta aagtatatct aggaagtgct gaacttgcag cagtttgtgc
    36241 gattttaggt aaaatcccaa gcaaagaaga atatttgcaa atcgtaagcg ataaattaag
    36301 cgatgcgcac aaagcaaata tttataaata tcttaatttt aatgaaattg ataattttaa
    36361 actagataat taatccaaat ttaaagcaga tttgggttaa aattatagat taaaattttc
    36421 aaaggataaa attgagatta ttatttattt tattttgttg ttttttaggt ttaaaggccg
    36481 aaaatttaat tacttgtgat tatataaaaa ataacaaagc ccaagttttt caagatagtc
    36541 caaagcaaga ctatcttgat attgcttcta cttgtgattt ttctttaaaa aatcaagctt
    36601 ttaccaaaag actttatcaa ctcgccaatg aaattcgcgg tggaaatgct gcttgtagtg
    36661 gtattgaata ttttccaaaa ctacaagaat ttgacttttt gcttttaaaa atttctattg
    36721 atcctataga atatcaaaaa ggtctagatg ctcctgaaaa tttagaaaaa aaatacactc
    36781 ttttaagatc ttattttaga tattgggctt atcaaagtat aggaaatttt agactttatc
    36841 aagaattttg gcaagaatac aataatgcca tagaaccctt agaacaatat tttgaaaata
    36901 atttcaaatt cgacaagggt agcaatattt actataccac caatgcttta aatgaatttt
    36961 taaattgggc tgtaggagaa actaaaattt acaaagatat aagtccttta gcaaaagttt
    37021 tatccaataa aaaacattca ataacttata tccaagattt tatttatacc aataatctca
    37081 accgagatga acttaccata gggcttcaag cagccttgtt aaaccaacgc aacaaagata
    37141 ttttaaatct tttgatccgt ttgggtgcta gaatcgatga gggttatgaa aatgctttgt
    37201 tttatgcttt agaaaactac gataatacca aatttttatt agaactaggt ttaaatgtca
    37261 atagtgccaa tacttttggc aagacacctt tattttacgc tatagaattt aagcgcaaag
    37321 atattgtttc attgctttta gaatatggta ctgatgttaa taaaaaatac attaacgata
    37381 atgaaaaatt agccctaagc gcaaatatag gcggaaacac tccttatttt atcacctttt
    37441 gtgctttgga gcacacttct aaaaatgttc ttatgcatgc ggccgcttat ggagatgtag
    37501 aaattttaaa aatgcttgtt gcaaaaggtg ctgatattaa cgaaatagat gatttaggtt
    37561 ttaatgcttt agattttgcc ctagcagcca atcaaaaaga taatgctaat tatctgcaaa
    37621 gtctgggttt aaaacccaat gaaaatttaa tttacggagg gagtttagaa tgaaaactgc
    37681 atttatcaca ggagcaagct ctggttttgg gcatgcttgc gttgaagctt ttatacaaga
    37741 aggatacaaa gtcattgctc tagcaagaag aaaggatcgt ttagatgaat taaaagccaa
    37801 atacaaagat caaattcaca tactttgtct tgatgtaaga aaacaagaag agatctttaa
    37861 agctgttgaa aacctaccta acgattttaa agaaatagat gtacttttta ataatgctgg
    37921 tttagctctt ggcatagatg aatttgataa attaagtata gaagatatag acactatggt
    37981 tgatactaat atcaaaggtc ttttatatgt agcaaaagcg atcattccta tacttcgcaa
    38041 acaaaaaagt gcttatatct tcaatcttgg ctctgtagca gctagaaatc cttattttgg
    38101 tggcaatgta tattgtggaa ctaaagcatt tgtaggacaa ttttctaggg ccttaagaaa
    38161 tgatttaaga ggagaaaata tcaaggttac aaacatagct ccagggcttt gcaaaactga
    38221 atttagtgaa gttcgcttta aaggagataa ggcaaaagcc gatgcagtct atgaagggac
    38281 gcaatacata agtgcacaag atatagcaaa agtagtgatg tcaatcatca atctgccaag
    38341 ccatatcaat gtcaatgaaa tagaattaat gcctgttact caaacttgga atggctttta
    38401 tatagagcaa aatcaatgag atttttagta tttttcctac tgcctttact tgcatttgcc
    38461 aatacacatc aagctacggc aaatgcaaat ttatttggag ttttcactct tatacctcct
    38521 ttggttgcta tcactctagc ttttattaca aaagatgtga tcttgtctct ttttgcagga
    38581 gttttaagcg gaaccttctt gcttagtctt gcttctaata tttttcaagc cgacagctta
    38641 agttttattc atttttataa tactgcgata gattcttttt caaaaattat ttcttatatt
    38701 ttagaatcaa cttcagatcc tgtaaatgct ggtatcatct tgcaaatttt atgcataggt
    38761 gggcttgttg cacttatcac caaaatgggt ggcgcaaaag ctgtggctat aaaatttgca
    38821 aaaagagcaa aatcagcagt atcggcacaa gtaaatactt ggtttttagg tttgttaatc
    38881 ttttttgatg attacgctaa tttactcatc gtaggaccta tcatgcgtcc tttagcagat
    38941 aaatttaaaa tttctcgtga aaaatttgcc tttattatcg attctacagc tgcacccgtt
    39001 gcagggattg ctgtgatttc tacctggata ggtttagaag tatctttaat caaaaatgcc
    39061 tatgaagata taggcattag caatatcagc gcttttgggg tttttgttga aaccataccc
    39121 tatagatttt acaatatttt tatgcttttc tttgttttaa tgactgcgct tatggggcgt
    39181 gaatttggtc ctatgttaaa agctgaaatt cgtgcaagaa ctacaggaca aatcgctcct
    39241 ttatcaaaat caagcaccct agataccgca gaacttgaag atcagttttt agctccaaaa
    39301 gaagatatta aaatccgtgc attagatgct acgattccta ttttaacttt gattgtttta
    39361 gctatacttg gattttattt taatggacta agtactttag aaggtgaaga attactaaaa
    39421 gcaaatgcaa atcctttatc ttttgaaacc cttaggctag cttttggaag tgcaaattct
    39481 tctgtggtgc tttttcaagc cgccttattt gccgctattg tagcaatttt tattggagtg
    39541 tatcgcaaga tttttaattt taaagaagcg gttgaaactt ggatatatgg ttggaaaact
    39601 atgattttta ccatagtttt acttttgttt gcatggtcgc tttcaagcat agtaaaagag
    39661 cttggaactc cagaatttat ctcaagcttg ctcgctgata aattgcctga atttatccta
    39721 cctgctacca tttttgcttt tgcttcgctt atttcttttg cgataggaac aagctatggg
    39781 actatgggta ttttaatgcc tttggcggtg cctttagctt ataaggttgc acaaataaat
    39841 gcaatggata tggatgcaat gcatcattat atggtgatta acataagttg tgtcttaact
    39901 ggagccattt ttggaaacca ttgttcgcct atttcagaca atgtaatcct ttcatcaatg
    39961 agtgcaaaat gtgatcatat ggagcatgtt cgcactcaaa ttccttatgc cttatttatt
    40021 tgtgtaattt ctttatttgc tggttatata cctgtttctt tagggcttag tgtatggttg
    40081 gttcttccct taaatttaat tcttattgca tttttgctta gaattatcgg aaagaaagtt
    40141 tcatgagtct tcaagaattt ggaaattttt taaaattaga agaaaaagct tcttttataa
    40201 aagaattttt caaagatttt tatcaaggaa atttcgagct tttttcttcc aaagataaac
    40261 attaccgcac aagagcagag ctttcatttt atcatgataa agacgaaatt tattatgcga
    40321 tgtttgaaaa taaaaagaaa atcatcatag aaagcttaga atttgcagat gaaaaaatca
    40381 ccgcttttat gcccaaactc ttaaaacaaa ttcgcaacaa tacaaattta aaagaaaaac
    40441 tttttggtgt agagttttta gcgactaaaa acgagttaag caccactcta ctttatcata
    40501 aaaatataga gcttatttac aatgacttaa ataatttaag cttagaactt gatgcaaatt
    40561 taatcgcaag aagcaaaggt aaaaaacttg tttttaaaaa agaaaattta agacaagagc
    40621 ttgatataca aggtagaaaa atattttatg aatttaacaa tgattgtttc atacagccta
    40681 atacctccat caatgaaaaa atgataactt gggtgtgtga aaatttaaaa acccaagaaa
    40741 gaaaagactt gcttgagctt tattgtggat atggaaattt tactctagct ttagcaattt
    40801 tttttaacaa tgtactagcc actgaaattt caaaaagcaa tattaatttt gccttgctta
    40861 attgcaagat caacaatatc tcaaatatcc attttacaag actttcaagc gaggaattat
    40921 cccaagcttt aaaaaaagaa agggaatttt ttcgcttaaa agatattgat ttagataatt
    40981 ttaatttttc tcatatttta gtcgatccac cgcgtgcagg acttgataaa agtgtgattg
    41041 atttaattaa aaattatgaa aacatcattt atatttcttg taatcctatc agcttgaaag
    41101 aaaatttaaa agaacttgct cttacgcata aagttgaaaa atttgcgctt tttgatcagt
    41161 ttgttaatac tccgcattta gaatgtggaa tacttttaaa atctttacat tctaagcaat
    41221 cttcaatttg aaagttgata aattataaaa aataataatt catcaactta gctaaaacca
    41281 caataaaaat acaaagcata aaaacaaaag gatgtataaa acgcgttaaa ggattttttc
    41341 tctttagcac aaaatgaaaa aataaagaaa acaccactaa agacaaaata ctaaaggcta
    41401 aaatcaattt tatcaaaaaa attaaattta aaggattaag atgaaagctt atcatcgcac
    41461 caccacttaa aaatagcaat aatacgataa aaggcataat cttaacaccc acggaagaaa
    41521 aaagattttt atcaaaattt ggattttttc tcttaattgt attgagtata aaaatatcga
    41581 caaataaata acctataaaa aagattgcac agcttagatg aatgattaaa atataaggat
    41641 aagcttgaac c
//
LOCUS       DBBXOW010000006        41636 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.006, whole genome shotgun sequence.
ACCESSION   DBBXOW010000006 DBBXOW010000000
VERSION     DBBXOW010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 41636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41636
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.006"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            18..1334
                     /locus_tag="ACJE1S_000324"
     CDS             18..1334
                     /locus_tag="ACJE1S_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HGG0805897.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVLIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMFI
                     GFLMDIVVICGNYYVLHYTKSELFGIGLSNIFARIVAIVALLVILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLIGARYENIAYKHAWRALYFSVIASALVALLNYLFQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKVLV"
     gene            1310..1957
                     /locus_tag="ACJE1S_000325"
     CDS             1310..1957
                     /locus_tag="ACJE1S_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HGG0805898.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKKRFEKKALKDDELIFLAKKYKIIFDENVKKTYFDKD
                     KILCQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLKAIEYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS"
     gene            1999..3519
                     /locus_tag="ACJE1S_000326"
     CDS             1999..3519
                     /locus_tag="ACJE1S_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805899.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYILSKEENTYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGQGFSPCIPEDKEFSKFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRFNAMFRKNHNL
                     DFSDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRCKEKAFILELSKDDEDILLINKELNLLKLSL
                     PKHSKELYEEIQKDEIGARLLENFAKEFPLLNESFELKDNFYSLLCLVGRVLNLDENL
                     HKAGEKLLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSTMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDDLREKKQSEMALISGSLFEHKALLRNTLKHLKNCQLSDVPLRI"
     gene            3500..5689
                     /gene="hypF"
                     /locus_tag="ACJE1S_000327"
     CDS             3500..5689
                     /gene="hypF"
                     /locus_tag="ACJE1S_000327"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016743 - carboxyl- or
                     carbamoyltransferase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HGG0805900.1"
                     /translation="MCHLGYKLQISGLVQGVGFRPLVFELASELGLHGEVKNDGFGVE
                     IILACTKEECENFIYKLKEKLPPLARIDSIDITEQTTTNYTHFSIGTSLQSAKTTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKNLPYDRCNTTMEALKMCEF
                     CKSEYEDPKNRRFHAQPISCPQCKIDVFLKNKKGEILAQDDEAFKTCAKLLKQGKILA
                     IKGMGGFHLMCDAFNLEAIKELRLRKNRPKKPFALMCRDVSDAKELCFVDEEEEKLLG
                     SILAPIVILKAKKAFSLIAPDVDKLGIMLAYTPLHLLLFRYFDGVLVATSANLSGESI
                     IKDEDNLLKKLGNVFDFYLDYAREIHNPSDDSIAQVINGKTMFLRTSRGLNPTYLEIK
                     SDKKGVFLALGSELKNEFVIFYENKLLISPYIGDLKSIDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKDF
                     LAKIPKIKLENLKKIHTHSTLQTSSLGRIIDAFGSIVFNMEKISYEAQIGLMCEAFYD
                     ENLDFSYELFSKDGEINFKELIEGALKDEKSKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFIPLKYPCNDSSIALGQMVHFLNLEK"
     gene            5767..6510
                     /gene="hypB"
                     /locus_tag="ACJE1S_000328"
     CDS             5767..6510
                     /gene="hypB"
                     /locus_tag="ACJE1S_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0051604 - protein maturation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HGG0805901.1"
                     /translation="MCKDCGCSINSSHTHGHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     ALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDIKEATRLIKELNP
                     RADIITLDAKNGTNMELWYKVLKLKKELF"
     gene            6510..6791
                     /locus_tag="ACJE1S_000329"
     CDS             6510..6791
                     /locus_tag="ACJE1S_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HGG0805902.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFYR"
     gene            6775..7866
                     /gene="hypD"
                     /locus_tag="ACJE1S_000330"
     CDS             6775..7866
                     /gene="hypD"
                     /locus_tag="ACJE1S_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HGG0805903.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCTVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNV"
     gene            7863..8837
                     /gene="hypE"
                     /locus_tag="ACJE1S_000331"
     CDS             7863..8837
                     /gene="hypE"
                     /locus_tag="ACJE1S_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HGG0805904.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     IVKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAFELANEGTFILCVEKEDELKAL
                     EILKKYNVNASIIGEVLEEKKARVILENAYGAKRFLEAPKGELLPRIC"
     gene            8837..9181
                     /gene="hypA"
                     /locus_tag="ACJE1S_000332"
     CDS             8837..9181
                     /gene="hypA"
                     /locus_tag="ACJE1S_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008901 - ferredoxin hydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HGG0805905.1"
                     /translation="MHELSIVESLIELCEENAFAHKAKSVQEIYVKIGRLSGIEVELF
                     RRCFETFRENSELCKNAKLFIELTPLEILCLKCDQTSVLEENVFKCPKCESIEYKISQ
                     GEDLHLMRLVME"
     gene            complement(9289..10254)
                     /locus_tag="ACJE1S_000333"
     CDS             complement(9289..10254)
                     /locus_tag="ACJE1S_000333"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HGG0805906.1"
                     /translation="MYRKELQNLLSKNQIDNFFFLYGADNFQSELYADFIKEKYQADE
                     ILKLFFEEYSFTRASDFLSGGSLFSEKKLLEIKTSKKIPTKELKVLVELCKNNKDNFL
                     LLELYDESSKQSDIEKIFSPNFVRFFKANNAREGIKLLSIKAKQLHIEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNIGSFESFFEKILKRADFKNELEK
                     ILDNFNEIALINSLSSAFYRLFKIALYAKIYGKVDFKELLGYTPPPQVAQNLNEQAFS
                     LKIKHYKEIFNLLLKSEYELKTNSKLAKKEFLIATLLKLARIIKS"
     gene            complement(10247..12181)
                     /locus_tag="ACJE1S_000334"
     CDS             complement(10247..12181)
                     /locus_tag="ACJE1S_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HGG0805907.1"
                     /translation="MKEFLNNLNYGISAHEVSNEFKQILRELLANNIIKEHKNRYYLN
                     NGYVFGTLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAAKLLPLKKKRPS
                     AKVVLVLKRANETSLVITKRYGEAVLGMNIKTGLSTALKASQKSLKALPLGTILKIEN
                     QDNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRLDL
                     RTLPFCTIDPIHAKDFDDAIYFDTEKRELYVAIADVSEYVYAYSAIDKEARSRGFSIY
                     FPHIAIPMLPRPLSENICSLKPHLDRLAYCFKITLDLDCKVVKEELFETIINSKRRFN
                     YDEVDEILIQKPDLKELSWLYKLFEITKTLRKNRLKNAFEFRTEELRMNLDENLSLKS
                     TIFEKDTPSHNLIEDCMLLANKAAAKLIDVGVFRNHSSADMKKIDRLLNELLELGIDV
                     KLKPNLPELIRDIQALADELGLRAEVDKLIIKAQKKAEYSSENGGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKKDEKLFNYLLLNIQSTCENLSVLEREADKVAYDFMDRK
                     FARWAAKNIGKKFKALVVQNDGICIAKLDDEIKGADIILYDTRVNLLESVEVQILEAD
                     IIMAKIYAKITQRLRKESNV"
     gene            12304..13326
                     /gene="ilvC"
                     /locus_tag="ACJE1S_000335"
     CDS             12304..13326
                     /gene="ilvC"
                     /locus_tag="ACJE1S_000335"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HGG0805908.1"
                     /translation="MAVTVYYDKDCDLSLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     VIGLREDGASFSKAKSAGFEVMSVSEASKVADVIMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEIKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQDGNFAKDFILERRAGFARMHAERKNMNNSLIEQTGRNLRAMMPWISAKKL
                     IDKDKN"
     gene            13329..14360
                     /locus_tag="ACJE1S_000336"
     CDS             13329..14360
                     /locus_tag="ACJE1S_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HGG0805909.1"
                     /translation="MSKKLIQIKRYLIIAILFLICVILFLGILIQYQDSQNALKFAQN
                     SSKNITIEPKQENISNENHLGIFKEIPYKDENDNFQENNQSILEEQIKDLNLSSIIDE
                     NLSLVVEQNLSKEENLTKDMNLSKTKQARLAIIIDDMANISQVRALQALKLKLIPSFF
                     PPDKNHIDTPKLALKFDFYMVHLPLAAMNYTKPELDTLNPSDSEKRIFKKIQQVKKDF
                     KDLKFINNHTGSLFTSDEKAMKKLYKAFEKEELIFVDSKTIASSKAPKVAKALGQIYI
                     QRDVFLDNRDDVAYIKNQLIEAVRLAKQKGFAIAIGHPRKNTFKALEQSKDLLKSVEL
                     VYLSEIYAK"
     gene            14350..15120
                     /locus_tag="ACJE1S_000337"
     CDS             14350..15120
                     /locus_tag="ACJE1S_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990814 - DNA/DNA annealing activity
                     [Evidence IEA];
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HGG0805910.1"
                     /translation="MQSELPSAYLELFKELKNPPKKLYYKGNLKLLEQRKIAIIGSRR
                     MSTYTKNCVFELSNLLKNSKISVVSGGALGVDISASMAAMPSTIGVFANGLDEIYPRS
                     NEKIIKQIYENALALSENESYYKPKPYDFLLRNRLIVSLSEAVVVAQADLQSGSMQSA
                     RLALELNKPLYVLPQRKNESDGTNLLLQEKNANLLLDFKEFASCFGVIEEEKDEFLDF
                     CRQGVSVDEATQIYGEKVYEYELEGKISIEGLFIRVLV"
     gene            15117..15497
                     /gene="ruvX"
                     /locus_tag="ACJE1S_000338"
     CDS             15117..15497
                     /gene="ruvX"
                     /locus_tag="ACJE1S_000338"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HGG0805911.1"
                     /translation="MRALALDVGLKRIGVALCIDKIAIPLEGIIRKNRNQAANEVKNL
                     LQIHDISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEIRFVDESGTSKEALGYGVA
                     NTRKKDAKLDSLAALIMIKDYFGI"
     gene            15487..16362
                     /locus_tag="ACJE1S_000339"
     CDS             15487..16362
                     /locus_tag="ACJE1S_000339"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HGG0805912.1"
                     /translation="MEYNLAGIYNDKELENLKNSFKLPKKICCFINRLKCDNLTLERE
                     FQDLNLEYEKLNEYCYLFKACDKSILSSMQAFNEFKFYIQNYASYLCALNLDVKAGQS
                     VLDMCAAPGGKSINLANFMQNEGYLACNEASKDRFFTLQKNLKNYGVKARVFMKDGKN
                     IGNLCPLKFDKILLDAPCSTLAKMGLELEKSSKEIKNIAKLQKKLLHSALKALKVGGE
                     LVYSTCTFTKEENEEVIENALKSDFDIELLDINLENALVKNGQSSEFEAISKCKRILP
                     CEEYDGFFIAKLRKN"
     gene            complement(16585..17085)
                     /gene="msrA"
                     /locus_tag="ACJE1S_000340"
     CDS             complement(16585..17085)
                     /gene="msrA"
                     /locus_tag="ACJE1S_000340"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HGG0805913.1"
                     /translation="MKNIILGGGCFWCVEAAFENFEGIIHTEVGYTGGNDNPSYESVC
                     NGDGNIEVVKIIYNEAKISLEQILSLFFKIHDPTSFDKQGADIGIQYRSAIFYENQSD
                     KNTIEDFIKKEQVNFLLPIVTQIYKLQKYYKAEDYHQHYFIHNPNQSYCRFVIAPKLE
                     KIRNYE"
     gene            complement(17133..17651)
                     /gene="ppa"
                     /locus_tag="ACJE1S_000341"
     CDS             complement(17133..17651)
                     /gene="ppa"
                     /locus_tag="ACJE1S_000341"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HGG0805914.1"
                     /translation="MDLSKIKIGDIPNKINAVIEIPYGSSIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     VEILEKAIKNYK"
     gene            complement(17661..18236)
                     /locus_tag="ACJE1S_000342"
     CDS             complement(17661..18236)
                     /locus_tag="ACJE1S_000342"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HGG0805915.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADADVTHYSTGDLLRAEVAS
                     GSELGKTIDGFISKGNLVPLDVVVNTIVSALKAAPTKTVIIDGYPRSVEQMVEFDKVL
                     SEQNEICLKGVIEVRVSEQVAKDRVLGRSRGADDNEEVFYNRMKVYTEPLEEIISFYQ
                     KKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            complement(18233..19984)
                     /gene="aspS"
                     /locus_tag="ACJE1S_000343"
     CDS             complement(18233..19984)
                     /gene="aspS"
                     /locus_tag="ACJE1S_000343"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HGG0805916.1"
                     /translation="MRSHYNTDLNSTHIGEVVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASRTRNEFVLIAEGKIRPRGEGLTNPKLKTGEIEVVVSKLII
                     ENESAVPPFGIGDESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVIATAETFLKDIFKACGKEIQIPFRQMPYKE
                     AMENYGSDKPDLRFDLKLIDVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKEDGLKGPLCKFFNEEDLNELIKRCELEVGDVVF
                     FGAGVKKTVLDYMGRFRIFLAGELNLINPDALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNINEADLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSAA
                     SNEAMRELGIKLRENIK"
     gene            20077..20937
                     /locus_tag="ACJE1S_000344"
     CDS             20077..20937
                     /locus_tag="ACJE1S_000344"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HGG0805917.1"
                     /translation="MQNKIDYKNIKKIGLAARPNSNLDKEILILKEILEKKGVELLLY
                     KESSEIVKLPKYDLDTLFELSDFVISLGGDGTLISLCRKACEYNKAVLGIHAGHLGFL
                     TDFKVDEAEVFFEAFFRGEFRVENPFLLSIILESNDGQIMQKFAFNDVVISKDRKASM
                     AHIEVFRKAKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFDLEIGAKDCIFSIDGQENYKMNDFKSVKVGLSDKSVALIHPKNRDYFQ
                     ILREKLNWGH"
     gene            20937..22460
                     /locus_tag="ACJE1S_000345"
     CDS             20937..22460
                     /locus_tag="ACJE1S_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0805918.1"
                     /translation="MINRVLMKENLGFKEVELEISQGLTVFTGLSGAGKSVLFKGILS
                     AFALSESEAKLVEIELDDKIDLEEYGIEGEEENVFKLLKDKNTKYFINNQSISKKSLI
                     HLSKKFIKYLSAKEINEFSNEKFLNLLDALECAKNPEFEDFLSHFKDDYKQWLQISEE
                     LTTILEEEKRIEELKELASTQIERISKINPKVGEYEELLNLKKKLSKKDKIEAAWEKA
                     SAIFELEKVVIDALNLSEKDTSFFSECLNELRIIAENEKIEDLDFDIEEVLNRIEDLS
                     SLIKRYESIENALEVLENKKNELAHYDNLSFEKKELEKKLEKIEKKINQSTQLLTQAR
                     MQNLKTLEDFLNDYLKNLYMKNVSLELVDTSKITSLGKDEIKLSINAANLKNLSSGEL
                     NRLRLAFIATECRILNSGTGIIFLDEIDANLSGKEAMSIANVLNELSAFYQIFAISHL
                     PQLSSKAHNHFLVEKNASCSTVKKLKDKERIKELARMISGETITDEALEFAKTLFKA"
     gene            22549..23793
                     /locus_tag="ACJE1S_000346"
     CDS             22549..23793
                     /locus_tag="ACJE1S_000346"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HGG0805919.1"
                     /translation="MNKKILLIDDNKMLGKLLAKKIQTTLNHEVDIVFSLAEVKALPN
                     DEYFLTFADLCLPDAPNGEVVDYVLAKNWPVIVLTASNDKATRDKFMDKDILDYIFKE
                     SDTCIDQIIDSIVKLERYAKTKVILALSKLPERNEIKKILTQRKFNVLAAAHGEEAMS
                     YLNDNSDVKLIIADANMPVISGSELLSEVRARFSDDELGVIILGDKDDALEASLLVSG
                     ANEYLVKPLSKESLNCRLDKCLHYMANMQFLSIYNNLDPISGIKNSNALLSCVEDYLN
                     EIVSKEEEFAFAFLDIDNLRNLNEEYGYEVGDKIIKICADEIVNETKGRDIVGRYSAE
                     KICIVLKNISQERAIKILSRIRVNIKKVGILVNLDEVFFTASIGVVFAKSGDKFEILV
                     DKASKALSQAKANGKDRVEVCS"
     gene            23784..24596
                     /locus_tag="ACJE1S_000347"
     CDS             23784..24596
                     /locus_tag="ACJE1S_000347"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG0805920.1"
                     /translation="MFLNLEFKDGLKIIDTHCHLDSEVFKEDLDELLKHSFDNGIEKI
                     IIPGADIKDLPYAAELASKYENVFFAAGVHPYELEGFDEKILRAYLQDEKCVAVGECG
                     LDYFRFKSEDLKEREKEKEEQKRLFVAQLELAKEFKKPVIIHSREANNDTYEILHEHS
                     KDLVGGVLHCFNASEHLLRLSDDGFYFGIGGVLTFKNAKNLVNILPQIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQFVANKMSEILDLPRQELLRICLENSYRLFFKG"
     gene            24599..25732
                     /locus_tag="ACJE1S_000348"
     CDS             24599..25732
                     /locus_tag="ACJE1S_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HGG0805921.1"
                     /translation="MKKIIFCFILFYNFLFAQTTTPEFYERQMSVLRNLDIDPSFISD
                     LAFVQSQQDLRSKHAPTLIDGIQNFSKVTPMIRKILAQQEVPEEILYLAMVESGLKAH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAAVHYLKSLKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLRVLIDPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDGALVNYALNNDFAKVDAPSSVALKDLAKNLNMDLATFKKYNPHFKHGFTPPGK
                     GYYMYIPLNKVAFFDKNFKVEKLAKVDTTIPMTKIYVVKSGDSLYKIAKKYNTSVEQI
                     RELNKIAKNHLSINQKLIIPIKENKNANYKTKAKENFTQVVSR"
     gene            25677..26516
                     /locus_tag="ACJE1S_000349"
     CDS             25677..26516
                     /locus_tag="ACJE1S_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HGG0805922.1"
                     /translation="MQTIKQKLKKTLPKLLAASLVATFSSGCFGGLFSSVGSAQIYYP
                     SNDFHSSPSGSGSKGTMKPYTINGKTYYPTVVSVGETADGIASWYGPGFHGKKTSNGE
                     TYNQNGLTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQID
                     MIAAGTAPVRLEVIGFGSANSGNNVVHSNINYGASGGIANNGQIYEGGNFMVQIGAFK
                     NPSGAQTIASRYKTYRTYSSTIRKSSVDGLSRVFLTGFRSEEEARDFAASGAFAGAFV
                     VRE"
     gene            26520..27008
                     /locus_tag="ACJE1S_000350"
     CDS             26520..27008
                     /locus_tag="ACJE1S_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HGG0805923.1"
                     /translation="MIELIFLDVDGCLTDGKIIYTSNGSVIKEFDVKDGAAIEAWIKL
                     GKKIAIITGRNCPCVSARAKDLKIEIVHQGVKDKLTCAKKILEELNLDFSQCAAIGDY
                     FNDKNLLENVGLSFKPKDAHRDLKVDITLDKKGGKAAVAQMIEYIIKKNDMQEEWDKL
                     WL"
     gene            26999..27511
                     /locus_tag="ACJE1S_000351"
     CDS             26999..27511
                     /locus_tag="ACJE1S_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805924.1"
                     /translation="MAIRIFGILIALFTITFTILSLQDPYSLNIKSYALNFKNIEASD
                     LNAYELNASNVKSYYKAQSWARYTDKDEFDNFVNFNLDFNLSANKLELKGKEMDKVLL
                     EGNVTYIGLNNTKIFADKVEYAPKNKILSTNTGFKALINGSIINGNTLNYDVEKKILQ
                     VQGVNAWLER"
     gene            27523..27954
                     /gene="lptA"
                     /locus_tag="ACJE1S_000352"
     CDS             27523..27954
                     /gene="lptA"
                     /locus_tag="ACJE1S_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HGG0805925.1"
                     /translation="MSISISLASQIEVKALNFYSDENKGESILSGNVEIIRGDDILTA
                     EKVIIYTDKNRKPMRYEAVQNANFKIVLKGKTYKGSGDKFIYNVAKDIYEIDGNAFIN
                     ELESNQKLYGDRIIVDKRNNVYRVESKDKKPARFIFDLEQK"
     gene            27951..28541
                     /gene="yihA"
                     /locus_tag="ACJE1S_000353"
     CDS             27951..28541
                     /gene="yihA"
                     /locus_tag="ACJE1S_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HGG0805926.1"
                     /translation="MIISAKFITSLDKFDKNFASHFSEVAFLGRSNVGKSSLINSLCK
                     QKKLAKSSATPGKTQLINIFEVLCKKDEDKFSIHFIDLPGFGYAKVSKNLKEIWNKNL
                     DEFLKLRSSIKLFVHLIDSRHTNLDIDLNLDKYLKSFLKPDQRVLKVFTKCDKLNQSE
                     KAKLKNSFKDAILISNLNKMGLDDLEHEVIKQTLGL"
     gene            28543..29037
                     /locus_tag="ACJE1S_000354"
     CDS             28543..29037
                     /locus_tag="ACJE1S_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805927.1"
                     /translation="MRKTISAYKVKLNGSYVFLGFLCILYQILGSVFLYMPLLYGVFF
                     CYMYFLLEERQKTFNKLDFRWYFSLFFLFFTDITYDFFLFSSWLAFVIFYYTCADWIK
                     TNLKIGKIIPIILVLCVYAFIFILDAIFSYVGDQEFKMPNFGYMISIMFECLFAYMLY
                     RSKF"
     gene            29037..30872
                     /gene="mrdA"
                     /locus_tag="ACJE1S_000355"
     CDS             29037..30872
                     /gene="mrdA"
                     /locus_tag="ACJE1S_000355"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HGG0805928.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FIVPTRGQILDRNGTPLAINDLGFSISIKPYLTLKRANRGVLEKELNQLQGFFPDLNT
                     TKLAEFYKRNDSYYNQDFIKIIDFIPSQEMMKHYSELNLNQNIRIDPAVQRKYPFGKL
                     ASHIIGYVGKADLQDIKENEISKLTNFTGKSGIERYYNDVLQGEKGTKIYKVNALNQE
                     VEQLSYTSALSNDIELTIDIELQSFLTQLFEGNAGAAIIMDISDGSILAAGSFPEYDL
                     NPFVTGISYKEWDELSNNLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKSINPSTQF
                     FCNGSIELGGRFFRCWNRAGHGAVDLKHAIKASCDVYFYDGSLQVGIDQISRTLSRIG
                     FGAKTGVDLPNEFVGILPSREWKMQRYKQAWFQGDTLNTSIGQGNFLATPMQIARYTA
                     QIAKGAEVVPHFLKSVENNNTITEDKAQDSNEIFTLFEKSQLPYIRDAMYAVANEQGG
                     TSYHYLRNLEVKVAAKTGTAQVVGFSQADKNRVDEKQLRYYTRSHAWVTSYAPYSKPR
                     YVVTVLVEHGGRTISSGVATAKIYQKMIELGYFKPENKANSPKKN"
     gene            complement(30905..32692)
                     /locus_tag="ACJE1S_000356"
     CDS             complement(30905..32692)
                     /locus_tag="ACJE1S_000356"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HGG0805929.1"
                     /translation="MNIRKIRVEKIRQFMIKEKLDAYLILSADPHLNEYLPSFYQSRA
                     FVSGFKGSAGSLIITSQDAFLWTDGRYWIQAQKELEGSGILLQKQDANNTFLKWLKEN
                     LNEEQNLGIDFSVLSLSLQKEIQKNCKAELKNIDLISLIWEDRPALPKNKVYEHELEY
                     CSYSRKEKLLLVREKMNKLQAKNHLISSLDDIAWITNLRGNDVCYNPIFLSHLLILEG
                     KALLFIDREKIDFELEKKLNLDGICLKEYNKIQDELKKLQNTNLLIEPSKTTALLIEI
                     LDKSVEILEEINPSTHLKAIKTDKEIAHIQNAMIEDGVALCKFFTWLEENIKNNTQIS
                     ELDIDTKITEFRSQSPYYISNSFSTIAGFNANAALPHYKAEKESFSYIQKNGLLLIDS
                     GGQYKNGTTDITRVVAIGELNGEQIHDYTLVLKAHIAIASTIFPKDIAMPLLDAITRA
                     PLWQEQLDYTHGTGHGVGYFLNVHEGPQTLSYFSPVLEKTKAKEGMLTSIEPGIYRTG
                     KWGIRLENLVVNAKIENPKNKDFGEFLYFKPLTLCPFEISCIDKTLLDAKEKAWINTY
                     HKEVYEKLSPKLHDNLKALKWLKERTKAV"
     gene            complement(32777..33334)
                     /locus_tag="ACJE1S_000357"
     CDS             complement(32777..33334)
                     /locus_tag="ACJE1S_000357"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805930.1"
                     /translation="MNQIEQFLENLSPREKILIYLTTILLAILLSFHFYHSYLKSFFN
                     HEFFIQSNDMDKIITTNQDLNQQIKQLEKELVFIQDKIKSYENYLNVFNKNYETYIKN
                     LQNLALENNLWISNIEWLQSEENSYRKISLNIFGDFSPILSFMKQLENSDLHYQIHKF
                     EIDNTTSLNLHLKLTLSFISLAKLK"
     gene            complement(33334..34407)
                     /locus_tag="ACJE1S_000358"
     CDS             complement(33334..34407)
                     /locus_tag="ACJE1S_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805931.1"
                     /translation="MKNKAHFISFENLIYKQKNGNFEEDDLFKELTKECDLQNPFEYQ
                     LAFLKQDQIYHCFLARVAKLPKTQFCFPQPLVFQSLFLENKIKEENFCILEIKPQKVF
                     LCFYEQGKFKTFKTLDFCDNIEEFINKSRILELLQHYESKILLSTKAHEIFNLISAKA
                     KLPFKMIQEDKIALSKHSIHHLDKNANFIKHYKKYLPWYFKFIFLFALSFIISIVVLS
                     LIDFAQYQNAKTTHIQNEISQNKIYEIQEKQSQKLKANIEQLQLEIQTQNLLLEKYSE
                     QLSKITQNFKADKNTILILTKAIAWLNHHSLRISNLMIDKTLITIKFSNEEDFNKALQ
                     FTSPQFSLISQDKSLHEITLRAL"
     gene            complement(34397..35272)
                     /gene="era"
                     /locus_tag="ACJE1S_000359"
     CDS             complement(34397..35272)
                     /gene="era"
                     /locus_tag="ACJE1S_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HGG0805932.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMNGEDQIIFIDTPGLHESKATLNQFLIQSAIKSMGDCDVILFVASIFDSVKDYENF
                     LSLNPKVPHIIVLNKVDLADNGTLLKKLNEYAKFSKYFKAILPYSCKKKNYQKPLLNE
                     LCKLLPEHEYFYDSEFLTPSSQKDIFREFILESIYENLSEELPYSCEIMIKNTKETSN
                     LFIIDAQIITDTNSHKAMLIGKDGTTLKRIGKDARFKISKLIQNKVLLKLFVIVKKNW
                     QKDEIFLKKILNYEE"
     gene            complement(35269..36588)
                     /gene="hslU"
                     /locus_tag="ACJE1S_000360"
     CDS             complement(35269..36588)
                     /gene="hslU"
                     /locus_tag="ACJE1S_000360"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009376 - HslUV protease complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HGG0805933.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESVIEIEISQSMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAAEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSSVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYEQLLKTENLELEFDDEAIKEIAKIASKANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            complement(36585..37127)
                     /gene="hslV"
                     /locus_tag="ACJE1S_000361"
     CDS             complement(36585..37127)
                     /gene="hslV"
                     /locus_tag="ACJE1S_000361"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009376 - HslUV protease complex
                     [Evidence IEA];
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HGG0805934.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            complement(37127..37570)
                     /gene="rplI"
                     /locus_tag="ACJE1S_000362"
     CDS             complement(37127..37570)
                     /gene="rplI"
                     /locus_tag="ACJE1S_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HGG0805935.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFELANLEKLKEELSKVTLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGTHEVSVKLGHAIHAKFNINIKAE"
     gene            complement(37585..38805)
                     /locus_tag="ACJE1S_000363"
     CDS             complement(37585..38805)
                     /locus_tag="ACJE1S_000363"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HGG0805936.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENVFIKDLREEFVKDYVFPMFRANTIYEGEYLLGTSIARPLI
                     AKTQAQIALQTRADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKEAP
                     NESEIIELDFQKGDLVAINGEHLNPAGLLSKLNELGAKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRAIESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQKHANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            38945..39190
                     /locus_tag="ACJE1S_000364"
     CDS             38945..39190
                     /locus_tag="ACJE1S_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG0805937.1"
                     /translation="MRVDKFLNAVNITKRRAISEDMCRSGVVGINGVIVKASKEVKVG
                     DIISLHFTDYTQEYKVLALPTTKNIPKNAQSEYVVKL"
     gene            39187..39594
                     /gene="tsaE"
                     /locus_tag="ACJE1S_000365"
     CDS             39187..39594
                     /gene="tsaE"
                     /locus_tag="ACJE1S_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HGG0805938.1"
                     /translation="MKEFILAKNELNTMLQTLPKQGVVLLQGELASGKTSLVQAWVSF
                     LNLDEKVDSPTFSIMQKYENQDICIYHYDIYQEGLEGLLKNGLFENFFEEGLHLVEWG
                     DENLKKALLKLGIPSLEIKISVEDDKRKYVIHE"
     gene            39587..40315
                     /gene="lptB"
                     /locus_tag="ACJE1S_000366"
     CDS             39587..40315
                     /gene="lptB"
                     /locus_tag="ACJE1S_000366"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HGG0805939.1"
                     /translation="MSKLEIVNLEKIIKKTKIIQGISLELNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDITKEPLNKRARLGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHEKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQSLINELKKLDIGILITDHNVRETLAICDRAYVIRSGSLLASG
                     NAEEIANNKDVKKYYLGAEFKLLD"
     gene            40315..41565
                     /locus_tag="ACJE1S_000367"
     CDS             40315..41565
                     /locus_tag="ACJE1S_000367"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HGG0805940.1"
                     /translation="MLRQKTTQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEENP
                     FLSVQEPIQTHEHNKNYFDSFYKRNANSAFVDNKGLATKSVYELLNEQIIPPLFPTSK
                     SQELAGKIVECLNHEGYFEYDEEILKDYDINELERIRARFKFLDPVGVGAKDYKEAFL
                     FALENIELDAELYDFCKMLIQDFENIQNYTKEPLYKEALAIFKRFSIPPFLEYFEDSR
                     VIIPDIFVYRENNEIKVKINDDYYPEISIETDGLTHEYLNHYIKEAKNLVDALMMRKA
                     TLYKIGLMIVEYQYDFFMGKDIKPMTFKDLALDLERNASTISRAVANKYLSCDRGLIP
                     LRDFFAFALDEEGETSNVGVKDFVANLVKNENRSKPLSDSKILELIKKEFKVDIGRRT
                     ITKYRKHLNIPSSTDRKKLYELEG"
BASE COUNT        13986 a         5818 c         7345 g        14487 t
ORIGIN      
        1 agagataaga taatatcatg gcaaaaaaac aactctcctt aacaagactt agttttccta
       61 tattttggga tttactttct aagtatttaa ctgtgattat caataccgct atggtgtcgc
      121 attattctaa ttttcttgtt ggtgctatgg gcgctggaaa tcaaatttta gatcttttta
      181 tcactatttt ttcattttta agtgtgggtt gtagtgtgct gatcgcacaa gcaattggtg
      241 caaaagatca tgttttagca agaaaagtga ttcatcaaag tttgttctta aatgcacttt
      301 taggctttgt atgcggtgtg cttattttat ggcatgggga gtatttgctt tatcttttaa
      361 aaattccaca agaattgctc aaagatagcg aaatttactt acatatgctt gcaatttgtt
      421 tgttttttga tgccataggt attgttttag ctgctattgt aagggtttat aatatggctt
      481 attgggtcat gtttataggt tttttgatgg atatagtggt gatttgtgga aattattatg
      541 ttttgcatta tacaaagtca gaactttttg gaatagggct tagtaatatt tttgctcgca
      601 ttgttgctat agtggcttta cttgtgatac ttttttacaa gcttaaaatt catcttaaaa
      661 tcaaagaaat gataaaactt gaaaaagagg tattaaaaaa ggttttaaat ataggtggat
      721 tttcagcagg ggaaaatctt ttgtggatag tccaatacac tatagctttt gcttttgtag
      781 caagtttagg cgaggcgagt ttgagtgtgc aaacgattta ttttcaaatt tcaatgctta
      841 tcatgcttat aggacaagct acgagtatag ctaatgaaat tatagtaggt aaattaatcg
      901 gtgctagata tgaaaatata gcttataaac atgcttggcg tgctttatat tttagtgtaa
      961 tagcgagtgc tttagtggca cttttgaact atctttttca agattttact atgcaaattt
     1021 tagggcttaa agaagagtta aaaaatttaa tgataccttt atttgctctt tcaatctttc
     1081 ttgaaatttc acgaactttt aatatagtca tggtgaattc cttgcgcgca agtggcgatg
     1141 ctaagtttcc attttttagc ggacttgttt ttatgatggg ggtatctttg cctgtgggtt
     1201 atgtgctttg ttttcatttt aatcttggaa ttttaggggt ttggatagga ttttgtgcag
     1261 atgagttttt gcgtggaatg gtaaattcat acagatggaa aagtaaaaaa tggcaaggca
     1321 aagttctagt ttaaaatcat ttatttataa agatgagtgc tatttttatt ctaaaaaacg
     1381 cataaaaact ttaagattaa ggctcaatga aaggggtgaa tttgttctta gtattcctta
     1441 tttttgcacc tttaaaagtg tttatgagtt tttagataaa tcaagttctt ggatgaatga
     1501 ggcaaaaaaa agatttgaaa aaaaagcctt aaaagatgat gagttaattt ttttagctaa
     1561 aaaatataaa attatttttg atgaaaatgt caaaaaaact tattttgata aagataaaat
     1621 tctttgtcaa aataaagcaa aattagattt atttttaaga caaaatgcta aaaagatttt
     1681 tactttttat cttaaaaaat ggagtaaaaa aacaggttta ttttatacgc atttaagcat
     1741 taaaaatatg aaaacgcgtt ggggttcttg caatcataat aaagcttata ttaatttaaa
     1801 tttaaaactc attcaaaaga gtttaaaggc tattgaatat gtggttttgc atgaaattag
     1861 ccatttaaaa tttcccaatc atagcaaaga attttatact tttatagagc attttatgag
     1921 tgattttagg caaagagaga aagaattttt aagttaaaaa tgttatattt atagtttatt
     1981 tttcaaaaaa ggcataatat gactttggat tttgatttta tttataatgc agataatgat
     2041 atttttgaat atttattgcg tttttatgcg aaaaattaca attatatcct tagcaaagaa
     2101 gaaaatacct atcatttttc tatcgatgca gatgaagaaa atttaaagac tttttgtgat
     2161 tctttgaatt tcatgagtca tagcgttttt ttgaaaaaat ttgatgtaaa agcggggcag
     2221 ggttttagcc cttgtatacc agaagataaa gaattttcga aattttctta tattacgcat
     2281 ttaaattcta atgcttatca agaaaaaaaa cttttaaaca aaaacgaatg gggcgtgttt
     2341 tgtgagtgtg aattttcaag caatttatca gaatttgaaa aaatcaatga agaaaatttc
     2401 aatacttttt taaatcttgc ttttgatttg ttaagtcaag aaaaaaagat ttatttaaaa
     2461 gataaaaatg gcatttatga attttctttg tttaagaacg aatttatagg agatttttta
     2521 cttccttgtg atattaaggc tataaattca gtttttgttt gttcaaatga aaatttaaaa
     2581 cttcttgcaa gtttagaaaa acctttgatg aagctaaggt ttaatgctat gtttagaaaa
     2641 aatcacaatc ttgattttag tgattttaaa attagacttg ctagggattt attttgtttt
     2701 gctttaggtt taaaactttt tgaaaatgag tataaatttt taagcgtaaa aaagatagaa
     2761 gagtatcaaa aagattttta tatcagtgct ttagatgagc aagtggtggt tttggaaggc
     2821 tttgaattta tcaatgctaa ggcaagagag cttatttttt ctaaagaaga taaaaatatg
     2881 gcaagaattt cttatcttgt aagccgttgt aaagaaaagg cttttatttt agagctaagt
     2941 aaagatgatg aagatatttt gcttatcaac aaagagctta atttgcttaa actttccttg
     3001 ccaaaacaca gcaaagagct ttatgaagag atacaaaaag atgaaatcgg cgcaagactt
     3061 ttagaaaatt ttgccaaaga atttccgctt ttaaatgaga gttttgaact taaagacaat
     3121 ttttattctt tactttgctt ggtgggtagg gtgttaaatt tggatgaaaa tttacacaag
     3181 gcaggagaaa aacttttaaa aatcgcagac gaatctaaaa tgcctcgtgg ggtgaagatt
     3241 gattatcgtt tgaaagaaga taaaagtttt gattatacta ggaccttaag atctactatg
     3301 agctttatgc tagcaggggt agatagtgca aatatcgctt atggagctgt ggaaagcttg
     3361 gcttattttt tacgcgatac ttatgatgat ttaagagaaa aaaaacagag tgaaatggcg
     3421 ctaattagtg gatctttgtt tgagcataaa gccttgctta gaaatacttt aaaacatctt
     3481 aaaaattgtc agttaagcga tgtgccactt aggatataaa cttcaaattt caggacttgt
     3541 tcaaggcgta ggttttcgtc ctcttgtctt tgagcttgcc tctgaattag gacttcatgg
     3601 agaagtaaaa aatgatggtt ttggggtaga aattatcctt gcttgtacca aagaagaatg
     3661 cgagaatttt atctataagc tcaaagagaa gctcccacct ttagcaagga tagatagtat
     3721 tgatatcaca gagcaaacga ctacaaatta tacccatttt agcataggta cttctttgca
     3781 aagtgcaaaa actactccaa tgcttagtga ttttgcactt tgtaaagagt gtaaaaaaga
     3841 attttttgat gaaaaaaatc cgcgtttttt atatcctttt atcacttgta cgcattgtgg
     3901 gccaagattt agcatcatta aaaatctccc ttatgatagg tgcaatacca caatggaagc
     3961 attgaaaatg tgtgagtttt gcaaaagtga gtatgaagat cctaaaaata ggcgttttca
     4021 tgcccagcct ataagttgcc ctcagtgtaa aatcgatgtt tttttaaaaa ataaaaaggg
     4081 tgaaattcta gctcaagatg atgaagcttt taagacctgt gctaagcttt taaagcaagg
     4141 aaaaatttta gctatcaaag gcatgggggg atttcatttg atgtgcgatg cctttaatct
     4201 tgaagctata aaggagctaa gacttagaaa aaaccgcccc aaaaaaccct ttgccttaat
     4261 gtgtagagat gtgagcgatg ctaaagagct ttgttttgtg gatgaagagg aagaaaaact
     4321 gcttggttct attttagctc ctatcgtgat tttaaaagct aaaaaagcct tttctttaat
     4381 cgctcctgat gtggataaac tcggcattat gttagcctat actccactgc atcttttact
     4441 ttttagatat tttgatgggg ttttagtagc aacaagtgca aatttaagtg gtgaaagtat
     4501 tattaaagat gaggataatt tgcttaaaaa gcttggcaat gtttttgatt tttatctaga
     4561 ctatgcaaga gaaattcaca atccaagcga tgatagcatt gctcaagtta taaatggaaa
     4621 aactatgttt ttacgcactt caagaggttt aaatccgact tatttggaaa ttaaaagcga
     4681 taaaaaagga gtttttttag ctttgggttc ggagttaaaa aatgaatttg tgatttttta
     4741 tgaaaataaa cttttgattt ctccttatat aggagattta aaaagtattg atgtgcacga
     4801 gagatttttt aaacttttag aattttttaa acaaaattat gatttgaaat ttgatgcgat
     4861 tttgtgcgat aaacacccgc attttagcta tgcaaaagaa tttgaagaaa ggattaaaat
     4921 ttctcatcat tatgcgcatt tttgtgcggc ttattttgaa tacgaagaaa attttgcaaa
     4981 agatgaaaag gctttagctt ttatttgtga tggaacaggt tatggcgaag atggtaaaat
     5041 ttggggtgga gaagtttttg taggaaattt aaaagaatat gaaagaattg cacattttga
     5101 aaatttcact cttataaata gtgatattaa aaatatacaa aatttagcct taagtcttat
     5161 ttttcattat gatttagaag ataaggctaa ggatttttta gcaaaaattc caaaaataaa
     5221 acttgaaaat cttaaaaaaa ttcacaccca ctctacactt caaacaagtt ctttaggacg
     5281 cattatcgat gcttttggga gtatagtttt taatatggaa aaaatttctt acgaagcaca
     5341 aatcgggctg atgtgtgaag cattttatga tgaaaattta gacttttctt acgagctttt
     5401 ttctaaggat ggagaaatca actttaaaga actcattgag ggtgctttaa aggatgaaaa
     5461 aagcaaggct attacaggta tgtttaatgc cttggcaaat tttatcatag attttagcaa
     5521 agattatgat ttaaaagtgc ttttaagcgg aggggttttt caaaacaaaa ccttgcttga
     5581 aattttaaaa gctaaaaatt ttgatttttt tataccttta aagtaccctt gtaatgatag
     5641 ctccatagcc ttaggacaaa tggtgcattt tttaaattta gaaaaataaa gcaaatattc
     5701 taaaaactca taatttttta atgcttttaa ggttaaaatg aaacaaaaaa tatagaagga
     5761 aagaaaatgt gtaaagattg cggctgctct ataaattcaa gccatacgca tggtcatcat
     5821 cacgaccacc atcatgaaaa tccaagttta aaagaaagca aaaccataga agtgatttct
     5881 aaaattttaa gcaaaaatga tgaagaagct aagcacaata gagcgcattt taatgaagct
     5941 aacacgcttt gtatcaattt aatgagttct ccaggtagtg gaaaaactac gcttttagaa
     6001 agcacgatta aggctttgaa aaatgaactt aaaatcgctg tgattgaagg ggatttagaa
     6061 accaataatg acgctctaag ggtaaaaaat gccggagctt tggcatatca aatcactaca
     6121 gggcaaagct gtcatttgga tgcttttatg gtgcatgagg ctttgcatca tttagccatt
     6181 gatgatgtgg atttgctttt tatagaaaat gttggaaatt tggtttgtcc tgcaagttat
     6241 gatttaggag agcatttaaa tgtggttttg ctttcggtaa ctgaaggaag tgataaaccg
     6301 caaaaatacc ctgtgatgtt taaaaaggct gatatagttt taatcacaaa ggcagatttg
     6361 gcccatcatt ttgatttcga tattaaagag gcgactaggt tgattaaaga attaaatcct
     6421 agagcagata ttatcaccct tgatgcaaaa aatggcacca atatggagct ttggtataag
     6481 gtgcttaaac ttaaaaagga gcttttttaa tgtgtttgtc tataccttct gaaattttag
     6541 aaatcgatga gttaaacaat gctttagtac aaactttagg cgtgaaaaga aaagttaatt
     6601 tggatttgat tgatgaacct ttaaaacaag gcgattatgt cttaatccat gtaggcgttg
     6661 ctatggaaaa aatcgacaaa gaagctgcac tagaaagcat taaaacctat caagaaatag
     6721 tagaaaaaat gaatagtgga gagataaaaa gtgatgaagg agatttgggt ttaaatgaat
     6781 tttatcgatg aatttagaga taaagaaagc attttagctt taaaaaaact catagaacaa
     6841 gaacttaaaa atcctattaa tatcatggaa atttgcggtg ggcatacgca tagtattatg
     6901 aaatatgccc tgccttctat tttgccaaag gaaattaact ttatccatgg gccaggatgt
     6961 cctgtttgtg ttatgccaag agttcgcatt gatacagcta ttaagctagc ctccatgaaa
     7021 gatacgattt tttgtacctt aggggatctt ttaagggtgc ctggaagtga aatttcttta
     7081 ctggatttaa gagctaaagg ggctgatgtt agagcacttt attctccgct tgaagttttg
     7141 gaaatcgcta agcaaaattt aaacaaaaat atcatctttt ttgctatagg ttttgaaacc
     7201 actacgccta tgagtgcttt acttcttcaa aaggttatag aagaaaaaat aaataatgtc
     7261 ttttttcata tcaatcatat cacggttcca gcacctgtag aagcgatcat gaacgatgaa
     7321 aatgtaaaaa tcaatgcttt tttaggccct tctcatgtga gtgtgataac aggttatggt
     7381 atttatgagc ctttagcagc aaagtttaaa acccctatag cggtgagtgg ttttgagcca
     7441 gttgatattt tagaaagtgt gttaaatatc ataaaacaaa gcaatgaagg cacttttaaa
     7501 gtgtataatc aatacaaaag agccgtaagc aaagaaggca atgttaaagc acaaaattta
     7561 gtaaaaaaat actttagggt gtgtgatttt gaatttcgtg gcttaggact tattaaagat
     7621 ggaggcttgg agctaaaaga agaatttagc gcttacgatg cgagtaaaaa atttgattgc
     7681 acggtgcaaa gcaaaaatga aagcaaagcc tgtatttgtg ggcaaatttt aagaggttta
     7741 gccaagcctt atgattgtaa agtttttggt aaggcttgta cgccaagaag tcctatagga
     7801 agttgtatgg tttctggaga gggtgcttgt gcggcgtatt ataaatactc aaaggtgaat
     7861 gtatgaaaaa tatttcctta gcccacggag gtggcggaga agagatgaat gagcttttaa
     7921 ctaagctttt taagatcttt gataatgaaa ttttaaacgc aaataatgat gcagcgattt
     7981 tgggaaattt ggctttaagc acggattctt ttgttttaag tccgattttt ttagatgaag
     8041 aggtcaatat aggcaaactt tgtgtttgtg gttctattaa cgatgttttg atggtgggtg
     8101 ctaagccaaa atatctaagc ttagggctta tcttagaaga aggttttgag ctagaaaaat
     8161 tagaacgcat tgtaaaaagt attaaagaag aatgtgaaaa atgtggagtt atgttagttt
     8221 gtggcgatac taaagttgtt cctaagggta aagcagatga aatttatatc aacactacag
     8281 ccttaggtga aattatttct aaaaaagaaa gtaaaaatat caaagcaggg cttagcatac
     8341 ttctttcagg tgatatagga aggcatggag ctagtgtttt aatcaaaaga aatgagttag
     8401 aagctgatgt taaaagtgat tgtaaggctt tggataaaga ggttttagag cttttagaaa
     8461 aagatataaa ggttgtagca atgagagatg ctactcgtgg ggggcttagt gcggttttaa
     8521 atgagtgggc aaagcaaagc ggaaatgatc ttttgatctt tgaagaaaaa atcatcgttc
     8581 aagatgaggt tttaggactt tgcgagcttt ttggttatga agcttttgag cttgcaaatg
     8641 aaggcacttt tatactgtgc gtggaaaaag aagatgagtt aaaggctttg gaaattttaa
     8701 aaaaatacaa tgtaaatgct agtatcatag gagaagtttt agaagagaaa aaagctcgtg
     8761 tgattttaga aaatgcttat ggagctaaac gctttttaga agctcctaag ggcgaacttt
     8821 taccgagaat ttgctaatgc acgagcttag tatagtagag tctttaatcg aactttgcga
     8881 agaaaatgct tttgctcata aagctaaaag tgtgcaagag atttatgtaa aaataggtcg
     8941 tttaagcggt atagaagtag agctttttag gcgttgtttt gaaactttta gggaaaattc
     9001 agagctttgc aaaaatgcaa agctttttat agagcttaca ccgcttgaaa ttttgtgttt
     9061 aaaatgtgac caaacaagtg ttttagaaga aaatgttttt aagtgcccta aatgcgaaag
     9121 tatagagtat aaaatctcac aaggtgagga tttgcacctc atgcgacttg tgatggagtg
     9181 agtcaaaaaa ttgatttttt gcaaaacgat aatctcttaa ataaagaatt ttagggaaat
     9241 tttacaagaa atttaaagag caaaataaga aatgagattg tcaataatct aactttttat
     9301 aatccttgca agctttagca aagtggcgat tagaaattct tttttagcaa gtttggaatt
     9361 ggttttaagt tcgtattcac ttttaagcaa aaggttaaaa atttctttat aatgtttgat
     9421 ttttaagcta aaagcttgtt cgtttaaatt ttgtgctact tgaggcggag gagtataacc
     9481 taagagttct ttaaaatcca ctttcccata aattttagca taaagagcaa ttttaaaaag
     9541 acggtaaaag gcagaactta aagagttaat caaagcaatt tcattaaaat tatccaaaat
     9601 cttctcaagc tcatttttaa aatcggctct ttttaaaatc ttttcaaaga agctttcaaa
     9661 acttcctatg tttaagctat aacaatattg ctctatggtt ttttcatcca ctcttaagcc
     9721 gctgaattta ttaagctcgc tagcagcaag atacaaattc tcatcaaagc ttgtaaaaag
     9781 ggtaaataaa gcattttgag tgatttctat atggagttgt tttgctttta tgcttaaaag
     9841 ctttatccct tctcttgcgt tattggcctt gaaaaaacgc acaaaattag gagaaaagat
     9901 tttttctata tcgctttgtt tagagctttc atcgtaaagt tctaaaagta agaaattgtc
     9961 tttattattt ttacaaagct caactaaaac tttaagttct tttgtgggaa tttttttaga
    10021 agttttgatt tctaaaagct ttttttcgct aaaaagcgaa cctccgctta gaaaatcact
    10081 tgcacgagta aagctgtatt cttcaaaaaa taattttaaa atttcatccg cttggtattt
    10141 ttccttgata aaatcagcat aaagctcact ttgaaaatta tcagctccat aaagaaagaa
    10201 aaaattatca atttgatttt tggaaagtaa attttgaagt tcttttctat acattacttt
    10261 cctttctaag tctttgggtg atttttgcat aaatttttgc catgatgatg tcagcttcta
    10321 aaatttgcac ttctacgctt tctagtaaat ttacccgcgt atcataaagg atgatatcag
    10381 ctcctttgat ctcatcatca agttttgcta tacaaattcc atcattttgc actactaggg
    10441 ctttaaattt tttgcctata tttttagctg cccatctcgc aaattttcta tccataaaat
    10501 cataagcgac tttatcagcc tctctttcaa gcacgctaag gttttcgcaa gtgctttgta
    10561 tatttaaaag taggtaatta aaaagttttt catctttttt ttgtttagct tttaaaagtc
    10621 tatgtaagat aagatcagaa tacctgcgta taggacttgt aaaatgtgag tatttgtcaa
    10681 aacctaaacc aaaatgcccc ccgttttcgc tagaatactc tgcctttttt tgagctttaa
    10741 tgatgagttt atccacttcc gctcttaagc caagctcatc ggctaaagct tgtatatcgc
    10801 gtataagctc aggcaggtta ggttttagtt ttacatcgat tccaagctct aaaagttcat
    10861 ttaaaagtct atctatcttt ttcatatctg cactagagtg atttctaaaa acacctacat
    10921 cgatgagttt tgcggcggct ttgttggcta aaagcataca atcttcgatt aaattatgcg
    10981 aaggcgtgtc tttttcaaaa atcgtgcttt ttagacttaa gttttcatcc aaattcatcc
    11041 tcagttcttc agtgcggaat tcaaaggcat tcttaagacg atttttgcgt aaagtttttg
    11101 tgatttcaaa aagcttataa agccaagaaa gttcttttaa atctggcttt tgaatcaaaa
    11161 tttcatccac ttcatcataa ttaaaacggc gttttgagtt gatgatagtt tcaaaaagtt
    11221 cttcttttac gactttgcag tctaaatcaa gtgtgatttt aaaacaatat gccaagcgat
    11281 ctaaatgagg ctttaaagaa cagatatttt cactcaaagg gcgaggcaac ataggtatgg
    11341 caatatgtgg aaaatatata gaaaatccac gacttctagc ttctttatca atagcactat
    11401 aagcataaac atactcgctc acatcggcga ttgcgacata gagttcgcgt ttttctgtat
    11461 caaaataaat cgcatcatca aaatcttttg catgtatagg atctatggtg caaaaaggca
    11521 aagttcttag atctaagcga ttttcataca tgcttgcatc aacgctatct ccattagcta
    11581 gagcttcttt gatacaagca tcgctaaatt cgttattttt attaaaaaga gctaaggaga
    11641 ttttttcatc tacgctttca tcatcgatgt gccctaaaac ttctatgatg ttgttatctt
    11701 gattttctat ttttaaaatt gtccctaaag gtagtgcttt tagagatttt tgcgaggctt
    11761 ttaaggcggt acttaatcct gttttgatat tcatcccaag cacggcttcg ccgtatcttt
    11821 tggtgataac aagtgaggtt tcattagctc tttttaaaac caaaaccact ttagcactag
    11881 ggcgtttttt ctttaagggg agtaatttag cagcaacgat atctttgtaa tttgctcctt
    11941 ttaaattttt attttctata agcaaatctt ttttaaaact ctcatcaaaa cactgtaaaa
    12001 atcctgtgcc cttgctcgaa atatcaaggg ttccaaaaac atagccatta ttaagatagt
    12061 atctattttt gtgttctttg atgatgttat tagctagaag ctctcttaga atttgtttaa
    12121 attcattgct aacttcatga gcacttatgc cgtaattaag attgtttaaa aattctttca
    12181 ctgctttact ttatgtaaat tttcttgaga attcttgcat aaagtttata aaaaaaatat
    12241 gaaatttaaa actttattgt tataataagc tctttaattt tgaatttatt aaggagtaaa
    12301 ataatggctg ttacagttta ttatgacaaa gactgtgatt taagtttgat taaatcaaaa
    12361 aaagtggcaa ttataggctt tggatctcaa ggacatgctc atgctatgaa tttaagagac
    12421 aatggggtta atgttgtcat cgggcttcgt gaagatgggg caagtttttc taaagcaaaa
    12481 agtgcaggtt ttgaagtgat gagcgtaagc gaagcttcga aagtagcaga tgtgattatg
    12541 attttagctc ctgatgaaat tcaagcagat atttttaatg tcgaaataaa accaaattta
    12601 agtgaaggca aggctatagc ttttgcacac ggttttaata tccattatgg tcaaattgtt
    12661 gttccaaaag gtgtagatgt tatcatgata gcacctaaag caccaggtca tacagtaaga
    12721 aatgaattta ctctaggtgg tggcactcct tgtttgatag cgattcatca agatgagagc
    12781 aaaaatgcta aaaatttagc cttaagttat gcaagtgcga tcgggggtgg acgtacaggt
    12841 attatagaaa caacctttaa agccgaaaca gaaacagatc tttttggtga gcaagctgtg
    12901 ctttgtggtg gacttagtgc tttgatccaa gcaggatttg aaactttagt tgaagcagga
    12961 tatgagcctg aaatggctta ttttgagtgt ttacatgaga taaaacttat cgtagatttg
    13021 atctatcaag gtggaattgc agatatgcgt tattctattt caaacactgc agaatatggc
    13081 gattatatca caggaccaaa aattatcact gaagaaacta aaaaagctat gaagggcgtt
    13141 ttaaaagata tacaagatgg aaattttgct aaagatttta ttttagaacg ccgtgcaggt
    13201 tttgcaagaa tgcatgcaga acgcaaaaat atgaacaatt ctttaatcga gcaaacaggc
    13261 cgcaatttac gcgcaatgat gccttggatt agtgctaaaa aattaatcga taaagataag
    13321 aactaaaatt gtcaaaaaaa ctgattcaaa tcaagcgtta tttaatcatc gctatacttt
    13381 ttttaatatg cgtgatttta tttttgggaa ttttgattca atatcaagat tctcaaaatg
    13441 cattaaaatt cgctcaaaat tctagtaaaa atataacaat agaacccaag caagaaaata
    13501 tatccaatga aaatcatttg ggtattttta aagaaattcc ttataaagac gaaaatgata
    13561 attttcaaga aaacaatcaa agcattttag aagagcaaat aaaagattta aatttaagta
    13621 gtattataga tgaaaattta agccttgtag tagaacaaaa tttaagcaag gaagaaaatc
    13681 ttacaaaaga tatgaattta agtaaaacaa aacaagcccg ccttgctatc attatagatg
    13741 atatggcgaa cataagtcaa gttagggctt tacaggcatt aaaactcaaa cttatccctt
    13801 cattttttcc acccgataaa aatcatatcg ataccccaaa acttgctcta aaatttgatt
    13861 tttatatggt gcatttgcct ttagcggcga tgaattatac taagcctgag cttgatacct
    13921 taaatccaag cgatagtgaa aagcgtattt ttaaaaaaat acaacaagtg aaaaaagatt
    13981 ttaaagattt aaaatttatc aataatcata caggaagctt atttacaagt gatgaaaaag
    14041 caatgaaaaa actttataaa gcctttgaaa aagaagaatt gatttttgta gattctaaaa
    14101 ccatagcaag ctctaaagcg cctaaagtgg ctaaggcttt ggggcaaatt tatatacaaa
    14161 gagatgtgtt tttagacaat cgcgatgatg ttgcttatat caaaaatcaa ctcatagaag
    14221 cggtaaggct tgctaagcaa aaaggctttg cgatagctat aggacatcct agaaaaaata
    14281 cttttaaagc cttagagcaa agcaaagatt tgcttaaaag tgttgagtta gtgtatttaa
    14341 gtgagattta tgcaaagtga actaccaagc gcttatctag agctttttaa agagttgaaa
    14401 aatcctccta aaaaacttta ttataaagga aatttaaaac tcttagaaca aagaaagata
    14461 gccattatag gctctaggcg tatgagcact tacactaaaa attgcgtttt tgagctttca
    14521 aatttgctta aaaattcaaa gataagtgtt gtaagcggag gtgctttggg tgttgatatc
    14581 agtgcaagta tggcggctat gccaagcact ataggggttt ttgccaatgg tcttgatgaa
    14641 atttatccta gaagcaatga aaaaattata aaacaaattt atgaaaatgc tttggcttta
    14701 agcgaaaacg aatcctacta taagcctaag ccttatgatt ttttacttag aaataggctg
    14761 attgtctctt tgagtgaagc cgttgttgtt gcgcaagcag atttgcaaag cggctccatg
    14821 caaagtgcaa gacttgcttt ggagcttaat aaacctttat atgttttacc ccaacgcaaa
    14881 aatgaaagcg atgggacaaa tttactctta caagaaaaaa atgcgaattt gcttttagat
    14941 tttaaagaat ttgcaagttg ttttggggtt atagaagaag aaaaggatga atttttagac
    15001 ttttgtagac agggcgtaag cgtggatgag gcaactcaaa tttatggaga aaaagtctat
    15061 gagtacgagc ttgaaggaaa aatttccata gaaggtcttt ttataagggt tttggtatga
    15121 gagctttggc cttagatgtg ggtttaaagc gtataggcgt ggcgctttgt atagataaaa
    15181 tcgccattcc tttagaaggt ataatcagaa aaaaccgcaa ccaagctgca aatgaagtta
    15241 aaaatttact tcaaattcat gatatttctt tattgattgt aggtattcct aagggaggat
    15301 cgagcgaaga agaaatgaca aggcgtatca agcattttgt atctttgctt gaattcgata
    15361 aagaaattcg ctttgtagat gaaagcggaa caagtaaaga agctttagga tatggtgtgg
    15421 ctaatacacg caaaaaagat gccaagctag actctttagc agctttaatc atgataaagg
    15481 attattttgg aatataatct agccggtatt tataatgata aagaacttga aaatcttaaa
    15541 aattctttta aattgcccaa aaaaatatgc tgttttataa atcgcctaaa atgtgataat
    15601 ttaacacttg aaagagaatt tcaagatttg aatttagagt atgaaaagct taatgagtac
    15661 tgctatcttt ttaaggcttg tgataaaagt attttaagct ctatgcaagc ttttaatgaa
    15721 tttaaatttt atatacaaaa ttatgcttct tatttgtgcg ctttaaattt ggatgtaaag
    15781 gcagggcaga gtgttttaga tatgtgtgca gcacctggtg gaaaaagtat caatcttgct
    15841 aattttatgc aaaatgaagg ttatctagct tgcaatgaag caagtaaaga taggtttttt
    15901 accttgcaaa agaatttgaa aaattatgga gtaaaagctc gagtttttat gaaagatggt
    15961 aaaaatatag gaaatttatg ccctttaaaa tttgataaaa ttttacttga tgcaccttgt
    16021 tctactttag caaaaatggg tttagaatta gaaaaaagtt ctaaagagat taaaaacata
    16081 gctaaacttc aaaaaaaact tttacattct gcactcaagg ctttaaaagt aggcggagag
    16141 cttgtttata gtacttgcac ttttaccaaa gaggaaaatg aagaagtgat agaaaatgct
    16201 ttaaaaagtg attttgatat agagcttttg gatataaatt tagaaaatgc tttggtaaaa
    16261 aatgggcaaa gtagcgaatt tgaagcgatt tctaaatgta aacgcatttt accttgtgaa
    16321 gaatacgacg gattttttat tgctaaatta aggaaaaatt gattttaatt ctttaaggct
    16381 aagttcgcat agaagctaaa atttcattat atattaaaat tattcacatc ttcaagtaaa
    16441 ttcacaaaaa aacttaaaaa acaataaatg tttttttgga aaatttaaaa cttaaagtcc
    16501 tatttttagg gctttgaaaa gaaaatcaca tcgtgaaaag cctgtgaata aaaaataaat
    16561 tttttaaaac ttaaaaagat aatttcactc gtaatttcta attttttcta gtttaggtgc
    16621 tataacaaaa cgacaatagc tttgattggg attgtgtata aaataatgct gatgataatc
    16681 ttctgctttg taatattttt gaagtttata aatttgtgtg acaatcggaa gtaaaaaatt
    16741 aacttgttct ttttttataa aatcttctat ggtattttta tcgctttggt tttcataaaa
    16801 aattgccgaa cgatattgaa ttcctatatc agctccttgt ttgtcaaagc tagttggatc
    16861 atgaatttta aaaaataagc ttaagatttg ttctaaggaa attttggctt cattgtaaat
    16921 gattttaacc acttctatat tgccatcgcc attgcaaaca ctttcatagc taggattgtc
    16981 atttccacct gtgtagccta cttcagtgtg tataatgcct tcaaaatttt caaaagcagc
    17041 ttctacacac caaaaacatc caccacctaa aatgatattt ttcataaaga atttccttaa
    17101 agatttagcc tataaaaggc taaataaaga atttatttgt agtttttaat cgctttttct
    17161 aaaatttcaa cagcagcttt ttcatctttg aaatcttgca cttttaccca tttgttaggt
    17221 tctaagattt tataagtttc aaagaaattt ttgattttat ttagagttgc ttgtggtaaa
    17281 tcagtatagg ttttgatatt gtcatatctt gcgtcgattt tagaatttgg cacagcaaga
    17341 agtttttcat ccattccact ttcatcttcc atgattaaaa caccgattaa acgacatgga
    17401 ataactgcgc ctgcttggat agggtattca tttaagacta agatatccac aggatcgcca
    17461 tcatcagcta aggtatttgc gataaaacca taatttgctg gataaaacat cgcgctagcc
    17521 ataacgcgat ccaccatgat cgcaccgcta tctttatcga tttcgtattt aatacttgag
    17581 ccgtatggaa tttcaattac agcattgatt ttgtttggaa tatctccgat tttgattttg
    17641 cttaagtcca ttttttatcc ttatatactt tgaatttttt taatcaactc tttcatatca
    17701 gcaacgatag gttcgatagt gcgttctcca tcgatgatga aatgaagttt tttcttttgg
    17761 taaaaagaaa tgatttcttc tagtggctcg gtatacactt tcattctatt ataaaacact
    17821 tcttcgttgt catctgcgcc acgacttctt cctaaaacgc gatctttagc tacttgttca
    17881 ctcactctta cttcgattac gccttttaga caaatttcat tttgctcgct taaaacttta
    17941 tcaaattcta ccatttgctc cacacttctt ggatagccat cgataataac tgtttttgta
    18001 ggagcagctt ttagcgctga aactatagta tttacaacta catctaatgg aactaaattt
    18061 cccttagaaa taaaaccatc tatggttttg ccaagttcac ttccgcttgc tacttccgct
    18121 cttaaaagat ctcctgtaga ataatgagta acatccgcat cagcttgtgc aatcaaacta
    18181 gcatctgtag tttttccgct tcctggtgca cctataatta aaaataattc tttcatttta
    18241 tattctccct taatttgatt cctaattctc tcatggcttc attgctagca gctgaaggag
    18301 catctgtcat caagcattgt gctctttgag tttttgggaa tgctataact tctcttatgc
    18361 tatttgctcc tgttactagc atgataagtc tatcaagccc tatagcaata cctccatgtg
    18421 gtggagcgcc aaaacttaga gcatcaagta aaaatccaaa tttttctttt tgctgttctt
    18481 catcgatatt gagtaattta aaaacttttt gctggatatc atttttatga attcttatac
    18541 taccaccacc cagttcaacg ccattaagta caacatcata agcgatagat gatatttctt
    18601 ctaagtcggc ctcattgata ttttttggca tagtgaaagg gtggtgcatt gcagaataac
    18661 ttccatcatc attttgttca aacataggaa aatcaactac ccataaaaat tccaaagcat
    18721 cagggttgat taaattaagt tctccagcta ggaaaattct aaaccttccc atataatcaa
    18781 gcacagtttt tttaacccct gcgccaaaaa ataccacatc gcctacttca agttcacaac
    18841 gcttaataag ttcgtttaaa tcctcttcgt taaaaaattt gcaaagtgga cctttaagcc
    18901 catcttcttt aacttgtata aaggctaagc cttgagctcc aaatttgcgt acaaattctt
    18961 caaatctttg catttgtctt tttgaaaaga tagtatcacc ctttggaacg cgtaaagctt
    19021 tgacacgatt ttttttgcta tctttggcaa tatttgcaaa aatttcatta tttgactttg
    19081 caaagatatc tataacatcg atcagtttta aatcaaaacg caaatcaggc ttatcacttc
    19141 cgtagttttc catagcctct ttgtaaggca tttgtctaaa agggatttga atttctttac
    19201 cacaagcttt aaaaatatct tttaaaaagg tttcagccgt agcaatcaca tctttttgct
    19261 cgcaaaaact catttcaaca tcaatttgtg taaattcagg ctgacgatct gctcttaaat
    19321 cttcatctct aaagcattta gcaatttgaa aataacgatc aaagccgcta cacattaaaa
    19381 gttgtttgaa aagttgtggg ctttgaggaa gagcataaaa ttctccttga tgtacgcgtg
    19441 atggtacaag ataatctctt gctccttctg gagtggcttt ggttaagata ggggtttcaa
    19501 cttctaaaaa tcccatattt gctaaagaat ttctagcagc tatacaagct ttggagcgta
    19561 gagcaaaatt ttcataaagc ttaggatttc ttaaatctaa aaagcggtac ttaaggcgta
    19621 attcttcatt tacactttca tcacctatgc caaaaggagg gacagcactt tcattttcga
    19681 taatgagctt gcttactact acttcaattt caccggtttt taatttagga tttgtaagtc
    19741 cttctcctcg gggtcgaatt tttccttcgg ctattaaaac aaattcattt cttgtgcgag
    19801 aggctatttc atgagcttct ttgctatcat ttggatcgca tacaagttgg ataataccac
    19861 tacgatctct taaatcaata aaaattacgc cgccatgatc tcggtagcta ttaacccagc
    19921 cgcaaagttt aaccacttcg cctatgtggg tagaatttaa gtctgtattg taatgacttc
    19981 gcaaaatttt tccttgaaaa ttaatttttt taacatataa gttaaaatta taatattttt
    20041 attcttttgc ttagctaaga tttgttataa ttttttatgc aaaataaaat agattataaa
    20101 aacattaaaa aaatcggact tgcggcgcgt cctaattcaa atttagacaa ggaaattttg
    20161 attctaaaag aaattttaga aaaaaaaggt gtggagcttt tgctctataa ggaaagttct
    20221 gaaattgtaa aattaccaaa atacgacctt gatacattgt ttgagctttc agattttgta
    20281 atttctttgg gtggtgatgg aactttgatt tctttatgcc gaaaagcttg cgagtataat
    20341 aaagcggttt taggaattca tgcgggtcat ttaggatttt taacagattt taaggtggat
    20401 gaagctgaag ttttttttga agcttttttc aggggagaat ttagggtaga aaatcctttt
    20461 ttattgagta ttattttaga aagtaatgat ggtcaaatca tgcaaaaatt tgcttttaat
    20521 gatgtagtga tcagcaagga tagaaaagct tctatggcgc atatagaggt atttcgcaaa
    20581 gctaaaaaat ttaacgaata ttttggagat ggtcttatag tagccactcc agcaggttct
    20641 acagcataca atttaagtgc aaatgggcct atagtttata ctttagcgca agcttttata
    20701 cttacgcccg tttgttcgca ttctttaacc caacgcccta tagtactgcc taagggcttt
    20761 gatcttgaaa taggcgcaaa agattgtatt tttagtatag atggacaaga aaattataaa
    20821 atgaatgatt ttaaaagcgt taaagtgggg cttagtgata aaagtgtggc acttatacat
    20881 cctaaaaatc gagattattt tcaaatatta agagaaaaat taaattgggg acattgatga
    20941 taaatagagt tttgatgaaa gaaaatcttg gctttaaaga ggttgagctt gaaatttctc
    21001 aaggacttac agtctttacg ggtttaagcg gggcgggaaa gtctgtactc tttaagggta
    21061 tattgtctgc ttttgcatta agcgagagtg aggcaaagct tgttgagatt gagcttgatg
    21121 ataagataga tttagaagaa tacggcatag aaggtgaaga ggaaaatgtt tttaagcttt
    21181 taaaggataa aaatacaaaa tatttcatca ataatcaaag tatttcaaaa aaaagtttga
    21241 ttcatttgag taaaaaattt attaaatatc taagtgctaa agaaatcaat gaatttagca
    21301 atgagaaatt tttaaatctc ttagatgctt tagaatgtgc gaaaaatcct gaatttgaag
    21361 attttttatc tcattttaaa gatgattata aacaatggct tcaaatttca gaagaattga
    21421 ctacaatttt agaagaagaa aaaaggattg aagagcttaa agaattagca agcacgcaga
    21481 ttgaaagaat ttctaaaatc aatcctaaag tcggagaata cgaagagctt ttaaatctta
    21541 aaaagaaatt atcaaaaaaa gacaaaatag aagcagcttg ggaaaaggca agtgctattt
    21601 ttgaattaga aaaagtagtt attgatgctt taaatcttag cgaaaaagat acgagttttt
    21661 ttagtgaatg tttaaacgaa cttcgcatca tagctgaaaa tgaaaaaatc gaagatttgg
    21721 attttgatat agaagaagta ctcaatagaa tcgaggattt atcctcttta atcaagcgtt
    21781 atgagagtat agaaaatgct ttagaggtat tggaaaataa aaaaaatgaa ctcgctcatt
    21841 atgataattt aagctttgaa aaaaaagaac ttgaaaaaaa actagaaaaa atcgaaaaga
    21901 aaatcaatca aagtactcag ttattaactc aagctcgtat gcaaaattta aaaactttag
    21961 aggatttttt aaacgattat ctaaaaaacc tttatatgaa aaatgtaagt ttggaattag
    22021 tagatacttc aaaaatcact tctttgggaa aagatgagat caaattaagt atcaatgctg
    22081 caaatttaaa aaatttaagt tcaggtgagc ttaatcgttt aagacttgct tttatcgcga
    22141 ctgagtgtag aattttaaat tcaggcacag ggataatatt tttagatgag attgatgcta
    22201 atttaagtgg caaagaagcg atgagtatag ccaatgtttt aaatgagctt tctgcttttt
    22261 atcaaatttt tgctatatct cacttaccgc agctttcttc aaaagctcat aatcattttt
    22321 tggttgaaaa aaatgcttct tgtagcacgg ttaaaaaact taaagataaa gagagaatta
    22381 aagaattagc aagaatgata agtggcgaga ctattacaga tgaagctttg gaatttgcta
    22441 aaactttgtt taaagcttaa gcggaatttt tatttgtttg tgttagaatt gggatttttt
    22501 taattttatt ataaagattt agttttaaaa aaggtatttt tatagattat gaataaaaaa
    22561 attttgctga tcgatgataa taaaatgctt ggaaagcttt tagctaaaaa gatacaaact
    22621 actttaaatc atgaagttga tattgttttt agccttgctg aagttaaggc attgcccaat
    22681 gatgagtatt ttttaacttt tgcagattta tgcttgcctg atgcacctaa tggggaagtg
    22741 gtggattatg ttttggcaaa aaattggcct gttattgtat taaccgcgag caacgataaa
    22801 gctacaagag ataaatttat ggataaagat attttagatt atatctttaa agaaagcgat
    22861 acctgtatag atcagattat agattctatt gtcaagcttg agcgttatgc taagactaag
    22921 gttatcttag ccctaagtaa acttcctgaa cgcaatgaaa taaaaaaaat tctcacacaa
    22981 agaaaattta atgttttggc cgctgctcat ggtgaggagg cgatgagtta tttaaatgac
    23041 aatagcgatg tgaagcttat tatcgctgat gcgaacatgc ctgttattag cggaagtgag
    23101 cttttaagtg aagtaagagc gcgttttagt gatgatgaat tgggtgtaat tattttaggt
    23161 gataaagatg atgctttaga ggctagtttg cttgtaagtg gagctaatga gtatttggta
    23221 aaacccttaa gtaaagaaag tttaaattgt cgcttggata aatgtcttca ttatatggcc
    23281 aatatgcagt ttttaagcat ttataacaat cttgatccta tttccgggat aaaaaattcc
    23341 aatgctttat tgagttgcgt tgaagattat ttaaatgaaa ttgtaagcaa agaagaagaa
    23401 tttgcttttg cattcttaga tatagataat ttaagaaatt taaacgaaga atacggctat
    23461 gaagtagggg ataaaattat taaaatttgc gctgatgaga ttgttaatga aaccaaaggg
    23521 cgtgatattg tgggtagata tagtgctgaa aaaatttgca tagtattaaa gaatatttcg
    23581 caagaaaggg cgattaaaat tctttctcgt attcgagtca atataaaaaa agttggaatt
    23641 ttagtcaatt tagatgaagt cttttttact gcttctatag gggtagtttt tgctaagagt
    23701 ggagataaat ttgaaatctt agtcgataaa gcttcaaaag cactttcgca agctaaggct
    23761 aatggtaaag atagagtaga agtatgttct taaatcttga atttaaagat ggtctaaaga
    23821 tcatcgatac tcattgtcat ttagatagtg aagtatttaa agaggattta gatgagcttt
    23881 taaagcattc atttgataat ggtatagaaa aaatcatcat accaggtgca gatattaaag
    23941 atttacctta tgcagcagaa cttgctagca aatatgaaaa tgtatttttt gccgcaggtg
    24001 tgcatcctta tgagctagaa ggttttgatg agaaaatttt aagagcatat ttgcaagacg
    24061 aaaaatgcgt ggccgtaggt gaatgtggac ttgattattt tcgttttaaa agtgaagatt
    24121 taaaagagag agaaaaagaa aaagaggagc aaaaaaggct ttttgtagct caacttgagc
    24181 tagctaaaga atttaaaaag cctgttatta tccattctcg cgaagcaaat aacgatactt
    24241 atgaaatttt acacgagcat tctaaagatc ttgttggagg ggttttgcat tgttttaacg
    24301 caagcgaaca tttattgcgt cttagtgatg atggatttta ttttggaatc ggtggtgttt
    24361 taacatttaa aaatgctaag aatttagtaa atattttacc acaaattcca aaagatagat
    24421 tgttgctaga aaccgatgct ccctatctta ctccagagcc ttatcgtggt aaaaggaatg
    24481 agcctttatt gactcaattt gtagccaata aaatgagtga aattcttgat ttaccaaggc
    24541 aagagctttt aaggatttgc ttggaaaatt cttacagatt attttttaaa ggttaaatat
    24601 gaaaaaaatt atattttgtt ttattttatt ttataacttt ctttttgcac aaactaccac
    24661 tcctgaattt tatgaaagac aaatgagtgt tttaagaaat ttagacattg atccaagttt
    24721 tatcagtgat ttagcttttg tgcaaagtca gcaggattta agatcaaagc atgctccgac
    24781 tttgattgat ggtatacaaa atttctcaaa agttactcct atgataagaa aaattctagc
    24841 acaacaagaa gttcctgaag aaattttata tctagctatg gtagaatcag gattaaaagc
    24901 gcatagcgtt tctaatgcta aggcagtagg tgtgtggcaa tttatgcaac ccacggcaag
    24961 aaatttagga cttaggattg atgcttatgt tgatgaaaga cgcgatcctg taaaatctac
    25021 atatgccgcg gttcattatc taaaaagctt aaaagaagaa tttgggaaat ggtatttagc
    25081 acttttagct tataattgtg gaaatgggaa attgcgtcaa gcaataaagc aagcaggaag
    25141 tgatgattta agagtattaa tcgatcctga taaaaaatat ctttctttag aaactagaaa
    25201 ttttatacgc aaaattttaa ctttagcttt cttggctaat gatagggatt ttttacttga
    25261 taaagatgga gctttggtta attatgcttt aaataacgat tttgcaaagg ttgatgctcc
    25321 ttcttcggtc gcattaaaag atttggctaa aaatttaaat atggatttgg caacttttaa
    25381 aaaatataat ccacatttta aacatggttt tactcctcca ggtaaggggt attatatgta
    25441 tattccttta aataaagtag ctttttttga taaaaatttt aaagttgaaa agcttgcaaa
    25501 agtagataca accataccta tgactaaaat ttatgttgta aaatcaggcg attctttata
    25561 taaaatcgct aaaaaatata atactagcgt agagcaaatt cgagaattaa ataaaattgc
    25621 caaaaatcac ttaagtatca atcaaaaatt aatcatacct attaaggaga ataaaaatgc
    25681 aaactataaa acaaaagcta aagaaaactt tacccaagtt gttagccgct agtttagttg
    25741 caactttttc tagcggatgc ttcggaggtc ttttttctag tgtaggttca gcacaaatat
    25801 attatccaag taatgatttt catagtagtc cttcaggatc cggaagtaaa gggactatga
    25861 aaccttatac tataaatggt aaaacttatt atccaactgt tgtatcagtg ggtgaaacag
    25921 cagatggtat agcaagttgg tatggaccgg gctttcatgg taaaaaaact tctaatggtg
    25981 aaacttataa tcaaaatggt ttaaccgcag ctcacaaaac tttacctatg aataccattt
    26041 taaaggtaac taacctaaac aataaccgcc aagttaccgt gcgtgttaac gataggggtc
    26101 cttttgtaaa taacagaatt atagatcttt ctaagggtgc tgcaagtcaa atcgatatga
    26161 ttgctgcagg aacagctcct gtgagacttg aggttatagg ttttggttcg gctaattcag
    26221 gtaataatgt cgttcattca aatataaatt atggagctag tggcggaatt gcaaataatg
    26281 gtcaaattta tgaaggtgga aattttatgg tgcaaattgg agcgtttaaa aatccatcag
    26341 gagctcaaac tatagcatct agatataaaa cttatagaac ctattcttca accatacgca
    26401 aaagttcggt tgatggcttg agtcgcgttt tcttgacagg atttagaagt gaagaagagg
    26461 caagagattt tgcagcaagt ggtgcatttg ctggtgcttt tgttgtgcgt gagtaaaaaa
    26521 tgatagaatt gatattttta gatgtagatg gttgtcttac agatggtaaa atcatctaca
    26581 cttccaatgg aagtgtgatt aaagaatttg atgttaaaga tggtgcagct atagaagctt
    26641 ggattaagct gggtaaaaaa attgctatta tcactggaag aaattgtcct tgtgtgagtg
    26701 ctcgtgctaa ggatttgaaa atagaaattg tacatcaggg tgttaaagat aaattaactt
    26761 gtgctaaaaa aattttagaa gagctgaatt tagatttttc tcaatgtgcg gctatagggg
    26821 attattttaa cgataaaaat ttacttgaaa atgttggcct tagttttaag cctaaggatg
    26881 cacataggga tttaaaagtt gatatcacac ttgataaaaa aggcggaaaa gcagctgtgg
    26941 ctcaaatgat agagtatatt ataaagaaaa atgatatgca agaggaatgg gataagcttt
    27001 ggctataaga atttttggaa ttttgatcgc tctttttact attactttta caattttaag
    27061 tttgcaagat ccttattctt taaatattaa atcctatgct ttaaatttta aaaatatcga
    27121 agcttccgat ttaaatgctt acgagcttaa tgcaagcaat gtaaaatcat actataaagc
    27181 gcaatcttgg gcgcgttata cagacaaaga tgagtttgat aattttgtca attttaattt
    27241 ggattttaat ttaagtgcaa ataaattgga acttaaaggc aaggagatgg ataaggtttt
    27301 gcttgaaggc aatgttacct acataggttt aaataataca aaaatttttg ctgataaagt
    27361 agagtatgcg cctaaaaata aaattttaag caccaataca ggatttaaag ctttgataaa
    27421 tggaagcatt attaacggaa atactttaaa ctacgatgta gaaaagaaaa ttttacaagt
    27481 tcaaggagtg aatgcgtggt tagaaagata attttatttt tgatgagtat cagtatatct
    27541 ttagctagcc agatagaggt taaggcctta aatttttatt cggatgaaaa taagggtgaa
    27601 agcatactca gtggcaatgt tgaaatcata agaggtgatg atattttaac tgctgaaaaa
    27661 gtgattatat atacagataa aaatcgcaaa cctatgcgtt acgaagctgt gcaaaatgct
    27721 aattttaaaa ttgttttaaa gggaaaaact tataagggga gtggagataa atttatttat
    27781 aatgtggcta aagatattta tgaaattgat ggaaatgctt ttattaatga acttgaaagt
    27841 aatcaaaagc tttatggtga taggataata gtagataaga gaaataatgt ttatcgtgtt
    27901 gaaagcaagg ataaaaagcc tgctcgattt atatttgatt tagagcaaaa atgataataa
    27961 gtgctaaatt tatcacctct ttagacaaat ttgataaaaa ttttgcatcc cattttagtg
    28021 aagtggcatt tttaggaaga tcaaatgtgg ggaaaagttc tttaattaat tctttatgta
    28081 agcaaaaaaa gcttgctaag agttctgcta cacctggaaa aacgcaattg attaatattt
    28141 ttgaagtttt atgtaagaag gatgaggata aatttagtat ccattttatt gatttacccg
    28201 gttttggtta tgcgaaagtt tcaaaaaatc taaaagaaat atggaataaa aatttagatg
    28261 agtttttaaa attaagaagt tcgattaaac tttttgtgca tttgattgat tcaagacata
    28321 caaatttgga tattgattta aatttggaca agtatttaaa aagtttttta aaacctgatc
    28381 aaagagtatt aaaagtgttt acaaaatgcg ataaactcaa tcaaagtgaa aaagctaaac
    28441 ttaaaaatag tttcaaagac gctattttaa tatccaattt aaacaaaatg ggtcttgatg
    28501 atttagaaca tgaagttatt aagcaaactt taggtttata aaatgagaaa aactatcagt
    28561 gcttataagg taaaactgaa tggaagttat gtttttttag gttttttgtg tatcttatat
    28621 caaattttag gctctgtttt tctttatatg cctttgcttt acggtgtatt tttttgttat
    28681 atgtattttc ttttagaaga aaggcaaaaa acctttaaca aacttgattt taggtggtat
    28741 ttttctttat tttttttatt ttttacagat ataacttatg atttttttct cttttcttct
    28801 tggcttgcct ttgttatttt ttattatact tgcgcagatt ggattaaaac aaatttaaaa
    28861 ataggaaaaa ttattcctat catacttgtc ctttgtgttt atgcttttat ttttatttta
    28921 gatgctattt tttcgtatgt aggagatcaa gagtttaaaa tgccaaattt tggctatatg
    28981 atatcgatta tgtttgagtg tttgtttgct tatatgttat ataggagtaa gttctaatga
    29041 gaatgcgttt ggttgttggc tttatattat tgttttttat atttttatta agccgtgtgt
    29101 attatttaag tataaaatca aatgtgtatt atgaagaact tgccaaacaa aatgctataa
    29161 aaactgaatt tatagtccca actcgcggac aaattttaga tcgcaatggc actcctttgg
    29221 cgattaatga tttgggtttt agtatttcta ttaagcctta tttaactcta aaaagggcaa
    29281 atagaggtgt attagaaaaa gaattaaatc aacttcaagg gttttttcct gatttaaaca
    29341 ctactaagct tgctgaattt tataagagga atgactctta ttataatcaa gattttatta
    29401 aaatcataga ctttatacct tcgcaagaaa tgatgaagca ttattcagaa ctcaatttaa
    29461 atcaaaacat acgcatagat cctgcagtgc aaagaaaata tccttttgga aaactagctt
    29521 cgcatatcat aggctatgta ggcaaggcag atttgcaaga tattaaagaa aatgaaattt
    29581 caaagcttac caattttaca ggaaagagtg ggatagagcg ttattataat gatgttttgc
    29641 aaggagaaaa aggaactaag atttataagg ttaatgcctt aaatcaagaa gtggagcaac
    29701 tctcctatac ttcggcactt tctaatgata tagaacttac catagatata gaacttcaaa
    29761 gctttttaac gcaacttttt gagggtaatg cgggtgctgc tattattatg gatattagcg
    29821 atggttctat tttggcagca ggaagctttc ctgaatacga tttaaatcct tttgtaaccg
    29881 gaatttctta taaagaatgg gacgagcttt ctaataatct tgatcatcct tttacaaata
    29941 aacttatcaa tggatattat cctccaggtt ctgttgttaa aatgggtgtt ggtttgtctt
    30001 ttttaaattc aaaaagtatc aatccctcaa cccaattttt ttgtaatggt agtatagagc
    30061 ttggcgggag attttttcgt tgttggaata gagcagggca tggagctgta gatttaaaac
    30121 atgcgataaa agcaagttgt gatgtttatt tttacgatgg aagtttgcaa gtgggtatag
    30181 atcaaataag tcgtacttta tcacgcatag gctttggagc taaaaccggt gtggatttac
    30241 ctaatgaatt tgtgggaatt ttgccaagta gagaatggaa aatgcaaaga tataagcaag
    30301 cttggtttca aggtgatacc ttaaatactt ccatagggca aggaaatttc ttggctacac
    30361 ctatgcagat tgctagatat acagctcaaa ttgcaaaagg tgctgaagtt gtacctcact
    30421 ttctaaaaag tgtagaaaat aacaatacta tcacagaaga taaagcgcaa gatagtaatg
    30481 aaattttcac cctttttgaa aaaagtcaac tcccctatat aagagatgcg atgtatgcgg
    30541 ttgctaatga gcaaggaggt acttcttatc attatttgcg caatttagaa gtaaaagttg
    30601 ctgctaaaac aggaactgca caggtggtgg gtttttctca agctgataaa aatagggttg
    30661 atgaaaagca acttagatat tatacaagat cgcacgcttg ggtaacttct tatgcacctt
    30721 attctaaacc gcgttatgtg gttactgttt tagtagaaca tggtggaaga acgataagct
    30781 caggtgttgc tacagcaaag atctatcaaa aaatgataga acttggatat tttaaaccag
    30841 aaaataaagc taatagccca aaaaagaact agaaaaaata ttatttttct aagatttctt
    30901 tttgttaaac cgctttagtt ctttctttga gccattttaa agcttttaaa ttatcatgaa
    30961 gcttaggaga gagtttttca taaacttctt tatgataagt attaatccac gctttttctt
    31021 tggcatctaa taaggtttta tcgatacaac tgatttcaaa agggcaaagc gttaagggtt
    31081 taaaatataa aaattcacca aaatctttgt ttttgggatt ttctattttt gcattaacaa
    31141 ccaaattttc aagcctaata ccccattttc ctgttctata aattccaggt tctatagaag
    31201 ttaacatacc ttctttagcc tttgtttttt caagcacagg gctaaaataa gaaagagttt
    31261 gcggaccttc gtgaacattt aaaaaataac ccaccccatg accagtgccg tgtgtataat
    31321 caagctgttc ttgccacaaa ggagctcttg tgatagcatc aagcaaaggc atggcaatat
    31381 cttttggaaa aatagtactt gctatggcta tgtgtgcttt taaaactagg gtataatcat
    31441 gaatttgttc cccgtttaac tcacctatag ctacaactct agtaatatcc gtggtgccat
    31501 ttttatattg cccacccgaa tctataagca ataatccatt tttttggata taagaaaagc
    31561 tttctttttc ggctttataa tgcggtaaag ctgcattagc gttaaatcct gctatggtag
    31621 aaaaactatt gctaatataa taaggacttt gagatctaaa ttcagtgatt ttagtatcga
    31681 tatcaagctc gctgatttgt gtattatttt tgatattttc ttcaagccaa gtaaaaaatt
    31741 tacataaagc cactccatct tctatcatgg cattttgtat atgtgcgatt tccttatctg
    31801 tcttgatagc ttttaaatgg gtgctaggat tgatctcttc taaaatttca acgcttttat
    31861 ctaaaatttc aatgagtaaa gcagttgttt ttgaaggctc aatgagtaaa tttgtatttt
    31921 ggagtttttt aagctcatct tgaattttat tatattcctt aagacaaatt ccatctaaat
    31981 ttaatttttt ttcaagttca aagtcaattt tttccctatc tataaaaagc aaagcctttc
    32041 cttccaagat tagtaaatga cttaaaaata taggattata gcatacatca tttcctctta
    32101 aattagtaat ccatgctata tcatcaagac tggaaataag atgatttttt gcttgtagtt
    32161 tgttcatttt ttcacgcact aataatagtt tttcttttct agaataggag caatattcta
    32221 attcatgttc ataaacctta tttttaggta acgcaggacg atcttcccaa atgaggctga
    32281 ttaaatcgat attttttagc tcggctttgc agtttttttg tatttctttt tgtaaagata
    32341 aggataaaac tgaaaaatct atacctaaat tttgctcctc atttaaattt tcttttagcc
    32401 attttaaaaa ggtattattt gcatcttgtt tttgtaaaag tatgccacta ccttctaatt
    32461 ccttttgtgc ttgaatccaa taccttccat ctgtccataa aaaagcatct tgagaagtga
    32521 tgattaagct tccagcagag cccttaaagc cacttacaaa agctctgctt tgataaaagc
    32581 taggcaaata ctcatttaaa tgcggatcag cacttagtat caaataagcg tcaagttttt
    32641 cttttatcat aaattgtctg attttttcaa ctcttatttt acgaatattc atttttttcc
    32701 ttttaaattt gcattatttt ataaatcttt ttatcaaaat aacattatag cctttataga
    32761 taaaaagcta tagtatttat tttagttttg ctagggaaat aaaagaaagc gttagtttta
    32821 aatgaagatt taaacttgtt gtattgtcaa tttcaaattt gtggatttga tagtgcaagt
    32881 ctgaattttc taattgtttc ataaaggaaa gtattggact aaaatcacca aaaatattga
    32941 gtgaaatttt acgataagaa ttttcttctg attgcaacca ctctatatta gagatccaaa
    33001 gattattttc aagagctaga ttttgcaaat ttttaatgta tgtttcatag tttttattaa
    33061 aaacattaag atagttttca taacttttta ttttatcttg gataaaaaca agctcttttt
    33121 caagttgttt tatttgttgg tttaaatctt gatttgtcgt gattatttta tccatatcat
    33181 tactttgaat gaaaaattca tgattaaaaa agctttttaa gtaagaatgg taaaaatgaa
    33241 aagagagtaa tattgctagg agtatggttg taagatatat taaaattttc tccctaggac
    33301 ttagattttc taaaaattgc tcaatttgat tcattataat gctcttaaag tgatttcgtg
    33361 caaggattta tcttgcgaga taagactaaa ttggggactt gtaaattgaa gtgctttatt
    33421 aaaatcctct tcgttgctaa attttatagt gataagggtt ttatctatca tgagattaga
    33481 aattcttaaa gaatgatgat ttagccatgc aatagccttt gttaaaatca aaattgtatt
    33541 tttatccgct ttaaaatttt gcgtaatttt agataattgt tcagagtatt tttctaataa
    33601 aagattttga gtttgaattt ctaattgaag ttgttctata ttggccttaa gtttttggct
    33661 ttgtttttct tgaatttcat agattttatt ttgtgaaatt tcattttgta tatgtgttgt
    33721 tttggcattt tggtattgcg caaagtcaat taatgataaa actacaatac tgattataaa
    33781 acttagagca aataagaaaa taaatttaaa ataccaagga agatattttt tatagtgttt
    33841 gataaaatta gcatttttat caagatggtg aatgctatgt tttgaaagtg cgattttatc
    33901 ttcttgaatc attttaaaag gaagttttgc ttttgcactt ataagattga aaatttcatg
    33961 agcttttgtg cttagcagta ttttactttc atagtgttgt aaaagctcta aaatacggct
    34021 tttgtttata aattcttcta tattatcaca aaaatcgagt gttttaaaag ttttaaattt
    34081 accttgctcg taaaaacata aaaatacttt ttgcggtttt atttccaaga tacaaaaatt
    34141 ctcttctttg attttatttt ccaaaaataa gctttgaaag acgaggggtt ggggaaaaca
    34201 aaattgagtt ttgggtagtt ttgcaacccg tgctaaaaaa caatgataaa tttgatcttg
    34261 ttttaaaaaa gccaattgat attcaaaagg attttgaaga tcgcattctt ttgttagctc
    34321 tttaaaaagg tcatcttctt caaaattgcc atttttttgt ttgtagataa gattttcaaa
    34381 acttataaaa tgagctttat tcttcataat ttagaatttt tttaagaaaa atttcatctt
    34441 tttgccaatt tttctttaca atgacaaaaa gctttaagag tactttgttt tgaatgagtt
    34501 ttgaaatttt aaatctcgca tcttttccta ttcttttaag cgtcgttcca tcttttccta
    34561 taagcatggc tttatgggaa tttgtatcgg tgataatttg cgcatcaatg ataaaaagat
    34621 tggatgtttc tttggtattt tttatcataa tttcacaaga ataaggcaat tcttcgctta
    34681 aattttcata aatactttca agtataaatt ctctaaaaat atctttttga gaactaggtg
    34741 ttaaaaattc actatcataa aaatactcat gttcaggtaa gagcttgcac aactcattta
    34801 gcagtggttt ttggtagttt tttttcttgc aagaataggg caagatagct ttaaaatact
    34861 tgctaaattt tgcatattca ttgagttttt ttaaaagtgt gccattatca gctagatcta
    34921 ctttgttaag aacgatgata tgaggaactt tagggtttaa gcttaggaaa ttttcataat
    34981 cttttacact atcaaaaata ctagcaacaa acaagataac atcgcaatca cccatagatt
    35041 ttatagcgct ttggataaga aattgattaa gcgttgcttt gctttcatga agaccaggtg
    35101 tatctataaa gatgatctga tcttcaccat tcatgactat agctttgatt ttacgccttg
    35161 tggcattttg tttgtgagaa actagggcga ttttttcttc tagcaaggaa ttaattaaag
    35221 tgctttttcc cgcattggta cgccctatga tgctaacaaa gccacttttc acaaaatata
    35281 ccttgcaaga tctttatttt ctataatatc tccaagtttt tcttccacca tttttttatc
    35341 aactacgaat tttttacccg catactcatc tgcttcaaag cttaaatctt caagcaattt
    35401 ttctataact gtatgcaagc gtctagcacc tatatcttgc atttcttcat tggctttaga
    35461 agcaattttt gcaatctctt taatcgcttc atcatcaaat tcaagttcta aattctcagt
    35521 ttttaaaagc tgttcatatt gttttaaaag tgaattttta gggcgtgtta gaatttcata
    35581 aagtgcttta tcatcaagac tatctagctc tactcttaaa ggaaaacgac cttgaagttc
    35641 agggattaaa tcgcttggtt tgctaagatg gaaagctcct gctgcgataa aaaggatatg
    35701 atcggttttt aaagtgccga tctttgtttg tacgcttgag ccttcaacta taggaagtaa
    35761 atctctttga acaccctctt tgcttggatc ttggcgattt gaatttccac ttgaaaccgc
    35821 aattttatca atctcatcta taaaaataat tccttcattt tccgctcttt ttaaagcttc
    35881 acttttgatg ctttcttgat ctaaaatctt ctctgctgct tcatttttaa gggcattttt
    35941 agcatcttta attttcattt cttttttgac ttttttactg ccaacgccta taactttaac
    36001 tatatcttgc attgctccca tttcaggcgg taaattagga tttgtatcaa acatgctttg
    36061 tgaaatttct atctctatca cgctttcatc taaatcccca tttctaagtt ttgtcctcat
    36121 tttttcaagg ctatttttat attcttcttg tttttcatca ctgatgcctt taggtaaagg
    36181 gggaagaagt ttttctaaaa ttttattttc tataaattca tcgattttat ctttattttt
    36241 ttctctttgt tcatttttta ccaaatttaa agctgcattt gcaagatctc ttaccatgct
    36301 ttctacatca cgacctacaa agcctacctc tgtgtattta ctcgcttcga ttttaataaa
    36361 aggaaagccc atcatcttag ccaaacgcct tgcaatttca gtcttaccca cacccgttga
    36421 tcctatcata aggatatttt ttggcactat atcatcttgg agttcagggc taagctgcat
    36481 tcttcggtag cggtttctta gggctattgc tataattttt ttagcttttt tttgtcctat
    36541 gacataatca tctaaaaatt taacgatttc tttaggagtt aaattcattt ttcatcctca
    36601 attacataag tttttatatt ggtattggta taaatgcaaa tttcacccgc gatttgaaga
    36661 cttgatttga ctagttcttc ttcatccaaa tttgcatgtt ttgccaaagc tctagctgct
    36721 gaaagcgcgt aatttccacc gcttcctatg gcagcaattt gtccatcttc aggctcgact
    36781 acatcgcctg tgcctgaaag taagaaaata tgatttctat caagtactag catcatagct
    36841 tcgagttttc ttagatattt atcctttcgc cattctttag aaaaatcaat cgctgctttt
    36901 aaaagatcac ccttagagct ttgaagtaga ttttcaaaca tatcaaaaag attaaaagca
    36961 tcagctgttg atcctgcaaa acctgctaaa actttgccgt tgttgagttt tcttattttt
    37021 actgcattgc cttttaaaac agtattgcca aagcttactt ggccatctcc accgattacg
    37081 gatttgtttt tgcctttgta agctaaaata gttgttgcat gaaacattat tcagccttta
    37141 tgtttatatt aaattttgcg tggatagcat gacctaactt aacgctaact tcgtgagttc
    37201 caaggctttt taaggtatcg cattctaagc tttttttatc gatttctata tggctttgtt
    37261 cttttaaagc atgagcgatt tcatctttag ttaccccacc aaacaagctt ccattagctc
    37321 ctacaggctt tgaaatttca agtgtaactt tgctaagttc ttcttttagt ttttctaaat
    37381 ttgcaagttc aaagcgtaaa ttctccgctt cttttttctt atcactttcg tattttctta
    37441 aaacttcatt tgttgctgcc ttagcaaagc ctttagcaat gagaaaattt tgaccataac
    37501 catcttttac ttctttgatt tcgcctgctt ttccaagagc tttaacatct ttgattaata
    37561 atactttcat tttttaatcc ttgtttaaaa ttttcttcca ttttttcctg caataataaa
    37621 acgcaaagca ttcagtttga taaaacctgc tgcgtctttt tgattataca cttcatcttc
    37681 ttcaaaggta caataagctg cattaaataa actatcatta gcactttctc ggcctataac
    37741 cattacatta cctttgtaaa gttcaagttt tactctacca ttggcatgtt tttgagattc
    37801 gtcgattaga gcttgaagca tcattctttc aggcgagaac caataaccat tataaatcaa
    37861 acttgcatat tttggcataa gttcatcttt taaatgcgca gcttctctat ctagtgtgat
    37921 gctttcaatt gcacggtgtg cttttaagag tatagttcct cctggtgttt catagcagcc
    37981 acgacttttc attcctacat agcgattttc tactatatca aggcgtccta tgccatgttt
    38041 tgcaccaagc tcattaagct tgcttaaaag cccggcaggg tttaaatgct ctccattgat
    38101 ggcaactaaa tctccctttt gaaaatcaag ttctataatc tcactttcat tcggtgcttc
    38161 ttttggactt ttactccatc tccacatatc ctcttcaggt gcgtgtgcag gatcttctaa
    38221 aacaagtcct tcataagaaa tatgaagcaa atttgcatcc atagaataag gagatttccc
    38281 ttttttctta gaaatatcaa taccatgttt ttgcgcataa gctaagagtt tttcgcggct
    38341 atttaaatcc cattcacgcc aaggagcaat gatttttaag tcaggattaa aggctaaata
    38401 acctaattca aaacgcacct gatcatttcc ttttcccgta gccccatgac ttaccgcatc
    38461 agctcttgtt tgcagggcaa tttgtgcttg agtttttgca atcaaaggtc ttgctatgct
    38521 agttccaagt aagtattcac cctcataaat agtattggct ctaaacatag gaaatacata
    38581 atctttaaca aattcttctc ttaaatcttt aatgaaaaca ttttcttctt taatccctaa
    38641 tgaaagagct ttttttctag caggttcgag ctcttcgccc tgtccaatat ctgctgtaaa
    38701 agttactact tcgcatttgt attcatcttg aagccatttt aaaataatac ttgtatcaag
    38761 tccgccagaa tatgccaaaa cgactttttt tacttcattt ttcatagagt atcctttgtt
    38821 aatattgatt taattgtcaa attgtatcta aaattcatta aagaaaagtt tttaaattga
    38881 tgaagaaaag ttagtcaaag caaaatgggt ttcaaaaatt taattttttt ggtaaaattc
    38941 cattatgaga gtagataaat ttttaaatgc ggttaatatt accaaaagaa gagctatttc
    39001 tgaagatatg tgtagaagtg gtgtagtggg gattaatgga gtgatagtaa aggcgagcaa
    39061 agaggttaag gtaggagata ttatcagttt gcattttact gattatacgc aagaatataa
    39121 ggttttagct ttgcctacta ctaaaaatat tccaaaaaat gcacaaagtg aatatgtggt
    39181 gaagttatga aagaatttat tctagctaaa aatgaactca ataccatgct tcaaacttta
    39241 ccaaaacaag gtgttgtttt attacaagga gaattagcta gtggtaaaac aagcctagtg
    39301 caagcttggg ttagtttttt aaatttagat gagaaagtag attctcccac cttttctatc
    39361 atgcaaaaat atgaaaatca agatatatgt atttatcatt atgatatata tcaagagggt
    39421 ttagaaggac ttttaaaaaa tggtttgttt gagaattttt ttgaagaggg tttacatttg
    39481 gttgaatggg gagatgagaa tttaaaaaaa gctttgctaa aacttggaat tcctagcttg
    39541 gaaataaaaa tcagtgtaga agatgataaa agaaagtatg taattcatga gtaaactaga
    39601 aattgtaaat ttagaaaaaa ttattaaaaa aacaaagatt atccaaggca tatccttaga
    39661 attaaatagt ggtgaggttg tgggactttt agggcctaat ggagcaggaa aaacaactac
    39721 attttatatg atatgtggac taatatctcc aagtagtgga aaggtgctct tagatggttt
    39781 ggatattact aaagagcctt taaataaacg agcaaggcta ggcataggtt acttacctca
    39841 agaaagcagt atttttaagg atttaagcgt tgaagataat ttgcttttag ctgctcaaat
    39901 tttttacaag gataagaaaa ttttacatga aaaagtggag caaatgctcg agcttttaag
    39961 catagaacct attcgcttaa gaaaaggctt aagcttaagc ggtggagaaa gaagacgatg
    40021 tgaaattgca agatctttga tgtgtgagcc taaatttttg cttcttgatg agccttttgc
    40081 gggggtggat cctattgcag tggctgaaat tcaaagtctt atcaatgagc ttaaaaagct
    40141 tgatattgga attttaatta ctgatcataa tgttcgcgaa actttagcaa tttgcgatag
    40201 agcttatgta ataagatcag gctctttact tgcaagcgga aatgctgaag aaatagcaaa
    40261 taataaagat gttaaaaaat attatttagg agcggagttt aaactccttg attgatgtta
    40321 aggcaaaaga ctacccaggc tcctaaaact aagatttctc aaactctgcg ttcgtggttg
    40381 cctatattac aagcaaatat agaagattta aaagaaaatt tagacaaatt cgcagaagaa
    40441 aacccttttt taagcgttca agaacccatt caaacacacg agcataataa aaattatttt
    40501 gattcttttt ataaacgcaa cgcaaattcg gcatttgtgg ataataaagg tcttgctaca
    40561 aaaagcgtat atgaacttct taatgaacag attatacccc ctctttttcc tacaagtaaa
    40621 tctcaagaac ttgcaggcaa aatcgtagaa tgtttaaatc atgagggata ttttgaatac
    40681 gatgaagaaa ttttaaaaga ttatgatata aatgaattag agcgcataag agcaagattt
    40741 aaatttcttg atcctgtggg agtgggagca aaagattata aagaagcttt tttatttgcg
    40801 ctagaaaata tagaacttga tgcagagctt tatgattttt gtaaaatgct tattcaggat
    40861 tttgaaaata tacaaaatta cactaaagag cctttatata aggaagcatt agcgattttt
    40921 aagcgtttta gcataccgcc ttttttggag tattttgaag attctcgcgt tattataccc
    40981 gatatctttg tttataggga aaataatgaa atcaaggtaa aaatcaatga tgattattat
    41041 cctgaaattt ccattgaaac tgatggttta actcacgaat acttaaatca ctacatcaaa
    41101 gaagcaaaaa atttagttga tgctttaatg atgagaaaag caacgcttta taaaatagga
    41161 ctcatgatag tagaatacca atacgatttt ttcatgggta aggatattaa acctatgact
    41221 tttaaagact tagctcttga tttagagcgc aatgcttcaa ctatttcaag agcagtggca
    41281 aataaatacc taagttgtga tagagggctt atccctttgc gtgatttttt tgcttttgca
    41341 cttgatgaag agggcgagac ttcaaatgtg ggcgttaagg attttgttgc aaatttggtt
    41401 aaaaatgaaa atcgctcaaa acctttaagt gatagtaaaa tcctagagtt gattaaaaaa
    41461 gaatttaaag tcgatatagg acgacgcact attactaaat atcgcaaaca cttaaatata
    41521 ccaagttcaa cggatagaaa aaaattatac gaacttgaag gataatgctt aaatttatca
    41581 tttctttaat cttgcaaatc aaaaatataa aaatacactg aatttgtatg aatgtt
//
LOCUS       DBBXOW010000007        38752 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.007, whole genome shotgun sequence.
ACCESSION   DBBXOW010000007 DBBXOW010000000
VERSION     DBBXOW010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 38752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38752
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.007"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            35..352
                     /locus_tag="ACJE1S_000368"
     CDS             35..352
                     /locus_tag="ACJE1S_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HGG0805941.1"
                     /translation="MSVLVIGADEITPIKAVLYDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLDKEFSCS
                     KVE"
     gene            352..1047
                     /locus_tag="ACJE1S_000369"
     CDS             352..1047
                     /locus_tag="ACJE1S_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004289207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805942.1"
                     /translation="MLFGFDDKREFIPRVYSSLCKQELVKTFLIQYNASIDSALRIPL
                     SYAKSAKDLKMPFQNFLQDVIHTPFGKIKNIDKNLTLNISYFQKRKSLIFKTKIFQNV
                     DILRLLRAYFRGICFDAQVLFDFYVYDKISHQNQNRSIVQNDNLIIIDNKIAVLPLCK
                     EVDLQNLNIDNEIQKISKFIYQNQFEQIYIVCPRNKKFTHFIQIKHFLCDLNKTMLKL
                     VPYSITNKLIRRK"
     gene            1047..1538
                     /gene="fldA"
                     /locus_tag="ACJE1S_000370"
     CDS             1047..1538
                     /gene="fldA"
                     /locus_tag="ACJE1S_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HGG0805943.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVLNVADIDAAKINSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAE
                     NLKNAGANLVGEVSTDGYTFESSDAVIDGKFVGLALDNDNQEDQTEARIDAWVEQIKA
                     HFA"
     gene            1505..2383
                     /locus_tag="ACJE1S_000371"
     CDS             1505..2383
                     /locus_tag="ACJE1S_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HGG0805944.1"
                     /translation="MGRTNQSSFCLIFKNIGFLCRYCIVFLILTIPLFSKPDQKITPI
                     IEKAKDYFFIEKDLKLTHYHTSYRIFVAKSKIKYKKYKVIYLLDGNAFFSRFLNLYNY
                     LPKEDILIVGIGYDSPLAFDTTHRTKDYTPKVQGLEFQNGGGSFEFRQFIKTELLPYI
                     NTHYETSEDFQILFGHSFGGLFALDTLFNDTKLFSHYFIISPSLWWGGSEFIPKRISL
                     SNCPQIYMALGSAESNSSIKKAKAKISVKELGMQILNHSACEVEFKLFENETHGSVIE
                     KAMIWAIENIKSEPID"
     gene            complement(2388..4049)
                     /locus_tag="ACJE1S_000372"
     CDS             complement(2388..4049)
                     /locus_tag="ACJE1S_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HGG0805945.1"
                     /translation="MKDFVFIQNENLIPLPDEINIWENCKDEEVLISNEKAQKAQIYA
                     PEINFYLKSSQDEILEKSKNILKLYEARANVYDLGLDLEQNKEVKNRIILVDSDDTMA
                     DFLKKQNFKIISLKNEEILAVFGSIGELCAVILNQGEEVEIDFDILLFNTNSNDIRKD
                     FTRQSGCYNISNFKNQESLLKFLQDKSPKYTYKTYITYDSSVCQYHERRSEHCAKCAE
                     ICPTIAILKNDENKHLEFSQVDCLGCGGCISVCPSGSLDYASMPRESFFELCEFYKEK
                     KILIIPKKMSLENLNIKLPKDVLPFMIEGEKWLSSMHFLTLLQSSGANLVFYTDFISR
                     GSAEAIDLLNTFFERKFQKEAIFTAKDEKELQNALGKQEFIENLSFDFHNNTLTTREN
                     FAKRMQNLIQNDDFGVKESGEWLRYGKIEINANTCTLCLSCVGACNVGALIADTKENA
                     LKFNASLCTTCGYCEVSCAEKDTLKLTRSGMEFNPNYFEYQTMAKDELFACIECGKEF
                     ATKKAVEKIANLMKPKFGNDESKIKTLYCCADCKAKVMIEAMRKG"
     gene            4119..5441
                     /gene="selA"
                     /locus_tag="ACJE1S_000373"
     CDS             4119..5441
                     /gene="selA"
                     /locus_tag="ACJE1S_000373"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HGG0805946.1"
                     /translation="MNKFRTFPQIGSLIDDESLKEYPFYLRSYFCKSVVAKLKANISE
                     DLLDKNTILEKIQQEIQKHLRKDLQSVINATGVVIHTNLGRSVIDESIFEKSKDVLCN
                     YANIEFDLESGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLHSLCFDKELVT
                     SRGELVEIGGSFRVSEVIKAAGVKLCEVGTSNKTHLKDYEKAINENTKMLLKTHKSNF
                     ALIGFHSEVGIKDLGNLAKEKGLLSYYDLGSGWCENLNPKLIKNEPKIKDLIKHCDIL
                     SFSGDKLFGSVQAGIILGKKELIDKIKENQLLRMLRVDKITLALLNESLKIYLEKDYE
                     KITSLKLLNDEIAHIKEKALRVQNEIQIKSELKMSKSLVGGGSMPDKTLETYVLAFNG
                     NALKLQEKFRAKNIIGRIENEAFVLDFRTIREKDLSKLIQIINTMENL"
     gene            5438..7237
                     /gene="selB"
                     /locus_tag="ACJE1S_000374"
     CDS             5438..7237
                     /gene="selB"
                     /locus_tag="ACJE1S_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HGG0805947.1"
                     /translation="MNSLLIGTAGHIDHGKTSLIKAINGFEGDSLKEEKERQITINLS
                     FSNLNYKQKHLSFIDVPGHKDLVKTMISGAFGFSACLFVVDINEGLKEQSIEHLEVLE
                     LLGVKDIILVLSKCDLCENPKEQEQKILNSLEFIPMKVFHTSIKDQESIERLKNYLLN
                     LECKNANANLVFRYYIDRVFSLKGIGTIVTGSLNEGKISLNEKIICLDNQKELVVKNI
                     QNHESNFAEISAFNRVALSLNCDYKELKKGYVLSKKGFFKGFKECDVLIKAKRLKNEK
                     MLFCVGAKSIECKISILKELENNEFFAHLEFEKNLFLCFNEKFILLQNNRVVGGGEVL
                     NPVSEPLKKEQKNKFLMLLKNKELKKAFEFLKNTHKYGFGLLSSYQRFKLSHEEALNL
                     AKELNGVFIDEKNLNIYNLLALDELKKFISFILEKNPYAMLSASSLALRLPWASAEFC
                     EFGLQNLSNLLEFEKGVYFKKGINYEKLREKNNDELYNILKKQGIKPQAPYNLYEFLE
                     LDRKSGDEILKKLTKQNRVIRLSHNLFIEKNALDKLMQECLEILKSQSLDIQSMKERF
                     NLSRKYAIAYLEYLDKDERVQKKDEKRFLKTNI"
     gene            7286..7996
                     /locus_tag="ACJE1S_000375"
     CDS             7286..7996
                     /locus_tag="ACJE1S_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HGG0805948.1"
                     /translation="MKKISLILACSMSLFAASNSEISDFYSKSIKAQFPNATVSVGNR
                     QKVGNTGFESVIVTITLEGQKQEQILFTKDNLIVPDIIDLKTKTSYAQEYEMKKFQEA
                     RANFTKNVKPVVQKETMLIALGDKSKPAIYVFSDPECPYCRDHLAQIKDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKESKKAKSDDEKIAILNKYYDANIKSYPKVSDSELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            8041..8523
                     /locus_tag="ACJE1S_000376"
     CDS             8041..8523
                     /locus_tag="ACJE1S_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805949.1"
                     /translation="MSACAKPAFVQSSIQTSNEGIFLKAKQGQSFSITLQNPSKIQST
                     LKDELALRLKNLGLKEVSLNADYEILINLVDFKKHSYAQRITSSGRFFYDFDPFENNG
                     EWYIENYYTMQVNIQIGSKNTLQKTSLFTRTAYLSDKKRCQLSLENKIIDQISSFFYF
                     "
     gene            complement(8525..9820)
                     /locus_tag="ACJE1S_000377"
     CDS             complement(8525..9820)
                     /locus_tag="ACJE1S_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0805950.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSFYALELQGANEFLVGLL
                     VGVYALTQMALQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSWADNIYTMLIGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAIMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAVLSLLCIILLYTVVPKENKLTHENTKTPFFHLIKQKNLALMNFTNFMQKMLMSIA
                     FLSIPIILVKHLGFDEHKLWIVYTASMIAGFIAMGFSGSLGEKRGLAKQILLLGIAFF
                     ILSYIFFVFSSTITFFIVAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLNKLELLAIILVILSIVWFIALLYLKNPSEFKNIYLPLETTL
                     NLSEFGKNLGVVDIYKNSKNLVIKFDSKLTNKEELESKI"
     gene            9962..10417
                     /locus_tag="ACJE1S_000378"
     CDS             9962..10417
                     /locus_tag="ACJE1S_000378"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HGG0805951.1"
                     /translation="MNRFQTFSLAMEGKVNIELLAAYKDKIETLSDETLFRFWYLELK
                     NPIIGLILGVVPAFILSGLTFDRFYKGDMGLGFAKMAMWAFIFIGLLIAGFFDSSSML
                     VVWIFNIVALFIWNILDFFLVWQGIKNDNLAKIIQFLEQDNENFISNKQ"
     gene            10389..10997
                     /gene="rdgB"
                     /locus_tag="ACJE1S_000379"
     CDS             10389..10997
                     /gene="rdgB"
                     /locus_tag="ACJE1S_000379"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HGG0805952.1"
                     /translation="MKILLATSNKHKVIELKELLKEFEIYAFDEILTAFEIEENGNSF
                     KENALIKARAVFNALDENQKNEFIVLSDDSGICVDVLGGKPGIYSARFSGKGDDKSNR
                     DELVKQMRVLGFEKSKVHYVAAIALVSLEGEWTMHGTMHGHVINTERGENGFGYDSLF
                     IPKGFDKTLAELSHNEKNQLSHRFKALELTRIVLKVLNKGKG"
     gene            complement(11031..13493)
                     /locus_tag="ACJE1S_000380"
     CDS             complement(11031..13493)
                     /locus_tag="ACJE1S_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HGG0805953.1"
                     /translation="MFAKFLKIFIYHPKSTFFATLFICLFLSFFASKLSVDASAESLL
                     LEDDKDLKIFRELSKHYKSDNFLLLAFKPEDENPFSGKNLNKLKELHQELEQVSLVKR
                     VFSIINAPLLQSSENTDLKELLKNIPNIQSKDINLTKAQNEILNSPFYKNNIISKDGK
                     TTGLIIYLKPDTIYNELIEKRDLSTDENKKEQIRLAIKKHQEQQKIITKQGLDTIKNI
                     IKKYEKNEDRFYLGGVSMIADDMITYIKSDLMLYGISLVFLLACALYCFFRAWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVIHLITHFIEISKLYPK
                     AKIERLVLQTLLAKANPSFYAIITTMIGFFSLMLSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKLKKYYKKEFKFNFLAFCAKTSLDPKKRSIIYILSITTIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLDIIIRFPDNKNNPSLNDVFDSFE
                     SEFDALATKDTYWFNSQKTRIAKKVHEFLENKEFIGSVLSLNSLLSLGKNINDGKDLD
                     DFTLAFLNENLPPELKQELLSPFVNIEENELRFSIRIIDSDPKLRRNEFLTNLKQELE
                     TLLKNDGVEIQITGIMLLYNNMLQSLFSSQFDTLVFVILVIFVLFIIIFRSLKFSIIA
                     LLVNIIPLSMVFALMGILGIPLDMMSITIAAIAIGIGVDDTIHYIYRFKEEIKTKSVE
                     EAILASHLSIGSALYYTTIGIVLGFSVMMSSNFIPTIYFGVLTVFVMILLLSGSLFLL
                     PSLLVTIYTKKTKALNPHKAHK"
     gene            complement(13493..14062)
                     /locus_tag="ACJE1S_000381"
     CDS             complement(13493..14062)
                     /locus_tag="ACJE1S_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0805954.1"
                     /translation="MKKIFLILALSLNIFALQLDEISNTMQKNINKSLQLLQNNKEDK
                     KQAADGIFLIFDHIIDYKLMAQLSLSKDYAKLNPKEQEKFASAFEASLKKSFTDKLDL
                     YKDQVLMVKNGELKNAKRYFLTSSMIVDGEEKNIIFKFYNNNNDWLIYDIDVLGVSIV
                     QTYRSQFGDILANQDFDTLLQKLENITIE"
     gene            complement(14072..14770)
                     /locus_tag="ACJE1S_000382"
     CDS             complement(14072..14770)
                     /locus_tag="ACJE1S_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HGG0805955.1"
                     /translation="MKLKLISCILLFSTIFAFANELDLNDFEEEYQSYKVNDPLYGYN
                     KAMTSFNVALYDYSLRPILKGYNAITPEFIRTGVRNFFDNLFAPLRFVGNVLQFKFEE
                     AGEEFKRFSANTIMGFGGIMDPASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYASPTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYYNTPNLYPF
                     IRDAYEQRRNELSK"
     gene            complement(14811..15254)
                     /locus_tag="ACJE1S_000383"
     CDS             complement(14811..15254)
                     /locus_tag="ACJE1S_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HGG0805956.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKEDFNPDALLAIARGGMSLGHSLA
                     VALQTRKLFALNSIHYDDTKKLDTIEIFNIPDLSKYKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKVATIFYKKTALLEPEFKVKEAKEWVEFYWDIHID"
     gene            complement(15270..16589)
                     /locus_tag="ACJE1S_000384"
     CDS             complement(15270..16589)
                     /locus_tag="ACJE1S_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HGG0805957.1"
                     /translation="MDFFKLKENGTNIRTEVVAGLTTFLAMVYIIPVNSSIVSNTGMP
                     IEALITATALITIVATAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQKIPWQSALGAV
                     FISSIIFLILSFTPFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGIITPNKDTLV
                     SIGNFKNPHVLFGIFTLILIVFFWAIKLRGAFILGVLISSIIAWIFGIDNASFPKQIL
                     SLPNFSSDNGLGAIFLELDIKSALNITMIPIILTFFITQLFDSIGTITGIGERGKIFD
                     DAKDGEKKLGKTLMADATGSALGALGGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLISLGNFLLIALQ"
     gene            complement(16599..17663)
                     /gene="mqnE"
                     /locus_tag="ACJE1S_000385"
     CDS             complement(16599..17663)
                     /gene="mqnE"
                     /locus_tag="ACJE1S_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HGG0805958.1"
                     /translation="MKNLLEKLENEERLNENEANALWDLDLFTLAKFAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMSHEEIMKIVDDTITRGTKEVH
                     IVSAHNKDTSWQWYLEIFKMIKEKYPQMHIKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEIRKKICHGKVSSENWLKIHKLWHDKGRQSNATMLFGHIEER
                     HHRIDHMLRLRALQDESGGFNAFIPLVWQRDNSYIQTDKIMDSEEILKTIAISRLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTNLKTFIEMI
                     KTANLTPVERDSLYNELKTY"
     gene            17806..20154
                     /locus_tag="ACJE1S_000386"
     CDS             17806..20154
                     /locus_tag="ACJE1S_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HGG0805959.1"
                     /translation="MLNKELELFKKNLNTYAQNYRKFFLKQGSFSLYHSKNMDNFLKK
                     TYDIVLKECFENFLPTSDNIPFCVLASKGYAKNNLCANESVSLIFVYKDIKAYHLKPM
                     IKAFIEILNDVHLQIDYVVLELNGLYNASNELKTTIIGARFICGSKILFKSVKEKFDS
                     ILHANKNEFAQILLANFKDFNLPFIKQEFNIKKDFGGLDHLRALESLLTLFKNSPKNY
                     ALNFMDEKNVSELRLAADFLLSLKSAINLQSNKDQDEFLFSNIHEIAELMYRKGKKNL
                     DAEKILVQKALQSMHTIGFYTHFLAYKIQNELQNIAQKQYRFKNLAEALTFLLGLKDQ
                     DIAFDLDLVFALKNLSYEKKDLEKALALFEKIFYKRHSFCILKLLLDSGILKELCKPF
                     GMVRFLSDEEGDYSFDEQAFLLLKEFEKYEDELESLKNLNTDEKMILKLVILLSAINN
                     ENEISLASIYRAYCIKFNLKNDVFELGLRIFKNHNALKELAEKEDVYNPIIICALLSK
                     VENLKTLKLLHTLTWLKAKALNRNPFFYKVIDRILENAKQGFDDENLLDETARRVKKE
                     LTLKRTKLFLEQNAILQDKITHIKSNLFIIKNTFEDIVEIARFAKENDFKFWFSNSTN
                     LSLQIVAFKDFKIEIVLTALANLNLVFMNLFELFDDKIYLRFEYDNIITDEQKNKLCE
                     LLNSNLSGFSSRKIKKPIIKKDELKLDLNYSKIYAKLSLNTKDQQGLMAYMMNIFNEL
                     GLVLSAAKIQTIRQRTRNTFIFQKNENLEKNEEKLLISLISE"
     gene            20158..21954
                     /gene="glmS"
                     /locus_tag="ACJE1S_000387"
     CDS             20158..21954
                     /gene="glmS"
                     /locus_tag="ACJE1S_000387"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HGG0805960.1"
                     /translation="MCGIVGYIGKNEKKHTILSGLKELEYRGYDSAGLAVMKNGELDF
                     FKAVGKLENLANKCANFTSEEFGFAIGHTRWATHGKPNEINAHPHLGQYSCVIHNGII
                     ENYKEIKNKLEDQGVSFLSQTDTEVIVQLFEFYAEKMEVFEAWKKTIEELRGAFATLL
                     VSKKDPTRVFFAKNAAPLIVGKSQNNEFYFASADTPLIGLCDEVIYLEDLSLGYANEK
                     ELVIYENNQLKQNSFTKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRINGDEV
                     VFDELENEDLSTVDEITLCACGTSYHAAMASAYLFERLARVKAKVEIASEFRYREAII
                     KPNSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFIAQKKKIDMSAQIKALLHTPNCVAVSAKLHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKTLLYEKTKSNVEELIARDSTVLCVSPLDFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            22089..23480
                     /gene="fumC"
                     /locus_tag="ACJE1S_000388"
     CDS             22089..23480
                     /gene="fumC"
                     /locus_tag="ACJE1S_000388"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HGG0805961.1"
                     /translation="MEYRIEHDTMGEIKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKSAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFEGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSEKVSEELSKLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELNIPENEPGSSIMPGKVNPTQCEAITM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NREKIEYNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVSEEDFA
                     KFVDPAKMIGPKA"
     gene            complement(23527..24570)
                     /locus_tag="ACJE1S_000389"
     CDS             complement(23527..24570)
                     /locus_tag="ACJE1S_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HGG0805962.1"
                     /translation="MQTGKIFLICFILVVLSLLLYLFKGFLLVIIIASLMAVATSNAN
                     AKFLSLTNGRKFLASMLTTACMVLLFFAPFVYAMIELAKALKNFDINLVTQTLNYVKN
                     YQFTLPESLSFLEPKIKEFLASIDLNSISKQILNYASSFTKSGAKFLIDMVLICIFYF
                     FANLYGTELVIYIKSVIPIDKQELDDILSEVGNVMAVVLYSMIIIAILQGALFSIIAM
                     FYGYDAILMGVIFAVSSLIPALGGALVYIPISLYEFASSGLGSALVIFIYSVVVISFI
                     ADTLVKPLIIKWINEKLVKTPAKINELLIFLAMIAGISTFGFWGIILGPAILTFFIST
                     IRLYMILKDKNLI"
     gene            complement(24580..25590)
                     /gene="ruvB"
                     /locus_tag="ACJE1S_000390"
     CDS             complement(24580..25590)
                     /gene="ruvB"
                     /locus_tag="ACJE1S_000390"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HGG0805963.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQENIKKNLNVFISA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDVLFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDEELAIILQKAALKLNKSCENEAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEETITKERAKEALNSLGVNELGFDAMDLRYLELLTEAKRKP
                     IGLSSIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASTKSFSVLKLNYEQTLFD
                     EN"
     gene            25681..26091
                     /locus_tag="ACJE1S_000391"
     CDS             25681..26091
                     /locus_tag="ACJE1S_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HGG0805964.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            26092..26450
                     /gene="ssrA"
                     /locus_tag="ACJE1S_000392"
     tmRNA           26092..26450
                     /gene="ssrA"
                     /locus_tag="ACJE1S_000392"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            26657..28912
                     /gene="capC"
                     /locus_tag="ACJE1S_000393"
     CDS             26657..28912
                     /gene="capC"
                     /locus_tag="ACJE1S_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin CapC"
                     /protein_id="HGG0805965.1"
                     /translation="MKKNASSKILLSLGVATLLYSGAFAAEITFNSDSDLNTHFDINE
                     KDNVATFKNENYKNQDLTFKINTLAFDDAHEDAKINIDLGNNSLTLENTRNSGGETAA
                     LVRNFNVDAKDFKTTDIGLSYFNAGIINANFTMVGSGEDFDLDNIDKNKASSLLIFNG
                     SRENTNDTVNGSLTVNGDFSATNSAIVSMKSDTFKVNGTATIEKSGLGFLSQSYSNLD
                     VNDFIALRAKDIKTDKLNDETNAGALILKSASSYIDESLLNDDDYVASLDVTAEDNKY
                     GGVFVDYKLSLKNCGGDKCLVINGGATAAAKKLTNQIAVDLEAITRIIDGLDNEQAKE
                     ALQEQKTELEQLKQEAEKNGGKIDDEKYIDLVNKNSNLNLSANDKASILALRSITEQL
                     GSIGADLASREGVKLALDIKKDTDNTGKSVSNLNSASSAVNTTMNISNDVSIGSRVAM
                     LNNPFGTYASKMNGLKFAALDSDMRPSYVNEYTNSVWANAFGGANIIDGDSGAMYGAT
                     VGVDKQANDDVLWGAYFTYANAKIKDNNLEQKSDNFQLGMYSTINVAPQWELNLKAYA
                     QVSPTKQDNVQIDGAYNSDYTSKFLGLSANAGRVFDFSDNTLFIKPFAGVNYYFSYTP
                     SHTENGAIAKDIDSMKNNSVSVEVGAEFRKYMNENSYIFVTPKIEQFVINSGDDYTAN
                     LAVNNAFFTSIEANNKKKTYGQIIVGGNVDFTNQLSMNLGFGAKQILAGKVDNKNETY
                     LSGQVGLKYKF"
     gene            complement(29054..31138)
                     /locus_tag="ACJE1S_000394"
     CDS             complement(29054..31138)
                     /locus_tag="ACJE1S_000394"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HGG0805966.1"
                     /translation="MQTNPNMFLNRELSWLRFNSRVLDQCSRPLPLLERLKFVAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNISSSDEMSPLQQLKAIRKYLHKEKDLLEHYFNEIIS
                     DLEKENLFIKNYENLDNNLKQKCDEYFFSTIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKTHPELIKFGMIRIPRVLPRFYEVSANVYVPIESIVEKHTEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKGADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAIDKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGIQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQIIRKKGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKVEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKILE
                     MIALEASKGSEGVIIAKMNSLVDSDIIKALYEASIKGTQIDLIVRGICCLKPNEEFSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNLLAYELQNDGEYAKVASNEKVIDSQQILEEYVSKIYKTLKKDADQSR
                     ATHLASKLFKEN"
     gene            31321..31812
                     /gene="nrfH"
                     /locus_tag="ACJE1S_000395"
     CDS             31321..31812
                     /gene="nrfH"
                     /locus_tag="ACJE1S_000395"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HGG0805967.1"
                     /translation="MKKSLNLFGIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNN
                     CHIMNEVYNEYMAGPHAQKVKGEARATCVDCHLPHGFLAKWIAKAESGLNHAYAFTFK
                     LDELPTNLSATEKSRNMIQDNCVRCHADFAQTAINATTNPHADKSLKCASCHQDVGHK
                     HGI"
     gene            31828..33660
                     /locus_tag="ACJE1S_000396"
     CDS             31828..33660
                     /locus_tag="ACJE1S_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HGG0805968.1"
                     /translation="MKKNFLRLAIVVLVLLIVGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDNPNFERWGKVFPEQLKMYLTVEEEEPKATEFGGNLSYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLKAFKGQPAACMNCHSGWTPW
                     LINNIAKGDFVAFNSTNYWTMIKNVPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVARGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIADDSSKKWWDGTQKNYDEYEFWRDGNQPKEIEANGIMLTFPWNEWKKDQPFRI
                     EMLDDYYDKVRNVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCADCHMPYV
                     REGAKKISQHNITSPLRDINSACKTCHKQSEDYLRAQVRDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQTDGKADASKISEELKEVLELHRKSQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMAKTGQIKLIEIANANGINDFKTSNLGFEDMQKFNPGELYYKV
                     DVNGHKAGERYYGDEIEVNGNPPKELLEHDKNLAPYNYQVIDKK"
     gene            complement(34174..34264)
                     /locus_tag="ACJE1S_000397"
     tRNA            complement(34174..34264)
                     /locus_tag="ACJE1S_000397"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34228..34230),aa:Ser,seq:gct)
     gene            complement(34332..34964)
                     /locus_tag="ACJE1S_000398"
     CDS             complement(34332..34964)
                     /locus_tag="ACJE1S_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805969.1"
                     /translation="MINKNKLFRQIHIYVSLFFLPCAVLFALTGIAYILGADQDTGLK
                     VETYKLVKNIEPGKEKDALIQYLQENNLKVPSDAEATQGKGKGANMGGIHHNANAAPA
                     NVKAGKGKNNEITIGGAHYSANITPVAQNEYVITLKTRSLLGDMIMLHKDKGAWYFSV
                     LSIGFGIALFLLYISGLIITLFASKKDRQKQLATLGAGVVITILLAYLSL"
     gene            complement(35130..36119)
                     /locus_tag="ACJE1S_000399"
     CDS             complement(35130..36119)
                     /locus_tag="ACJE1S_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG0805970.1"
                     /translation="MKKSLVFAFFAFFLSLILTACDSKSNENNASTAIKTSTTVKVIP
                     ISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFHALRLNDKVAGVPAKNLPK
                     YLQQFKDKPSIGGVQQVDFEAINALKPDLIIISGRQSKFYEKLKEIAPTMFVGLDNAN
                     FLSSFENNVLSVAKLYGLEKEASEKIADIKNEIEQAKSIVDEDKKALIVLTNSNKISA
                     FGPQSRFGIIHDVLGINAVDENVKVGTHGKSINSEFILEKNPDYLFVVDRNIIVGNKE
                     RAQGILDNALVTKTNAATNNKIIYLDPEYWYLASGNGLESLKTMILEVTNAIK"
     gene            complement(36134..36889)
                     /locus_tag="ACJE1S_000400"
     CDS             complement(36134..36889)
                     /locus_tag="ACJE1S_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0805971.1"
                     /translation="MIRLQNITKCYDQKAIISDLSIDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPDSGRIYIDGMNLTLYKEQDLAQKISILKQQNHINLRLKVEELVAFGRFP
                     HSQGRINLNDKMKIDEALEYMGLNTLRNEFLDSLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKNGKLLKQG
                     LKDEIIQEDVLRQIYDMDIPVSQIDGKKICIYF"
     gene            complement(36886..37824)
                     /locus_tag="ACJE1S_000401"
     CDS             complement(36886..37824)
                     /locus_tag="ACJE1S_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HGG0805972.1"
                     /translation="MRKKILILAFLTLIMALVFVFAGLKDFDEYALKNRFLQIAAIVI
                     VAICIAISTVIFQTLCNNKILTPAIIGLDSLYMLLQSALVFSLGSANLSVYRNDINFL
                     ITLACMVVFSLGLYKILFSSDKSIYLIMLLGLIFGTLFSTLSSFFEILIDPDEFMIIQ
                     GRMFASFDNVAFDVLALAYIVTLLSFIWIFRYMKFLDPLSLGKDLSINLGINYQKISK
                     HLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLLACILISILALLGG
                     VFFVSRIFDYNTTISVIINFLGGIYFIYLVLKGNKL"
     gene            complement(37817..>38752)
                     /locus_tag="ACJE1S_000402"
     CDS             complement(37817..>38752)
                     /locus_tag="ACJE1S_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0805973.1"
                     /translation="LLILLVVFGIISLFIGVIRINLDDIFSLSTTQLEIILLTRIPRL
                     IAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIFFTGASFFTQTI
                     IASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIINAITTFFAYALNYIQNIQG
                     WLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIAGMGEDLALNLGVSYNTILFLG
                     LIIVSIITSVVIVSIGVIPFLGLIIPNLVAIYRGDNLKKNLIYIALCGALFLLICDII
                     SRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKTYA"
BASE COUNT        13614 a         5584 c         6443 g        13111 t
ORIGIN      
        1 aataatttaa aataaaaatc acaaaggaga gcttatgtca gttttggtta ttggtgcaga
       61 tgaaataaca cctattaagg ctgttttgta tgatttaggt gcaaaaaaaa tagagcattg
      121 ggatgcgcgc aatgaaaata gagtcaatcg caaacctatt ccttgtgata cagaatgtat
      181 agtaatgctt acgagtttct taaatcacaa tactatgaaa aaaattaaaa acgaggctaa
      241 aaaacgaaaa attccattag tttgcgcaaa aagaagcgta agttgcgtgt attgtgagta
      301 ttgtaagata tttaatttag ataaagaatt ttcttgctct aaggttgaat aatgctattt
      361 ggatttgatg ataaaagaga atttatccct cgggtttata gttctttgtg caagcaagag
      421 cttgtcaaaa cttttttgat tcaatacaat gctagtattg atagtgcttt aagaatcccg
      481 ctttcatatg caaaaagtgc aaaggattta aaaatgcctt ttcaaaactt cttgcaagat
      541 gtgatacata cgccttttgg caagataaaa aatatcgata aaaatcttac tttgaacatt
      601 tcttattttc aaaaaagaaa gagtttgatt tttaagacta agatatttca aaatgtcgat
      661 attttaaggc ttttaagagc ttattttaga ggaatttgtt ttgatgcgca agttttattt
      721 gatttttatg tatatgataa aatttctcat caaaatcaaa atcgaagcat tgttcaaaat
      781 gataatttga ttatcataga taataaaatt gccgttttac ctctttgcaa ggaagtggat
      841 cttcaaaatt taaatatcga taacgaaatt caaaaaatat ctaaatttat atatcaaaat
      901 caatttgaac aaatctacat agtttgtccg cgtaacaaaa aattcacaca ttttattcaa
      961 ataaaacatt ttttatgcga tttaaataaa actatgttaa aattagttcc gtattcaata
     1021 acaaataaac ttataaggag aaaataatgt cagtagcagt aatttatgga agtgctatgg
     1081 gaaatacaga aggagcagca aatacaatcg cttcaaaatt aggaattagt gatgttttaa
     1141 atgttgcaga tattgatgca gctaaaatta attcttatga taaattaatt tgtggaactt
     1201 ctacttgggg aagtggtgat ttacaagatg attgggatgg ttttgatttt tcaggtctta
     1261 gccttggtgg aaaaactgta gctgtatttg gaatgggtga tagtgaaagc tattcagaca
     1321 ctttctgcgg cggtatggga aaacttgcag aaaatttaaa aaatgcaggc gcaaatttag
     1381 taggtgaagt ttcaactgat ggctatacat ttgaatcaag cgatgcagtt attgatggaa
     1441 aatttgtagg tcttgcactt gataatgaca atcaagaaga tcaaactgaa gcaagaattg
     1501 acgcttgggt agaacaaatc aaagctcatt ttgcttaatt tttaaaaata tcggctttct
     1561 ttgccgatat tgtattgtat ttttaatttt aactattcca cttttttcaa aaccagatca
     1621 aaaaattact cctattatag aaaaagcaaa agattacttt tttatagaga aagatttaaa
     1681 attaacgcat tatcatacaa gttatcgaat ttttgtggca aaaagtaaaa taaaatataa
     1741 aaaatataag gtaatttatt tgcttgatgg caatgcgttt ttttcgagat ttttaaatct
     1801 ttataattat ttgcctaaag aagatatttt aattgttggt ataggttatg atagcccttt
     1861 ggcgtttgat actacccata ggacaaaaga ttatactcct aaggttcaag gtttggaatt
     1921 tcaaaatgga ggaggtagct ttgaatttag acaatttatc aaaacagagc ttttacctta
     1981 tattaataca cattatgaaa ccagtgaaga ttttcaaatt ctttttggac attcttttgg
     2041 cggacttttt gctttagata ctttatttaa tgatacaaag ctttttagcc attattttat
     2101 tatttcacct tctttgtggt ggggtggtag tgaatttata cctaaacgaa tttctttatc
     2161 aaattgtcct caaatttata tggctttagg ttcggctgag agtaattcta gcattaagaa
     2221 agctaaagct aaaataagtg ttaaagaact tggtatgcaa attttaaatc atagtgcttg
     2281 tgaagttgaa tttaaacttt ttgagaatga aactcatggg agtgtaatag aaaaggctat
     2341 gatttgggct atagaaaata tcaaatcaga gccaattgat tgattattta tccttttctc
     2401 attgcttcta tcattacctt tgctttgcag tctgcacaac aataaagggt ttttatcttg
     2461 ctctcatcat tgccaaattt aggcttcatc aaattcgcaa ttttttctac cgctttttta
     2521 gtggcaaact cttttccaca ctctatgcaa gcaaaaagtt catcttttgc catggtttgg
     2581 tattcaaaat agttgggatt aaattccatt ccactacgcg taagttttag agtatctttt
     2641 tcagcacaac ttacttcgca gtatccacag gtggtgcata atgaagcatt gaatttaagt
     2701 gcattttctt tagtatcagc aatcaaagct cctacattac aggctcctac gcaagaaagg
     2761 cagagagtac aggtatttgc attgatttct atttttccat atcttaacca ttcgccactt
     2821 tcttttacgc caaaatcatc attttggatc aaattttgca ttcttttggc aaaattttct
     2881 ctagtagtaa gagtgttatt gtgaaaatca aaacttaaat tttctataaa ttcttgcttt
     2941 cctaaagcat tttgcaattc tttttcatct ttagcggtaa aaatagcttc tttttgaaat
     3001 tttctttcaa aaaaagtatt taaaagatct attgcttcag cacttcctcg tgaaataaaa
     3061 tccgtgtaaa aaaccaaatt tgcaccactg ctttgcaaaa gagttagaaa atgcatagaa
     3121 gaaagccact tttcaccttc tatcataaaa ggcaaaacat ctttgggtag ctttatattt
     3181 aaattttcta aagacatttt tttaggtatg attaaaatct ttttttcttt ataaaattca
     3241 caaagttcaa aaaaactttc cctaggcatg gatgcataat caagcgaacc actagggcac
     3301 acgctgatac agcctccaca gcctaggcaa tctacttgag aaaattctaa atgcttgttt
     3361 tcatcatttt ttaaaatagc tatcgtaggg caaatttcag cacactttgc gcaatgctca
     3421 ctgcgtcttt cgtggtattg acatacgcta gaatcatagg taatataggt tttgtatgtg
     3481 tattttgggc ttttatcttg taaaaatttc agtaaacttt cttgattttt aaaattgcta
     3541 atattataac agccactttg tcttgtaaaa tccttgcgaa tgtcgttaga atttgtatta
     3601 aaaagtaaaa tatcaaaatc aatttctact tcttctcctt gatttaaaat cacagcacaa
     3661 agctcgccta tgctgccaaa tactgctaga atttcttcat tttttaagct tatgatttta
     3721 aagttttgtt tttttaaaaa atcagccata gtatcatcag aatctactaa aataatgcgg
     3781 ttttttactt ctttgttttg ttctaaatca agccctaaat catagacatt tgccctagct
     3841 tcataaagtt ttaatatatt tttacttttt tctaaaattt catcttgtga acttttaaga
     3901 taaaaattga tttctggagc ataaatttgt gctttttgtg ctttttcatt agaaattaaa
     3961 acttcttcat ctttgcaatt ttcccaaata tttatctcat cgggcaaggg aataagattt
     4021 tcattttgta tgaaaacaaa gtctttcatt gattttcctt gatggtcaat ttgccaaatt
     4081 ctatggtaaa ataaccaaat attttcttaa ggcttaagat gaacaaattt agaacttttc
     4141 cacaaattgg aagcttgatt gatgatgaga gtttaaaaga atatcctttt tatttaagat
     4201 cttatttttg caaaagtgtt gtcgctaaac tcaaggcgaa tataagcgaa gatttgctag
     4261 ataaaaatac tattttagaa aaaatacagc aagaaattca aaaacattta cgcaaagatt
     4321 tacaaagtgt cattaatgct acgggtgtgg ttattcatac aaatttgggg cgtagtgtta
     4381 ttgatgagag tatttttgaa aagtccaaag atgtgctttg taattatgct aatatcgaat
     4441 ttgacttaga aagcggtaaa agaggaagtc gttatgcctt ggtgcttgaa aaacttaaaa
     4501 tgctttttga atgcgaagat gctttggttg taaataataa cgccgcagca gtttttttgg
     4561 tacttcattc tctttgtttt gacaaagaac ttgtaacttc aaggggtgag cttgttgaaa
     4621 ttggcggaag ttttcgtgtg agtgaagtga ttaaagctgc aggagtaaag ctttgtgaag
     4681 taggtacgag caataaaacg catttaaaag attatgaaaa agctataaac gaaaatacta
     4741 aaatgctttt aaaaacccat aaatctaatt ttgctttgat tggttttcat agcgaggttg
     4801 gcatcaagga tttaggaaat ttggctaaag aaaaaggact tttgagttat tatgatttag
     4861 gttcgggttg gtgtgagaat ttaaatccaa aactaataaa aaatgagcct aaaatcaaag
     4921 atttgataaa gcattgcgat attttgagct ttagtgggga taagcttttt ggtagtgtgc
     4981 aagctggaat tatactgggt aaaaaagaat tgattgataa aattaaagaa aatcaactgc
     5041 taagaatgct aagagtagat aaaatcacac ttgctttgtt aaatgaaagt cttaagattt
     5101 atcttgaaaa agattatgaa aaaatcacaa gtttaaagct tttaaatgat gaaatcgctc
     5161 atattaaaga aaaagcttta agggtacaaa atgaaattca gattaaaagt gaattgaaaa
     5221 tgagtaaaag tttggtaggg ggtggttcta tgcctgataa aactttagaa acttatgttt
     5281 tagcttttaa tggcaatgct ttaaaactgc aagaaaaatt tagagcaaaa aatatcatag
     5341 gtcgcataga aaatgaagct tttgtgctgg attttaggac aattagagaa aaagatttat
     5401 caaaattaat tcaaattatc aataccatgg aaaatttatg aattcgctat taattggtac
     5461 tgcagggcat attgatcatg gaaaaacttc tttgattaaa gctataaatg gttttgaagg
     5521 agatagttta aaagaggaaa aagaaagaca aattaccatt aatttaagtt tttctaattt
     5581 aaactataag caaaaacacc tttcttttat tgatgtgcca ggtcataaag acttggttaa
     5641 aacgatgata agcggggctt ttggttttag tgcttgtttg tttgtagttg atatcaatga
     5701 gggcttaaaa gaacaaagta tagagcattt agaagtactt gaacttttag gtgtcaaaga
     5761 tattatcttg gtgcttagca aatgcgattt atgtgaaaat cctaaggaac aagagcaaaa
     5821 aattctaaac tcacttgagt ttatacctat gaaagtgttt cacacttcga taaaggatca
     5881 agagagcatt gagcgcttaa aaaattatct tttaaattta gaatgtaaga atgctaatgc
     5941 aaatcttgtt tttcgttatt atatcgatag ggttttttct ttaaaaggta taggaactat
     6001 agttactgga agccttaatg agggcaaaat ttccctcaat gaaaaaatca tttgtcttga
     6061 caatcaaaaa gaacttgtgg ttaaaaatat acaaaatcat gaaagtaatt ttgctgaaat
     6121 ttcagctttt aaccgtgtgg ctttgagctt aaattgtgat tataaagaat taaaaaaagg
     6181 ttatgtttta agtaaaaaag gtttttttaa gggctttaaa gaatgtgatg ttttgattaa
     6241 agctaaaaga ttaaaaaatg aaaaaatgct tttttgcgtg ggtgcaaaaa gcatagagtg
     6301 caagataagc attttaaaag agttagaaaa taatgaattt tttgctcatc ttgaatttga
     6361 aaaaaatctt tttttatgtt ttaatgaaaa atttatttta ttgcaaaata atcgtgttgt
     6421 gggcggagga gaggttttaa atcctgtgag tgagcctttg aaaaaggagc aaaaaaacaa
     6481 atttttaatg cttttgaaaa ataaagaatt aaaaaaagct ttcgaatttc taaaaaatac
     6541 gcataaatat ggctttggct tgctttcaag ttatcaaaga tttaagttaa gtcatgaaga
     6601 agctttgaat ttagccaaag aattaaatgg agtttttata gatgaaaaaa atcttaatat
     6661 ttataatctc ttagccttag atgagcttaa aaaattcatt tcttttatac ttgaaaaaaa
     6721 tccttatgcc atgctttcag caagctcttt agctctaaga cttccttggg ctagtgcgga
     6781 attttgtgaa tttggacttc aaaatctatc aaatttactt gaatttgaaa agggagtgta
     6841 ttttaaaaaa ggaattaatt atgaaaagct tagggaaaaa aacaacgatg agctatacaa
     6901 tatacttaaa aaacaaggca taaaacctca agcaccttat aatttatacg aatttttaga
     6961 attagacaga aaaagtggag atgaaatttt aaaaaaactt accaagcaaa atcgcgttat
     7021 aagactttct cataatcttt ttatagaaaa aaatgcctta gataagctta tgcaagagtg
     7081 cttagaaatt ttaaagagtc aaagccttga tatacaaagt atgaaagagc gttttaatct
     7141 ttcaagaaaa tatgccatag cttatttaga atatcttgat aaagatgaga gggtgcaaaa
     7201 aaaggatgaa aaaagatttt taaaaacaaa tatttagaat atcattataa aataaaatct
     7261 taatatttga ttttaaggaa aataaatgaa aaaaataagc ttaatccttg cttgctcaat
     7321 gtctttattt gctgctagca attctgaaat cagtgatttt tattccaaaa gcattaaagc
     7381 acaatttcca aatgcaacag tgagtgtagg taatcgccaa aaggttggaa atacaggttt
     7441 tgaaagcgta attgttacga taacgcttga aggacaaaag caagagcaaa ttctttttac
     7501 aaaagataat cttatcgttc ctgatattat tgatttaaaa actaaaactt cttatgctca
     7561 agaatatgaa atgaaaaaat tccaagaggc tagagcaaat ttcactaaaa atgttaaacc
     7621 tgtagttcaa aaagaaacaa tgcttatagc tttaggcgat aaaagcaaac ccgctattta
     7681 tgtattttca gatccagaat gtccttattg tagagatcat ttggcacaga ttaaagatga
     7741 gcttaaaaat tatcaagtca attatatctt aaccccagtg catggtaaat cagcttttga
     7801 aaaatcagca ttgatttaca aagagagtaa aaaagctaag agtgatgatg agaaaatagc
     7861 tattttaaat aaatattatg acgcaaatat caaatcttat ccaaaggtga gcgatagcga
     7921 gttaaaagaa gtattttctc tttatgaaaa atatcgttct ttaggcctta gtgctactcc
     7981 aaccatcatc aaataatgag aaaaattcgt ctaatttcag ttttatttct agcactcttt
     8041 ttgagtgctt gcgcaaagcc tgcctttgtt caaagctcta tacaaacaag caatgaaggc
     8101 atttttttaa aggctaaaca agggcaaagt tttagtatca ctttgcaaaa tccaagcaaa
     8161 attcaaagta ctctaaaaga tgaattagct ttaagactta aaaatttagg attaaaagaa
     8221 gtatctttga atgccgatta tgaaatttta atcaatcttg tagattttaa aaagcattcc
     8281 tacgctcaaa gaattacaag ttcgggaaga tttttttatg attttgatcc ttttgaaaat
     8341 aatggggaat ggtatattga aaattattat accatgcaag taaatataca aattggctct
     8401 aaaaatactc tgcaaaaaac gagtttgttt actcgcacag cttatcttag tgataaaaag
     8461 cgttgtcagc tttccttaga aaataaaatt atagatcaaa tttcaagttt tttttatttt
     8521 tgatttaaat tttactttct aattcttctt tatttgttag cttgctatca aatttaatga
     8581 ctagattttt tgagtttttg tatatatcta caacgcctaa atttttacca aattcgctca
     8641 aatttaaagt cgtttctaaa ggcaaataaa tatttttaaa ttcagaagga ttttttaaat
     8701 ataacaaagc tataaaccaa acaatagaca aaatcactaa aataatagcc agtaattcta
     8761 atttattaag atgtaaaaat atacctccta ttatacctcc tataaaactt ccaccatatc
     8821 caaaagcatt aaaaagtcct aaagctgcgc ctttttcatg tactttacaa aatttagaag
     8881 cacagctttg cataatgggc tcgtgcaagt taaaacctat aaaaaatatc acaaccgcaa
     8941 cgataaagaa agtaattgtg ctagaaaaaa caaaaaagat ataagaaagg ataaaaaaag
     9001 ctatccctaa aagtaaaatt tgctttgcta agcctctttt ttcgcctaaa cttcctgaaa
     9061 atcccatggc gataaagcct gctatcatag atgctgtata aacaatccaa agtttatgtt
     9121 catcaaagcc taaatgtttt actaaaatga taggaatgct taaaaatgct atactcataa
     9181 gcattttttg catgaaatta gtaaaattca ttagggctaa atttttttgt ttaataagat
     9241 gaaaaaaagg agttttggta ttttcatggg tgagtttatt ttcttttgga acgacggtat
     9301 aaagcaagat aatacacaaa agcgataaaa cagcactaag atcaaaaaga ctagaaagcc
     9361 cccatttagc actcattaaa ggcgagatta ccatagaagc tgcaaaagat agtcctataa
     9421 aagatcccat tattgccata gctttaccgc gattttcttc agtgataaaa tcactaatca
     9481 ttgctgtagc tactgcacca atagcccctg caccttgaag cattctgcct attagcattg
     9541 tataaatatt atcagcccaa gagcagatta aagagcctat gataaagata atcagtccta
     9601 taagcatggt ttttttgcgt ccaattttat cacttagtat tccaaaaggc atttgtaaag
     9661 ccatttgagt tagagcataa acacccacta gaagtcctac taaaaattca tttgcaccct
     9721 ggagttcaag agcataaaag ctaagcacag gcaaaactat aaaaagtcca aaaaatcttg
     9781 ttccaacgat aaaagatagg ggtaagacat tatttagcat tatttggttt cctaaaaatc
     9841 ttaaatttta caaaaaaaga taattttact atgaattata ttaaggattg ttaagttttt
     9901 tattttatct ttttaaaagg cttaaaaaag taagatttta attttttaaa aggatgggtt
     9961 tatgaatcgt tttcaaactt tttctttggc aatggaaggt aaagtaaata tagagctgct
    10021 ggcagcttat aaagataaaa ttgaaacttt aagcgatgaa acattgtttc gtttttggta
    10081 tttagaattg aaaaatccta ttatagggct tattttaggc gtagtacctg cttttatttt
    10141 atcagggctt acttttgatc gtttttataa aggggatatg gggcttggtt ttgcaaaaat
    10201 ggcaatgtgg gcttttattt ttataggttt acttattgca ggtttttttg attcatcttc
    10261 tatgcttgta gtatggattt ttaatatcgt cgctcttttt atatggaata tacttgattt
    10321 tttcttagtt tggcaaggga ttaaaaatga taatttagcg aaaataattc aatttttgga
    10381 gcaagataat gaaaatttta ttagcaacaa gcaataaaca caaagttata gaattaaaag
    10441 aacttttaaa agaatttgaa atttatgcct ttgatgaaat tttaaccgcc tttgaaatag
    10501 aagaaaatgg caatagtttt aaagaaaatg ctcttataaa agcaagagcg gtttttaatg
    10561 ctttggatga aaatcaaaaa aatgaattta ttgttttaag cgatgatagc ggaatttgtg
    10621 tcgatgtttt gggcggtaag ccaggaattt attctgcgcg ttttagtggt aagggagatg
    10681 ataaaagcaa tcgtgatgag cttgtaaaac aaatgagagt tttgggtttt gaaaaaagta
    10741 aggttcatta tgtagctgct atcgctttgg taagcttaga gggtgaatgg acaatgcatg
    10801 gaactatgca cggacatgta attaacacag aaagaggtga aaatggcttt ggctatgata
    10861 gcctttttat ccctaaaggc tttgataaaa ctttagcaga acttagccat aatgaaaaaa
    10921 accaactttc gcatcgtttt aaagctttgg aacttacaag gattgtttta aaagttttaa
    10981 ataaaggaaa agggtgagaa attttatcaa gtatatttta gtggttgtat ttatttatgt
    11041 gctttatgcg ggtttaaagc tttggttttc ttagtataaa ttgtaaccaa aagacttgga
    11101 agcaaaaata agcttccact taaaagtaaa atcatcacaa atacagttaa aactccaaaa
    11161 taaatcgtag gaataaaatt actactcatc ataacgctaa aacctaaaac tataccaatg
    11221 gttgtataat aaagtgccga tcctatgcta agatgtgaag ctaaaatcgc ttcttctacg
    11281 cttttggttt ttatttcttc tttaaaacga tagatataat gtatggtatc atccacgcct
    11341 atacctatgg ctatagcagc tatggtaata ctcatcatat ctaaaggtat gcctaaaatt
    11401 cccataaggg caaaaaccat acttaaagga atgatattaa ccagtagggc aataattgaa
    11461 aatttcaagc ttctaaaaat aatgataaac aatacaaaga taactaagat aacaaaaaca
    11521 agtgtatcaa attgtgatga aaaaagactt tgaagcatat tattataaag tagcataatg
    11581 cctgtgattt gaatttccac accatcattt tttaaaagtg tttcgagctc ttgcttgaga
    11641 tttgttagaa attcattacg ccttagtttt ggatcagaat ctataatgcg tatgctaaat
    11701 cttaactcat tttcttctat attaacaaag ggtgaaagaa gttcttgctt aagttctggg
    11761 ggtaaatttt cgtttaaaaa cgcaagagta aaatcatcta aatccttgcc atcattgata
    11821 ttttttccta gacttaaaag gctattaaga cttaaaaccg aacctatgaa ttctttattt
    11881 tctaaaaatt catgcacctt ttttgcaata cgcgtttttt gagaattgaa ccaataagta
    11941 tcctttgttg ctagagcatc aaattcgctt tcaaagctat caaatacatc atttaaacta
    12001 gggttgtttt tattatcagg aaaacgaatg ataatatcca aaggcagggt tccgcctaaa
    12061 tttttatcaa taaccaataa gccttttttg atttcacttc catctttaaa ataatttaca
    12121 aaagaatttt caactcttag tttagaaatt cctattagag ccaagataat agtagtaata
    12181 gagagtatgt atataataga gcgtttttta ggatctaggc ttgttttagc acaaaaagct
    12241 aagaaattaa atttaaattc ttttttgtag tattttttga gtttaagaag cactaaaata
    12301 cttgctaaaa ataaatagct aaaaataagt gcaagtccta tacctatact catcataata
    12361 ccaagtttta tgataggctc tatatttgaa agcatgaggg agaaaaagcc tatcatggtt
    12421 gtaatgatgg cataaaaact aggatttgct tttgcaagta gggtttgaag tacaaggcgt
    12481 tcgattttag cttttggata aagcttgcta atttctataa aatgtgtgat gaggtgaatg
    12541 actacgctta gagtgatgat taagaccaaa gcaacatagt ttgaagaaat aaccgtgatt
    12601 tgaaaattta aaagagcaaa aacgccactt gccgcactta aacttataaa acaaataaag
    12661 agaggtaaaa atacaaaacg ccacgcacga aaaaagcaat aaagtgcaca tgctaataaa
    12721 aacacaagag aaattccata gagcatgaga tcagatttta tataagttat catatcatca
    12781 gcaatcatac tcaccccgcc aagatagaat ctatcctcat ttttttcata ttttttgatg
    12841 atatttttga ttgtatctaa gccttgtttt gtaatgattt tttgttgttc ttggtgtttt
    12901 ttaattgcta agcgaatttg ctctttttta ttctcatctg tgctaagatc gcgtttttct
    12961 atgagttcat tatagattgt atcgggttta agatagatga taagtcctgt tgttttgcca
    13021 tcttttgaaa tgatattgtt tttataaaaa ggactgttta aaatttcatt ttgagctttg
    13081 gtgaggttaa tatccttgct ttgtatattg ggaatatttt ttaaaagttc ttttaagtct
    13141 gtattttctg aactttggag caaaggagca ttgataatgc taaaaacacg cttgactaat
    13201 gaaacttgtt ctaattcttg atgaagctct tttaatttgt ttaaattttt acctgaaaaa
    13261 gggttttcat cttcaggttt aaaagctaaa agtaaaaaat tatcactttt ataatgttta
    13321 gaaagttctc taaaaatttt taaatcttta tcatcctcta aaagcaagct ttcagcactt
    13381 gcatctacgc ttaatttaga agcgaaaaag cttaaaaata agcatataaa aagagtagca
    13441 aaaaaagtac tttttggatg ataaataaaa atttttaaga atttcgcaaa cattattcta
    13501 tggttatatt ctcaagtttc tgaagtagag tatcaaaatc ttggtttgct aaaatatccc
    13561 caaattgaga tctataggtt tgaactatac taacacccaa aacatcgata tcgtagataa
    13621 gccaatcatt attattgtta taaaatttaa agatgatatt tttttcttcc ccatctacta
    13681 tcatcgaaga ggttaaaaaa tatcgttttg cgttttttaa ttctccattt tttaccatta
    13741 aaacttgatc tttataaaga tcgagtttat ctgtaaagct ttttttaagg cttgcctcaa
    13801 aagcactagc aaatttttct tgttctttag ggtttaattt agcataatct ttagaaaggc
    13861 tcagttgagc catgagttta taatcaatta tatgatcaaa aattagaaaa attccatcag
    13921 cagcttgttt tttatcttct ttgttgtttt gtagaagttg tagactttta ttgatatttt
    13981 tttgcatggt attagaaatt tcatctaatt gtaaggcaaa aatatttaaa gataaagcta
    14041 gaattaaaaa tatttttttc atttttttcc tttatttact aagttcattg cgtctttgct
    14101 cgtaagcatc gcgtataaac ggatataagt taggagtgtt ataataaatc tcatcaatct
    14161 catcaagtct aaagctaagt tcatttccaa agccataggc gcttatggct atgcttgccc
    14221 aagtgggatc gatataagct gttgggcttg cataccaagt tgcaggtagg gttaatgtat
    14281 ctcttaaatt gctaggtcca agtatgggca aaacgatatg aaaaccgctt cccactcccc
    14341 aatgcgctaa aacagttcct aaatcagcag ggtgtttttt aagtcccatt ttacttgcag
    14401 gatccataat cccaccaaaa cccataatgg tattagcact aaatctttta aattcttctc
    14461 ctgcttcttc aaatttaaat tgcaagacat tgcctacaaa gcgtaggggt gcaaataaat
    14521 tatcaaaaaa atttcttacg cccgtgcgaa taaattcagg agtgatagca ttgtagcctt
    14581 taagaatagg acgaaggcta taatcataca aagctacatt aaagcttgtc attgctttat
    14641 tgtacccata aagtgggtca tttactttat agctttgata ctcttcttca aaatcattta
    14701 aatcaagctc atttgcaaaa gcaaagattg tgctaaagag taaaatacag gatattaatt
    14761 ttaatttcaa ataaaactcc taagattaaa agccgttatt atagcagatt ctaatcaata
    14821 tgaatatccc agtaaaattc aacccattct ttagcttctt ttaccttaaa ttcgggttct
    14881 aaaagtgcag tttttttata aaaaatcgta gcaactttaa gttctatatg tggaaatttt
    14941 tcaagtaaaa cctttttaat ttcagccaaa ctttccccac tatctacaat atcatcaatg
    15001 agtagaattt ttttgtactt gctaagatca ggaatattaa aaatctcaat agtatcaagt
    15061 ttttttgtat catcatagtg gatagaattt agagcaaaaa gcttgcgtgt ttgaagagca
    15121 actgctaaag aatgtcctaa actcattcct cctcttgcta tggctaaaag tgcatcagga
    15181 ttaaaatctt ctttgatttc tttagccaaa atttttacat cttctttaaa ttcttcataa
    15241 gaataaaaaa tcatttttgt cccctttttt tattgcaaag caatgagtaa gaaatttcct
    15301 aaggaaatta agcttaaaac tataatacca agattaatct tatcccattc tctcttaaaa
    15361 attcgaacca ataaataaga aagaaaacca aaggcaaaac ctgtggtaat cgaataagta
    15421 aaaggcatca taatgatagt aaaaaagcta gctactgcaa tagcactgtc tttaaagtct
    15481 atatttttaa cttccataaa cattaaaatt cctaccatta caagtacagg atatatagca
    15541 tttgcgggaa tagctttaaa aagtgggagc aaaaaaagtg tgaaagcaaa gcaaatagcc
    15601 acaactaaag cggtaagtcc tgttctacct ccactttcaa cccctgttgt actttctaca
    15661 aaagcagtta cagtcgaagt tccgcctagt gcacctagag ctgaacctgt agcatctgcc
    15721 ataagggttt tacctagttt tttctctcca tcttttgcat catcaaaaat tttacccctc
    15781 tcgcctatac ccgtgatagt gcctatgcta tcaaaaagtt gagtgataaa aaaagtaagg
    15841 ataataggta tcatagtgat atttaaagca cttttgatat caagttctaa aaaaatagct
    15901 cctaagccat tgtcactact aaaattaggt aaagaaagga tttgcttagg aaaacttgca
    15961 ttatcaatcc caaaaatcca agctataata gagcttatta aaactcctaa aataaaagcc
    16021 cctcttagtt ttatagccca aaaaaataca attaaaatga gggtaaaaat tccaaaaagc
    16081 acatggggat ttttaaaatt tcctatgctg actaaagtat ctttatttgg cgttataatg
    16141 cccatttgac ttaagcctaa aaaagcgata aagcatccaa tccctgcgca aatggctaag
    16201 cgcaaatctt taggtatatt gcgtataacc caaaggcgaa agggggtaaa agaaaggatt
    16261 agaaaaataa tacttgagat aaagactgcc cctaaggcac tttgccatgg tattttttgt
    16321 cctaagcaaa ctgcaaaagt aaaataagca ttcaaaccca ttccaacact catggctact
    16381 ggagtattag caaaaaaggc attaaaagca gttgcaacaa tagtaattaa agcagttgca
    16441 gtaattaaag cttctatcgg catgcctgta ttgcttacta tgcttgaatt tacaggaatg
    16501 atataaacca tggctaaaaa agttgttaat cctgctacaa cttcggttcg aatattggta
    16561 ccattttctt tgagtttaaa aaaatccatt tttaatcctt agtaggtttt tagttcatta
    16621 tataaactat cgcgctctac aggagttaaa tttgctgttt ttatcatttc tataaaggtt
    16681 tttagattgg tacccttagc agattttgct cctcctgcac tttgtatact ttctttttct
    16741 atagtgccat ctaagtcatt tgcgccaaat tcttgcgcaa ccatggctaa atttaaagtc
    16801 atagtcgccc aataagcttt aatgtttttg atattatcaa gtactaagcg agaaatagct
    16861 atggttttta aaatttcttc actatccatt atcttatctg tttgtatata gctattatct
    16921 ctttgccaaa ccaaaggaat aaatgcgtta aaacctccac tttcatcttg caaagcacga
    16981 agtcttaaca tatggtctat cctatggtgt ctttcttcga tatgtccaaa aagcatagta
    17041 gcattgcttt gtctgccttt atcatgccaa agtttgtgaa ttttgagcca attttcactg
    17101 cttacttttc catggcagat ttttttgcgt atttcttcat caaaaatttc tgctccaccc
    17161 ccaggcatag aatccacgcc gtattcaagc attttttcta tcacttcttc atagctcatt
    17221 ttaaaacggc gatgcaaaaa gtcaatttct gccgctgtca tagcttttat atgcatttga
    17281 gggtattttt ccttaatcat tttaaaaatt tctaaatacc actgccaact tgtgtcttta
    17341 ttgtgtgctg aaacaatatg cacttcttta gtgccacgag ttatagtatc atcaactatt
    17401 ttcataattt cttcatgact cataagataa ggatttggat tttttcggtg tgctgaaaaa
    17461 gcacaaaatt tacatgtatc tgcacaaata tttgtaggat ttatatggcg atttatatta
    17521 aaatacacct tttttccatg aagcttagtg cgttttttgt gtgcgaattt agctaaggta
    17581 aaaagatcta aatcccatag agcatttgct tcattttcat ttaatctttc ttcattttct
    17641 agtttttcaa gtagattttt cattgatttt cacttctata aatttttaga atttttgaaa
    17701 aaacattata aattttgctt actgaaaaag agtttatagc aaagccaaaa taaaagatat
    17761 ttttgttaaa atcttataaa tgaaatttta aaagagagta aagatttgtt aaataaagaa
    17821 ttagaacttt ttaagaaaaa tctcaatacc tatgcgcaaa actatagaaa atttttttta
    17881 aaacaaggat catttagtct gtatcattct aaaaatatgg ataatttttt aaaaaaaact
    17941 tatgatatag tattaaagga atgttttgaa aattttttgc ctacaagcga taatataccc
    18001 ttttgtgttt tggcaagcaa aggatatgca aaaaataatc tttgtgcaaa tgaaagcgtt
    18061 tctttgattt ttgtttataa ggatattaaa gcttatcatt taaaacctat gattaaagct
    18121 tttatagaga tattaaatga tgtgcatttg caaattgatt atgtggtttt agaactaaat
    18181 ggactttata atgctagcaa tgagcttaaa acaaccataa taggtgctcg ctttatatgt
    18241 ggatctaaaa ttttatttaa atcagtcaag gaaaaatttg acagcatact ccatgcaaat
    18301 aaaaatgaat ttgctcaaat tttacttgct aattttaaag attttaacct tccttttatc
    18361 aagcaagaat tcaacataaa aaaagatttt gggggcttag atcacttacg agctttagaa
    18421 agcttgttaa ctctttttaa aaattcccct aaaaattatg ctttaaattt tatggatgaa
    18481 aaaaatgtaa gcgagttgcg cttagcggcg gattttttat tgtccttaaa atctgctata
    18541 aatttgcaaa gcaataaaga tcaagacgaa tttttattta gcaatattca cgagattgca
    18601 gaattgatgt atagaaaggg caagaaaaat ttagatgctg aaaaaatctt agtgcaaaaa
    18661 gccttgcaaa gtatgcatac tataggtttt tatacccatt ttttagctta taaaattcaa
    18721 aatgaattac aaaatattgc acaaaaacaa taccgattta aaaatttagc agaagcatta
    18781 acttttttgt tgggtttgaa agatcaagat attgcttttg atttagattt ggtttttgct
    18841 cttaaaaatt taagttatga aaaaaaggat ttagagaaag ctttagctct ttttgaaaaa
    18901 atattttata aaagacatag tttttgtatt ttaaaacttt tacttgatag tggaatttta
    18961 aaagaattat gcaagccttt tggtatggtg cgttttttaa gcgatgagga gggggattat
    19021 agttttgatg agcaagcatt tttgctttta aaagaatttg aaaaatacga agatgaactt
    19081 gagagtttga aaaatttaaa tacagatgag aaaatgattt taaaattagt catactttta
    19141 agcgcaatta acaatgaaaa tgaaatttct ttagcgagta tatatagggc ttattgtatt
    19201 aaatttaatc taaaaaatga tgtttttgaa cttgggctta ggatttttaa aaatcacaat
    19261 gctttaaaag agcttgccga aaaagaagac gtttataatc ctatcattat atgtgctttg
    19321 ctttctaagg ttgaaaattt aaaaacctta aagcttttac atactcttac ttggcttaaa
    19381 gcaaaagctt taaatcgtaa tccatttttt tataaggtta tagatagaat tttagaaaat
    19441 gctaaacaag gttttgatga tgaaaattta cttgatgaaa ccgcaaggcg tgtaaaaaaa
    19501 gaattaacac tcaaaagaac aaagcttttc ttggagcaaa atgctatttt acaagataag
    19561 atcactcata taaaatccaa tctttttatc atcaaaaata cttttgaaga tattgttgaa
    19621 attgcacgat ttgcaaagga aaatgatttt aaattttggt ttagcaatag tacaaattta
    19681 agtcttcaaa tcgttgcttt taaggatttt aaaatagaaa ttgttttgac cgctttagca
    19741 aatttaaatt tagtttttat gaatttattt gagttatttg atgataaaat ttatttaaga
    19801 tttgagtatg ataatatcat tacagatgag caaaaaaaca aactttgcga gcttttaaat
    19861 tcaaatttaa gtggtttttc ttcaagaaag atcaaaaagc caatcattaa aaaagatgag
    19921 ttaaaattgg atttaaatta ttctaaaatc tatgcaaaac ttagtttaaa tactaaagat
    19981 caacaaggtt tgatggcata tatgatgaat atttttaacg agttaggttt ggttttatct
    20041 gcagcaaaaa ttcaaaccat acgccaaaga acgcgtaata cctttatttt tcaaaaaaat
    20101 gaaaatttgg agaaaaatga agaaaaattg ttaatttctt taataagtga gtaaatcatg
    20161 tgtggaattg taggttatat aggaaaaaat gaaaaaaaac ataccatttt aagtgggctt
    20221 aaagagcttg aatatcgcgg ttatgatagt gcgggtttag cagtgatgaa aaatggagag
    20281 cttgattttt tcaaagctgt aggtaagctt gaaaatttgg ccaataaatg tgcaaatttt
    20341 acaagtgagg aatttggttt tgctataggt catacacgct gggcaaccca tggaaaacct
    20401 aatgaaatca atgcacatcc tcatttgggt cagtattctt gtgtgattca taatggtatt
    20461 atagaaaatt ataaagagat taaaaacaag cttgaagacc aaggagtgag ttttctaagc
    20521 caaacagata cagaggttat agttcaactt tttgaatttt atgcagaaaa aatggaagtt
    20581 ttcgaggctt ggaaaaaaac aatagaagaa cttagaggtg cttttgccac acttttagtg
    20641 agtaaaaaag atcctactcg tgtatttttt gctaaaaatg ccgctccttt aattgtagga
    20701 aaatctcaaa ataatgaatt ttattttgca agtgctgata cgcctttgat agggctttgc
    20761 gatgaggtaa tttatcttga ggatttaagc ttaggctatg ctaatgaaaa ggaacttgtt
    20821 atttatgaaa ataatcaatt aaaacaaaat tcctttacca agctttcagg cgataaagct
    20881 tatgcaaaaa aagatggttt tcgctttttt atggaaaaag aaatttatga gcaaagtcgc
    20941 gtaatgagcg aggttttgat ggggcgcatt aatggtgatg aggtggtttt tgatgagctt
    21001 gaaaatgagg atttaagtac agttgatgaa atcacacttt gtgcttgtgg aactagctat
    21061 catgctgcta tggcaagcgc gtatttgttt gagcgtttgg ctagggttaa ggctaaggta
    21121 gaaattgcta gtgaatttcg ctacagagaa gccattatta agcctaattc tttatttatc
    21181 gtaatttctc aaagcggaga aaccgcagat actttagaag ccttaaaaat tgcaaaagag
    21241 caaggagcta aaacatttgc tatttgtaat gtggataatt ccaatatagt ccgtttggca
    21301 cacttaagtc ttctaacgcg cgcaggcatt gaaaaaggtg tagcttcaac caaggctttt
    21361 gcaactcaag ttttaacact ttggatgttg gcaattttta ttgctcaaaa gaaaaaaatt
    21421 gatatgagtg cccaaatcaa agctctttta catactccta attgcgttgc ggtaagtgct
    21481 aaattacatg aaaaaattca tcgtttatct aagcgttact tagacggcca tggatttttc
    21541 tttataggta gagatgtgtt ctatcctttg gctttagagg gagctttaaa attaaaagaa
    21601 ctctcttatt tgcatgctga aggttatcct gcaggagaaa tgaagcacgg acctatagct
    21661 ttggctgatt ctaagcttta tactatagct ttaatgccta aaaccctact ttatgaaaaa
    21721 accaaatcaa atgttgagga attgatagct agggattcta ctgttctttg cgtttctcct
    21781 ttggattttg atttaagtga tgattttata aaaaccaacg agcaagatca ttatatgtgt
    21841 gaattttttg aaatgatggt gatcactcaa cttctagcga tggaaatttc tataagactt
    21901 ggcaatgatg tagatatgcc aagaaattta gcaaaaagtg taaccgttga ataaaccccg
    21961 tgcagttata aaactgcaca taaactctca taaattccaa aaaaataaat aaattttaaa
    22021 ttataagcta attttatgct tatttttgtt taaataattg cataacaatt ttctagaaag
    22081 gaaacctaat ggaatataga attgaacatg ataccatggg cgaaattaaa gttccaaatg
    22141 acaaatattg gggtgctcaa acagagagaa gttttgaaaa tttcaaaatt ggttgcgaaa
    22201 agatgccaaa ggtgctaatc tatgcttttg caaatcttaa aaagtccttg gctttggtaa
    22261 ataataaact tggcaagcta gatgatgcta aaaaaagtgc tatagttcaa gcttgtgatg
    22321 agattatcgc aggtaaattt gatgataatt tcccacttgc aatttggcaa acaggatcag
    22381 gcacacaaag caatatgaat atgaatgaag tgattgcaaa tcgtgcaact gaaatcatgg
    22441 gcggagattt tcgtaaagaa aaacttgtac atccaaatga tcatgtaaat atgtctcaaa
    22501 gttctaatga tactttccca actgctatga gtatagttgc agtagaacaa gtggagaaaa
    22561 agcttattcc tgcacttgat gagcttattg ctacttttga aaaaaaggta aaagaatttg
    22621 aaggaattat caaaatagga cgcacgcatt tacaagatgc tacaccgctt actttagcgc
    22681 aagaattcag cggttatctt tctatgcttt tacattcaaa agagcaaatt atcgcttctt
    22741 taccaacctt aagagaattg gcaataggcg gaacagcggt gggaacagga cttaatgctc
    22801 atccagaact cagtgaaaaa gtgagcgaag aacttagtaa gcttataggt acaaaatttg
    22861 tttcaagtcc aaataaattc catgctttaa caagccatga tgctattaat tttactcatg
    22921 gagctatgaa aggcttggct gcaaatttaa tgaaaatagc aaatgatatc agatggttag
    22981 cttcgggtcc tagatgcgga cttggtgagc ttaatatccc tgagaatgaa ccaggaagtt
    23041 ctatcatgcc aggtaaggtt aatcctacac aatgtgaagc tattactatg gttgcggttc
    23101 aagtgatggg aaatgatgcg gctataggtt ttgctgcaag tcaaggaaat tttgaactta
    23161 atgtatttaa acctgtgatt atctataatt tcttacaaag tcttgattta cttgctgatt
    23221 ctatgcattc atttaatatt cattgtgctg taggtataga gccaaatcgt gaaaaaatag
    23281 aatacaatct acacaattct ttaatgctag tgactgcatt aaacccacac attggatatg
    23341 aaaatgctgc taaggtagct aaaaatgcac ataaaaaagg tatttcttta aaagaaagtg
    23401 ctatggagtt aggtttggtt agcgaagaag actttgctaa attcgttgat cctgctaaaa
    23461 tgataggacc aaaagcttaa atctagtttg atgtttctct cttacgcgag agaaacattt
    23521 tttattttaa attaaattct tatcttttaa aatcatataa agtcttattg ttgaaataaa
    23581 aaaagttaaa attgcaggtc ctaaaataat accccaaaaa ccaaaagttg aaattccagc
    23641 tatcatggct aagaaaatca aaagttcatt gattttagcg ggtgttttta cgagtttttc
    23701 attaatccat ttaatgatta aaggcttaac tagggtatca gcgataaaag agataacaac
    23761 aacagaataa ataaaaataa caagtgcaga accaagaccg cttgaagcaa attcataaag
    23821 acttataggg atatacacca aagctccacc caaagctggt atgagagagc ttacagcaaa
    23881 aattacaccc attaagatgg catcatatcc ataaaacata gcaatgatgc taaaaagtgc
    23941 tccttgaagt atggcgataa tgatcataga ataaagcacc acggccataa cattacccac
    24001 ttcgcttaaa atatcatcaa gttcttgttt gtcgatagga atgacagatt ttatatagat
    24061 tactaattct gttccatata gattagcaaa aaaataaaat atacagatta acaccatatc
    24121 tataagaaat ttagctcctg attttgtaaa acttgaagca taatttaaaa tttgtttaga
    24181 aatgctattt aagtctatag aagctagaaa ttctttgatt ttaggttcta aaaagctaag
    24241 gctttcgggt agggtaaatt gataattttt aacataattg agcgtttgtg tgacaagatt
    24301 gatatcaaaa ttctttaaag ccttagctag ctcgatcatc gcatagacaa agggagcgaa
    24361 gaaaagtaaa accatacatg cagttgttag catagaggct aaaaatttac gcccatttgt
    24421 taggcttaaa aatttagcat ttgcatttga ggtagcaact gccattaaac ttgcaatgat
    24481 aataacaagt aaaaaaccct taaaaagata aagtaaaagg gataaaacca ctaaaataaa
    24541 acagataaga aaaatttttc cagtttgcat ttttttcctt caattttcat caaataaagt
    24601 ttgttcgtaa ttaagcttaa gtacactaaa actttttgta cttgctatac gacctttggc
    24661 agtgcgttct atgtagccat ttgcaagcaa ataaggttcg attacatctt caatagtatt
    24721 ttcatcttca ctcaaagctg ccgctatact agaaagtcct ataggctttc ttttagcctc
    24781 tgttaaaagc tctagatatc ttaaatccat cgcatcaaaa ccaagctcat tgacacctaa
    24841 agaatttaat gcttctttag ccctttcttt ggtgatcgtt tcttcgtcat ttacatctgc
    24901 aaaatctctc actcttttta aaagtctaag tgcgattcta ggggtagagc gacttctttt
    24961 ggcaatctca agtgcagctt cattttcaca gcttttattg agctttagtg cagctttttg
    25021 aagtatgata gcaagctctt catctttata aaattcaagt ctaaattgca ttccaaaacg
    25081 atctcttaaa ggattgctaa gcattcctgc acgggttgta gcgccaataa gtgtaaattt
    25141 aggcaaatcg atttttatgg tttgagcagc tggaccacta ccgatgatga tatctagcct
    25201 ataatcttcc attgcagggt aaagtacttc ttcaatagca gggcttaagc gatgaatttc
    25261 atcgataaaa agcacatctc cttcgcttaa attggttaaa attgcagcca aatccccgct
    25321 tttttctatc ataggagccg cagttgtttt gatatttgca cccatctcat aagaaataat
    25381 attagctaat gtagttttgc caagtcctgc aggcccacta aaaagtatat ggtctaagca
    25441 ttcatttctt ttttttgcag cgctaataaa aacatttaaa ttttttttaa tgttttcttg
    25501 tcctatgtag ccatcgaaat ttgaaggacg cagagaagtt tcataagttt cgtcaaaaga
    25561 atatttttct atttctacta ttctatccat atctttgctt atattttgga aaaattaaaa
    25621 taagatttta gctaaaattt gctagaattt acattaaact ttaatgatta tggtttaaaa
    25681 atgggaattt taacaaaatt agaattagat tatgaaattg acgatataga aaaattttta
    25741 caatttttta gaaccatgtg cgataggttt gaacctttaa tcatcaagct tggaagcgat
    25801 agcgtgcgtt ataaagaagc cataaaagag cttgaaactt tagcacacaa tactgcttgg
    25861 gcagcaagac gcttaaatct tgaagaagtg actgattttt gtgtattttg tgaagagatg
    25921 atggcgcaag caaatcgctt taatgggcct gctagtgatg aatttacgga ttggatgctt
    25981 ttgatgagtg atcaatttga aaaatattgt cgttcgtatg aaaatgatga ttctgtttta
    26041 gcggttttta atcctttaat tgttaatgtt ccaaatatta tttctaaata agggagcgac
    26101 ttggcttcga caggagtaag tctgcttaga tggcatgtcg ctttgggcaa agcgtaaaaa
    26161 gcccaaataa aattaaacgc aaacaacgtt aaattcgctc ctgcttacgc taaagctgcg
    26221 taagttcagt tgagcctgaa atttaagtca tactatctag cttaattttc ggtcattttt
    26281 gatagtgtag ccttgcgttt gacaagcgtt gaggtgaaat aaagtcttag ccttgctttt
    26341 gagttttgga agatgagcga agtagggtga agtagtcatc tttgctaagc atgtagaggt
    26401 ctttgtggga ttatttttgg acaggggttc gattcccctc gcttccacca tcacgctaat
    26461 tttaagtaaa tcataagttt atttcaaatt tttagaattt tttatatgaa gttaagaatg
    26521 atttattacc cttaaaattt tgatatattg ggttttataa tttttcatta aaaatttata
    26581 gttttatttt taagcttatt tttaaggggg ggggtataat tattccttca gtttaaattt
    26641 attgaaggag aaacttatga agaaaaatgc ttcgagcaag atattgctaa gcttaggtgt
    26701 agcaactttg ctttattcag gtgcttttgc agcagagatt acttttaaca gtgatagtga
    26761 tttaaataca cactttgaca ttaatgaaaa agacaatgtt gctactttta aaaatgaaaa
    26821 ttacaaaaat caagatctaa cttttaaaat taatacttta gcctttgatg atgcccatga
    26881 agatgctaaa atcaacattg atttaggtaa taattcttta actttagaaa atactagaaa
    26941 tagtggtggc gaaactgctg ctttagtaag aaatttcaat gtagatgcga aagattttaa
    27001 aactactgat ataggactta gttattttaa tgcaggaatt attaatgcta attttacaat
    27061 ggtaggctca ggtgaagatt ttgatcttga taatatagat aaaaataaag cctcatcttt
    27121 gttaattttt aatggtagta gagaaaatac taacgatact gtaaatggta gcttaactgt
    27181 aaatggggat tttagcgcaa caaatagtgc tattgtttca atgaaaagcg atacttttaa
    27241 agtcaatgga acagcaacga ttgaaaaatc aggtcttgga tttttatctc aatcttattc
    27301 gaatttagat gtaaatgatt ttattgcttt aagagcaaaa gacataaaaa cagataagct
    27361 taatgatgaa actaacgcag gagctttgat tttaaaaagt gcaagttctt atatagatga
    27421 aagcttgctt aatgacgatg attatgttgc ttctcttgat gttacagctg aagataataa
    27481 gtatggcggt gtctttgtgg attataaact cagccttaaa aactgcggtg gtgataaatg
    27541 cttagtgatc aatggaggtg ctactgcagc ggctaaaaaa ttaactaatc aaatcgcagt
    27601 agatcttgaa gctatcacta gaatcataga tggtttagat aatgagcaag ccaaagaagc
    27661 cctacaagaa caaaaaactg aacttgaaca actcaaacaa gaagctgaga aaaatggcgg
    27721 taaaatcgat gatgaaaaat acattgattt agtaaataaa aattcaaatt taaatcttag
    27781 tgctaatgat aaagcttcta tcctagcact tcgttctatt acagaacaat taggaagtat
    27841 aggagcagat ttagcaagta gagaaggtgt aaaactagct ttagatatca aaaaagacac
    27901 agacaacaca ggtaaatctg tatctaatct caattcagct tctagtgcag taaataccac
    27961 tatgaatatt tctaatgatg tttctatagg ttctcgtgta gcaatgctaa acaatccttt
    28021 tggaacttat gcttctaaaa tgaatggtct taaatttgct gctttagata gtgatatgag
    28081 accaagctat gtaaatgaat ataccaatag tgtttgggct aatgcttttg gtggtgctaa
    28141 tattatcgat ggagatagtg gtgcaatgta tggtgctacc gtgggagtag ataaacaagc
    28201 taatgatgat gttttatggg gtgcttattt tacttatgca aatgctaaaa tcaaagacaa
    28261 taatctagaa caaaaaagtg ataacttcca attaggtatg tattctacta tcaatgtagc
    28321 tccacaatgg gaacttaatc ttaaagctta tgctcaagtt tctccaacta aacaagacaa
    28381 tgttcaaata gacggtgcat ataactcaga ttatacaagc aaattcttag gacttagcgc
    28441 taatgcaggt cgtgtgtttg actttagtga taatacttta tttattaaac cttttgcggg
    28501 agtaaattat tattttagtt atactccatc tcatacagaa aatggtgcta ttgctaaaga
    28561 tattgattct atgaaaaaca attctgtaag tgttgaagtg ggtgctgaat ttagaaaata
    28621 tatgaatgaa aactcttata tttttgtaac tccaaaaata gaacaatttg ttatcaatag
    28681 tggtgatgat tacacagcta acctagctgt aaataatgct ttctttacta gtattgaagc
    28741 taacaacaag aaaaaaacat acggacaaat tatcgtaggg ggtaatgtag attttacaaa
    28801 tcaactcagt atgaatcttg gctttggtgc taaacaaata ctagcaggta aagtagataa
    28861 taaaaatgaa acttacttaa gtggtcaagt aggacttaag tataaatttt aatcttaaaa
    28921 atcatttcta aatcttttta tagtttagaa atgattgttt atttctatgg gaaatctcct
    28981 agggctttat tttaaagtcc ttttttataa taaacaagta aataagtctt tagagtaaaa
    29041 accttaaaaa cttttagttt tctttgaaaa gtttagaagc taagtgcgtt gcacgacttt
    29101 gatccgcatc ctttttaaga gttttataga ttttactgac atattcttct aaaatttgtt
    29161 gtgagtcaat cactttttca ttactagcaa cttttgcata ttctccatca ttttgaagtt
    29221 cataagcaag taaattatcg ctgagttgca agcgcaagaa ttgtgctaat tttgccttac
    29281 ttctttcatc atatatagga gtcataagtt ctaaacgacg ctctaaattt cttggcatcc
    29341 agtccgcact tgatataaaa taatttggct cactgtgttt aaaataaaac accctagcat
    29401 gttctaaata ttttcctata atacttctaa cgcgtatgtt tttgctgaat tcttcattag
    29461 gttttaaaca gcaaattcca cgcacgataa gatcgatttg agttcctttt atacttgctt
    29521 cataaagagc ttttatgata tcgctatcta caagagaatt catctttgca atgataactc
    29581 cttcgcttcc tttgcttgcc tctaaagcta tcatttctag aattttttct ttgatttgat
    29641 ttggactcat agagagagtt tgaaggcgac gatttttgct aaaacctgaa agtatatgaa
    29701 aaaagcttgt tgtatctctt gcaaattcaa ctttgcttgt aaaataactc acatcagtgt
    29761 agattttagc actgcttgca ttgtaatttc ccgtacttaa atgcatataa aatttaagct
    29821 tatcgccctt tttgcgtata atttgagaaa ctttggcatg aactttaaag ccagtgattc
    29881 cataaatcac atgagctcca gcattttcta aagcttttgc ccagtgaaga ttgttttctt
    29941 catcaaagcg agctttaagc tctaccataa ctgtaacttg tatcccatcg cttgctgcat
    30001 cgattaaggc ttggactatg ttagagtttt tttctactct ataaagagtc attcttatag
    30061 aaataacctc aggatctttg cttgcttctt tgatgaactt ataaacagga tcaaagcttt
    30121 caaaaggttg aatgatgagt atatcttctt tatctatcgc atcaaaaatg gataaatttt
    30181 catcaaaagg cggtaaggtt ttaggtgtat aaagcggact taaaagatga gtaaaggttt
    30241 tattgccagc aatttgccaa aggctaggaa gatttaacaa gatagaatac tcataaacat
    30301 ccttgtggaa aattttcata tgagtattaa gaaattctac gatttgttca tctgcaccct
    30361 tttgaatttg taatcttaca aaagcacctt ttctacgaag ttttaagcct tgctctaata
    30421 tcatcataaa atcatcagct tcttcctctt ctatcaccat atctgcattt ctagttaccc
    30481 taaaagcagc tgaagcaagg agtttgtaac ctggaaaaat ttcttctgta tgtttttcta
    30541 ctatactttc aattggaaca taaacattgg cactcacttc ataaaaacga ggtaaaactc
    30601 ttggaattcg aatcattcca aatttgataa gctcaggatg ggttttatca caaattttaa
    30661 ccgccaaaga aaatgaaaga ttatttaggt gcggaaaagg gtgagtcgca tccacagcga
    30721 ttggaacaat aacaggaaaa atagtagaga aaaaatattc gtcacatttt tgtttgaggt
    30781 tgttgtctaa attttcataa tttttgataa aaagattttc tttttcaaga tcgcttataa
    30841 tttcattaaa ataatgctct aaaagatctt tttctttgtg aagatatttg cgtatagctt
    30901 ttaattgctg caaaggagac atctcatcac tactgcttat attaactcca gctgaaaaaa
    30961 gttgttttaa tccggcaacg cgtatcatat aaaattcatc caaattggta caatatatag
    31021 ctacaaattt aaggcgttct aataaaggca acggacgcga acattgatct aatacccgtg
    31081 agttaaagcg tagccaagaa agttctctat ttaaaaacat attcggattt gtttgcatta
    31141 aaactccttt ttttgcgtta ttttaacatt tatttttgaa aataatgagt tttttagaga
    31201 aataaaattc aaaattttta ttccggttaa ttaagagtaa atatatcttt aaatttatct
    31261 taaaaagcta tatgttagaa taacaatttc atttattctg aaagtttaag gaggaaaatt
    31321 ttgaaaaaat ctttgaatct ttttggtatt tttcttgttt tgctttttgt gttctttgcg
    31381 gtaggatttt atacctttta taatgcaaaa ggtacatctt acttaagtaa tgcaagtgaa
    31441 tcttgtaaca attgccatat tatgaacgag gtttataatg aatatatggc agggccacat
    31501 gcacaaaagg taaaaggaga agctagggca acctgtgttg attgtcattt accccatggt
    31561 ttcttggcta agtggatagc taaagctgaa agcggtttaa atcatgctta tgcttttact
    31621 tttaaacttg atgagcttcc tacaaatttg agtgcaactg aaaaaagcag gaatatgata
    31681 caagataatt gtgttcgttg tcatgctgat tttgctcaaa cagccatcaa tgctacaaca
    31741 aatccacatg cggacaaatc tttaaaatgt gcttcttgtc atcaagatgt gggtcacaaa
    31801 catggaattt aattaaggag gaattgaatg aaaaaaaatt ttttacgctt agctatcgtt
    31861 gttttagttt tgcttatagt gggagtttta tggctcaata atgatataaa tcaaaaaaaa
    31921 gaagacgagg caaacaaaaa tgccattgct gcaaatgcgg atttttcttt acttagcgat
    31981 gataatccaa attttgaaag atggggaaag gtttttccag agcaacttaa aatgtattta
    32041 acagttgaag aagaagagcc taaggctaca gaatttggtg gtaacttatc ttattcaaaa
    32101 cttattcgtt ttcctcaact aacaatactt tgggctggat atccttttag tcttgatttt
    32161 aatgaagaaa gaggacattt ttgggttcaa gtagatcaaa tgaaaaccgc aagaaataat
    32221 aaagattttc ttaatgctca cggacttaaa gcatttaagg gtcagccagc agcgtgtatg
    32281 aactgccata gtggatggac tccatggctt atcaataata ttgcaaaggg agattttgtc
    32341 gcatttaact ctacaaatta ttggactatg attaaaaatg ttcccgctgt tgatggtata
    32401 gtagaaaatt ctccagagca tgcaggaccg catggtggta agagaatggg tgtgacttgt
    32461 gcagattgtc ataatccaaa cgatatgagc ttaagactta ctcgtcctgc tgcaattaac
    32521 gctttagttg ctagaggtta tgaaaaagat ccagtacaag gcgtaaaagc cacaagagaa
    32581 gagatgagaa ctttggtttg ttcacaatgc catgttgagt attattttaa accaacagga
    32641 gaaaaagtaa aagtaatggg cgaaaccatt gctgatgata gttctaaaaa atggtgggat
    32701 ggcactcaaa aaaattatga tgaatatgaa ttttggagag atggcaacca accaaaagaa
    32761 atcgaagcta atggtatcat gttaacattc ccatggaatg agtggaaaaa agatcagcct
    32821 tttagaatcg aaatgttaga tgattattat gataaagttc gcaatgtatt tggtgcggat
    32881 ttcactcata aattaacagg tgcgcaaatc attaaaattc aacaccctga aagtgagctt
    32941 tatagtggtg gtgtgcatgc tgctaatgga gtaagttgtg cggattgtca tatgccttat
    33001 gttagagaag gtgctaagaa aatttctcaa cacaatatca cttctccatt aagagatatt
    33061 aattctgctt gtaaaacttg ccataaacaa agcgaggatt atttaagagc tcaagttcgt
    33121 gatatacaaa atagtgtagc gcatgatcaa agaacagctg aatatgctat tgttagccta
    33181 atcatggata ctaaaaaatt gcgtgatgag ttaggcaata tggaaaaatt ccaaactgat
    33241 ggtaaagctg atgcaagcaa gattagtgaa gaacttaaag aagttttaga gcttcaccgc
    33301 aaatctcaaa tgagagctga ttttgttaat gctgaaaatt caacaggttt ccacaatcct
    33361 cgtgaggctt caagaatgct tttacaagct gtagatatgg ctaaaacagg acaaattaaa
    33421 cttatagaaa ttgctaatgc taatggcatt aatgatttta aaacttcaaa tttaggtttt
    33481 gaagatatgc aaaaatttaa tcctggagag ctttattata aagtagatgt taatggacat
    33541 aaagcaggag agcgttatta tggtgatgaa atagaagtaa atggtaatcc tccaaaagaa
    33601 cttttagaac acgataaaaa ccttgctccg tataattatc aagtaattga taaaaaataa
    33661 ttcttaaaag ccctatattt tagggctttt tttatatctt tcaaaataaa atcttataat
    33721 ttttatctgt ttaatgtttt tatattttct atgcttttaa gcagtaaatt tttatagata
    33781 aaagtctatg attaattttg agttgtttag cacacacgat aagatggatt tataaaaaat
    33841 atagcacttg cttaagaaaa acgacaaaaa taatttttat agttttttaa aattagaatt
    33901 taaatcaatg cttctttgct ttaaatagat cgtttttaaa tgaaaaataa ccgattttat
    33961 tattggatta tacgaaaaaa gctcatttat tttagatgga taaagtatag aaatttttat
    34021 ttttaaagct tgcgttattt ggttgaaaaa taaggataaa attgaatttt attttattga
    34081 ttaagaaaaa gctttgtaaa gtttattttt gaaatgcaaa taatatataa aaggtaatta
    34141 aaatgatagt tgatagtttt ttttgaaagt cagtggcgga cagagaggga tttgaaccct
    34201 cgagacccga ttaagatctg cacccttagc aggggtgtgg tttcagccgc tcacccatct
    34261 gtccaataaa ttaaagtgtg attatataaa aaattagata atacctagct taaaaaagct
    34321 agataaaaaa attaaagact aagataagct aaaagtatag tgataacaac cccagctcca
    34381 agtgttgcaa gctgtttttg tctatctttt ttgctagcaa ataaagtaat gataagtcct
    34441 gagatataga gtaaaaataa agcaatacca aagcctatgc taagcacaga aaaataccac
    34501 gcccctttat ctttatgaag catgatcata tcgcctaaca aagatctagt tttaagagtt
    34561 attacatact cattttgagc aacaggagtt atattggcgc tataatgtgc tccacctata
    34621 gttatttcat tgtttttacc tttgccagct ttgacattag cgggagctgc attggcatta
    34681 tggtgtattc cgcccatatt cgcccccttg cctttgcctt gagtagcttc agcgtcagat
    34741 ggaactttta aattgttttc ttgtaagtat tggatgagtg catctttttc tttaccaggt
    34801 tctatatttt ttacaagttt ataagtttct acctttaaac ccgtatcttg atcggctcca
    34861 aggatataag caatccctgt aagtgcaaaa agtacagcac agggtaagaa aaataaactc
    34921 acataaatgt gaatttgtct aaataatttg tttttgttaa tcattttctc tcctttttga
    34981 ttatcaattt gtatggtatt ttgacaaaag aatgtgaagc gaaagtgaat tttttatagt
    35041 ggatataaac ttaaatttgt ttaagatttg tacttgatag ttggatttgg ataagagaat
    35101 gtaagagaac aacttctctt acatagggtt tatttaatag cgtttgttac ttctaaaatc
    35161 atggttttta atgattctaa gccattgcca cttgctagat accagtattc aggatcaaga
    35221 taaatgattt tattatttgt agcagcgttg gttttagtta caagtgcatt atcaagtatg
    35281 ccttgtgcgc gttctttatt gcccacaatg atatttctat caactacaaa tagataatca
    35341 ggattttttt ctagtataaa ttcagaatta atgctttttc catgtgtgcc tacttttaca
    35401 ttttcatcca cagcattgat tcctaaaaca tcatgaatga ttccaaagcg agattgaggt
    35461 ccaaaagcgg aaattttgtt agaattggtt agaacaataa gagctttttt atcttcatct
    35521 actatgcttt ttgcttgttc tatctcattt ttaatatctg caattttttc agaagcttct
    35581 ttttctaagc cataaagttt tgcaacactt aaaacattgt tttcaaaaga gcttaagaaa
    35641 tttgcattat caagtcctac aaacatagtt ggagcaattt cttttaattt ttcataaaat
    35701 ttgctttggc gtccggaaat gataataaga tcaggtttta aagcattaat agcttcaaaa
    35761 tcaacttgtt gaactccacc tatactaggc ttgtctttaa attgctgtaa gtattttggc
    35821 aagtttttag ctggaactcc tgcaacttta tcgttaagtc ttagggcatg gaaagtatct
    35881 aaaattccaa gatctaaaat cacaacttta gaaggatttt ttggaatttt gttttcacct
    35941 aggctatctt ttactaaaaa gctatcaccc tcatcactca tactaatagg tataaccttt
    36001 accgtagtgc tagtttttat tgcagtactt gcgttgtttt cattggattt agaatcgcaa
    36061 gctgttaaaa ttagacttaa aaagaatgca aaaaatgcaa aaactaaaga ttttttcata
    36121 tattctcctt tatttagaaa taaatacaaa tttttttccc atcaatctga cttacaggga
    36181 tatccatatc ataaatttgt cttaaaacat cttcttggat gatttcatct tttaaaccct
    36241 gttttaagag ttttccattt tttagggcta tgatttcatc agaataaatc gaagcaaaat
    36301 tgatatcatg aagtacaacg gctatgcttt tattaaagtc ttttactaaa tttttcataa
    36361 gttgcatgat ttgtacgcta tgtttcatat caagattatt aagaggttca tcaaacatga
    36421 taaattcagt atcttgagcg ataatcattg ctataaaagc tctttgtttt tgtcccccac
    36481 ttaagctgtc taaaaattca tttcttagag tgttaagtcc catatactca agtgcttcat
    36541 cgattttcat tttatcgttt aaattaattc ttccttgaga gtgtggaaag cgtccaaatg
    36601 cgaccaattc ttcaactttt aatcttaaat taatatgatt ttgctgttta agaatggaaa
    36661 ttttttgcgc aagatcttgt tctttgtata gtgttaaatt catgccatcg atatagattc
    36721 gcccactatc gggtttgatt aaacgacttg caagagctaa aagagtagat tttcctgctc
    36781 catttgcccc tataatggaa gtaatttttc ctttatgaaa atcgatacta agatctgaaa
    36841 tgatagcctt ttgatcgtag catttggtga tattttgtaa tcttatcata gtttattgcc
    36901 ttttaataca agatagataa aatatattcc acctaaaaaa ttgataataa cgcttatggt
    36961 tgtattgtaa tcaaaaattc tagagacaaa aaatactccc ccaagtaaag ctaaaatgct
    37021 aatgagtatg caagcaagta gtaaaatgct atgctttgca gttttaaaaa gttcgtaagt
    37081 gatatttact actaaaagtc ctaggaaggt gataggaccc acaagtgctg tgctaataga
    37141 agttaaaata gcaattatta tcataagatg ttttgaaatt ttttgatagt ttatccctaa
    37201 atttatggat aaatccttgc ccaaacttaa agggtctaaa aatttcatat agcgaaaaat
    37261 ccaaataaaa ctaagcaaag ttacgatata agcaagggct aaaacatcaa aagctacatt
    37321 atcaaaactt gcaaacattc ttccttgaat aatcataaat tcatcaggat cgataagaat
    37381 ttcaaaaaaa gagcttagtg tgctaaaaag tgttccaaaa atcaaaccta aaagcatgat
    37441 aagataaata cttttatcac tgctaaaaag aattttataa agtcctaaag aaaatacaac
    37501 catacaagct agagtgatta aaaaattaat atcatttcta tatacactca aatttgcaga
    37561 acctaaagaa aagacaaggg cgctttgaag aagcatatat aaagaatcca agcctatgat
    37621 ggcaggggtt aaaattttgt tattgcaaag agtttgaaaa atcacagttg atatagctat
    37681 acaaatagcc actataacaa tagctgcgat ttgcaaaaag cgatttttta atgcgtattc
    37741 atcaaaatct tttaaacctg caaatacaaa aacaagtgcc attataaggg ttaaaaaagc
    37801 taagattaag atttttttac gcataagttt tccttttgag taaaagaaaa ataaaaatta
    37861 aagagcccaa aacacctgtg gttatactca aaggcatttc aaaaggaaaa atcacaagtc
    37921 ttgagataat atcgcaaata agtaaaaaca aagccccgca taatgctata tagataagat
    37981 ttttcttaag attatccccg cgataaatgg caacaagatt agggatgata agacctaaaa
    38041 aaggtataac tccaatgctt acaatcacta cgctagtgat aatagaaact attattaagc
    38101 ctaaaaataa gattgtatta taagaaactc caagatttaa agcaagatct tctcccatac
    38161 ctgctatagt gattttatgg gctagaaaat aagcaagtat aaaaagcggt aaagaaatat
    38221 aaagcaattc ataatttccc tgcataacat ttgccatact gccctgtagc cagccttgga
    38281 tattttgtat ataatttaaa gcataagcaa aaaaagtggt tatagcattt ataatcccac
    38341 caaacattaa tcctatcaaa ggcacaaaaa tcacatcttt aagtttaatt tttcttagaa
    38401 tttggataaa tataaaagaa cccaaaagtg caaatacaga agcaatgata gtttgagtaa
    38461 aaaaagaagc tcctgtaaaa aatattaaag aaatcaaaat gccaaattta gcacaatcca
    38521 tagtccctgc agtggttgga gaaacaaatt tattttgcgt gagttgttgc atgatgagtc
    38581 cgcatatact aagactcata cctgtaagta aaattgcaat aagccttgga attcttgtaa
    38641 gtaaaatgat ttcgagctgg gtagtgctga gtgaaaaaat atcgtctaaa ttgatacgaa
    38701 taacccctat aaataagctt attattccaa aaacaacaag taaaattaaa ag
//
LOCUS       DBBXOW010000008        33871 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.008, whole genome shotgun sequence.
ACCESSION   DBBXOW010000008 DBBXOW010000000
VERSION     DBBXOW010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 33871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33871
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.008"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(1..116)
                     /locus_tag="ACJE1S_000403"
                     /pseudo
     CDS             complement(1..116)
                     /locus_tag="ACJE1S_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277691.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="modification methylase"
     gene            complement(330..656)
                     /locus_tag="ACJE1S_000404"
     CDS             complement(330..656)
                     /locus_tag="ACJE1S_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HGG0805974.1"
                     /translation="MKTKIIPAILACSAILASANMVPASTQTPAVAPAPLHPYPAYPQ
                     QAMPPQDYFNGLPKNINSQIQNLHPGAFIVDVDWEEYGYEVKLNNFMELYFDRNGNFL
                     GQKFDD"
     gene            complement(843..1226)
                     /gene="queF"
                     /locus_tag="ACJE1S_000405"
     CDS             complement(843..1226)
                     /gene="queF"
                     /locus_tag="ACJE1S_000405"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HGG0805975.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYIPDQFVVELKAIKLYINTFMHRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            1386..1985
                     /locus_tag="ACJE1S_000406"
     CDS             1386..1985
                     /locus_tag="ACJE1S_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HGG0805976.1"
                     /translation="MRKSIAIIGGSIAGLSAALFFASAKNEELDFDITVFDEGKADLK
                     AAAIYNVPFFPKGAKADEIYTHIKEQIASMLEVKYIDSKVVSISGEKGDFTVNDEQGL
                     GIKADYIIVATGANKSDIKELEDFVIPHELMPKPNKFCFKHHGRQIIKEGIYAAGLAS
                     GVTTMVACAMGSANEAACAILSDIKGAVSVYHDTPTTRN"
     gene            complement(1990..2871)
                     /gene="metA"
                     /locus_tag="ACJE1S_000407"
     CDS             complement(1990..2871)
                     /gene="metA"
                     /locus_tag="ACJE1S_000407"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008899 - homoserine O-succinyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0019281 - L-methionine biosynthetic process
                     from homoserine via O-succinyl-L-homoserine and
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HGG0805977.1"
                     /translation="MPLIIPENIPAYELLKEHAFIMGSRRAKHQDIRPQEILIINLMP
                     KKIETENQILSLLANSPLQVNITLLATTSYVGKNTPFTHLEKFYKGLDEVKKRKFDGA
                     IVTGAPVEQMDFEKVAYWKELLEIFDFLQQNVTSSMYICWGAMAALKHFHGVDKIALD
                     KKIFGIYKHDKISPDLLLTNLDEKVLMPHSRHSSMDEEQILALQKQGKLKVLLRNKKI
                     GSALLRDEKNIFILGHLEYFKDTLHQEYVRDNFIQKAKNYYDKKGNIKYNWRSNANTI
                     FANWLNYDVYQSTPFVL"
     gene            complement(2882..3103)
                     /locus_tag="ACJE1S_000408"
     CDS             complement(2882..3103)
                     /locus_tag="ACJE1S_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HGG0805978.1"
                     /translation="MVTLDTRGKVCPFPLVEAKNLVQTLKSGEELEILFDCTQATETI
                     PQWAAEEGHEIVDFELLGDAEWRIKLIKK"
     gene            complement(3113..4147)
                     /locus_tag="ACJE1S_000409"
     CDS             complement(3113..4147)
                     /locus_tag="ACJE1S_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HGG0805979.1"
                     /translation="MLSGIIVGLLLGFVLQRGRFCVVGAYRDVFLSKKFTIFIALFIV
                     VALQSIGVWALHSLGYISIKPQEFYWLSTIIGGIIFGFGMVIAGGCATGTWYRAGEGL
                     IGSIAALLFYAFSASAVKYGVLLPLQDNLNTFKISDGTFYQSLGISPWILVLALSLVV
                     GFFVIRELRKPRLKVARLKPRKQGISHILFEKSWHPFVTAVLVALIAILAWPLSSLSG
                     RNYGLGITTPSANLVQYLSTGDVQFVDWGVFLVLGIALGSFLGAKLSGEFRFRLPDKK
                     TLAYASIGGILMGVGASLAGGCTIGNGLVETSLFSYKGWVATVFFLIGAYIATFYTII
                     LPTRKATQKI"
     gene            complement(4159..5430)
                     /locus_tag="ACJE1S_000410"
     CDS             complement(4159..5430)
                     /locus_tag="ACJE1S_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HGG0805980.1"
                     /translation="MNFNKETLALHGAYNFDTQRSISVPIYQNTAYNFENLDQAAARF
                     NLQELGNIYSRIGNPTSDVLGQRLANVEGGAFGIPVSSGMAACFYALVNLASSGDNVA
                     YSNKIYGGTQTLISHTLKNFGIEAREFDIDDLDSLEKVIDQNTKAIFFESLSNPQIAI
                     ADIEKITQIAKKHKIVSICDNTVATPFLLQPFKHGVDIIVHSLSKYVSGQGSALGGAL
                     IERKDLNDLLKNNDRYKAFNTPDPSYHGLNLNTLDLPIFSIRIIITWLRDLGASLAPQ
                     NAWLLLQGLETLAVRIEKHSQNAEKVANFLNSHPDIKGVNYPTLASNAYHNLFKKYFD
                     KNFASGLLSFEARDYEHARRICDKTQLFLLAANLGDSKSLIIHPASTTHSQLSEEELQ
                     KAGIKKTTVRLSIGLENSDDLIADLKQAIES"
     gene            complement(5857..8451)
                     /gene="flgE"
                     /locus_tag="ACJE1S_000411"
     CDS             complement(5857..8451)
                     /gene="flgE"
                     /locus_tag="ACJE1S_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HGG0805981.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAIDGDGFF
                     MVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAQSTEVAIKANLNSGLNIGTSSRNLYALDSVHGWNTKTQRAEDENDTGTTQ
                     FYTTSKNSVEVTEKGVDAGALFNANGTGLNLRDGQGIWVSYADATYSTNKVGVNAFDP
                     NLQQNQTAAFWGTANQKVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTG
                     VKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAGELWNAIWDGNTNSFSFNN
                     TGNGGNQGPNINNNGSSLWTATNITFTPQPPAAATNVQLTGGLNAQIITAHKYIYSSN
                     PVDIGPMYNPDGGPQFVDNDNNPATRPTDPGSAAYWDAVNGGLLNTDVRTFRTTEDLR
                     ELLQRDARYGVDYDGSGTFAAADINQNIKVVVTADGHFAISNANEQSTVPPNAINGAA
                     ITTDPKNMSFNITAYSNKQGTVSTNDAFTAIFKAFDGPLVIGNQIKESEQLKLSAFSA
                     GLEIYDSLGSKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPTNIIVGTA
                     RFNNDGSLASYTPRTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATD
                     GYTSGNLKPEAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTA
                     NSGNIVVGEAGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQML
                     QTLIQLKQ"
     gene            complement(8655..9131)
                     /gene="ruvC"
                     /locus_tag="ACJE1S_000412"
     CDS             complement(8655..9131)
                     /gene="ruvC"
                     /locus_tag="ACJE1S_000412"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HGG0805982.1"
                     /translation="MKILGIDPGSRNCGYAIIEANKGKNILIEAGLIKIKPSTLQYQI
                     TELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAEYT
                     PLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV"
     gene            9235..10557
                     /gene="dnaA"
                     /locus_tag="ACJE1S_000413"
     CDS             9235..10557
                     /gene="dnaA"
                     /locus_tag="ACJE1S_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HGG0805983.1"
                     /translation="MNPNQILENLKKELSENEYENYIAILKFNEKQSKADFLVFNAPN
                     ELLAKFIQTKYGKKISHFYEVQSGNKASVLIQAQSQKHSSKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAISQKDKLGKLYNPIFIYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYANILGQEITLELAKSVMKD
                     HIKEKKENISIEDILSLICKEFNIKPSDVKSSKKTQNVVTARRIAIYLARELTSLTFS
                     QLANFFVMKDHTAISHSVKKIKELMEDDEQIKTKIEELKNKILTKSQS"
     gene            10724..11791
                     /gene="dnaN"
                     /locus_tag="ACJE1S_000414"
     CDS             10724..11791
                     /gene="dnaN"
                     /locus_tag="ACJE1S_000414"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HGG0805984.1"
                     /translation="MKLSINKNTLESAVLLCNAYVEKKDSSTITSHLLFEADEDKLII
                     RASDFEIGINYKIRKIRVENGGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPKTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDRINFVGTDTRRLAVYTLEKANNQEFHISIPKKAIMEMQKLFYEKIEIYYDENML
                     IAKNDNFEFFTKLINDKFPDYEKVIPKTFKQELKFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIETGVSEEFNLNIKIKYLLDFLTSIEEEQFTLSVNE
                     PNLAFVVNSQGLSMVIMPMIL"
     gene            11823..14135
                     /gene="gyrB"
                     /locus_tag="ACJE1S_000415"
     CDS             11823..14135
                     /gene="gyrB"
                     /locus_tag="ACJE1S_000415"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HGG0805985.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDIEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDTIFEVTEFDYDILAKRFRELAYLNPKITINFKDNRVGKSESFHFEG
                     GISQFVSDLNKKEALTKPIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKG
                     KLGSSYVRPIVSKASFEYLSKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYRYKKGQKKEIYLKDEKALNDYLIETGIESSNYEGIG
                     LNDLKDFLKIVAAYRSVLNELKKRFNVISVIRYLIENPDFIKENNEELFKIVKAFLEK
                     EGHNILNHYINENEIRIYVQTENGLEELIINDDLFSHPLYEEANYIFNKIKDRDLSFE
                     KDILDILDEVEKNAKKGAYIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAN
                     DTFNLFMGDEVEPRRDYIQTHAKDVKHLDV"
     gene            14298..14675
                     /locus_tag="ACJE1S_000416"
     CDS             14298..14675
                     /locus_tag="ACJE1S_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HGG0805986.1"
                     /translation="MLEVSRRNFLKATALSAVCLSGLNASFLEFSQAKQVKYFIKDSE
                     IPHQGNFINADEILLIEKDISNIYSQLKEAFENKVLIGSVSSGTTFFVIRTMAADYGM
                     RVAYEKKQGDFYTWILAPKGVKL"
     gene            14738..15700
                     /locus_tag="ACJE1S_000417"
     CDS             14738..15700
                     /locus_tag="ACJE1S_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HGG0805987.1"
                     /translation="MGKEWVFKTQEDLDLYRDAYSPQWDDDDEPIPSLALAPKNVEEV
                     QAIVKIANEFKIPLFPISTGKNLGYGSYVDGLFSQSNFGIVTKMGFWMMPKPEHYMLL
                     SIKMKKREDLIPAVEILNYLEDSFIVGWPQYFSPLNPPYGKPMNAELKGYLTSKNGLP
                     DMDKIQNYALKNKIPYWNIDVSVYGCKEVCYANLEYIKQRFKIIEGVDISIVQEFSSP
                     LNLEQKKQLKHKVTLGIPNMEIFWLSTRGEVLEPSDGHVWFSPIIPRDGKELLKCQEV
                     YMNLFREFGEESPITPFSHPRSWMYRAFCFMLAFNNSRTDKAHN"
     gene            15712..15843
                     /locus_tag="ACJE1S_000418"
     CDS             15712..15843
                     /locus_tag="ACJE1S_000418"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0805988.1"
                     /translation="MYRQMVQTAAEHGWGDYRAAPTFQDDVMGAYSYNNHILRRFNE"
     gene            15974..16321
                     /locus_tag="ACJE1S_000419"
     CDS             15974..16321
                     /locus_tag="ACJE1S_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG0805989.1"
                     /translation="MKKIALFFVLFVCLLNFNAKDKEWLPKGESISVYEYIPNNPRSP
                     AAFSSVDSKKLNANQRKGQQVYSKWCIACHGEGMPGTNALSVLYKDQGIPALLEDRTD
                     LSPDLVTIFFALW"
     gene            complement(16528..18174)
                     /locus_tag="ACJE1S_000420"
     CDS             complement(16528..18174)
                     /locus_tag="ACJE1S_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006847 - plasma membrane acetate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HGG0805990.1"
                     /translation="MKVFIFLSLIFNLALSAGFDLGEVHQKPINITAVSMFLVFVLAT
                     LFITYYSNKKSKSKSGFYTAGGNITGMQNGVAIAGDYMSAASFLGITALVFTNGFDGL
                     IYSIGFLVGWPIILFLIAEKFRNLGKFTFADITAYRLEAKPIRVISAISALSVIIFYL
                     IAQMVGAGQLIQLLFGLPYTFAVVLVGILMICYVTFGGMHATTWVQIIKAILLLAGAT
                     FMAVMILYLTKFDLKYYFDLAISHHPKGENIMKPGTFLPDTVSALSLGLALMFGTAGL
                     PHILIRFFTVKDAKEARKSVFYATGFIGYFYILTFIIGFGAIALLLGNPQFTNADGSF
                     NGASNMIAVTLADVLGGDVFLGFISAVAFATILAVVAGLAISGAGAISHDLYVNVIKK
                     GDVKHEDEMRVTKIATIAIGIFAILLGIVFEKQNVAFTVGLAFAIAASVNFPILLLCI
                     YWKNLTTKGAFWGGLIGLIVVLALVILSPSIWVKSFGFSEAIFPYDHPALFSMPLSFI
                     LIYIISKLDNSKRAKKDKEGFEAQDFRAQSGVGVSEAVAH"
     gene            complement(18171..18530)
                     /locus_tag="ACJE1S_000421"
     CDS             complement(18171..18530)
                     /locus_tag="ACJE1S_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HGG0805991.1"
                     /translation="MNLNAEQKNAVLRFKKFVSFRNKISLNLSLIVLICYYIFVLGIG
                     LMPEILGYKLGPSSITLGIMVGIGLILLCIISTGIYTFIANYFLDKEQEEVIKSLENE
                     GLLDALKDGKINYKELV"
     gene            18761..20062
                     /locus_tag="ACJE1S_000422"
     CDS             18761..20062
                     /locus_tag="ACJE1S_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HGG0805992.1"
                     /translation="MTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGIFSHIEI
                     METMSILIDGMKGNLKTALSYILLGAIAAAISRTNLTAYLIKVVSRFISHKKYLLLLS
                     IALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLPIG
                     FGLNFQDLLRENLEKNGVNVNLADVTNAMYYAAICMVLGLFLALFVFYRKPREYQEIE
                     IQKMDFDNIKMGRKEWGVLVGLILTLVLQIFTMNLPLSGLLGFISMVILGGVEYKSVN
                     DIFDDGLKLMGFIAFVMLVAAGYGEVLKQSGAVNELVNSVVPWMQENKFLAVFLMLLI
                     GLIITMGIGTSFGTIPIIATLFCPLCLELGFSAALIIFILGVAGALGDAGSPASETTM
                     GTSVGLSVDKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
     gene            20196..24686
                     /gene="gltB"
                     /locus_tag="ACJE1S_000423"
     CDS             20196..24686
                     /gene="gltB"
                     /locus_tag="ACJE1S_000423"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HGG0805993.1"
                     /translation="MDLENILENNQSVGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFMTQELGFELPQKGDYAVAQMFLS
                     PNADAKEEAKAIFLQGLKDKNLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPST
                     VNAGLEFERVLYACRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMESEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMGSKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDENNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKQWLKNLVELEKQH
                     SGVYKHKFLKEDEVLKLQKAFGWSYDELKMSVASMAQNGKEALAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKISLPI
                     ISNEELFEVKALNNFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIVLHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKDGVNK
                     NSAIKQVASGRFGVDLNYLSHAKELQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVMGCTMMRVCHLNTCPFGIATQDKELRDRFKGKVDDV
                     VNFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKPMQGKAGKVNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALSEDSIQIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATEGEVYLDGIAGERFCVRNSGAKAVVLGTGVHGCE
                     YMTGGLVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLSTKDEKELKTM
                     IENHIAYTNSKKAKDILEKFDKKDFFKVMPRDYEKMLEMIELCKDEEDPSLAAFLKIT
                     QK"
     gene            24696..26141
                     /locus_tag="ACJE1S_000424"
     CDS             24696..26141
                     /locus_tag="ACJE1S_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HGG0805994.1"
                     /translation="MGNARGFLDFKRVDFKKVAPKERVLNFKEFTTLLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGKSVSIKNNELAIIENAFKENLVSPNKPKQYNGKKIAVIGS
                     GPAGLACANTLNSLGYKVSVFERSDKVGGLLMYGIPDMKLDKSIVDRRVDLLKESGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAIYEKDPREYQKMTKKFLGKDKVESVEACDLKREFKEGKA
                     INVELPNSNQNYKADLVLLAMGFSGSEDAIASNFGVSLDEKNNVKTKNFQTTHEKIFA
                     CGDARKGQSLVVWAIKDGIECALNIHENLAK"
     gene            complement(26142..26717)
                     /locus_tag="ACJE1S_000425"
     CDS             complement(26142..26717)
                     /locus_tag="ACJE1S_000425"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HGG0805995.1"
                     /translation="MKTLFEENELLTPFDINLIGIDEAGRGALAGPMMMAACKLHKDL
                     EGLCDSKKLSEKRREELYEIILLHSDYLILAFSSEKIDEIGLSACLKMGLTLIKKHFK
                     TENNFLYDGNTNLGISGIKTQIKADANIKQVSAASILAKVSKDRVMNFLAKNFPCYEF
                     EKNKAYGTKAHKELIAKFGICKLHRKSFKLL"
     gene            complement(26755..27402)
                     /locus_tag="ACJE1S_000426"
     CDS             complement(26755..27402)
                     /locus_tag="ACJE1S_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin"
                     /protein_id="HGG0805996.1"
                     /translation="MRQYESYKCPKCGNEVEVQNVGGGKLSCCGVEMECITQDLTAIN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVAAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            27553..29229
                     /gene="ilvD"
                     /locus_tag="ACJE1S_000427"
     CDS             27553..29229
                     /gene="ilvD"
                     /locus_tag="ACJE1S_000427"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HGG0805997.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNEYAKIIKDEIRKNGCIPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSVE
                     SVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMRSGVTKKGEKISLSS
                     VFEAVGAYEANKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIKNIITQKAIRNAMVVDMAMGGSTNTILHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNTVYMDDIHKAGGVSAVMAEISSRE
                     GHILELDALTITGESLQDRLKNAKIKDETIIRKVDNAYSKVGGLAVLFGNLAEQGCVV
                     KTAGITGERKFKGKAVCFNSQDEAIKGIIKGKVQKGDVCVIRYEGPKGGPGMQEMLSP
                     TSLIMGMGLGADVALITDGRFSGATRGLSIGHVSPEAAEGGLIGLLKDGDEIEIDVDA
                     YIINANLSDEEITKRKNDFVMPQKEVKSRWLRMYQKLVTNASKGAVLDME"
     gene            complement(29276..30502)
                     /locus_tag="ACJE1S_000428"
     CDS             complement(29276..30502)
                     /locus_tag="ACJE1S_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HGG0805998.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMKIIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKITLNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHTIINDYEMK
                     LINDRILPFVPENLRAEFSYILGIREGRSNEASFVKNEFENRTYKNAKIELCSGSLSS
                     FNQNEFGAIDGKALKYCDKIAAFIEAGLSISYGVKSKELENGFEDMFRFFNESPTIDG
                     VNFLEICREFRDYFKI"
     gene            30578..31252
                     /gene="queC"
                     /locus_tag="ACJE1S_000429"
     CDS             30578..31252
                     /gene="queC"
                     /locus_tag="ACJE1S_000429"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HGG0805999.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            complement(31273..32790)
                     /locus_tag="ACJE1S_000430"
     CDS             complement(31273..32790)
                     /locus_tag="ACJE1S_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HGG0806000.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANFVFGYMLGDSPCTL
                     CWGQREAMIFIGVIALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVMFAFAPKFGSFDKELNGEKFRKFTKFSFAAVL
                     ISTLIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSTEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNNTNNSPFAEIDDELKIINEQTINFDKAINTLDYIND
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYKENKFLLMGSNKSFLR
                     FAKNPNADETLQYADFIKGNDKFEGQGESLGRGRLDTVRAKFNHVASMTTDDHYLYLA
                     TVPNNKDAKTFVISKVSLKDRVLSGEFTPKAELKEGKTLGDLYITSMTFKDGEIYALS
                     KNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN"
     gene            complement(32805..32972)
                     /gene="dba"
                     /locus_tag="ACJE1S_000431"
     CDS             complement(32805..32972)
                     /gene="dba"
                     /locus_tag="ACJE1S_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HGG0806001.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            complement(33020..33850)
                     /locus_tag="ACJE1S_000432"
     CDS             complement(33020..33850)
                     /locus_tag="ACJE1S_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HGG0806002.1"
                     /translation="MLGVFNSSGKVVNLADLDINVRDMNELIINFDEFKHKFKDLDSK
                     TAYEIPKEDYLAPIIEPRQDIICLGINFLDHAKESAQFKGEKFEEREYPVYFGKRCNQ
                     ATAPFGSISLHADVTSQLDYECELAFILSKDAYKIKAEDAKDYIFGYTIINEISARDL
                     QKRHKQFYRAKSLEGSTIMGPYITSVDEIAYPPELHLKSYVNKELRQNSNTKFFIFDI
                     GYVLEELSSGMLLKAGTIISMGTPSGVGMGLNPPVFLKKGDEIRCVIENLGEICNIIS
                     "
BASE COUNT        11671 a         5416 c         5859 g        10925 t
ORIGIN      
        1 taattttttt ctaagatatg taagtattct atggtttgag attgtttgca aattcgagaa
       61 gaatcggcct taaaacgctt ataaatttga ctttttaaat catattttcc atatttttaa
      121 agatttgttt ttcaaggaaa gcaagctcaa cataaatcac ttaacatcta aaaatattag
      181 actttttgcc tcaacgatag acaactaata tcaaaatata taacttatat ttaaaaaaat
      241 gtgcaattat aatataaatt tatctaaaaa agaataaaaa acacaaagag taaatttact
      301 ctttgtaaaa aagtttcaat caaaagtgat taatcatcaa atttttgtcc caaaaaattg
      361 ccattgcgat caaaataaag ctccataaaa ttattgagct taacctcata accatactct
      421 tcccaatcca catcaacaat aaaagcacct ggatgtagat tttgaatttg gctgttgata
      481 ttttttggta agccattaaa ataatcttgt ggtggcatag cttgttgtgg gtatgcagga
      541 tatggatgaa gtggggcagg tgcgactgca ggagtttgag tcgaagcagg gaccatgttc
      601 gcacttgcaa gaattgcaga gcatgctaga atagcaggga taatttttgt tttcattatc
      661 taactcctta aaatgtttta acaagtgtaa gtttatgttt tttgtgtgaa gcgagcgtga
      721 aagataagat aaaaaatatt tagaaaatag ctctataaat ttagaatatt gaaaaaattt
      781 tgaagctttt gcactttaaa gctatttttt ataaagcttt acatgaatgc aaaagcttta
      841 tttcattttg gcactaccat atcactgcga cattctatca ctgtgtgcac atttccgcgt
      901 ggattaaaat cccctaccac cttaatccat tttggcttga gcttatcttt taaggtatta
      961 taaatttcat tgatgcttgc ttcatgtgaa acatttctat gcataaaagt attgatataa
     1021 agttttatcg ctttaagttc aaccacaaat tgatcaggta tatactcaag ataaatcgtc
     1081 gcaaaatcag gataacccga acgcggacaa caacacataa attcaggtaa agtgattttt
     1141 ataatataat cattcttcgc atcattaggc caaatttcca tattttctac atcaaattct
     1201 ttaatttctt tttcaccata acgcatgagc tttccttatt gaaaattttt agaaaattat
     1261 ataaaaaatt acttttagag caattgaaaa ataaacattt ttaacaaatt gtataaaaaa
     1321 gatcgatatt agattaaata aagcttttta tactagaata agacaaattt ttaaaaagga
     1381 aaaaaatgag aaaatcaatt gcaattatag gcggtagcat cgcaggactt agcgcggctt
     1441 tatttttcgc ttcagctaaa aatgaagaac ttgactttga tatcactgtt tttgatgagg
     1501 gtaaagcaga tttaaaagca gcagcaattt acaatgttcc ttttttccca aaaggtgcaa
     1561 aagcagatga aatttacact catataaaag aacaaattgc ttctatgctt gaggtaaaat
     1621 atatcgattc aaaagtagta agcattagtg gagaaaaagg cgattttacg gttaatgatg
     1681 agcaaggctt gggtataaaa gcagattata tcatcgtagc aacaggggca aacaaaagcg
     1741 atatcaaaga acttgaagat tttgtaatac cgcatgagct tatgccaaag ccaaacaaat
     1801 tttgcttcaa acatcacggg agacagatta tcaaagaagg aatttacgca gcaggacttg
     1861 cttcaggtgt tacgactatg gtagcttgcg cgatgggaag tgccaatgaa gcagcttgcg
     1921 cgattttaag cgatatcaaa ggtgcagtaa gcgtatatca cgatacccct actacaagaa
     1981 attaaatcat caaagcacaa aaggtgtgct ttgatacaca tcataattga gccaatttgc
     2041 aaagatggtg ttcgcatttg aacgccaatt gtattttata ttgccctttt tatcgtaata
     2101 atttttagct ttttgtatga aattatctct tacatattct tggtgtaaag tatctttaaa
     2161 atactctaaa tggcctaaaa taaaaatatt cttttcatct cttaacaaag ccgagccaat
     2221 ttttttattt ctaagcaaaa ctttcaattt cccttgtttt tgtagtgcta aaatttgctc
     2281 ttcatccata ctagaatgtc ttgaatgagg cattaaaacc ttttcatcta aattcgttaa
     2341 aagtaaatca ggtgaaattt tatcatgctt ataaattcca aaaattttct tatctaaagc
     2401 gattttatct acgccatgaa aatgttttaa agcagccata gcaccccaac aaatatacat
     2461 agaacttgtt acattttgct gtaaaaaatc aaaaatttct aacaattctt tccagtaagc
     2521 aactttttca aaatccattt gttccacagg agctcccgta acaatagcac catcaaattt
     2581 gcgtttttta acctcatcaa gacctttata aaatttttct aaatgagtaa aaggagtgtt
     2641 tttacctaca tagctagtag tagctaaaag tgtgatattt acttgcaaag gagaatttgc
     2701 aagtaagctt aaaatttgat tttctgtttc aatttttttt ggcataagat tgatgattaa
     2761 aatctcttgc ggacggatat cttgatgttt tgccctcctt gatcccatga taaaagcatg
     2821 ttcttttaaa agctcataag cgggtatatt ttctggaata ataagtggca ttttttctcc
     2881 tttatttttt aataagcttt attctccatt ctgcatcgcc taaaagttca aaatcaacga
     2941 tctcatgtcc ttcttcagca gcccattgtg ggattgtttc tgtagcttgt gtacaatcaa
     3001 aaagaatttc taattcttca ccgcttttta aagtttgaac caaattcttt gcttcaacga
     3061 gtggaaaggg acaaaccttt cctctagtat ctaaagttac catatcttat ccttatatct
     3121 tttgtgttgc cttacgcgta ggcaatataa ttgtataaaa agtagctatg taagcaccta
     3181 ttaagaaaaa taccgtagca acccaacctt tatacgaaaa aagcgatgtt tctaccaatc
     3241 cattacctat ggtacagcct ccagcaagag aagctccaac ccccattaaa attcctccta
     3301 tgcttgcata agctagagtt tttttatcag gaagacgaaa tctaaattcc cctgataatt
     3361 tagcacctaa aaaagatcca agtgcgattc caagaaccaa aaaaactccc caatcaacaa
     3421 actgaacatc acctgtacta aggtattgta caagatttgc cgaaggagtt gtaatcccta
     3481 aaccataatt tcttccactt aagcttgaaa gaggccaagc taaaattgcg atcaatgcaa
     3541 ccaaaacagc cgtaacaaaa ggatgccatg atttttcaaa caatatgtgt gaaattcctt
     3601 gctttctagg ctttaatctt gcgactttaa ggcgtggctt gcgtaattct ctaatcacaa
     3661 aaaagccaac aaccaaactc aaggcaagca ccaaaatcca aggagaaatt cccaagcttt
     3721 gataaaaagt tccatcagaa attttaaaag tatttaaatt atcctgcaaa ggcaaaagaa
     3781 ctccgtattt tacagcactt gcactaaaag cataaaacaa taaagctgcg atagaaccga
     3841 tcaagccctc ccctgctcta taccaagttc ctgtagcaca tcctcctgct atgaccatac
     3901 caaagccaaa aataatccca ccaataatcg ttgaaagcca ataaaactct tgaggcttta
     3961 tcgaaatata tcctaaagaa tgaagagccc aaacaccaat actttgcaat gcaacgacga
     4021 taaaaagcgc tataaaaatt gtaaattttt tacttaaaaa tacatctcta taagctccca
     4081 caacgcaaaa tcgtcccctt tgcaaaacaa agcctaataa caaaccaact ataattccac
     4141 ttaacataaa cacgctcttt aactttctat agcttgtttt aaatccgcta tcaaatcatc
     4201 gctattttca agccctatgc ttaaacgcac agtggttttc ttaatgcctg ctttttgaag
     4261 ttcttcttca cttagttgag aatgagtagt agaagcagga tggataatta aagatttact
     4321 atcacctaaa tttgcagcaa gtaagaaaag ttgagtttta tcacaaattc ttctagcatg
     4381 ctcataatcc ctagcttcaa agcttaaaag tccactagcg aaatttttat caaaatattt
     4441 tttaaataaa ttatgataag cattacttgc taaagtagga taatttacac ccttgatatc
     4501 aggatgagaa tttaaaaaat tcgcaacttt ttcagcattt tggctgtgtt tttctatacg
     4561 cactgctaaa gtttcaagtc cttgtaaaag caaccaagca ttttgaggcg ctaaactagc
     4621 tcctaaatct ctaagccaag tgatgatgat tctaatgcta aaaattggca aatcaagtgt
     4681 atttaaattc agtccatgat aacttggatc aggagtgtta aaagctttat atctatcgtt
     4741 atttttaagc aagtcgttta aatcttttct ttctataagc gctccgccta aagcactgcc
     4801 ttgaccactt acatatttac ttaaactatg cacgattata tccactccat gtttaaaagg
     4861 ttggagtaag aaaggagtag caacggtatt atcacaaatg ctaacgattt tatgtttttt
     4921 tgctatttgg gttatttttt ctatatcagc tatggcaatt tgaggatttg aaagactttc
     4981 gaaaaaaatc gcttttgtat tttgatctat aactttttct aagctatcta aatcatcgat
     5041 atcaaattcc ctagcttcta tgccaaaatt tttaagtgtg tgagaaatta aagtttgagt
     5101 cccaccataa attttatttg aatacgcgac attatctccc gaacttgcta aattcacaag
     5161 ggcataaaaa caagctgcca taccgctaga aacaggaatt ccaaaagccc caccctcgac
     5221 attagcaagt ctttgtccta aaacatcgct tgtaggattg cctattcttg agtaaatatt
     5281 gccaagttct tgaagattaa atctcgctgc agcttgatct aaattttcaa aattatacgc
     5341 agtattttga tatataggca cactgatact tctttgagtg tcaaaattat aagctccatg
     5401 taatgctaaa gtttctttat taaaattcat tttttatcct tttttgttaa ttaaaaaaat
     5461 actaaaaagc cttttatcag ctttaaacta gattgtttgg aaatgtaaat ttatagaata
     5521 tgagtatata cgagtagatt aagcgtgcca agcacgcata cagaaagaag aaagcattaa
     5581 gttaaaacta atataagaca ttttttctcc tttctaaaaa attattggct attttatctt
     5641 taaaaaataa aattaaaatt aaattttaaa aaatttatat cacattgctg aaaattttat
     5701 tgcaactcac cccctagcaa gagtgagtta gcaataaatt gaaggcagtt caagcctaag
     5761 cctagtatta caagactacc aagataggct tgtaaagcaa ggcttgctcc ctttaaggga
     5821 gcaaaaaaca atattttata gaatactaag cttaaattat tgtttaagct ggattagagt
     5881 ttggagcatt tgatcactcg ttgaaatggt ttttgagttt gcttgataac ctctttgaat
     5941 gataataagc tctgttaaag aacgacttaa atccacattt gacatttcaa gagctgaggt
     6001 tttcatctca ccacgacctc ctgttcctgc ttcacctact acgatattac cactatttgc
     6061 agtaacttta aaaagatttc caccaatttc ctcaagacct gagttatttg ccactgaagc
     6121 cattgcgatt tttgctacag caaaggtttt accatttgta aattcaccta agatattacc
     6181 tttatcatcc acacggatag cctcaggttt taagttacct gaagtataac catcagttgc
     6241 ttgtcctgtt agagttgaag cagaatttga gcttacaaga ccgtcattgc ttccgcttgt
     6301 tccaaaggaa agtttgattt gttgatttgg tgcggcaccg ttattgggtg aaaaatttat
     6361 cgttcttggt gtataactag ctaaagagcc gtcattgtta aatcttgctg ttcctacgat
     6421 gatatttgta ggaccttcac ctgtagtgtt aatctctgca ggttcgggta cacggatgat
     6481 catttgccat tcattacccc catcttgagt ggtgctttgc ttaacaaact gcacttctaa
     6541 agtgtgtttt gaacctaagg agtcgtaaat ttcaagcccc gccgaaaaag cagaaagctt
     6601 aagttgctca ctttctttga tctgatttcc tataaccaaa ggaccatcga aagctttaaa
     6661 aatagcagtg aaagcatcat tagtacttac agttccttgt ttgttactat aagctgttat
     6721 attaaaactc atattttttg gatctgttgt aatggctgca ccattaatag catttggtgg
     6781 aacagttgat tgttcattag cattggaaat agcaaaatgt ccatctgctg ttactactac
     6841 ttttatattt tgattaatat cagctgcagc aaaagttcca cttccatcat aatcaacccc
     6901 atatctagca tctctttgca aaagctctct taaatcttct gtggttctaa aagttcttac
     6961 atcagtattt aaaagtccac cattaacagc atcccaataa gctgctgaac ctggatcagt
     7021 tggtcttgtt gctggattat tatcattatc tacgaactgt ggtccaccat caggattata
     7081 cataggacct atatctacag ggtttgaact ataaatatat ttatgtgctg ttattatttg
     7141 tgcatttaat ccaccagtaa gctgaacatt cgtagctgct gcaggaggtt gtggtgtaaa
     7201 tgtaatattt gtagctgtcc acaaagaaga accattatta tttatatttg gaccttgatt
     7261 accaccatta ccagtattat tgaaactaaa gctatttgta tttccatccc atatagcatt
     7321 ccaaagctca cctgctgtat tggtattggc aaccacaaga ttgatatttt tcatattatc
     7381 tgtagtacca tcagcattat cattgacaaa atcaattcca ctaccatcct tatttttaac
     7441 cgcttttaca cctgttccat cccttgtatc cgttggtgca gtaaaggtat tgatataagc
     7501 aatagcatca tcaatacttt gaatatcagc attttgaatt ctaaccccat ttaaagttat
     7561 atctaaattc actttttgat tagctgttcc ccaaaaagca gcagtttgat tttgctgtaa
     7621 atttggatca aaagcattta ctcctacttt attggtagaa tatgttgcat ctgcataaga
     7681 tacccaaatc ccttgtccat ctctaagatt taatcctgtg ccattagcat taaataaagc
     7741 tccagcatct acaccctttt cagtcacttc tacagaattc ttagaagtcg tataaaactg
     7801 agtggttcct gtatcatttt catcttctgc tctttgggtt ttagtattcc atccatgaac
     7861 agaatcaagt gcataaagat ttctacttga agttcctata tttaaaccac tatttaaatt
     7921 cgctttgatg gctacttctg tggattgcgc tgcagggata tgcataccgg gatcgataaa
     7981 aatattttgc ggagttcttg agctatctat actttgagta tcccagttga tattccaccc
     8041 ttggacaaca aaacctgcat tattaacaaa atttccataa gcatcgagtt taaaatcccc
     8101 gctccttgta agatagtttg taagaccacc atcatcactc accataaaaa aaccatcacc
     8161 atctatagca acgtcagtgt ttttatctgt ggtttgaact gaaccttgag aatgaattct
     8221 agttgtagaa cttactgaaa ctccaagacc gatttgaagt ggattagatc cgcctcttcc
     8281 atcagttgga gctgtagcaa ttttcacagt ttggctaaac atagtcccaa aatctgcacg
     8341 agagtattta aaaccagtgg tattaacatt tgaaatgtta ttaccttcaa catccatcgc
     8401 aacttgatgt gcttgtagtc cgcttacgcc agaccaaagt gatctcatca tcttaaatcc
     8461 tttataaaat attgctttaa aaaatttaac gctttggctt taaaaaactt ttgcgtttat
     8521 gtgaagttta caagcaaatt ctgttccaac ttttgaaatt ttttatgaat tttttaaaaa
     8581 tttatagaaa aaatttaaag gtattttagg agtttatgaa gctttgggct tttgtgtaat
     8641 aaaaattact aaaatcacac cctaactctt aaatttgctg catgggttaa agctactgca
     8701 atagcatctg tgatatccaa aggcttgata tctttactaa gtcctaaaag cctttttacc
     8761 ataaaagcaa cttgttcttt agttgctttg gctttccctg taacggcttt ttttacttgt
     8821 aagggagtgt attctgcaaa atctccatga atttgaagaa tttttaaaga tagggctccg
     8881 cgaaattgtg cgagttttaa aacggttttt ggattgtaag caaaaaagat atcttctata
     8941 gccacctcat caaaagaatg atttttaaaa atcaagtcca aaccctcgca aagctctgtg
     9001 atttgatact gtaaggtact tggctttatc tttataagtc ctgcttctat gagaatgttt
     9061 tttcctttgt tggcttctat gatagcataa ccgcaatttc ttgaaccagg atctatacct
     9121 aaaattttca atcttccacc ttaatcaata atgaaatgca aaagcttgat tttaaccttt
     9181 ttttataaaa tttaagataa aatttataca ttatgcaaaa tttaaagaga gattatgaat
     9241 ccaaatcaaa tacttgaaaa tttaaaaaaa gaattaagtg aaaacgaata cgaaaattat
     9301 atcgctatct taaaatttaa cgaaaaacaa agcaaagcag attttctagt ctttaacgct
     9361 cctaatgagc ttttagccaa attcatacaa acaaaatacg gtaaaaaaat ttcacatttt
     9421 tatgaagtac aaagcggaaa taaagcgagc gttttgatac aagcacaaag ccaaaaacat
     9481 agtagcaaaa gcactaaaat cgatatcgct cacatcaagg cgcaaagtac gattttaaat
     9541 ccttctttta cttttgaaag ctttgtagtg ggggattcta acaaatacgc ttatggagct
     9601 tgtaaagcta tctcacaaaa agacaaactg ggaaaacttt ataatcctat ctttatctat
     9661 gggcctacag ggcttggaaa aacgcacttg cttcaagctg tgggaaatgc aagtttggaa
     9721 atgggaaaaa aagtgattta tgctacgagt gaaaatttta tcaatgattt tacttcaaat
     9781 ttaaaaaatg gctctttaga taaatttcac gaaaaatata gaaattgtga tgttttactc
     9841 atagatgatg tgcaattttt aggaaaaaca gacaaaattc aagaagagtt tttctttata
     9901 tttaatgaga ttaaaaataa tgatgggcaa attattatga caagtgataa cccacccaat
     9961 atgctaaaag gtatcaccga acgcttaaaa agtcgttttg ctcatggtat catagcagat
    10021 atcactccac ctcaactgga tacaaaaata gccatcatac gcaaaaaatg cgaatttaat
    10081 gatatcaatc tttctaatga tatcattaat tatatcgcca cttctttagg ggataatata
    10141 agagaaatag aaggtatcat cataagctta aatgcttatg ctaacatact tggacaagaa
    10201 atcacccttg agctagcaaa aagcgtgatg aaagatcata tcaaagaaaa gaaagaaaat
    10261 ataagcatag aagacatttt atctttgatc tgtaaagaat ttaacatcaa accaagcgat
    10321 gtgaaatcta gcaaaaaaac tcaaaatgtc gttactgcaa gacgcatagc aatctaccta
    10381 gcaagggaac ttacaagcct tactttttca caacttgcta acttttttgt gatgaaagat
    10441 cacacagcta tttcacatag tgtgaaaaaa ataaaagaac tcatggaaga tgatgagcaa
    10501 ataaaaacaa aaatcgaaga attaaaaaac aaaattctta caaaaagtca aagttaagtg
    10561 aagaaatgtg aaaagaaaaa aagcaaaatg tgaaaaaata taattaagca aaatatggta
    10621 aaatacaaat ttaataattt tttgctaaag aatttcacaa tttcaatagt cttattatta
    10681 caatgaattt aaattatata taataaagcc aaggagaaaa aaaatgaaac taagtatcaa
    10741 taaaaatacc cttgaatcag cggtactttt atgtaatgcc tatgtagaaa aaaaagattc
    10801 tagcaccatc acttcacatt tactttttga agctgatgag gataaactta tcattagagc
    10861 gagtgatttt gaaataggga taaactataa aataagaaaa attcgcgtag aaaacggtgg
    10921 atttgctact gcaaatgcaa aaagcatagc cgatgtgata aaaagtttaa acaatgaaga
    10981 agtggtatta gaaaccatag ataatttttt atttataaga caaaaaagta caaaatacaa
    11041 acttcctatg tttaatcatg aagattttcc aaatttccct aaaacagaag gtaaaaacca
    11101 atttgacatt gattcaagtg atttaagtag atctcttaaa aaaattctac caagcattga
    11161 tactaacaac cctaaatatt ctctaaatgg tgcattttta gatataaaaa cagatagaat
    11221 aaatttcgtt ggaaccgata caagacgcct tgcagtttat actcttgaaa aagcaaataa
    11281 tcaagaattt cacatcagca ttcctaaaaa agctatcatg gaaatgcaaa aactttttta
    11341 tgagaaaatc gaaatttatt atgatgaaaa tatgcttatc gctaaaaatg acaattttga
    11401 attctttaca aaacttatca atgataaatt ccctgattat gaaaaagtta tcccaaaaac
    11461 tttcaaacaa gaacttaaat tttcaactga agattttata gatagtctta aaaaaatcag
    11521 tgttgtaact gaaaaaatga aacttcattt caacaaagat aaaattatct ttgaaggtat
    11581 aagcttagat aatatggaag caaaaaccga acttgaaatc gaaacaggag taagtgaaga
    11641 atttaatctt aatatcaaga taaaatacct acttgatttc ttaacttcaa tcgaagaaga
    11701 acaattcact ttaagtgtaa atgaacctaa cttagccttt gtagtaaatt ctcaaggctt
    11761 atctatggtt atcatgccta tgattttata aaaacttaaa atcttgagtt aaaaggaaaa
    11821 atatgcaaga aaattatggt gcgagtaata ttaaagtttt aaaaggctta gaagctgtta
    11881 gaaaacgccc aggtatgtat ataggagata ccaatatagg cggacttcat catatgattt
    11941 atgaagtagt ggataattct atcgatgaag caatggcagg acattgtgat actatagata
    12001 tagaaatcac taccgaagga agctgtatcg ttagcgataa tggtcgtgga attcctgtag
    12061 atatgcaccc tactgaaaat atgccaaccc taaccgtcgt tttaaccgtt cttcatgcag
    12121 ggggaaaatt cgataaagac acttataagg tttcaggagg tttgcatggt gtgggcgttt
    12181 cagttgtaaa tgcactttct aaaaaacttg tagctacagt tgaaagaaat ggagaaattt
    12241 atcgccaaga attttcagaa ggtaaagtca tcagtgaatt tggtgttata ggaaagagca
    12301 aaaaaacagg aactaccata gaattttggc ctgatgatac aatttttgaa gtaacagaat
    12361 ttgattatga tattttggct aaaagatttc gtgaacttgc atatttaaat ccaaaaatca
    12421 ctataaattt taaagataat cgtgtaggca aaagtgaaag ttttcatttt gagggcggaa
    12481 tttcacaatt tgttagcgat ttaaataaaa aagaagcttt aaccaaacct atatttttta
    12541 gcgtagatga agaagatgta aatgtagaag tagctttgct ttataatgat acttatagcg
    12601 aaaacttgct ttcttttgta aacaatatca aaacccctga tggtggaacg catgaagctg
    12661 gatttagaat gggtttaaca agagtgatta gcaactacat agaagcaaat gctagtgcta
    12721 gggaaaaaga ctctaaaatc acaggcgatg atgtgcgtga aggacttatc gctgtagtaa
    12781 gtgtaaaagt gcctgaacct caatttgaag gacaaactaa aggaaaactt ggctcttctt
    12841 atgtgcgtcc tatagtttca aaagcaagtt ttgaatatct tagtaaatat tttgaagaaa
    12901 atcctatcga agcaaaagct attatgaata aagctttaat ggcagctaga ggaagagaag
    12961 cagcaaaaaa agcaagagaa ttaacgcgta aaaaagaaag cttgagtgta ggaactttac
    13021 cagggaaatt agctgattgt caaagtaaag atccgagtga aagtgaaatt tatcttgtgg
    13081 aaggggattc tgcaggaggt tctgcaaaac aaggtagaga aagatctttc caagctatac
    13141 tgcctttgcg tggtaaaatt ttaaatgttg aaaaagcaag attagataaa attttaaaat
    13201 ctgagcaaat tcaaaatatg attaccgctt ttggctgtgg tataggtgag gattttgatc
    13261 tttcaaaact aagatatcat aaaatcatca tcatgacaga tgcggatgtt gatggatcac
    13321 atatacaaac cttgctttta actttcttct tccgttttat gaatgaactt gtggctaatg
    13381 gacacattta tcttgcccaa ccaccgcttt accgctataa aaaaggtcaa aagaaagaaa
    13441 tttatctcaa agatgaaaaa gctttgaatg attatctcat cgaaacaggt attgaaagtt
    13501 ctaattatga aggaattggc ttaaatgatt taaaagattt tctaaaaatc gttgccgctt
    13561 atcgctcggt attaaatgag cttaaaaagc gtttcaatgt gatttctgtg attagatatt
    13621 tgatcgaaaa ccctgacttt atcaaagaaa ataatgaaga actttttaaa atcgttaaag
    13681 cttttttgga aaaagaaggg cataatattt taaatcatta tatcaatgaa aatgaaattc
    13741 gcatttatgt gcaaactgaa aatggtttgg aagaacttat catcaatgat gatttatttt
    13801 cacaccctct ttatgaagag gcaaattata tctttaataa aataaaagat cgtgatttga
    13861 gctttgaaaa agatatttta gatatcttag atgaagtaga aaaaaatgcc aaaaaaggtg
    13921 cttatatcca acgctataaa ggtttgggtg aaatgaaccc tgaacaactt tgggaaacaa
    13981 ctatggatcc aagcgtaaga agacttttaa aaatcactat cgaagatgca caaagtgcta
    14041 atgatacttt taatctcttc atgggcgatg aggttgaacc aagacgcgat tatatccaaa
    14101 cacatgctaa agatgtaaaa catttggatg tgtaaaaatt ttttagtgtc aaatttacaa
    14161 tttgacacta aattctatct ttttgtttaa aaatttcaca ctttgttaca ataattcata
    14221 ttttatcttt actcaaatta ttttttaaat ttatagattt ataatttgta atactaaata
    14281 cttaaaacga ttaattcatg ttagaagttt cgcgtagaaa ttttttaaaa gctacggctt
    14341 taagtgctgt ttgtctttct ggtttgaatg cttctttttt ggaattttct caagctaaac
    14401 aagtgaaata ttttatcaaa gatagtgaaa ttcctcatca aggaaatttc attaacgcgg
    14461 atgaaatttt acttattgaa aaagatatca gcaatattta ctcacaactt aaagaagctt
    14521 ttgaaaataa agtactcatt ggaagtgtga gtagtgggac aacttttttt gtgatccgca
    14581 ctatggcggc ggattatggt atgcgtgttg cgtatgaaaa aaaacaaggt gatttttata
    14641 cttggatttt ggcaccaaaa ggagttaaat tataatttta ccaaaaaatg tttcgcaaag
    14701 tgattttaca gctgcagtag caaaatttga aaaagctttg ggtaaagagt gggtatttaa
    14761 aacccaagag gatttagatc tttatagaga tgcgtatagc ccgcaatggg atgatgatga
    14821 cgaacctatc ccttctttag cgcttgcacc taaaaatgtg gaagaagttc aagctatagt
    14881 taaaatagca aatgaattta aaattcctct ttttcctatt tccacaggta agaatttagg
    14941 ctatggttct tatgtagatg gacttttttc acaatctaat ttcggtatcg ttacaaaaat
    15001 gggcttttgg atgatgccaa aaccagagca ttatatgctt ttatctataa aaatgaaaaa
    15061 acgcgaggat ttgatcccag cggttgaaat tttaaattat cttgaggata gttttattgt
    15121 gggttggccg cagtatttta gtccattaaa tccaccttat ggaaaaccga tgaatgcgga
    15181 gttaaaaggc tatcttacaa gtaaaaatgg cttacctgat atggataaaa ttcaaaatta
    15241 tgctttgaaa aataaaatcc cttattggaa tatcgatgtt tcagtttatg gctgtaaaga
    15301 agtgtgctat gcaaatttag aatatatcaa gcaaagattt aaaatcattg aaggtgtaga
    15361 tatttctatc gttcaagaat ttagttcacc tttgaatttg gagcaaaaaa agcagcttaa
    15421 acataaggtt actcttggaa ttccaaatat ggaaattttt tggcttagca caagaggtga
    15481 ggttttagaa ccaagtgatg ggcatgtatg gttttcacct attattccac gcgatggtaa
    15541 agaactttta aaatgccaag aagtgtatat gaatttattt agagaatttg gggaagaatc
    15601 tcctataaca cctttttcgc atcctagaag ttggatgtat cgtgcatttt gctttatgtt
    15661 agcctttaat aactcaagaa ccgataaagc acacaattaa aagtgcgtaa aatgtatcgt
    15721 caaatggttc aaactgctgc agaacatgga tggggagatt atcgcgcagc tccaactttc
    15781 caagatgatg taatgggtgc gtattcttat aacaatcata ttttacgccg ctttaatgag
    15841 tagcttaaag attgtattga tccaaatgga atttagcacc tggtcgtgga ggcatttggc
    15901 ctaaaaattt aagagatgag cgttttgtta ataacaaacg cgacgcatta agaatgaaag
    15961 aaggtaaaga aaaatgaaaa aaatcgcttt attttttgtt ttatttgttt gcttgctgaa
    16021 tttcaatgct aaggataaag aatggttgcc aaagggtgaa tctataagtg tttatgagta
    16081 tattccaaac aatccaagat cccctgcagc attttcaagc gttgatagta aaaaattaaa
    16141 tgcaaatcaa agaaagggac agcaagttta tagtaagtgg tgtatagcat gtcatggcga
    16201 gggaatgcct gggacaaacg cactttcagt tctttataaa gatcaaggaa ttcctgcgct
    16261 tttagaagat agaacggatt taagccctga tttggtaacg attttttttg cgttatggta
    16321 aacattcaat gccgtttttc cgtaaaactg aaatcagcga taaagaattg cagtatttag
    16381 gtgagtattt gggtagaaac tacaaataaa gataaactct aaaggacttt atgttaagta
    16441 aagtcctaaa atacttttct aatgagaata tttactggtt taaatttaaa aaagcttctg
    16501 tgctaaatgc aaagaagctt tttttgttta atgcgccaca gcttcactta ctcccacacc
    16561 gctttgagct ctaaaatctt gtgcttcaaa accttcttta tcttttttag ctcttttaga
    16621 attatccaat tttgaaatga tataaatgag tataaaactt aaaggcattg aaaataaagc
    16681 aggatgatca taaggaaaaa tagcttcact aaaaccaaaa ctttttaccc atatactagg
    16741 gcttaaaatc acaagagcaa gaacgactat aagtcctata agtccacccc aaaaagcgcc
    16801 tttagtggta agatttttcc aataaataca gagtaaaagt ataggaaaat ttacactcgc
    16861 agcaatagca aaagcaagtc ctacggtaaa agcaacattt tgtttttcaa agacaatgcc
    16921 tagcaaaata gcaaaaattc ctatagctat agttgcgatt tttgtaactc tcatttcatc
    16981 ttcatgtttg acatcaccct ttttgataac attgacatat aaatcatgac ttatagctcc
    17041 tgcacctgaa atcgcaagtc ctgcaacgac tgctaaaata gtagcaaaag ctactgctga
    17101 aataaatcct aaaaagacat ctccacccaa aacatcagct aaggtaactg ctatcatatt
    17161 actagcccca ttaaaacttc catcagcgtt agtaaattga ggattaccaa gtaagagcgc
    17221 tatagcacca aagcctatga tgaaagtaag tatgtaaaaa taccctataa atcctgttgc
    17281 ataaaatact gactttctag cttctttagc atcttttacg gtaaaaaatc ggataagtat
    17341 atgaggtaaa cccgcagttc caaacataag agccaagcct aaagaaagag ctgatacggt
    17401 atcaggcaaa aaagtccctg gtttcattat gttttcacct tttggatgat gagaaatggc
    17461 taaatcaaaa taatatttta aatcaaattt cgtaaggtat aaaatcataa cagccataaa
    17521 agtagcccct gctagaagta aaatggcttt gatgatttgc acccaagtgg ttgcgtgcat
    17581 tcctccaaag gttacataac aaatcattaa aattccgacc aaaacaaccg caaaagtgta
    17641 aggtaaacca aaaagcaatt gtatgagttg tcctgctcct accatttgag caataagata
    17701 aaagataata acgcttaaag cagaaatagc tgatataacg cgtataggct tagcttctaa
    17761 acgataagcg gtaatatctg caaaggtaaa tttgccaaga tttctaaatt tttctgcaat
    17821 taaaaataaa ataataggcc aacccactaa aaatcctata gaataaataa gcccatcaaa
    17881 gccattagta aaaactaaag cggtaattcc aagaaagctt gccgcactca tataatcccc
    17941 cgctatagct acaccatttt gcattcctgt gatatttcct ccggcggtat aaaatccact
    18001 tttggatttg gattttttgt tagaataata ggtgataaac aaagtagcta aaacaaagac
    18061 taaaaacata ctaacagcag ttatatttat aggtttttga tgaacttctc ctagatcaaa
    18121 accggcgctt aaggctaaat taaagattaa acttaaaaat ataaagactt tcatactagc
    18181 tccttataat tgatttttcc atcttttaac gcatcaagca acccttcatt ttccaagctt
    18241 ttaatcactt cttcttgctc tttatcaaga aaataatttg cgataaaagt gtaaattcct
    18301 gtggaaataa tacacaataa aatcaggcca atgcctacca taataccaag cgtgatggaa
    18361 ctaggaccca gtttataccc taaaatttca ggcataagtc ctatacctaa aacaaagata
    18421 tagtaacaaa taagcactat caaagatagg ttaagcgata ttttgtttct aaaagaaaca
    18481 aactttttaa atctcaaaac agcatttttt tgctccgcat ttaaattcat gagtactcct
    18541 ttcaatgttt ataattcaat ataacaaaaa attcaatgaa ttaaggcttt ttattttaaa
    18601 aatttgtgta ataatagaat ttttatctta aatatgaaaa aaagtaacat atatttatca
    18661 atgttactaa aatttacata ttaattcatt gataattttt atctcatttt aaaaaatttt
    18721 tctttagaat taagctttta taaattcaca aggaaaaatt ttgaccctgc ttacaaatcc
    18781 tatcatcatc agtgtagttt tgatgacttt actttgttta tttcgtttta atgtactttt
    18841 gagtcttttg atttctgctt tagttgctgg aattttttct catattgaga ttatggaaac
    18901 tatgagtatt ttaatcgacg gaatgaaggg aaatttaaaa accgctttaa gttatatact
    18961 tttaggtgct attgctgctg cgatttcaag gacaaattta acagcttatt tgattaaggt
    19021 agtcagtcgt tttatctctc ataaaaaata tcttttactt ttgtccatag ctttgatttc
    19081 ttgtttttcg cagaatttaa ttcctattca tgtggcgttt attcctttgc taatcccacc
    19141 acttctaagt ctttttaata aattaaaaat cgatcgtagg gctgttgctt gtgctttaac
    19201 ctttggactt acgacacctt atatggtttt gcctataggt tttggactta acttccaaga
    19261 tcttttaaga gaaaatttgg aaaaaaatgg ggttaatgtc aacttagcag atgtaacaaa
    19321 tgcgatgtat tatgctgcta tttgtatggt gttaggactt tttttagcgc tttttgtatt
    19381 ttatagaaaa ccaagagaat atcaagaaat agaaattcaa aaaatggatt ttgataatat
    19441 caaaatggga cgcaaagaat ggggcgtttt agtagggctt attttgactt tggttttaca
    19501 aatttttacg atgaatttac ctttatcagg gcttttgggc tttatttcta tggtgatttt
    19561 gggcggagtt gaatataaaa gtgtcaatga tatttttgat gatggactta aattaatggg
    19621 ctttatcgct tttgttatgc ttgtagcagc gggttatgga gaagttttaa aacaaagcgg
    19681 tgctgtaaat gagcttgtaa attccgtagt gccttggatg caagaaaata aatttttagc
    19741 ggtattttta atgcttttaa taggtcttat tattaccatg ggtataggta cttcttttgg
    19801 gactattcct atcatagcta cacttttttg tccgctttgt ttagaacttg gttttagcgc
    19861 agcacttatt atatttatct taggagtagc aggggcctta ggagatgcag gaagtccagc
    19921 aagtgaaacg acgatgggaa cgagtgtggg attaagtgta gataagcaac acgatcatat
    19981 aaaagatact tgtattccta cttttatttt ttataatggg cctttgctga ttttaggaag
    20041 tatcatagcg atgtttttat aatttttata aatccattga aatatttttt aatttattta
    20101 tttttaagat aaaaaatatc tcgatattaa aaaaatatat gttataatcc ttaacaagct
    20161 atcaaattta aaatcaatct tataaggaga ataaaatgga tttggaaaat atcttagaaa
    20221 acaatcaaag cgtaggttta tatcacccta aaaatgaaca cgatgcctgt ggtattgccg
    20281 cagttgccaa tatacgcggt attgcttctt ataaggttat ttgtgacgct ttagaaattt
    20341 tgatgaatct tgaacaccga ggcggtgcgg gagctgaaga aaattcaggt gatggagcgg
    20401 gaattttgat tcaaattcct catgattttt tcatgactca agagcttggt tttgagcttc
    20461 ctcaaaaagg tgattatgct gtagctcaaa tgtttttatc gcctaatgca gatgctaaag
    20521 aagaagcaaa agcgatattt ttacaaggtt taaaagataa aaatttagaa tttttaggtt
    20581 ttagagaagt gccttttaat cctagcgata taggagcaag cgctttaaaa gctatgcctt
    20641 attttttaca agcttttgta aaaaaaccaa gcacggttaa tgcaggactt gaatttgaaa
    20701 gagtacttta tgcttgtcgt cgtcttatag aaaaaagagc tattaatgtg cctaaatttt
    20761 atttttcaag cttttcttca cgcactatag tttataaagg aatgcttctt tctactcaat
    20821 tgagtgattt ttatcttgat tttaaagatg tcaatatgaa atcagccatt gctttggtgc
    20881 attctcgttt ttcgactaat accttcccaa gctgggaaag agctcatcca aaccgctata
    20941 tggtgcataa tggagagatt aacactatac gaggaaatgt cgatagcata agagctagag
    21001 aaggtttgat ggagagcgaa tattttgaaa atttagatga aatttttcct atcatagcaa
    21061 aaccaagtag tgattctgct atgtttgata atactttaga atttttagct ttaaatggac
    21121 gcactttaga agaagctttt atgatgatgg tgccagaacc atggcataaa aatgagaaca
    21181 tgggaagtaa aaagcgtgct ttttatgagt atcattcttt attgatggag ccttgggatg
    21241 gacctgctgc tatagttttt actgatgggg ttatcatggg ggcgagttta gatagaaatg
    21301 gttttcgtcc ttcaagatat tatcttacaa aagatgatat gctcatactt tcaagcgaaa
    21361 caggagcttt aaaacttgat gaaaacaata tcaaagctaa aaaacgccta gaacctggaa
    21421 aacttttact tgtagatact gcaagaggta gagtaatagc tgataatgaa atcaaagagc
    21481 attatgctaa tgcgaagcct tataaacaat ggcttaaaaa tttagtagag cttgaaaaac
    21541 aacacagcgg ggtttataaa cataaatttt taaaagaaga tgaggtttta aaacttcaaa
    21601 aagcttttgg atggagctat gatgagctta aaatgagtgt agcaagtatg gcacaaaatg
    21661 gcaaagaagc tttagcggct atgggtgtgg atactccttt ggctattctt tctaagactt
    21721 atcagccttt gtataattat tttaaacaac tttttgctca agtgactaat ccacctttag
    21781 atgctataag agaagagatt gttacttcta caaggatata tttaggaagc gaagggaatt
    21841 tgctaaaacc agatgaaaat aatgcaaagc gtgttaaaat ttctttgcct attattagca
    21901 atgaagagct tttcgaggtt aaagccttaa acaatttcca agttaaagaa ttttctatac
    21961 tttatgatta ttctaaaaaa actttagaaa aggctttaga tgaactttgc gttaagatag
    22021 aagatgaggt taaaaaaggt gtttctatta tcattttaag cgataaagga gtggatgaaa
    22081 aaaacgctta tatccctgct ttgcttgctg tttctggagt gcataatcat ctagtaagaa
    22141 aaaatttaag aacacataca agtcttatca tcgaaagtgg tgaacctaga gaaattcatc
    22201 attttgcatg tcttttaggt tatggtgcga ctgttattaa tccttatttg gtttatgaga
    22261 gtatacaaaa actcattgcc aataaagatt taaatttaag ttatgaaaag gcggtagaaa
    22321 attttatcaa agcaagttca agtggtatag tcaaaattgc ttctaaaatg ggagtttcta
    22381 ctttacaaag ttataatggt tctgctcttt ttgagtgttt gggcttaagc tctaaggtga
    22441 ttgataaata ctttacttct acaacttcac gcattgaagg tatggattta gaagattttg
    22501 aaaaagagct cattgtttta cacaaacatg cttttaatga tacgcataag gctttagatt
    22561 ctaaaggaat tcatggtttt agaagtgcta aagaagaaca cttaatcgat ccacttgtga
    22621 tttttaatct tcagcaagct tgtcgcaata aagactataa aagctttaaa aaatactcgg
    22681 ctttagtaga tgaaaaacaa gtgaatttgc gttctttgat ggaatttgat tttagtgaag
    22741 ctatcagtat agataaggtt gaaagtgtag aaagtatagt taaacgcttt agaacagggg
    22801 cgatgagtta tggttctatt tctaaagaag cacacgagtg tttagcacag gctatgaata
    22861 aaataggtgc taaatcaaat tcaggcgagg gcggtgaaga tgaggaacgc tatgaaatca
    22921 aagatggagt caataaaaat tctgctatca aacaagtagc aagtgggcgt tttggggtgg
    22981 atttaaacta cttaagtcat gcaaaagaat tacaaatcaa agtcgctcaa ggtgcaaaac
    23041 caggcgaggg cggacaatta atgggcttta aagtttatcc ttggatagct aaggctagac
    23101 attctacagc gggtgtgacg ctgatttctc caccacctca tcatgatatt tattctatag
    23161 aagatttggc tcaactcatt tatgatttaa aaaatgcgaa taaagacgcc aaaatttcag
    23221 taaaacttgt aagcgaaaat ggtataggaa cagttgctgc aggtgtggca aaagcaggag
    23281 cgaatttaat ccttgtttca ggttatgatg gaggaacagg agcaagccct agaacttcta
    23341 taccgcatgc gggaattcct tgggagttag gcttagctga aacgcatcaa actttgatct
    23401 taaataagct tagagatagg gtaagattag aaactgatgg aaagcttatg aatgggcgtg
    23461 atttagccat agcagcactt ttaggagctg aagaatttgg ctttgctact gcgcctttga
    23521 ttgttatggg ctgtacgatg atgagagttt gtcatcttaa tacttgtcct tttggtattg
    23581 ccactcaaga taaagaactt agagatcgtt ttaaaggcaa agtagatgat gtggttaatt
    23641 tcatgtattt tatagctgaa gagcttagag aatatatggc aagacttggt tttgaacgcc
    23701 ttgatgatat gataggaaga gttgataaac tccgtcaaaa acctatgcaa ggtaaagcag
    23761 gtaaagtgaa tttagataaa attttaaaat ccttacctac ttataacaga accgctgtgc
    23821 attttaaaga ctataaagac aataaacttg aaaaaacgat tgattataga attttactcc
    23881 cactttgtaa aaatgctgtg gagaaaaaag agcctatcaa actttcttta gaggtaggaa
    23941 atcaaagccg tacttttgct actatgcttt caagtgaaat tctaaaaact tatggcaaag
    24001 acgctttaag cgaagatagc atacaaatta aagccatagg aaatgcaggc aatagctttg
    24061 gagcattttt gttaaagggt attaagcttg agattatagg cgatagcaat gattatctag
    24121 gtaaaggttt aagcggaggt aagatcattg ctaaaatttc aaatgaagcc actttttcac
    24181 ctgaagaaaa tatcatcgca ggaaatgctt gtttgtatgg agcaaccgag ggtgaagtgt
    24241 atttagatgg tatagcagga gaaagatttt gcgtaagaaa ttcaggagct aaagcggtag
    24301 ttttaggaac aggcgtgcat ggttgtgagt atatgacagg ggggcttgtc gtagtgcttg
    24361 gcgatgtggg tgcaaacttt gctgcaggta tgagtggggg tgtggtttat atctttggaa
    24421 gacacaatga agcccatgta aataccgagc ttgtggatat taaagatctt agcactaagg
    24481 atgaaaaaga attaaaaacg atgatagaaa atcatatcgc ttataccaat tctaaaaagg
    24541 ctaaggacat actcgaaaaa tttgacaaaa aagacttttt taaagttatg ccaagagatt
    24601 atgaaaaaat gttagagatg atcgagcttt gcaaagatga agaagatcca agtttggcag
    24661 catttttgaa aatcacacaa aaataaggag taaaaatggg aaatgcaaga ggttttttag
    24721 attttaaaag ggtagatttt aaaaaagttg ctcctaaaga aagagtttta aatttcaaag
    24781 aatttacaac gcttttagac aagaaagaac aagaaattca gggcggacga tgtatggatt
    24841 gtggggtagc attttgccat acgggtgtga tgagtgaagg caaggatgta ggctgtcctt
    24901 taaacaatct catccctgaa tggaatgatc ttatttatcg ttctttatgg aaagaagctt
    24961 atgaaagact tgatcttacc aatccttttc ctgaatttac tggccgtgtt tgtccggctc
    25021 cttgtgagga ttcttgtgtg tgtgcgatta atggaaaaag cgtaagtatc aaaaataacg
    25081 agctagccat catagaaaat gcttttaaag aaaatttagt aagtccaaat aaacctaaac
    25141 aatacaatgg caaaaaaatc gcggtcatag gaagtgggcc tgctggactt gcttgtgcta
    25201 ataccttaaa ttcacttggc tacaaggtaa gtgtttttga aagaagcgat aaagtaggcg
    25261 ggcttttaat gtatggaatt cctgatatga agcttgataa aagtatagtc gatagacgcg
    25321 ttgatttact caaagaaagc ggtatagaat ttaaggtcaa tgaaaatata gacagcaaag
    25381 ataaggtttc taaactttta aaagaatttg atgctttagt actttgcaca ggagcgagta
    25441 agcctatcga tcttgatata gagggtagaa aactaaaggg tgttgaattt gctcttgatt
    25501 tcttaacgca aaataccaaa accttgctaa aaacaggtaa gggtgctgat acagcaaagg
    25561 gtaaaaatgt cttggttata ggaagcgggg acacaagtgt tgattgtatc gctgtagcta
    25621 caagacaagg agctaagtcc atagtgcgtt ttgaaagaag tccaaaaaga cctttacaaa
    25681 gaagtcaaaa caatccttgg cctttaaaag ctgatatctt tacgacagat tatggtttag
    25741 aagaagccat tgctatatat gaaaaagatc ctagagaata tcaaaaaatg acaaaaaaat
    25801 tcttaggtaa agacaaagta gaaagcgtag aagcatgtga tttaaaacgc gaattcaaag
    25861 aaggtaaggc tataaatgtc gaacttccaa attctaatca aaactataaa gcagatttag
    25921 tacttttggc tatgggtttt agcggaagtg aagatgctat cgctagtaat tttggagtaa
    25981 gtttggatga gaaaaacaat gtcaaaacaa agaatttcca aaccacacat gaaaaaatct
    26041 ttgcttgcgg agatgctaga aaaggacaat ctttagtcgt ttgggctata aaagacggta
    26101 tagagtgtgc tttaaatata catgagaatt tagcaaaata gtcataaaag tttaaaactt
    26161 ttgcgatgaa gcttgcaaat tccaaatttt gctatcaatt ccttatgggc ttttgtccca
    26221 taagccttat ttttttcaaa ctcataacaa ggaaaatttt tagctaaaaa attcatcact
    26281 ctatctttac ttacctttgc aagtatactt gctgcactta cttgtttgat attggcatcg
    26341 gctttgattt gagtttttat accgctaatg cctaaatttg tattgccatc gtataagaaa
    26401 ttattttctg ttttaaagtg tttttttatg agtgttaaac ccatttttaa acaagcacta
    26461 agccctattt catcaatttt ttctgaagaa aaagcaagaa tgaggtaatc tgaatgaagt
    26521 aagataattt cataaagttc ctcgcgtctt ttttcactca attttttaga atcacaaagc
    26581 ccctcaagat ctttatgcag tttacaagct gccatcatca taggacctgc taaggcacct
    26641 cgtcctgctt catcaatgcc gattaagtta atatcaaatg gagttaaaag ttcgttttct
    26701 tcaaataaag ttttcaaatt ttctctaaga aagggcgaaa aatcgcccaa ggatttagcc
    26761 taaaaattcg cgcttaaagt attctttagg tgctttacat aaaggacagg ctgcaggagc
    26821 ttttttgcca cgatggatat gtccacaaac ctcacaaacc catagttctt ctacttcgct
    26881 attaaagaat tcttcttctt caagcatttt tttaagggct aggtattctc tttcgtgttc
    26941 tatttctact tttccaatcg cagtaaataa tcttgctata gcttttttac cctcatcttc
    27001 agcgatttta gcaaaatttg gatacatggt agtatgttcg tagttttcac cctcagccgc
    27061 tgcaactagg tttttagttg ttacttctaa aggtttgcca tcaacgattt cgtgataagc
    27121 tttaaattca gctcttgcat gccatttttc attttctgct gcttctctaa aatgtcttgc
    27181 aaccgcatgc cacccttctt cttcagctac atctgcaaat aaatcgtatt tatttctagc
    27241 cattgattct ccagcaaaag ctttcatcaa atttattgca gttaaatctt gagtgataca
    27301 ctccatctca acaccacaac agctaagttt tccaccgcct acattttgaa cttctacttc
    27361 attgccgcat tttggacatt tataggattc atattgtctc attttgtact cctttttgat
    27421 aatcaaaaag cattgtatta taaaaaaata cttttgtcaa ttgatgaaaa ttatacacag
    27481 aaagcttact tcttgcaagt aaattttata aaaattaagt tataatatta aaaaaatatt
    27541 aaggagtttt tagtgagaag tgatgcgatt aaaaaagggc atttaaaagc acccaaccgc
    27601 tctttactta gagcatgcgg cttaaaagat gaggattttg acaagccttt tataggtgtg
    27661 gcaaatagct atattgatat tattccaggg cattattttt taaatgaata tgcaaaaatt
    27721 ataaaagatg aaattcgaaa aaatggctgt atcccttttg aatttaacac tataggcgtg
    27781 gatgatggca tagctatggg tcatgagggt atgctttatt ctttgccgag tcgtgaaatc
    27841 attgcaaatt cagttgaaag cgttatgaat gcgcatcagt tagatgcttt aatttgtatt
    27901 ccaaattgtg ataaaatcac tccaggtatg ctaatgggtg ctttaagggt taatgtaccg
    27961 actatttttg taagcggtgg tcctatgcgt tcgggtgtga ctaaaaaggg tgaaaaaata
    28021 agtcttagtt cagtttttga agctgtagga gcatatgagg ccaataaaat cagcgaagaa
    28081 gaatttaaag atatagaatg ttcggcttgc ccaagtggag gctcttgctc gggtatgttt
    28141 actgcaaatt ctatgaatac tttatgtgaa gctatgggta tagctttaga aggaaatggt
    28201 acgatcttag cacttagtaa agaaagagaa gagcttttaa gaaaggctgc aagaagaatt
    28261 tgtgaaatcg ctttagatga aagatttaaa atcaaaaata ttatcaccca aaaagctata
    28321 agaaatgcta tggtggtaga tatggcaatg ggtggaagca caaatacaat cttacatatg
    28381 ctagctattt caagagaagc gggagttgcg cttgatatca aggatttaaa ttttatttca
    28441 agcaaggttg cacatattgc aaaaatcgct ccatcactta atactgttta tatggatgat
    28501 atccataaag cagggggtgt aagtgctgta atggctgaaa tttcaagcag agaaggacat
    28561 attttagagc ttgatgcctt aaccatcaca ggagaaagtt tacaagatcg tttaaaaaat
    28621 gctaaaatca aagatgaaac catcattcgt aaggtagata atgcttactc taaagtaggg
    28681 gggcttgcgg ttttatttgg aaatttagcc gaacaaggct gtgttgtaaa aactgcaggc
    28741 attacaggag agagaaaatt caagggcaaa gctgtttgtt ttaattcgca agatgaagct
    28801 attaaaggta tcattaaagg taaagtgcaa aaaggcgatg tttgcgtgat ccgttatgaa
    28861 gggccaaagg gtggcccagg tatgcaagag atgttaagtc caacttcact tatcatgggt
    28921 atggggcttg gtgcagatgt ggctttgatt accgatggaa gatttagcgg tgcaacaagg
    28981 ggtttaagca taggtcatgt ttctcctgaa gctgctgagg gtggacttat agggctttta
    29041 aaagatggtg atgagataga aatcgatgta gatgcttata tcatcaatgc aaatttaagc
    29101 gatgaagaaa tcacaaaacg caaaaatgac tttgtaatgc ctcaaaaaga agtaaaatcc
    29161 agatggctta gaatgtatca aaaacttgta acaaatgcta gcaagggtgc ggttttagat
    29221 atggaatgaa agagtttctt tcattccgtt cttggagttt ataatcaaaa taagattaaa
    29281 ttttaaaata atccctaaat tctctacaaa tttcgaggaa atttactcca tcgattgtag
    29341 ggctttcgtt gaaaaatcta aacatatctt caaaaccgtt ttcaagttct ttagacttta
    29401 ctccatagct tatgctaagc cctgcttcga taaaagcagc gattttatcg cagtatttta
    29461 aagccttgcc atcaattgct ccaaattcgt tttgattaaa agagcttaaa cttccgctac
    29521 aaagctctat tttagcattt ttataggtgc gattttcaaa ttcatttttg acaaaacttg
    29581 cttcattgct tctgccctct ctaatgccta agatataaga aaattcagcc cttaggtttt
    29641 caggcacaaa gggtaaaatt ctatcattga tcagtttcat ttcataatca ttgatgatag
    29701 tgtgaagtcc gtctatgccg tattttacag ggcttatgat atcacgcgtt aaagattcag
    29761 gtaaatcatg aaataaagcg caataaaaat tgttttcaag tcttttatcg caagctttga
    29821 ttttaagtga ataaaaatat cctaaaatcg ccactacaag catatgtcct aaaacagcag
    29881 tttcaggtat gcgcggggtt tgagcccaac gcttttgaaa acgaagtctt ccgcttaaat
    29941 caattatttt tgcgattttt tgattaagag tgatttttct agctcctata agctcatagt
    30001 aatcttctaa ttcttcttca actttgtttt taatctcatc aatatcattt aaaaaagctg
    30061 aggtttgata aactatgtta aattcccatc ttgtagcaaa atatgaagct gcttttaaga
    30121 taagtctttc tttagcataa gcattaccgt ttaaatacgc ttcaaaacgc tttagaaatt
    30181 ccccatcttc tatatcttct atcataggtt cgattttgct taaaacccaa gcattaactt
    30241 cagctttttt ttgacgcacg atttcatgat acacatcagg gcgtatatca gttaccacaa
    30301 cacgacttaa aaactcaaaa attccaccct ctatgataat tttcatatcc acatcttttt
    30361 ccatttttgc aatgaaataa gctatgataa atttatgcgc ttgtttatca agctcgacta
    30421 aatttgccat tcttggataa tcattccaac gactgatgga agcggcttta aaaatgtgtt
    30481 ctatgagttt tatgtttatc atgcttttgc ctttttgcaa tttaaattta aaaattttcg
    30541 ttaaaattgt gaaattatag caaatttaag gataaaaatg agtaaaaaag cactttgtat
    30601 cataagtggc ggtatggata gtactttgtg tgcttatctg gccaaaaaag aaggttatga
    30661 aatcatcgct ttgcattttg actatgaaca acgcactcaa gaaaaagaaa aagaatgttt
    30721 taagcaaatt tgcaaggctt taaaagtaga aaaatcttat attttagatg tgagttttat
    30781 caaagatata gggggcaatg ctttaaccga taaaagtata gacatcccta aaaatgagct
    30841 ttgtacaagc gatactccac ctatcactta tgtgcctttt cgcaatggaa ttttcttaag
    30901 tatagcagga tctttggctg aaaaggaaaa ttgtgagagt atttttatag gggtggtaga
    30961 agaagatggc agtggttatc ctgactgtac tgatgagttt atacaaaagg cacaagaatt
    31021 tatcaatgaa ggtacgagta agaatttcaa agtttgtata aaaactccgc ttgttagact
    31081 aaacaaagct aaaattgtag aactagcctt aaaagaaaat gtacctttag aacttacttg
    31141 gtcttgttat gagagtgaag atgaagcttg tggggagtgc gatagttgtt tgcttcgttt
    31201 aagaggtttt gaaaaagcag gatttaaaga taagattaaa tataagtcct agttttcact
    31261 aggacttaaa gcttagttta aagtataaag cttgtttgct ccatcttgat aagaaagaat
    31321 attgattttt ccatctttaa agaaaatgct tctagcatta gtgatagagc ttgggaaagc
    31381 gatagttttc actacttctt ctttgactgg atcaattacg gcaatcacat tgtgattttt
    31441 gctaagtgca taaatttccc catctttaaa agtcatagaa gtgatataaa gatcacccaa
    31501 agttttaccc tctttaagct ctgcttttgg agtaaattct cctgaaagaa cacgatcttt
    31561 taaagaaact ttagagatta caaaagtttt agcgtctttg ttgtttggaa cagttgcaag
    31621 ataaagataa tgatcatctg ttgtcatact tgctacatgg ttgaattttg ctctaactgt
    31681 atcaagtctt ccgcgaccta aactttcgcc ttgaccttca aatttatcat ttcctttaat
    31741 aaaatctgca tattgtaaag tttcgtccgc atttggattt ttggcaaatc ttaggaaaga
    31801 tttattagat cccatgagaa gaaatttatt ttctttataa ggaatgatac ctatgatagg
    31861 atcgatagta gctgaaaaat aaggatcaag ctcaaaacct tctttaacgc taaaattatt
    31921 atctaagaaa gccacatccc atttagaact tgctacaaat tcatcattaa tataatcaag
    31981 agtattgatt gctttatcaa aatttatggt ttgttcattg ataattttaa gctcatcgtc
    32041 aatttctgca aatggagaat tatttgtatt attatcaaat tttataccca atttttcact
    32101 cgcaggtgca aaagcataat caggagcttt aacatcacgc tttcctaaga aagaaatatt
    32161 ttgccataaa ccattccaac cctctgtgct ccaaatgata tattttggat taagactaaa
    32221 tcttactgga tcaccttgtc ctacataagg aggaattcct gtgcttacaa aagcttgaaa
    32281 aacatttgat gcaacgataa gggtgctgat taaaactgct gcgaagctaa atttagtaaa
    32341 ttttctaaat ttttcaccgt ttaattcttt gtcaaaagat ccaaatttag gagcaaaagc
    32401 aaacatcaca cccaaaagca agactacagc ccaaaagact acttcagccc aaaaataagt
    32461 atggatacca aaaactgcca aaccaaaacc ttgatctaaa tctctatgag cgtgattgcc
    32521 ataatgtgca aaagactgat aaagacctac tgcagtcatg attaaaagag cggcaaggta
    32581 tttgcctttc ataccataac gcacgataaa aagtgctata actccgataa aaatcatcgc
    32641 ttctctttgt ccccaacaaa gagtgcatgg gctatcaccc aacatataac caaatacaaa
    32701 atttgcaatc cctacaggca aaagaataat caaaaagcct gctaaacaca taagagtgta
    32761 gaaatttttt gttttattta tttcgttcat tctctagcct ttctttacag attcattatc
    32821 gttaaaagcg cacctgtttt gtggccaaca tagaaaaaaa ccattaaaag ccaagctacc
    32881 attaccaaac caaaagccaa attttctttt tctggttttt tgataatcag tatcaaggcg
    32941 attaaaacta ataaaagctc taagaactcc ataatttctc cttttgattg aacttattaa
    33001 aaattgtttt aataagagtt tatgatatta tattacaaat ttctcctaaa ttttctatta
    33061 cacagcgtat ttcatcacct tttttaagaa aaacgggcgg atttaaaccc attcctacac
    33121 cgcttggggt tcccattgat atgatggtac cggcttttaa gagcattcct gagcttagtt
    33181 cctctaagac atatccgatg tcaaaaataa aaaattttgt attggagttt tgtcgtaatt
    33241 ctttattgac ataacttttc aaatgaagtt caggcggata agcaatctca tcaacacttg
    33301 tgatataagg ccccatgata gtacttccct caaggctttt tgcgcggtaa aattgcttgt
    33361 ggcgtttttg gagatctcgt gctgaaattt cattgatgat ggtataacca aaaatataat
    33421 cctttgcatc ttcagctttg attttataag catctttact taaaatgaaa gcaagctcgc
    33481 attcatagtc taattgagaa gtaacatcag catgtaaaga tatgctgcca aaaggagctg
    33541 tggcttgatt gcagcgtttt ccaaaatata caggatattc tctttcttca aatttttcgc
    33601 ctttaaattg tgcagattct ttggcatgat ctaaaaaatt gatcccaaga catatgatat
    33661 cttgtcgagg ttctatgata ggagctagat aatcttcttt tggaatttca taagctgttt
    33721 tagagtctaa atctttaaac ttatgtttaa attcatcaaa atttataatc aattcattca
    33781 tatcacgaac attgatatca agatcggcta aatttacgac ctttccactt gagttaaaca
    33841 cccctagaat agctttttga ttaaatttaa a
//
LOCUS       DBBXOW010000009        31957 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.009, whole genome shotgun sequence.
ACCESSION   DBBXOW010000009 DBBXOW010000000
VERSION     DBBXOW010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31957
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.009"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            14..313
                     /locus_tag="ACJE1S_000433"
     CDS             14..313
                     /locus_tag="ACJE1S_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG0806003.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGAKADKVYLNK
                     VPALKSISSAERLQYMKEYSEGKRNAYGQGAIMKINLKGLTEEDFKAIEAYIETL"
     gene            complement(343..543)
                     /locus_tag="ACJE1S_000434"
     CDS             complement(343..543)
                     /locus_tag="ACJE1S_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein"
                     /protein_id="HGG0806004.1"
                     /translation="MNSVIMMMIGVSILGFFIILATLLWGIRTKQFDDDYKFTTLNDD
                     EDALRDAIELEKRKKEALEKRK"
     gene            complement(536..2899)
                     /locus_tag="ACJE1S_000435"
     CDS             complement(536..2899)
                     /locus_tag="ACJE1S_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HGG0806005.1"
                     /translation="MIMKCEHCRLDYQKSQMIEAKGKFFCCRGCLSVWEILHESGLDE
                     FYERLGNNALKPVSLEFSNKNYDEFITKTKEGFSEIYLMIHGIECSACVWLNERVLTK
                     QEGILELDINHLSHKARIVFDEQSVSLAQILNLIESIGYKASAYDPSKNSKKADLIKR
                     EFYSKLIVAIACVMNIMWIAVAKYAGFFSGMDRDIKDILNFAEFILCSPVLFYTGSNF
                     YKSAFKALKMRSLNMDSLVISGASLAYGYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTVDGLNDFLQNEVLVFNGKDFEPKDVQKVNIGDRILLKSGDKILIDG
                     ICKKGEASIDTSSLSGENEPCFVGVGSVVNSACIVLDGSIEYEANKLYKDSKLNQIIR
                     LLEFASTKKARLESLVSQISAYFSRTILTLALLCFFFWLFYHQESVEISLVHAISVLI
                     IACPCALALATPVSNLIALGQALKRAILFKDSSVVEKLSKCDIAVFDKTGVLTQTQLK
                     IAEVFLDERLNLNEFYSFVSLSNHPIAKSVAQFLQDKNAKLLNLDFKGLSNIQAKGIK
                     ACLDNTLFLGGSSKFLEDNGIKCKKEFNNSHFIFARDNEILAYFEFSSVLREGAKELI
                     SYLKQAKIDTMILSGDNERAVEKIAKELGITSFYASCLPQDKMQAIENLSHKKKVLFV
                     GDGVNDALALKYAAVAISLREGSDLAIENSDILLLKNDLLSLKYAIKLSKDTYKIIKQ
                     NLILSLAYNAFTIPLAFLGLINPLIAALSMSFSSIMVILNALRIKNE"
     gene            3012..4310
                     /gene="rho"
                     /locus_tag="ACJE1S_000436"
     CDS             3012..4310
                     /gene="rho"
                     /locus_tag="ACJE1S_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HGG0806006.1"
                     /translation="MEKEKKQHQRTHIPVEGYKIEDLKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRILDLFTPIGKGQRGLIVAPPRTGKTELMKELASAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNISDRRIYPAINIIKSGTRKEELLQGVAELQ
                     KIWAIRSAISQMDDIEALKFLYSKMLKTKDNVELLSIMNE"
     gene            4313..5869
                     /locus_tag="ACJE1S_000437"
     CDS             4313..5869
                     /locus_tag="ACJE1S_000437"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HGG0806007.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSTSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCDNGPSDTPCGTCKQCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPGYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQNEILNHLKEILNKENVKFEEEALKFVARSGNGSLRDTLT
                     LLDQAIIFCQNDISTSKITDMLGFLDPAKIKEFYHAILTKNKDRVFDFLEELKDYEAS
                     SVIDEMLFYLKESFFAKSSEFSTLIYERFFRILARAKNLICDDDGFTLCVMAFMMMEA
                     SHLKEIDTQINEIQKNLTNTNSNLEKQEVKTSIVLEIQKSSTIKNAYEILLEKIYDRD
                     YELGECFKQSTQFVSYENEILTISSNAQGSNRDKLNKGFKLIQELFRNHFGSNAKIVV
                     QKAIIIDESKLQSLTQELPQQNNEAQAPKKIDLHSSFNELKQGAKKFDPQEDTKEALR
                     EYFGEPKIEN"
     gene            complement(5881..8004)
                     /locus_tag="ACJE1S_000438"
     CDS             complement(5881..8004)
                     /locus_tag="ACJE1S_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002833017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG0806008.1"
                     /translation="MQEFRVKIGKMTCVNCSNAIERACKKIQGVSDASVSYVNSSGVF
                     LLEDEARSQDVIEKIQSLGFEILENEQNLEEYRKKELISLRKNLLLSIVLSALIMYFE
                     MFDTSFLSQNMQMLLSFFVIFYCGRTFFSHAIKGLKNWNLDMNTLIALGCISAFAYSF
                     CIYLNLFEDEKHLYFSGAAMIISFVLLGKFLETNAKFKALNYQKRLNEIDIKKAKILN
                     EAGELNEILSAFVKNGDIIVVREGESVAVDGVVIQGKAEIDTSFLSGEFLPSSVRVDD
                     EIKAGSILLNGNLHIKASKKAMDSTLEQIKDLVFKAGNVKTPLENSVDRISRYFVITI
                     IAFALAVFVFWSFKAGVSEAFLHACAVLLISCPCALGLATPIALITAQGAAMKNFILI
                     KNPAALENLNKIKTAFFDKTGTLTQNNLELFRHNLNAKDFQMLTLIESSSSHPIAKAI
                     FKASKIKAQILKGSSEIFIGKGVKYIEENEEYLLGNLKFMQESGVKNLEKADEFLQSL
                     KEEALICVYFAKNGECLGVLTLKNTLKEGAKELIEDFKNQKIQSIILSGDNEKSVQSV
                     ANLLGIADFKAGLLPEEKLQIIKEHKQNSLFVGDGINDAAALNLASASMSFKEGSDLA
                     KNAGDFILMKDDLRLISWCFKLAKKTKNIIKLNLFWAFFYNTLCIPIAAGFVPFITLS
                     PHLAALAMCFSSLCVVLNSLRLRKV"
     gene            complement(8004..8207)
                     /locus_tag="ACJE1S_000439"
     CDS             complement(8004..8207)
                     /locus_tag="ACJE1S_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HGG0806009.1"
                     /translation="MKFKVANINCQNCANLIKNSLEDIFGEIKIDLDANPRTLSLNLD
                     SSREEEFKKELGELGFEVLEKIE"
     gene            complement(8197..9138)
                     /gene="czcD"
                     /locus_tag="ACJE1S_000440"
     CDS             complement(8197..9138)
                     /gene="czcD"
                     /locus_tag="ACJE1S_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HGG0806010.1"
                     /translation="MYEFLLHEPLVNKSKHNHEDHSHEHHHADARSVDKKILKISLLM
                     TFSMMLVQFIYSLLSNSLALLSDTLHMFSDVFALTLSFLAIIAIEKWQDHQKTFGYFR
                     LEILVAFINALTIILSAIFIIYEAIEKLINPSSIDAKTMIIVAVLGFLVNAINAFMMF
                     RGANLENVNMKSAFLHMMSDLLGSLVVIIGGIAVYFSGIVYIDTILAIILSLLLLRWA
                     IILLKQSVNILLETSPVDIEEVKQALLLNSKVEEVIDLHITQITNKMLVASMHLRVNI
                     DDLKEFEQLSYDLSHDLLHRFEIGHITIQPLRSKNEI"
     gene            complement(9213..9482)
                     /locus_tag="ACJE1S_000441"
     CDS             complement(9213..9482)
                     /locus_tag="ACJE1S_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HGG0806011.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERST
                     PNTASFNQAPRQEPRYNDHSYSHQSHDHYYKKKKRESWLGELFDF"
     gene            complement(9540..10034)
                     /locus_tag="ACJE1S_000442"
     CDS             complement(9540..10034)
                     /locus_tag="ACJE1S_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HGG0806012.1"
                     /translation="MIEFILKDMFFAAMAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLIEYFHFETLAIATFVASFCVGCLGIALAKIIKTPAEVIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTLSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(10031..10807)
                     /locus_tag="ACJE1S_000443"
     CDS             complement(10031..10807)
                     /locus_tag="ACJE1S_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HGG0806013.1"
                     /translation="MQKPDIQSLTNFLIDYTKTLLSAGTYTARVAKCVGRIAQVYGYE
                     ININFFFHHITLNIVDIEDNSIQRTYVIPNHHAHINFKLIFELSALSWAIYDHKYELE
                     KAKSAFNAISIQKKHSYVLNLLFVSIANSGFCRLFGGDFGAGVLVFFATFLGLLLRFA
                     LTKIKIDLRIQYILCSFVSSWFVFLGLDMGYTNTSDAALGSSILYLIPGVFFINSIID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISKFGILQ"
     gene            10873..11796
                     /locus_tag="ACJE1S_000444"
     CDS             10873..11796
                     /locus_tag="ACJE1S_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HGG0806014.1"
                     /translation="MSKIGIVGLGFVGAASAYNIVVQNICSELYLYDIKQDLALAHAR
                     DLEDMSAIHSSYTRIIHATNLEQLASCDIIILAFRKENLKELSSRLVELQNNITELKD
                     IVLSLKHANFKGKYIVATNPNDTITYYTQILSSLPKNHVFGSGTNLDSSRLKKILAKD
                     LDLNPKDITAYMIGEHGDSQFAALSTASVLGQNLLTFCDKMGKKLDIENIEKAVVNEG
                     YFIYKRKGRTEFGIGTSCANLAKAVLEDRKSLHPVSVVFDDLAFSLPAIIGKNGVEKI
                     FELDFNEREKIKLENSKLQIKNAIQSVSDKI"
     gene            complement(11793..12398)
                     /locus_tag="ACJE1S_000445"
     CDS             complement(11793..12398)
                     /locus_tag="ACJE1S_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG0806015.1"
                     /translation="MQEIIHFIIETASDWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDIVFCILSGVLGSVLGALINYYICFFWGKKFVLRWGKYFGINEAKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLVNFVLFTALGSAIWVSILAFLGYY
                     IGENEELIKAYLTQILIVIIIFIVLASLIYIKIKKPFAKKA"
     gene            complement(12563..13045)
                     /locus_tag="ACJE1S_000446"
     CDS             complement(12563..13045)
                     /locus_tag="ACJE1S_000446"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG0806016.1"
                     /translation="MIKTIETSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKIIDIKICDKI
                     "
     gene            complement(13055..13762)
                     /locus_tag="ACJE1S_000447"
     CDS             complement(13055..13762)
                     /locus_tag="ACJE1S_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HGG0806017.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFARKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIETKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            13871..14212
                     /locus_tag="ACJE1S_000448"
     CDS             13871..14212
                     /locus_tag="ACJE1S_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HGG0806018.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIVLSIVG
                     IIMINIGEVKE"
     gene            14212..14520
                     /locus_tag="ACJE1S_000449"
     CDS             14212..14520
                     /locus_tag="ACJE1S_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HGG0806019.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKNKIWGLAAIVNAILAFF
                     LLSFSLKYAPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(14538..16130)
                     /gene="argS"
                     /locus_tag="ACJE1S_000450"
     CDS             complement(14538..16130)
                     /gene="argS"
                     /locus_tag="ACJE1S_000450"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HGG0806020.1"
                     /translation="MKNIIFNEIKKILECNFALENPKDKNLAHFATPLAFSLAKELRK
                     SPISIANELAAKFQEHSYFDKVEALNGYLNFRLSKTFLNELANKALQNPNEFSKGEDK
                     TESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLL
                     GLSILLSVKESILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDNYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSLK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(16141..16380)
                     /locus_tag="ACJE1S_000451"
     CDS             complement(16141..16380)
                     /locus_tag="ACJE1S_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HGG0806021.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     SNEDEAAKNAHKIEEKQNTTNHANTDANIDEVKKS"
     gene            complement(16382..16999)
                     /gene="gmk"
                     /locus_tag="ACJE1S_000452"
     CDS             complement(16382..16999)
                     /gene="gmk"
                     /locus_tag="ACJE1S_000452"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HGG0806022.1"
                     /translation="MSAFILLVSGPSGAGKSTLLKKLFDEFQEELYFSISSTTRLPRE
                     GEQHGVDYYFITHDEFQQGIDKEQFLEWAKVHENFYGTSLEHTQNALNDGKIVVFDID
                     VQGFKIVKKKMAEKIISVFITTKNKDELKKRLIKRNTDTILQLEKRLQNASDEMKELN
                     EYDYFIINDKLEESYEALRAILIAHKFKTKGQNLEQIQNIWNKGE"
     gene            complement(16996..18549)
                     /locus_tag="ACJE1S_000453"
     CDS             complement(16996..18549)
                     /locus_tag="ACJE1S_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806023.1"
                     /translation="MKILLLNENPVVSRLISLSAKKMSYDFEEINAYDENLGHYDVII
                     VDSDTPAPLKILKEKCDKLIFLAPRNQSVDIDALILHKPFLPTDFLNLLNQENLKIAD
                     DIILPIEEAENPYANISLDLDGLNLDDLPDENTEDTQENELSMEENLESLALYDMEEE
                     TNQKEIASENTDKELNLDDLSLDEDQEENDASEQTTANHIEEKNEDEQALEVAFQDDI
                     LNDKTSEENEEEFEIQEQDTQEQDANQDEQDKIEDTQELEDQVDNLNGDLVQDNENSE
                     AQEAIVNNNLDAEEAQPEVLEDAEEPSKTQLQDFITDDFPIVEEQERKIDFDDIPEDA
                     EFLGQRKEEDEAVEDFLPVVEDQENLNEHDDFEEMSSLSTQDQIKEELAQLDELEYDI
                     DSDDSIKVLEDFKEEPILDDKDLPNNDEEIVVPKLQINDFDSLKESDIQEALGEKIST
                     LEDNKSEKLKIKEDQLASEAGEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNINI
                     SISFNEDKN"
     gene            complement(18605..19372)
                     /gene="fliR"
                     /locus_tag="ACJE1S_000454"
     CDS             complement(18605..19372)
                     /gene="fliR"
                     /locus_tag="ACJE1S_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HGG0806024.1"
                     /translation="MEFVNYLGDKNVATFMLLFARMSGLIVFFPFFSHNSIPMIIKTT
                     FALFLTMYLFPLAKLEILHLDSFFIIQLLSEIVFGMIAGLMLQIVFAIVMMAGEQIAF
                     TMGFTMASVLDPSSGTNMPITSQILHLIALLFFLAFDGHHLMLLFLSHSLGYINLGGF
                     YPHENLMHYLNMGMLNIFIIGFTMSFPILGISLLADTIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKDLILEVFTHMQTLFFA"
     gene            complement(19359..19994)
                     /locus_tag="ACJE1S_000455"
     CDS             complement(19359..19994)
                     /locus_tag="ACJE1S_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806025.1"
                     /translation="MELLRAENLGHSFDYPLFENLNFSLNQKDCIAIQGSSGCGKSTL
                     LHIISSLLKPNKGEVFFKGQNLYKISENERLKIRRYDLGIIFQTHYLFKGFSALENIE
                     LASVLSNQDLDEKILKKLGIHELLKQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLVSYAKENDAALFFVTHDSKLAQFCDKTYILNTNGIC"
     gene            complement(20004..21077)
                     /gene="tsf"
                     /locus_tag="ACJE1S_000456"
     CDS             complement(20004..21077)
                     /gene="tsf"
                     /locus_tag="ACJE1S_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HGG0806026.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QNNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFASLKASANGVVNGYIHT
                     NGRVGVIIAAACDNAEVANKSRDFLKQLCMHIAAMKPSYLSYEDLDIEFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPKFASRKQLSDAILKEAEENIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTIEQVIAEKEKELGGKIKIVEFI
                     RFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(21077..21868)
                     /gene="rpsB"
                     /locus_tag="ACJE1S_000457"
     CDS             complement(21077..21868)
                     /gene="rpsB"
                     /locus_tag="ACJE1S_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HGG0806027.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALPSEEKEITDEEKKEVLDEAMSEEDFNGEQE"
     gene            complement(21985..23148)
                     /locus_tag="ACJE1S_000458"
     CDS             complement(21985..23148)
                     /locus_tag="ACJE1S_000458"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG0806028.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFYVGNQPAKFSLIFKE
                     KIPLLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNKEDILSKIAQ
                     KEESKNIKSHYDIGNDFYRLWLDDTMSYSCAYFKTSSDTLYEAQINKIEHTLKKLDLK
                     PNEKLLDIGCGWGWLSIMAAQKYGVKVVGVTISEEQCKKAQERVRELKLEDRVEIRLQ
                     NYQDLEFEDYFDKVVSVGMFEHVGKENLGLYFMKAKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRIHYAKTLDIWSENFNQVLPQ
                     VREKYDEEFVRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKEYIYK"
     gene            complement(23275..24399)
                     /locus_tag="ACJE1S_000459"
     CDS             complement(23275..24399)
                     /locus_tag="ACJE1S_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG0806029.1"
                     /translation="MRELKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDYAAED
                     TAYAKGIIAEKEIALEDAKKSNDAKRIESAQQDLDKAKENLAKVEELWADVAKIDFTK
                     GNAAKGKEFFNNNCFACHGVKEDDIAANITDSSLGVIPPDLSSAGVIFDEKFLAALIM
                     NPALALKVDHKFGDAFIMTAYNSEVSGDSEELVNANIADVIAYLKEVGLKFEAKENAT
                     IKQEAELKYSKIEDANEKSALVEKEIAFAKDKSTFIEACGRCHDIKYDNFFTPSNHND
                     LANYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEDAQVKVVSYLE
                     KVGDSKKEERESTGIYIMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(24396..25646)
                     /locus_tag="ACJE1S_000460"
     CDS             complement(24396..25646)
                     /locus_tag="ACJE1S_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HGG0806030.1"
                     /translation="MAHIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFTVLFITGLLLVMYYKPDTALAFDSVNKTIMQEVEYGWLWRHMHGVAASVIF
                     LIIYIHMLTGIYYGSYKRGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPLIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEIAEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYICLFMIFFFYLVSFKF
                     GFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     IIFFLLPWLDRSDVVKPAHERPLFFIWFWVLLIDLIVLTIYGKLPPTGVNAWVGFYAS
                     IIFLLLFIVVLPVITIMERKGAKQ"
     gene            complement(25648..26151)
                     /gene="petA"
                     /locus_tag="ACJE1S_000461"
     CDS             complement(25648..26151)
                     /gene="petA"
                     /locus_tag="ACJE1S_000461"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HGG0806031.1"
                     /translation="MATSESRRSFMGFAFGTVAAVGGVFSLVAVKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDPNMEKDTKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYHASEQLFKCACHGGEFDTSGKNTFGPPPRPLDIPPFKIDGTKLVLGEEGPEY
                     KKMTEEA"
     gene            complement(26241..27509)
                     /locus_tag="ACJE1S_000462"
     CDS             complement(26241..27509)
                     /locus_tag="ACJE1S_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HGG0806032.1"
                     /translation="MLASVIFIITLILLFWRPWNLPLWLIAIFGALFAFIFKLVNLED
                     ASFVFDLVWDSSLTLVGLIILSFSLEVLGFFSFIAIRILRLSKLKNSHAIHTKKLMLF
                     MLAFVFCLSALFGNDGAILIITPIVFALFSTLKNYKESAILSAFLLSVSFLCDASSNA
                     LIISNLTNIITANYFNLDFLEFAKTMFLPNLFVLLSTIIMVFLIFAKILPKGLEINIS
                     SNDCISVKLFIFCVIYLIFFVSSFFIGEIYNLNASFFAVSGALLFWFFVCFLKKREAL
                     KIIKNVPWGIFAFSFGLYMVVFALHKVGISDILIFIYDILAQNAITAIFGTGFISAFL
                     SSVFNNLPMALIGDLALKNFPQSMVYAHLLGVNIGPKLTPIGSLATLLWLGLLAKKGI
                     EISFWKYCKFGFLITLPVLTCSLFALVLQY"
     gene            complement(27509..29368)
                     /gene="mnmG"
                     /locus_tag="ACJE1S_000463"
     CDS             complement(27509..29368)
                     /gene="mnmG"
                     /locus_tag="ACJE1S_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HGG0806033.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVRGSRAQIDMDKYRIV
                     ARNKLLKLKNLEISQEQVCELIYENGSVVGVKTNLQNTYEAKKVILTTGTFLNGLIHV
                     GENKLTAGRVGELASVNLGQNLLSTSLKMGRLKTGTCPRVDAKSIDFDVLEIQYGDQN
                     PKAFSFRTKNFNPIQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSVKGFEEAKITRFG
                     YAIEYDYIEPTELYHTLETKKIKNLYCAGQINGTTGYEEAAAQGFMAGVNAVLALDNK
                     EPFILRRDEAYIGVLIDDLVIKGTKEPYRMFTSRAEFRLLLREENAIVRLGKYGKELG
                     LLEDESYQFIENIRLNTQKGLELLLEKEFTPNTENNAFLASIGEEKITSIVNLQKIVA
                     RSSFDIEKLKKLNTIFENMDEYSLREILNEAKYYHYIAMQKSQVEKMKNLIDMKIPSD
                     FDFTSVSGLSNEVVEKLQKHKPLTLFAASEISGITPAALDILQIYIKMQKKKS"
     gene            complement(29455..29952)
                     /gene="cetB"
                     /locus_tag="ACJE1S_000464"
     CDS             complement(29455..29952)
                     /gene="cetB"
                     /locus_tag="ACJE1S_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HGG0806034.1"
                     /translation="MSREIFLQEDSLITSKTDLKGRIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMREGKEIFAYVKNKTKDNNYYWVFANVTPSIDINNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRVEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAR"
     gene            complement(29970..31349)
                     /gene="cetA"
                     /locus_tag="ACJE1S_000465"
     CDS             complement(29970..31349)
                     /gene="cetA"
                     /locus_tag="ACJE1S_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HGG0806035.1"
                     /translation="MVKNGLLLTIFLSIIGILGAIFFHIYVGVIIFILIAVLMIYLFR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            complement(31470..31955)
                     /gene="cetC"
                     /locus_tag="ACJE1S_000466"
     CDS             complement(31470..31955)
                     /gene="cetC"
                     /locus_tag="ACJE1S_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HGG0806036.1"
                     /translation="MFLAKDALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKSHNI
                     VRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDANGNIINYY
                     SVRRAPNRKSISIIEEVYKILLEKEKKSGINAGVSALMDIVSSYKMTYNELIFNLQEN
                     N"
BASE COUNT        11033 a         5875 c         4278 g        10771 t
ORIGIN      
        1 caaggagaat ataatgaaaa aattattagt agtttctgct ttagcatgtc ttggcgtatc
       61 agctttcgcc gcagatggag ctacactttt taaaaaatgt gcagtatgcc acggcgcaaa
      121 agcagataaa gtttatctaa acaaagttcc agcattaaaa agcatctctt cagctgaaag
      181 acttcaatat atgaaagaat actcagaagg taaaagaaat gcttatggac aaggcgctat
      241 catgaaaatc aaccttaaag gtttaactga agaagatttc aaagctatcg aagcttatat
      301 cgaaacttta taattttaag gctttcaaaa tttagaaagc ctttattttc tcttttctaa
      361 agcttctttt tttctttttt ctaattctat agcatcgcgc aaagcatcct catcatcatt
      421 tagagtagta aatttataat catcatcaaa ttgtttagtc cttatccccc aaagcaaggt
      481 agccagtata ataaaaaaac ccagtattga aacccctatc atcatcatga ttacactatt
      541 cattttttat ccttaaagca tttaaaatca ccattatact actaaaagac atagaaagtg
      601 ctgcaattaa aggattaatc aaacctaaaa atgccaaagg tatggtaaaa gcattgtaag
      661 ctaaagaaag aattaaattt tgcttgataa tcttataagt atccttagaa agcttaatgg
      721 cgtattttaa agaaagcaaa tcatttttta aaagcaaaat atcactattt tcaatcgcca
      781 aatcactccc ttctcgcaaa gatattgcca cagcagcata ttttaaagcc aaggcatcat
      841 tgactccatc gcctacaaat aaaacttttt tcttatgact taaattttca attgcttgca
      901 ttttatcttg aggcaagcag gaagcataaa aagaagtaat tcctaattct ttggcaattt
      961 tttcaaccgc tctttcatta tctccactta aaatcatcgt atcaatctta gcttgtttaa
     1021 gataagatat aagctcttta gcaccttctc ttaatacgct tgaaaattca aaataagcaa
     1081 gaatttcatt atcacgcgca aagataaaat gagaattgtt aaattctttt ttacatttta
     1141 tcccattatc ttctaaaaat ttcgaacttc cgcccaaaaa taaagtatta tcaagacaag
     1201 ctttaatgcc ctttgcttga atattgctca aacccttaaa atccaaattt aaaagctttg
     1261 catttttatc ttgtaaaaac tgcgctacac ttttagcaat aggatgattt gaaagcgata
     1321 caaagctata aaactcattt aaatttagcc tttcatctaa aaaaacttca gctattttta
     1381 attgggtttg agtaagaact cctgttttat caaatactgc tatatcgcat tttgaaagtt
     1441 tttcaaccac gcttgaatcc ttaaataaaa tcgctctttt taaagcctga cccaaagcga
     1501 taagattgct tactggagta gctaaagcta gagcacaagg acaagcaatg attaaaacag
     1561 aaatcgcatg aacaagtgaa atttcaacac tttcttgatg ataaaacagc caaaagaaaa
     1621 aacaaagcaa ggcaagagtt aaaatggtac gagaaaaata agcagaaatt tgagaaacca
     1681 agctttcaag tctagctttt ttggtgctag caaattccaa aagccttatg atttgattta
     1741 atttagaatc cttataaagc ttatttgctt catattctat acttccatct agcacaatac
     1801 aagctgaatt tacaacacta cccacgccca caaagcaagg ctcattttcg ccacttaaag
     1861 aagaagtatc gatacttgct tcaccctttt tgcaaattcc atctatgaga attttatccc
     1921 cacttttaag taaaatccta tctccgatat tgaccttttg aacatcttta ggctcaaaat
     1981 ctttgccatt gaaaaccaaa acttcatttt gtaaaaaatc atttaggcca tctactgtat
     2041 ccaaagcgcg ttttttgcta aacatttcaa gatatttacc tataaaaaca aagcaaataa
     2101 tcatagccac agaatcaaaa tacacctcgc ctactctaaa aaacatcgcc cataaagagt
     2161 atccataagc caaacttgct ccgcttataa ccaagctatc catatttaaa ctacgcattt
     2221 ttagagcttt aaaagcactt ttataaaaat ttgaacctgt ataaaaaagc acaggagagc
     2281 aaaggataaa ttcagcaaaa tttaaaatat ctttaatatc cctatccata ccgctaaaaa
     2341 atcccgcata ttttgctact gctatccaca tgatattcat cacacaagca atggcaacta
     2401 tgagcttaga gtaaaattct cgcttgatca aatctgcttt tttggaattt ttagatggat
     2461 cataagcact ggctttatat cctatacttt cgataagatt taaaatttgc gccaaagaaa
     2521 cactttgttc atcaaaaaca atgcgtgctt tatgcgaaag atgattgata tctaactcca
     2581 aaattccttc ttgtttggtt aaaactctct cattaagcca aacacaagcg gagcattcta
     2641 tgccgtgtat catgagataa atttcgctaa aaccctcttt ggttttggtg ataaactcat
     2701 cataattttt gttagaaaat tccaagctaa ctggctttag tgcgttattg cccaatcttt
     2761 cgtaaaattc atccaagcca ctttcatgta aaatttccca aacactcaaa cagcccctac
     2821 agcaaaaaaa tttaccctta gcttctatca tttgagattt ttgataatct agtctacaat
     2881 gttcacattt cataatcatt ctttaaaaaa atatttttta taattataga caaatttgac
     2941 aaaaagtata tttttttact aaaatcacgg ttttaatttg ctacaaaatt actgctttct
     3001 tgcgaggact tatggaaaaa gaaaaaaaac aacatcaaag aacccacatt ccagtggagg
     3061 gttataaaat tgaagactta aaactacttg acttagaaaa cctagttaaa atagctaatg
     3121 aatgcgagat agaaaatcct agagaatttc gccgtcaaga actcattttt gaaattttaa
     3181 aagcccaaac caaaaagggt ggttttatcc tttttacagg aattttagaa atttcttcag
     3241 aaggttatgg ctttttaagg ggtatggatt caaatttaag cgatagtgtc aatgatgctt
     3301 atgtttcaaa ctcacaaatt cgtaaatttg ctctacgcgt gggcgatata gtaactggac
     3361 aagttagaga gcctaaggat caggaaaaat actatgctct tttgaaaata gaagcgatta
     3421 attatttgcc tttgcaagaa gctaaagaaa gacctttatt tgataactta actcctattt
     3481 ttccaacaga aaaaatcaaa ctcgaatacg atgctatgaa attaactgga agaattttag
     3541 atctttttac ccctataggt aaaggacaac gcggactcat cgtagcaccg ccaagaacgg
     3601 gtaaaacaga acttatgaaa gagctagcaa gtgcgattgc taaaaatcat cctgaaatgc
     3661 atttaatcgt tcttttagtc gatgaaagac ctgaagaggt tactgatatg caaagatgtg
     3721 taaagggtga agtgtttagc tctacttttg atttgcctgc ttataatcat gttcgcgtgg
     3781 cagaactagt tatcgaaaaa gcaaaaagaa tggtagaaac aggcaaagat gttatcattt
     3841 tgctagatag tatcacaagg cttgctagag cttataacac tgcaactcca agcagtggaa
     3901 aggtactaag tggtggggta gatgctaatg cacttcataa acctaaacgc ttttttggtg
     3961 cagcaagaaa tatagaaaat ggcggatctt tgaccatagt agcaactgca cttatcgaca
     4021 caggttcaag aatggatgat gtgatctttg aagaatttaa aggaacgggt aatagcgaaa
     4081 tagtcttaga tagaaatatt tcagatagaa gaatttatcc tgcgattaat atcatcaaat
     4141 ctggaactcg aaaagaagaa cttttacaag gagtggcaga actacaaaaa atttgggcta
     4201 ttcgttcagc gatttctcaa atggatgata tcgaagcgct taaatttctt tattcaaaaa
     4261 tgttaaaaac taaagacaat gtagaacttt tatctattat gaatgagtag agatgcttca
     4321 agccttagcg attaaataca gacctaaaac ctttgatgaa ctcataggac aaaaaacagt
     4381 cagcacaagc ttaaaatatg cattaaatca caatcgccta gctcatgctt atctcttttc
     4441 aggcttacgc ggaagcggta aaacttcaag tgccagaatt ttttctagag ctctagtttg
     4501 tgataatggc ccaagtgata ctccttgtgg aacttgcaaa caatgccttg ccgcacttga
     4561 aggtaaacat atagacatca tagaaatgga cgccgctagc aatcgcgggc tagaagacat
     4621 acaagctctt attgaacaaa ctaaatatac cccttctatg gcaagattta aaatctttat
     4681 catcgatgaa gtgcatatgc taacacctca agctgctaat gcacttttaa aaacactaga
     4741 agaacctcca ggctatgtga aatttatcct agcgaccacc gatcctttga aattgcccgc
     4801 taccgtgctt tcaaggacac aacattttcg cttcaagcaa attccgcaaa atgaaatttt
     4861 aaatcattta aaagaaattt taaacaaaga aaatgtcaaa tttgaagaag aagccttgaa
     4921 atttgtcgca agaagtggaa atggctcttt aagagatact cttaccttgc ttgatcaagc
     4981 tattatcttt tgccaaaatg atataagtac gagtaagatt actgatatgt tgggtttttt
     5041 agatcctgct aaaatcaaag aattttacca tgccatttta accaaaaaca aggatagagt
     5101 ttttgatttt ttagaagagc ttaaagacta tgaagcctca agcgtgattg atgaaatgct
     5161 tttttatcta aaagaaagtt tttttgcaaa aagcagtgaa ttttcaactc tcatttatga
     5221 aagatttttc cgtatcctag caagggcaaa aaatctcatc tgtgatgatg atggctttac
     5281 gctttgtgtg atggctttta tgatgatgga agcaagtcat ttaaaagaaa tcgatacaca
     5341 aattaatgaa attcaaaaaa accttacaaa tacaaattct aatctagaaa aacaagaggt
     5401 gaaaacctct atagtattag agattcaaaa atcttcaacg attaaaaatg catacgaaat
     5461 tttacttgaa aaaatctacg atagagatta tgaacttgga gaatgcttta aacaaagcac
     5521 tcaatttgta agttatgaaa atgaaatttt aactattagt tcaaacgcgc aaggaagtaa
     5581 ccgcgataag cttaataagg gctttaaact cattcaagaa ctttttagaa atcattttgg
     5641 ctctaatgct aaaattgtcg tgcaaaaagc aatcattata gatgagagca aattacaatc
     5701 cctaacccaa gaactacctc aacaaaataa tgaagcacaa gctcctaaaa aaatagatct
     5761 tcactcttct tttaatgagc taaaacaagg agcaaagaaa tttgatcctc aagaggatac
     5821 aaaagaagct ttaagagaat attttggcga acccaaaata gaaaactaag tctctaaagc
     5881 ttagactttt ctaagtctta aagaattaag cactacgcaa agcgaactaa aacacattgc
     5941 aagtgctgct aaatgaggac ttaaagtgat aaaaggcaca aagcctgcag ctatgggaat
     6001 acaaagagta ttataaaaaa atgcccaaaa aagattgagc ttaataatat tttttgtctt
     6061 tttagcaagc ttaaaacacc aagaaataag tcttaaatca tctttcataa gtataaaatc
     6121 tccagcattt ttagctaaat cacttccttc tttaaaactc atactcgcac tcgccaaatt
     6181 taaagcagct gcatcattaa tcccatctcc tacaaaaagt gaattttgct tatgctcttt
     6241 aatgatttgc aatttttctt caggcaacaa tcctgcctta aaatcagcaa tacccaataa
     6301 atttgcgaca ctttgcacac ttttttcatt atctccactt aaaataatgc tttgaatttt
     6361 ttgattttta aaatcctcta taagctcttt agccccttct tttaaggtat tttttagagt
     6421 aagcacccct aagcactcac catttttagc aaaatacaca caaattaaag cttcttcttt
     6481 taaactctgt aaaaattcat ctgccttttc taaatttttt actccactct cttgcataaa
     6541 ttttaaattt cctagcaggt attcttcatt ttcttctatg tattttacac ccttgcctat
     6601 aaaaatttca ctacttcctt ttagaatttg agcttttatc ttagaagctt taaagatagc
     6661 cttagcgata ggatgagaac ttgaactttc gattaaggtt agcatttgaa aatctttggc
     6721 atttaaattg tgcctaaaaa gttctagatt gttttgcgtt aaagtgcctg ttttatcaaa
     6781 aaaagctgtc ttgattttat ttaaattttc taaagcagca gggtttttga ttaggataaa
     6841 atttttcatc gccgcacctt gagcggtgat taaagcgata ggagttgcaa gccctaaggc
     6901 gcaagggcaa gagattaaaa ggactgcaca agcgtgtaaa aaagcttcac ttacgcctgc
     6961 tttaaagctc caaaatacaa aaactgccaa ggcaaaagcg attattgtga tgacaaaata
     7021 tctagaaatt ctatcgactg aattttccaa aggagttttg acatttcctg ctttaaagac
     7081 aagatctttg atctgttcta aagtgctatc catagccttt ttacttgctt ttatatgtaa
     7141 atttccattt aaaagtatag agcctgcctt tatctcatca tcaactctta cactgctagg
     7201 caaaaattct ccgcttaaaa aactcgtatc aatctcggcc ttaccttgga tcactacccc
     7261 atcaactgct acgctttcac cctctcttac tactataata tctccatttt taacaaaagc
     7321 acttaaaatt tcattaagct cccctgcttc gtttaaaatt ttagcctttt ttatatcaat
     7381 ttcattgagt cttttttgat aattcaaagc cttaaattta gcatttgtct ctaaaaattt
     7441 acccaaaagc acaaaactta taatcatggc cgcaccacta aaataaaggt gcttttcatc
     7501 ttcaaaaaga tttaaatata tacaaaaaga gtaagcaaag gcactgatac agcctaaagc
     7561 gattaaggta ttcatatcta aattccaatt ttttaaaccc ttaatcgcat gagaaaaaaa
     7621 agtcctaccg caataaaaaa tcacaaaaaa gcttagaagc atttgcatat tttgacttaa
     7681 aaaacttgtg tcaaacattt caaaatacat aatcaaagca cttaaaacta tgcttaaaag
     7741 caaattttta cgcaaggaga tgagttcttt tttacggtat tcttccaaat tttgctcatt
     7801 ttctaaaatc tcaaagccaa gactttgaat tttttcaatc acatcttgac tccttgcctc
     7861 atcttcgagt aaaaataccc cactagaatt cacataagaa acacttgcat cactcactcc
     7921 ttgtattttc ttacaagcac gctctatggc attagagcaa tttacgcaag tcattttgcc
     7981 tatttttaca cgaaattctt gcattattca atcttttcta aaacttcaaa accaagttcg
     8041 ccaagttctt ttttaaattc ttcttctctt gagctatcta aattcaaact tagcgtgcgg
     8101 ggatttgcat caagatctat tttgatctct ccaaaaatat cttctaaaga atttttaatc
     8161 aaatttgcac aattttgaca attgatattt gcgactttaa atttcatttt tactccttaa
     8221 aggttgaatg gtaatatgcc ctatttcaaa tcggtgtaac aaatcatgcg acaaatcata
     8281 agataattgt tcaaattctt ttaaatcatc gatattaact cgtaaatgca tagaagctac
     8341 taacatttta ttggtaattt gtgtgatatg caaatcaatc acctcttcta ctttagaatt
     8401 taaaagcaaa gcttgtttta cctcttctat atccacagga gaggtttcaa gtaaaatatt
     8461 tacactttgc ttaagaagta ttatagccca tcttaaaagt aaaagcgata aaataatagc
     8521 taaaatcgta tctatataaa ctataccgct aaaatataca gcaataccac ctataatcac
     8581 taccaaagag cccagcaaat cactcatcat atgcaaaaag gctgatttca tattgacatt
     8641 ttctaaattt gcgcctctaa acatcataaa agcatttata gcattgacta aaaaacctaa
     8701 aacagctact ataatcatag ttttagcatc gatactgctt ggatttataa gcttttctat
     8761 agcttcatag atgataaaaa tcgctgataa aatgatagtt aaagcattga taaatgcgac
     8821 caaaatttct aagcgaaaat aaccaaaagt cttttgatga tcctgccatt tttctatagc
     8881 gataatagct aaaaaactaa gtgttagagc aaaaacatct gaaaacatat gcaaagtatc
     8941 acttaaaagc gcaagagaat tagaaagtaa agagtatata aattgaacca gcatcattga
     9001 aaaagtcatc aaaagagaaa ttttcaatat ttttttatcc acactccttg catcagcatg
     9061 atgatgttca tgagagtgat cttcgtggtt atgtttagat ttattcacta agggttcgtg
     9121 tagtaaaaat tcatacattt tatatccttt ttgcttgata ttttaagata ttaaactaaa
     9181 aaggatataa agatttatat ttttcataaa aattaaaaat caaaaagttc gcctagccag
     9241 ctttctcttt ttttcttttt gtaataatga tcgtggcttt gatgactata agaatgatca
     9301 ttatatctag gctcttgtct tggagcttgg ttaaaacttg ccgtattagg agtgctgcgt
     9361 tctatgattt tatcaagttc tccacgatca agccaaacac cacgacactt tggacaataa
     9421 tcaatctcaa ctccgcttct atcgctcatt accaaatcaa cattacaaac aggacacaac
     9481 atgtattttt ccttttttat aaaattttca aaattataat aagaaagatt aaacaaaaat
     9541 caatgctttt tagcatgcct tgtcatcata aaactttgct caaagaatat aagcaaggta
     9601 acgcttaccc ctatagccaa agccaaagtt accgaaagtg tggtaaaaaa ataatcaaaa
     9661 aactgcacca aaaattcaga cttagccttt aaatcatcac tgcgtataaa agagataaga
     9721 tataaaatag ccttataagc ataaatacca ggtatcatag gaataagcgc aggaaaagca
     9781 ataacctcag caggggtttt aataatctta gccaaagcaa tacccaaaca acccacgcaa
     9841 aaagaagcta caaaagttgc aattgccaaa gtttcaaaat gaaaatattc tatcaaggta
     9901 aagcgaagtc cgtgagcaat ggccgctaag agtgcagata aaataagagt ttttaaagga
     9961 ggattacaag catacgcgaa accaaaccca gccatagcag caaaaaacat atcttttaag
    10021 ataaattcaa tcattgtaaa atcccaaatt ttgaaatact aagagtcata taaattccaa
    10081 gagcaataca gcaaattaaa atagctacgc tgataatacg acttaaaccc attaaaatat
    10141 gatcttttaa tatatcgatt atagaattga taaaaaatac ccccggtata agatataaga
    10201 tactagaacc aagtgctgca tcagaagtat ttgtatagcc catatctaaa cccaaaaata
    10261 caaaccaaga agaaacaaaa gagcaaagaa tgtattgaat tcttaaatct atttttatct
    10321 tagtaagggc aaatcttaaa agcagtccta aaaaagtcgc aaaaaatacc aaaacccctg
    10381 cgccaaaatc cccgccaaaa agtctacaaa aacctgaatt agctatagaa acaaataaaa
    10441 gatttaatac ataagaatgt tttttttgaa tacttatagc attaaaggct gattttgctt
    10501 tttcaagttc gtatttgtga tcgtatatgg cccaacttaa agcacttaat tcaaaaataa
    10561 gtttaaaatt aatatgagca tgatgattag gtatcacata ggttctttgt atggaattat
    10621 cttcaatatc tacaatattt aaagtgatat ggtgaaaaaa gaaattaata ttgatctcat
    10681 atccataaac ttgagctatc ctgccaacgc atttagcaac tctagctgtg taggttcctg
    10741 cgcttaaaag tgttttggta tagtcgatta gaaaatttgt taaactttga atatcaggct
    10801 tttgcatatt tataatttct ttaaaatcaa atttatataa ttataacaaa atttcaaagc
    10861 aaaggaaata aaatgtcaaa aatcggtatt gtgggtttgg gttttgtggg tgcagcaagt
    10921 gcttataata ttgttgtgca aaatatttgc tccgaacttt atttatatga tatcaagcaa
    10981 gacttagcct tagcacacgc gagagattta gaagatatgt ctgcgattca ttcttcttat
    11041 acgagaataa ttcatgctac aaatttagaa caactagcaa gttgtgatat tatcatccta
    11101 gctttcagaa aagaaaattt aaaagaatta tccagtcgtt tagttgagct tcaaaacaat
    11161 atcaccgagc ttaaggatat tgttttgagt ttaaaacatg caaattttaa gggtaaatat
    11221 atcgttgcta caaatccaaa tgatacgatt acttattata ctcaaattct aagctcttta
    11281 cctaaaaacc atgtttttgg aagtggaacc aatcttgata gctctagact taaaaaaatt
    11341 ctagccaaag atttagatct taatcctaaa gatatcaccg cttatatgat aggagagcat
    11401 ggggattcgc aatttgccgc cctttctacg gctagtgttt tagggcaaaa tttactaaca
    11461 ttttgcgata agatgggtaa aaaattagat atagaaaata tcgaaaaagc agttgttaat
    11521 gaggggtatt ttatctataa acgcaaagga agaaccgaat ttggcatagg aacttcttgt
    11581 gcaaatttag ctaaagctgt tttagaagat agaaaaagct tgcatcctgt aagtgtggtt
    11641 tttgatgatt tagcattttc attgcctgct atcataggaa aaaatggggt agaaaaaatc
    11701 tttgaactag attttaacga aagagaaaaa atcaagctag aaaattcaaa actgcaaatt
    11761 aaaaatgcta tacaaagtgt gagcgataaa atttaagcct ttttagcaaa aggctttttt
    11821 atttttatat aaattaaact tgccaaaact ataaaaataa ttataacaat aagaatttga
    11881 gtcagataag ctttaatcaa ttcttcattt tcccctatat aataacccaa aaatgcgagt
    11941 atacttaccc aaatagcact acctagtgca gtaaaaagca caaaattaac aagtttcatt
    12001 ttaaccaaac ccgcaggcat ggaaatatac tgacgaattc ctggcaaaag cctacaagta
    12061 aaagtggaaa attctccgtg tttattaaaa aattcttcaa atttggcaaa tttagcttca
    12121 ttgataccaa aatatttacc ccatctaagt acaaattttt taccccaaaa aaagcaaata
    12181 taataattaa tcaaagctcc taaaacagag cctaaaactc cacttaatat acaaaaaact
    12241 atatcaagct cgcccttatg cgctaaatat cctgctggaa tcatcacaac ttcacttgga
    12301 aaaggtataa aacaactttc taaagtcatt aaaataataa tgcctaaata tccccaatca
    12361 ctagcagttt cgataataaa atgaatgatt tcttgcatat tagccttata gaagaaaaat
    12421 ttccaaaatt gtaacttaaa aaattaaaca aattaaagca agtatttaaa atcatacttt
    12481 ctaactaaga tttatacaga agctatctta gctagtctag taaaagacca gctttagtag
    12541 gcaagataaa aattaatgta aattagattt tatcacagat tttaatatcg atgattttat
    12601 caccttgacg aatagaatct agcacttcca aactttcttc atcttttgga tcaatttgcc
    12661 caaaaacagt atgaactcca tctaaatgag cttgagggct gtgacaaata aaaaattgag
    12721 agccacccgt atcgcgtcct gcgtgtgcca tagataaggt tccacgctca tgtttatgtt
    12781 cttgatcatc acattcgcaa atgatttcat atccaggccc acctatacca ttgccgtgtg
    12841 gacaacctcc ttgtatgaca aaatttggga tcacacgatg aaaatttaaa tctttataaa
    12901 atccctcatt agccaaagta gcaaaattac aaaccgtttg cggagcctca tcgccaaaaa
    12961 gttttaattt cattgtgcct ttttcagttt ctataagagc aaatttgtat tcatttactt
    13021 tgcttgtttc gattgttttt atcattattt ctccttaatc tatatttgta taaacagctt
    13081 gaacatcatc atcatcttct aacttatcta aaagtttttc tatatcgcta agctgttctt
    13141 cgctaaagct tacaggattg tttggtatat actcaagtcc tgctttttta agaactaaac
    13201 ccttagtctc tatagcagaa cttagctcac caaaggcagt ataatcaccg ctaattacta
    13261 actcttcttc attttgttct aattcttcaa gccctgcatc gatcaaatca agttctaatt
    13321 cttctaaatc tcctgcaaat ttttcaagat gaaaaaccgc ttttctagca aacataaagc
    13381 ctaaagatcc attttgtaaa acttctccac catttttgct aaaaatggct ttaacattag
    13441 ccacggtgcg cgtagggtta tcgctcatac attcaactat aaccaaagct ccatgtgcag
    13501 cttttccttc ataatgaatg tttttaatat ctgcgctatc ttttccactc gcacgcttaa
    13561 tagccgcatc tatattatct tttggcatat tatttgcttt tgctgtggct atagcacttc
    13621 ttaattttgg attcatatca ggatcagtgc caccttcttt agcagctact tgtatggctt
    13681 tagcaagctt aggaaaaagc ttactcattt tatcccatct agcctcttta gaagctcttc
    13741 ggtattcaaa cgctcgtccc ataaattctc actttcttta aagattttta aacttaaaag
    13801 tataaactaa aaaggctaat taaagcttta aatggtatga ttttaccatt tatttttagg
    13861 gagaagcttt ttgaatatcg caaaaaaaga actttttgtt gcttggtttt tcttgattgc
    13921 tgctattgta tttgaagttt taggtactag ttttttaaaa atggaaaatc aaattttagg
    13981 ctatatattt atggctttat ttatagcttt ttcttatttt tttatgggca aggcgattaa
    14041 aaaaattcaa gtaggcatag cctatgctgt atgggaactt ttagggatta ttcttatact
    14101 tttagtttct tttatagttt ttaaagagag tttaacctta actcaaattc taggcattgt
    14161 tctttctatc gttggaatta tcatgattaa tataggcgag gttaaagaat aatgtatatt
    14221 tttattattg ttctatcggc attgttagat atcgtagcga atttattgct aaaaaaatca
    14281 gatggtttta agaataaaat ttggggctta gctgcgattg tcaatgctat acttgctttt
    14341 tttctacttt ctttttcttt aaaatatgct cctttaagca tagcttactc aacttggggt
    14401 gctataggca tcataggaac ttgtcttggt ggatggattt tatataaaga aaaattaaac
    14461 aaaataggaa ttttaggtat cattatcgtg ataatagcag tatttttgct aaattattaa
    14521 aacagcaaaa tgctgtttta atgttccatt ttgttttttg cttcaatacc cattaaagaa
    14581 aatgcggttt taatactaag agcaaccaaa gaaaataatt taagcaaatc attttcattt
    14641 gcagagccta caactttatt ttcattgtag aatttatgaa aatttgcagc taaattttta
    14701 agataatcag gaattttttg caaagctcta gcctcaaaag catcgtttaa aacagccttt
    14761 aaattcaaag cttcaaaaag caaatttacg ccatcttgat ttaaactttg taaatcagct
    14821 ttcattacat catcgatttt tttaccagct ttagcaaaca cttgatgaat tctagcgtgt
    14881 gcatagttga tataatacac aggattagaa ctatcttctt tttgcaaatc actaatatca
    14941 aattccaaat gcgtatcgca ttttttgctc aaaaagatat aacgcaaagc atcacttcct
    15001 atctcatcaa ccacatcgct catcaagata aaatttcctg ctcttttact cattttataa
    15061 ggttctccat ctttaagtag ggaaaccatt tgtgctaaaa taatctcaag attattagag
    15121 tcaaatccca aaaattccat cgcagctttc attctaggga tataaccatg atgatctgct
    15181 ccccaaatat tgatacattt atcatagcct ctactcattt tatccttatg ataaactata
    15241 tccgctgcta aataagtccc acggccatct tcacggataa taacacgatc tttttcatct
    15301 ccttttaaag acgaagcaag ccaaatttta ccttcttgct cgtaaattcc tttatgctct
    15361 tttaaagatt ctaaagttgc atttaaagca tcataatacg atctttcgct tacatagttg
    15421 tcaattttaa tctttgcttg ttctaaattt tgtttaatca aaacaagcat tttatctttt
    15481 gcccaatcag ccaaactagg gatattttct tcgctaaaaa attctttacc aaatttttca
    15541 aaagcttctt ttgctaaatc cgctatatac tcgcctttgt aatattgctc tggatattca
    15601 acattttcat gaagtatact ttctttcaca cttagtaaaa tagaaagccc tagtaaataa
    15661 atttgattac ccgcatcatt gacatagtat tctgtattaa atttatagcc caaatgtctt
    15721 gcaagtcttg ttaaggtatc accaaaaacc gcacctcttg catgccctat atgtaaaggg
    15781 cctgtaggat tagcactgac atattcaagc aaaaaacttt cagttttatc ctctcctttg
    15841 gaaaattcat ttggattttg taaggcttta tttgcaagct catttaaaaa ggtttttgat
    15901 aatctaaaat tcaaatatcc attgagtgct tcaaccttat caaaatagct atgttcttga
    15961 aatttagcag ctagttcatt tgctatagaa ataggcgatt ttcttaattc tttagctaaa
    16021 gaaaaagcca aaggggtagc aaaatgagct agatttttat cctttggatt ttcaagtgca
    16081 aaattgcact ctaaaatttt tttaatttca ttaaaaataa tatttttcaa aaactaagcc
    16141 ttaagatttt tttacttcat ctatatttgc atcagtattt gcatgattgg ttgtattttg
    16201 cttttcttcg attttatgcg cattttttgc tgcttcatcc tcattgctca tttcatcttt
    16261 aaaagtctta atacccttac ccaagccttt tgcaagctct ggtatctttt tggctccaaa
    16321 aagtaataca acaattaata aaataattaa ccaatgactt ggacttgacc aaccacccat
    16381 tttattctcc tttgttccaa atattttgaa tttgctctag attttgccct ttagtcttaa
    16441 acttatgggc aattaaaatt gctcttaatg cttcgtaact ttcctctagc ttatcgttaa
    16501 tgataaaata atcatactca ttaagctctt tcatttcatc acttgcattt tgcaatctct
    16561 tctctagttg caatattgta tcagtatttc gcttaataag tctttttttt aattcatctt
    16621 tattttttgt agtgataaaa acagaaatga ttttttcagc cattttcttt ttgactatct
    16681 taaaaccttg tacatctata tcaaaaacaa ctatttttcc atcatttaaa gcattttgtg
    16741 tatgctcaag cgaagtgccg taaaaatttt catgcacttt agcccactct aaaaactgct
    16801 ctttatctat accttgctga aattcatcat gcgtgataaa ataataatcc actccatgtt
    16861 gctcaccttc tcttggtagg cgtgttgtcg aagaaataga aaaataaagc tcttcttgaa
    16921 attcatcaaa aagctttttt aaaagagtgg attttccagc tccacttggc cctgaaacca
    16981 acaatataaa agcactcaat ttttatcctc attaaaacta atgctaatat ttatattcat
    17041 attcataccc ttaagtgctg cttttaaggt atcatcttta atgcttgaag tgatagcccc
    17101 tgctatactt tggcttaatt cattaacaat ttcttcacct gcttcacttg ctagttgatc
    17161 ttctttgatt tttaatttct cgcttttgtt atcctctaaa gtagatattt tttcgcctaa
    17221 agcttcttgt atatcgcttt cttttaaact atcaaaatca ttgatttgta attttggaac
    17281 aacgatttcc tcatcattat ttggcaaatc tttatcgtct aaaataggct cttctttaaa
    17341 atcctctaaa accttaatac tatcatcgct atcaatatcg tattcaagct catcaagttg
    17401 tgctaactct tctttgattt gatcttgagt gcttaagcta ctcatttctt caaaatcatc
    17461 atgttcattt aaattttctt gatcttctac aacaggcaag aaatcctcta cagcttcatc
    17521 ctcttctttt ctttgaccta aaaattcagc atcttctgga atatcatcaa aatcgatttt
    17581 tctttcttgc tcttcaacga taggaaaatc atctgtaata aaatcttgca actgagtttt
    17641 actaggctcc tctgcatctt ctagtacttc cggttgagct tcttctgcat ctaaattatt
    17701 atttacaatt gcctcttgag cttcagagtt ttcattatct tgcactaagt caccatttaa
    17761 attatcaact tgatcttcaa gttcttgagt atcttctatt ttatcttgtt catcttggtt
    17821 tgcatcttgt tcttgtgtat cttgctcttg aatttcaaat tcttcttcat tttcttcgct
    17881 agttttgtca tttaaaatat catcttgaaa tgctacttcc aaagcttgct catcttcatt
    17941 tttttcctct atatgattag ctgtggtttg ttctgacgca tcattctctt cttgatcttc
    18001 atcaagactt aaatcatcta aatttaattc tttatcggta ttttcactag caatttcttt
    18061 ctggtttgtt tcttcttcca tgtcatataa agctaaagat tctaaatttt cttccataga
    18121 aagctcattt tcttgcgtat cttcagtatt ttcatcaggc aagtcatcta aatttaaacc
    18181 atctaaatct aaactgatat tagcgtaagg attttcagct tcttcgattg gcaaaataat
    18241 gtcatctgcg attttaagat tttcttgatt gagtaaattt aaaaagtctg taggtaaaaa
    18301 tggtttatgc aaaattaagg catcaatatc cacactttga ttacgcggcg ctaaaaaaat
    18361 taatttatcg catttttctt taagaatttt caaaggagca ggtgtatcac tgtcgactat
    18421 aatcacatca taatgaccta aattttcatc ataggcatta atttcctcaa aatcataaga
    18481 catttttttt gcactcaagc ttataagtct tgatacaaca gggttttcat tcaaaagtaa
    18541 aattttcatc actttaatcc ttaaaaataa ttgctattct ataacatttt catttatcct
    18601 ttgcttaggc gaaaaacaga gtttgcatat gagtaaaaac ctccaaaatc aaatctttaa
    18661 aatattgcat catcacaagc aaaatagcta ttagaactac aaatcctaaa gctatcttga
    18721 taggataacc aattactaaa agattgaatt gtggcatagt tttcattaaa agcccaaaaa
    18781 tagtatctgc caaaagagaa attccaagta ttggaaaact catcgtaaaa cctataatga
    18841 aaatattcaa catccccata tttagataat gcattaaatt ttcatgagga taaaaaccgc
    18901 caagatttat ataacccaaa gaatgactta gaaataaaag cattaaatga tgaccatcaa
    18961 aagcaagaaa aaataataaa gcaatcaaat gcaaaatttg agaagtaata ggcatatttg
    19021 ttccagaact tggatctaaa acgcttgcca tagtaaatcc catagtaaaa gctatctgct
    19081 cgcccgccat cataacaata gcaaaaacaa tctgcagcat aagccctgct atcattccaa
    19141 aaacaatttc acttaaaagc tgtataataa aaaaactatc taaatgcaaa atttcaagtt
    19201 ttgctaaagg aaataaatac attgttaaaa ataatgcaaa agtagttttg ataatcatag
    19261 ggatagaatt atgagaaaaa aaagggaaaa atactataag cccactcatt ctagcaaaaa
    19321 gcaacataaa ggtagctaca tttttatctc ctaaataatt aacaaattcc attggtattt
    19381 aaaatataag ttttatcaca aaattgagca agcttagaat catgagtaac aaaaaacaaa
    19441 gcagcatcat tttctttagc ataagaaacc aaaagctcta tgacattttt agcattatca
    19501 aaatctaaat ttcctgtagc ctcatcggca aaaataattt ttggtttttt acaaagcact
    19561 ctagctatac tcacgcgttg ttgctgacct ccgcttaatt tacctatttt ttgttttaaa
    19621 agctcgtgaa tgcctagttt ttttaagatt ttttcatcta aatcttggtt tgataaaaca
    19681 ctagcaagtt ctatattttc taaagctgaa aaacctttaa aaagataatg ggtttgaaaa
    19741 atgatgccca agtcataacg acgaattttc agtctttcat tttcacttat cttgtaaaga
    19801 ttttgaccct taaaaaaaac ttcgccctta tttggcttta ataaagaaga aattatatgc
    19861 aaaagagtag attttccgca accactactg ccttgtatag caatgcaatc tttttgattt
    19921 aaagaaaaat ttaaattttc aaagagcgga taatcaaagc tgtgacctaa attttccgct
    19981 cttaataatt ccattttgat actttaaagc tgtgcagcaa cttcagcagc aaaatcttcg
    20041 gttttctttt ctaaaccttc tcctacttca aaacgaataa attcaacgat tttaattttt
    20101 ccacctaatt ctttttcttt ttcagcaatt acttgttcaa tggttttttt atcatccatt
    20161 acataaaatt gacccattaa agtaagtttg ctgtcaagtt gagaattatc cgctataaag
    20221 ctattcattt taccaggaat aatattgtcc caaattttct caggtttgcc ttgagctttg
    20281 agctcttctt ttatattttc ttctgcttct tttaaaatcg catcgctaag ttgtttgcgg
    20341 cttgcaaatt taggaatttt atgctctggt ttgtttggat ctttaagtct gcgtctttct
    20401 tcattttctt tttcaagctc tgcaactaaa gctttgtatt cattttctac aaattctata
    20461 tccaaatctt catagcttaa atagcttggc ttcatagcag ctatatgcat acaaagttgt
    20521 tttaagaaat ctcttgattt atttgctacc tcagcattat cacaagctgc agcgatgata
    20581 acacccacac gaccattagt atggatatat ccatttacca caccatttgc acttgctttt
    20641 aagctagcaa atcttcttac aaccaaattt tcaccgatag ttgcaatttg actttttaaa
    20701 tattcttcaa attttacgcc gttgattgta ctagagtgaa gctcttcaac actttgcaag
    20761 ctattgtttt gaatgtgtgc tgttgtatct tttgttaaag caataaattg atcattttta
    20821 gccacaaaat ctgtttctga gttaatctca cttactgttg cgcttgtaaa atcatcactt
    20881 accttaacac ttaccaagcc ttctgcggca agtctatcag cttttttagc agctttacct
    20941 aagccttttt ctcttaaaag ttgaactgct ttatcaaagt ctccatttgt ttcactcaaa
    21001 gcatttttac aatccatcat ccccgcgcct gtactttcgc ggagttcttt taccattgca
    21061 gcagtaattt cagccattat tcttgctccc cattaaaatc ttcttcactc attgcttcat
    21121 ctaaaacttc ttttttttct tcatctgtga tttctttttc ttcacttggc aaagcttcac
    21181 catcttgttc tcttaacgct tttccttcat tgatagcttc agccatttct tggcagaaaa
    21241 gttgcactga gcggattgca tcatcatttc ctggaatagg ataagttaca agatcaggat
    21301 cgcagtttgt atctaacgga gctactacag ggattcttag tctatttgct tcttgaactg
    21361 caattttttc ttttactgta tctataacaa aaatcatatc tggttgtgtt ttcatataac
    21421 gaattccacc aagataagcc aataattttt ctttttttct tgtaagcatt aaagcttctt
    21481 ttttggttaa aagtttaata cttccatctt cttccatttt ttcaataact tctaattttc
    21541 taattgattg gcgaatagtt ccaaaatttg tcatcatacc gcccaaccat ctgtgattta
    21601 cataaggcat accgcatttt tcagcatatt ctttaatcgc tccacccgct tgtttttttg
    21661 taccaacaaa aagtatagtt tttccttcag cagcagcatc gcgaacgata ttgtaggtat
    21721 atctaaaata tctcaaagtt ttttgtaagt ctattacata aatacctttt ctctcaccaa
    21781 aaataaattt tttcattttt ggattccagc gtcttgtttg gtgtccaaag tgtacaccac
    21841 attccaataa atctctcata cttaccatga gtttctcctt ataatttagc tttattcctc
    21901 cgcatccctt atctataaaa caagctaaaa ggacttgatg cgtgtgaaat gaagctaaaa
    21961 ttatatcaaa tttaagttta gtatttactt ataaatatac tctttagtaa ggctaagatt
    22021 attattgatt tctttcgtaa ttaaaaattg aaacaaatct acacttccaa cgcgaaatgc
    22081 agaagcacaa gaacgaagat acagatccca cattcttaca aattcttcat catatttttc
    22141 tctgacttga ggtaatactt gattaaaatt ctcactccat atatctaaag ttttagcata
    22201 gtgtattctc aagctttctg ccaaaagaag atgaaaatcc cactcactca tagcacttac
    22261 aacctctctt aacgatggca aataacctcc tggaaaaata tatttatcta tccaagcatt
    22321 agtttttcct tcaaacattg ccaaaattga atgcaaaagc atagaacctc ctggttttaa
    22381 tacttgtttt gccttcatga aataaagtcc taaattttct ttacccacat gttcaaacat
    22441 tcccactgaa acaaccttat caaaataatc ctcaaattct aaatcttgat aattttgaag
    22501 tcttatctcc actctatctt caagcttaag ctctcttact ctttcttggg ctttcttgca
    22561 ttgctcttct gaaatagtaa ctccaacaac cttaactcca tatttttgtg ccgccataat
    22621 agaaagccaa ccccaaccac aacctatatc caaaagcttt tcgttaggtt ttaaatcgag
    22681 ttttttaaga gtatgctcta ttttgttgat ttgagcttca taaagagtat cgctagaagt
    22741 cttaaaataa gcgcaagaat aactcatcgt atcatcaagc caaagcctat aaaaatcatt
    22801 gcctatatca taatgacttt tgatgttttt actttcttct ttttgggcta ttttactcaa
    22861 gatatcttct ttatttttta aaaaacgttt attggaaaaa taatacaaaa ctttagctat
    22921 ttcatcataa tcaccctcta tttctaactt ggactccata taatgttttg caaaaactaa
    22981 actcgtatca ctaaataatt ttaacaaagg tattttttct ttgaaaatta aagaaaattt
    23041 agcaggttga ttgcccacat aaaattcttc ttgatcccaa aatacaattc taaaatttcc
    23101 ataattccat tttgaaagaa taaatttaat catttgtttt tcaagcatga tatactccaa
    23161 ttaataaaaa ttattatttg atagtatctc ttaattaggt ttaaaattta ataaaatcga
    23221 agaaaagaag gatttttgcc acagatgtaa aatagtggca aaaattttat aatattaatg
    23281 tagtttagac caaacagaac gcttccagcc tatagcaaaa atacttagaa ttacaaagaa
    23341 tatcattata taaattcctg tgctttctct ttcttctttt ttgctatcgc ccactttttc
    23401 aagataagaa acaactttaa cttgtgcatc ttctgttaaa cctactcttg gcatagcagt
    23461 tcctggaaga agtttttgag tattattgat aaaatcatgc aagtattgct ccccgcgaga
    23521 tctaatcatc atagaaagat caggtggaac cgaacctaaa taatttgcca agtcattatg
    23581 gttagatggg gtaaagaaat tatcatactt aatatcatga caacgaccac aagcttctat
    23641 aaaagtactt ttatctttag caaaagcaat ttctttttca actaaagctg atttctcgtt
    23701 agcgtcttca atttttgagt acttaagctc tgcctcttgt ttaattgtag cattttcctt
    23761 agcttcaaat ttaagaccta cttcttttaa ataagcaata acatcggcta tatttgcatt
    23821 tacaagctct tcactatctc ctgaaacctc actattgtaa gcagtcataa tgaaagcatc
    23881 accaaattta tgatctacct tcaaagcaag agcaggattc atgatcaaag cagctaaaaa
    23941 cttctcatca aaaataacac ctgctgagct aagatctggt ggaattacac ctaaagaaga
    24001 atctgtaata tttgctgcta tatcatcttc tttaacgcca tgacatgcaa aacaattatt
    24061 attaaagaac tccttgcctt ttgcggcgtt tcctttagta aaatcaattt ttgcaacatc
    24121 tgcccaaagc tcttctactt tagctaaatt ttctttagcc ttatctagat cttgttgagc
    24181 actttctatt ctttttgcgt catttgattt tttcgcatct tctaaagcta tttctttttc
    24241 tgctataata cctttagcat aagctgtatc ttctgctgca taatcaaaat tagcaggagc
    24301 aacatggggt ttcattacag agtgggcata aggctcaact ccccaataaa caagagcagt
    24361 aaaaactact actactaaaa atatttttag ctctctcatt gcttagctcc ttttctttcc
    24421 atgatagtta ttacaggtaa aacgactata aataaaagta aaaatattat agaagcataa
    24481 aaaccaaccc aagcatttac acctgttgga ggtaattttc cataaatagt taaaactatg
    24541 agatctataa gcaataccca aaaccaaata aaaaataaag gtcgttcatg agcaggttta
    24601 actacatcac ttctatcaag ccaaggaagc aagaagaaaa taatttgtgc gataccaaaa
    24661 gcagccaaac ctatatcaaa agctttaata cctgcaatat caaagaaaaa tcctcttaaa
    24721 acttcataac tccacaagaa ataccactca ggataaatat gtgctggggt tttaagtgca
    24781 ttagctggat caaagttgat aggatccatt gcaaaaccaa atttaaaact taccaaatag
    24841 aaaaagaaaa tcataaaaag acaaatatac ataaagtctt tagataaaaa tcctggccaa
    24901 aaaggaatta ctttagaacc ttttgtatca cctgccatgt atttttcagc ttctaaatca
    24961 aaatctaatt cttcagcaat ttcattattt acatgaggaa ttcttaaaga ataaaagtgg
    25021 aatgctatga tagcaatgat tactatagga agtaaacata catgaagcat aaaaaatctt
    25081 gtcaaagttg gatcagaaac cgcataatca ccacgaatcc aaataacaag ctcaggtcca
    25141 ataagtggaa ttccaccaaa aagattagta ataacttgag ctgcccaata actcatttgt
    25201 ccccaaggaa gcatatatcc actaaaagct tcggcagaga atacaacaaa caaaagcata
    25261 ccgcttaccc aaatcatctc tctaccacgc ttataagaac cataataaat tcctgttagc
    25321 atatgaatat agataattaa gaagataacc gaagcggcaa caccgtgcat atgacgccaa
    25381 agccaaccat attccacttc ctgcatgata gttttattta cactatcaaa agcaagagca
    25441 gtatcaggct tataatacat aacaagcaaa agccctgtaa taaaaagcac agtaaaaaga
    25501 gtagttaaaa taactcccat tgcccaaaga aaattgattt gctttggaat ccaatatttt
    25561 accattaaaa catcaagtaa tttatgtact gctagtcttt gatcaagcca atccactagc
    25621 ccattagcct ttctaatatg cgccatatta agcttcctcc gtcatttttt tgtattctgg
    25681 accttcttca cctagaacaa gtttggttcc atctatttta aaaggaggta tatcaagagg
    25741 tcttggagga ggcccaaagg tattttttcc acttgtatca aattcaccac catgacaggc
    25801 acatttaaaa agttgctcac ttgcgtgata agcaggaata caacccaaat gagtacaaag
    25861 tcctataaca acagtatatg cagcattatc taccacaaca tctcgctttg tatccttttc
    25921 catatttgga tcttttttta agataaaaat aggcttttta cgccattcta tagttctaag
    25981 ctctccatct tgcattcctg ataaatctac tgtagtaaaa cccgcagctt taacacttgg
    26041 aagcggatcc caagtttttt tcaccgcaac aagtgaaaaa acaccgccta cagcagctac
    26101 tgttccaaat gcaaaaccca taaagcttcg tctactttca gatgtagcca taactttgtc
    26161 ctttcgtttt tttattttta accaaattat tagtgtatct aaaataaaat aaattttttc
    26221 tttgtttact aagttttgtt ttaatattgt aaaacaagtg caaaaagtga acaagtaagt
    26281 actggtaaag tgattaaaaa accaaattta caatacttcc aaaaagaaat ttctatacct
    26341 ttttttgcta aaagtcccaa ccaaagcaag gtagctaaag aacctatggg agtaagtttt
    26401 ggtcctatat taactcctaa aagatgtgca taaaccatac tttgaggaaa attttttaaa
    26461 gccaaatcgc caatcaatgc cataggcaga ttattaaata cagaagaaag aaaagccgag
    26521 ataaaccctg ttccaaaaat agcagtaatt gcattttgag ccaaaatatc atagataaaa
    26581 attaaaatat cgctgattcc aactttatgt aaggcaaaaa ccaccatata gagtccaaaa
    26641 ctaaaagcaa aaatacccca aggtacattt ttgataattt tcaatgcctc tctttttttt
    26701 aaaaaacaaa caaaaaacca aaagagtaaa gcgccgctta cagcaaaaaa actagcattt
    26761 aagttataaa tttctcctat aaaaaaactt gatacaaaaa atattaaata aataacacaa
    26821 aaaataaaaa gctttaccga aatacaatca tttgatgaaa tattgatttc aagcccctta
    26881 ggtaatattt ttgcaaaaat caaaaatacc attataatag tagacaatag cacaaataaa
    26941 ttaggcaaaa acatagtctt agcgaattct aaaaaatcaa gattaaaata attagctgta
    27001 ataatatttg tcaaatttga gataattaaa gcatttgaac ttgcatcgca caaaaaagaa
    27061 acactgagta aaaatgcact taagatagcg ctttctttat aatttttaag agttgaaaaa
    27121 agcgcaaata caataggcgt aatgattaaa atagctccat catttccaaa taaagccgaa
    27181 agacaaaaaa caaaagcgag cataaaaagc attaattttt tagtgtgaat tgcatgagaa
    27241 tttttaagtt ttgaaaggcg caaaattctt atagctataa agctaaaaaa ccctaacact
    27301 tccaagctaa aggaaagtat aatcaagccc acaagtgtta aggagctatc ccaaacaaga
    27361 tcaaaaacaa aagaagcatc ctctaaatta accagcttaa aaataaatgc aaacaaagcc
    27421 ccaaaaatag caatcaacca taaaggcaaa ttccacggac gccaaaaaag taaaatcaag
    27481 gtaattataa aaattacact ggcaagcatt aagatttttt cttttgcatt tttatataaa
    27541 tttgtaaaat atccaaagcc gcaggggtaa tcccactgat ctcactcgct gcaaaaagcg
    27601 ttaaaggctt atgtttttga agtttttcta caacttcatt actcaatcca ctcacacttg
    27661 taaaatcaaa atcacttgga attttcatat caattaaatt tttcattttt tcaacttgtg
    27721 atttttgcat agcgatataa tgataatatt tagcctcatt taaaatttct cttaaagaat
    27781 actcatccat attctcaaaa atcgtattta atttttttag cttttctata tcaaaactcg
    27841 atcttgcgac aattttttgc aaattgacta tggaagtgat tttttcctct cctatactcg
    27901 ctagaaaggc attattttca gtatttggag taaattcttt ttcaagaagt aattcaagtc
    27961 ctttttgagt atttaaacga atattttcta taaactgata agactcatct tctaaaagac
    28021 ccaactcttt accatacttt ccaagtctta cgatggcatt ttcttctctt aaaagcagtc
    28081 taaattcagc ccttgaagta aacattctat aaggctcttt tgtgccttta atgactaaat
    28141 catcaatcaa aacaccgata taagcttcat ctctacgcaa aataaaaggt tctttattat
    28201 ccaaagctaa aacagcattc actcccgcca taaaaccttg agccgctgct tcttcatatc
    28261 ctgtagtgcc attaatttgt cctgcgcaat aaagattttt aatttttttt gtttctagag
    28321 tatgataaag ctccgttggt tctatataat catattctat agcatagcca aagcgtgtaa
    28381 ttttagcctc ttcaaaacct tttactgagc gtaacatttg agtttgtact tcataaggta
    28441 aagaagtaga aaaaccgtta atataatact ccgtcgcatc gatagtttga ggctctataa
    28501 aaagatgatg actttctttg tcgctaaaac gattgatttt atcttctata gaaggacaat
    28561 atcttggccc cacaccttca atctgtcccg taaaaagtgg agcacgataa aaattattct
    28621 taataatctc atgtgtagtt gtattagtgc gtgcgatata acaaggaagt tgtataggat
    28681 taaaattttt tgttctaaag ctaaaagctt tagggttttg atcgccgtat tgaatttcta
    28741 atacatcaaa atcaatactc ttagcatcca ctcttgggca agtccctgtt tttagtctac
    28801 ccatttttaa gctagtactt aataaattct gacccaaatt cacagaggca agctccccta
    28861 ccctacccgc tgtaagttta ttttccccca catggataag tccgtttaaa aaagtccctg
    28921 tagttaagat cactttcttc gcttcataag tattttgaag attggtttta acccctacaa
    28981 cgctaccatt ttcataaatc aattcgcata cttgctcttg agaaatttct aaattcttaa
    29041 gctttaaaag cttattgcgt gcaacgatac gatatttatc catatcaatt tgcgccctac
    29101 ttcctcgcac cgcaacaccc ttactttcat ttaaaatgcg aaattgtatc cctgcttcat
    29161 cggtgatttc acccataaga ccacccatgg catcaagttc ttttaccaaa tgtccttttg
    29221 caagccctcc tatagccgga ttacaacttg ctgctcctat ttgctcaatc aatgtagtta
    29281 aaagtaaggt ttttttaccc attctagcag cagcagcact tgcttcaaca cccgcatgtc
    29341 cgccacctat aacaatgaca tcaaacatat tttgccttaa aaatgtgaat tattaaaaga
    29401 aagattatat aatacttaga cttaaaacaa actcgtttta agtctaacaa aaaattatct
    29461 agcttcttga agagagaaaa ttaactcatt ataagtttta tctgcatctt tgcagaaatt
    29521 tttaagcatc tcaacaccct tatttaaacc ttgttgttgt tctactctta gaagatcact
    29581 ataaaggctt tctatcgtag aaatagcgct tttatttggc atacgacgaa cggaataata
    29641 gcctatgata ttattattaa tatctattga tggagttaca tttgcaaaaa cccaataata
    29701 attattatct ttggttttgt tttttacgta agcaaaaatt tccttaccct ctctcatata
    29761 atcccataaa tatttaaaaa cagtttttgg catctcttca tgtcttacta tgttatgagg
    29821 tttatttaaa acttcaccca tggtataacc tgcatatttt aaaaaatcat catttgcata
    29881 aactattcta ccttttaaat ctgttttaga agtaattaaa ctatcttctt gtaaaaaaat
    29941 ttctcttgac attttcccac cctcttaatt tatattttta attttgctaa gatttcagca
    30001 cttctttgct ctagtgattt aatatcattt acaatcgcat cataagcttt ttgatcgata
    30061 taatcttgac ttgattcttc tattgctttt ttagcgttat cttttataaa ttctttagct
    30121 aaatttaact cagtttcaga actaagctca ttaataacac cttgagctct ctcatcttga
    30181 caaagattag aaattggatc tacactttca agattgaaat tttgagcccc atttaaattt
    30241 aaatatatat ttgatttata aagaatatga tcgattttaa ccacagacaa aatcaatctc
    30301 tttgcaaagg atccaaaatt aacaccaaga gcactactat tttcttctag acgtttaaaa
    30361 gcttgagaaa atttattaat tctttcttca gattcactaa caatgttaaa aacttgctca
    30421 ctgccacttt ggatatttac aaaatcttgt tgcatagtct gaattgcaat agaaatttca
    30481 cttgtagatc tttgagtcct ttctgctaat tttctaacct catcagccac aacagcaaat
    30541 cctctaccat gctctcctgc acgcgcagct tcaatagcgg catttaaagc tagaagattg
    30601 gtttgatcgg ctatatcgcg tattacttca accactgaag tgatattttg tgaattagcc
    30661 acaaaagttt gtactgtctc cttgctcgaa tttacaacat ccattaaaga acccatagca
    30721 ctttgtaaag aatccacttc tgagccattt tctgtagctg tatgagaaat ggcatccact
    30781 gtatcatata catttttcat catactaata tcttgattta atgagctaga aatttgagac
    30841 atatctttat tttgatttcc aaggcttaaa tccattaaag ttcttgataa agcattttta
    30901 aaagtagatc ttgctgtcac ttctatgttt gctaaagctt tatttataaa ttcgatatta
    30961 tgagcaaaaa ttccttttaa accttcaggt aaagccttgc gataaaattc acctttttga
    31021 gaacaagaaa tagacgtatt aatttccctt aagtaagctt ctagcccatc aatagtattg
    31081 ttaagattat ctgctatttc ggctaatttt ttgctttttg tttttacata gataattcta
    31141 ttgtcaaaat ttccttcttt taactctcta caaagaacca aaagtttatc tatcattatt
    31201 tgctcatctt tgtgttgtct aaacaaataa atcattaaaa cagcgattaa aataaaaatt
    31261 atcactccaa cataaatatg aaaaaaaata gcacctaaaa taccaataat gcttagaaaa
    31321 atagttaata ataatccatt tttcaccata aatttacccc ttttattgaa aattttttga
    31381 aatcataaat caaaacaata ctttaacgat gcactgattt aatttttagt agaagattat
    31441 ataataataa agattagata tatcttattt taattatttt cttgtaagtt aaaaataagc
    31501 tcattgtaag tcattttata agaacttaca atatccatta aagctgaaac tccagcatta
    31561 atacctgatt ttttctcttt ttcaagtaaa attttataaa cttcttcaat tatagaaata
    31621 gattttctat tgggtgcacg acgaacagaa taataattga tgatatttcc attagcatca
    31681 aatgaagcac ttacatttgc aaaaacccag taaaaattac catctttggc tttatttttc
    31741 acaaatgcaa aaatttcatc tcctttttga atataatccc aaagacattt aaatacagtg
    31801 cgtggcatat cttcatgtct tactatatta tgagatttat acaaaagttc atcaacttta
    31861 taacctgcgt attttaaaaa gtcattattg gcataaatga tatttccctt aagatcagtc
    31921 ttggatgtga taagagcatc ttttgctaag aatattt
//
LOCUS       DBBXOW010000010        29609 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.010, whole genome shotgun sequence.
ACCESSION   DBBXOW010000010 DBBXOW010000000
VERSION     DBBXOW010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29609
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.010"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            21..776
                     /gene="proB"
                     /locus_tag="ACJE1S_000467"
     CDS             21..776
                     /gene="proB"
                     /locus_tag="ACJE1S_000467"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HGG0806037.1"
                     /translation="MQRIVVKVGSHVISDENLLNLKRFENLVAFLTKLMQKYEVILVT
                     SAAISAGCTKLHIDRKNLINKQVLAAIGQPFLISVYNEFLAKFGKMGGQILLTGKDFD
                     SRKATKHAKNAIDAMIDLGILPIINENDATAIEEIVFGDNDSLSAYATHFFEADLLVI
                     LSDIDGFYDKNPSEFSDAKRLERVEFIKEEWLNVSVKTGSEHGTGGIVTKLKAAKFLL
                     ENHKKMFLASGFDLSVAKAFLLENKQIGGTLFE"
     gene            855..989
                     /locus_tag="ACJE1S_000468"
     CDS             855..989
                     /locus_tag="ACJE1S_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806038.1"
                     /translation="MKKSVKILLSVATFAYDPYTCSLQNLINPGSCNPNLVPNDEYAC
                     "
     gene            1043..1771
                     /locus_tag="ACJE1S_000469"
     CDS             1043..1771
                     /locus_tag="ACJE1S_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806039.1"
                     /translation="MSILVNAVDTFYSTKNEAVFSASKSENIKRNVADFNTDNNTKNS
                     VYFFSDDKEISLNLSNESMELLTNHFSANDFLKLSNGNIGLSGKAAAFVEGWYKDIMI
                     NRNFLNADRDKNGRIENNEHLSLKNSVEDVAKNQDLSKNFGAVVLRMTQSTTGYVENT
                     ISDKSLSIEALIDESIKSDRNFDGIITRLEYSAKGGTDMQGYTNWAIDALNDILDDSD
                     KAKNSFSCRSYKQNLAFVCRQNIK"
     gene            1686..2078
                     /locus_tag="ACJE1S_000470"
     CDS             1686..2078
                     /locus_tag="ACJE1S_000470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806040.1"
                     /translation="MIAIKPKIHLVVDPTSKIWHSYAGKTLNEVKAYYDNPFRATSGT
                     SASGFLNIVIEEPRILPSNDLENEKEQLLNEFPEFRALIQNNPNITKEKLLKLKNQQR
                     ITHNYQDHQKQDLQKEFTQNFFKTDLKA"
     gene            2220..3137
                     /gene="fmt"
                     /locus_tag="ACJE1S_000471"
     CDS             2220..3137
                     /gene="fmt"
                     /locus_tag="ACJE1S_000471"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HGG0806041.1"
                     /translation="MKKIIFMGTPSYATCILKALLEDENFELLALFTQPDKAVGRKQI
                     LTPSDTKAFLLQKAPQIPIFTPNSLKDESVIEQICALKPDFIVVAAYGKILPKAILDI
                     APCINLHASLLPKYRGASPIQSAILNADEKSGVCTMLMEEGLDTGAVLESVECDIRDK
                     NVNEVFEILANLAAKLTLSTLLNYEKLLPKKQDESLATHCKKIKKEDGLVSLDNAREI
                     YQKYLAFTPWPGVFLENGLKFIELELVDELKQNAKMGEILELEKESFLLACKQGILRI
                     KKLQESGKKALDGRTYLNGKRLKSADSLC"
     gene            3100..3753
                     /locus_tag="ACJE1S_000472"
     CDS             3100..3753
                     /locus_tag="ACJE1S_000472"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HGG0806042.1"
                     /translation="MEKGLKVQIACVESIDSTHLFLCEQIRSGKINENFALYALNQTK
                     GVGSRENSWQSSSGNLHLSFCIKEGDLPSDLPLASVSIYFAYLLKEILQEKGSRIWLK
                     WPNDLYLDDKKAGGVISTKISDFIVGGMGLNLKFAPHDAALCDVEILLKDLIQEFLQR
                     LEKKFLWKHIFSKYMLEFEKSRQFSVHYEGKVFSLENAFLYEDGSILLGDKRVYSLR"
     gene            3750..4535
                     /locus_tag="ACJE1S_000473"
     CDS             3750..4535
                     /locus_tag="ACJE1S_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0806043.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMILKNQIQEVLDEYDFIIIDSPPALGSITINAFVASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINPKLKVRGFLPTMYSSQNNLSKDVVEDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSLAYQNLAYSILG"
     gene            4540..5376
                     /locus_tag="ACJE1S_000474"
     CDS             4540..5376
                     /locus_tag="ACJE1S_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HGG0806044.1"
                     /translation="MGLNKNRGLSTLMGDVGEVYSRELGLDKNQVSLVEISKITPNPF
                     QPRKTFDEAALNELANSIKEHGLIQPIIVLKKNDSFILVAGERRLRATQILGKENILA
                     FVSDSDESKLRELALIENIQRENLNPIELANSYKDLIEVYNITQENLAELIHKSRTQI
                     TNTLRLLNLDPKTQDLIASGKISQGHAKVLVGLDKEDEKVLVDSILGQKLSVRDTERL
                     VQKVKNKENTEDVEFENSMQSLKQTLNKLGFASKNNKKELIIRLDNIEKIKKLTEILN
                     KF"
     gene            5435..5860
                     /locus_tag="ACJE1S_000475"
     CDS             5435..5860
                     /locus_tag="ACJE1S_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FoF1 ATP synthase subunit B'"
                     /protein_id="HGG0806045.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNTMLYRPLLKFMDERNDSIK
                     NDENKVKENSQEMLGANDEVEAIHVSTREEIHKIKQNAINAAKEEAQQAIKAKKEELE
                     RKMANFYTELVSQKKELQDHLSAHLPDLKQALQNNIKQH"
     gene            5873..6385
                     /locus_tag="ACJE1S_000476"
     CDS             5873..6385
                     /locus_tag="ACJE1S_000476"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HGG0806046.1"
                     /translation="MKKLFYFIFLLPLCAFGASNGSGEYDIVPRTINFLIFVAILYYF
                     VANPFKAFYKNRILRISLKLDEIQKKLLESKAKKLDTMKKLEEAKANAAAALVVAKKE
                     AEVLAQKIKEETQNELALLEKHFEEQKDYEFRKMEKEVVSLTLKEIFEDSNIALKQNE
                     IIDIMMKKVS"
     gene            6385..6906
                     /locus_tag="ACJE1S_000477"
     CDS             6385..6906
                     /locus_tag="ACJE1S_000477"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HGG0806047.1"
                     /translation="MNDLIAKRYAKAIALRADISEFYDNLFVLSSAFASPKFKNIIES
                     NQIQKEKKLEFVISLIEKASPSFNNFLKLLAENSRLSCIPQIAKELERQKSFKENIFL
                     GTVYSKEVLSEDNIKELENRLSTKFGVKIKLQNKVGLNEGVKISLEELGYEISFSMKA
                     LQNKMSEYILKII"
     gene            6919..8424
                     /gene="atpA"
                     /locus_tag="ACJE1S_000478"
     CDS             6919..8424
                     /gene="atpA"
                     /locus_tag="ACJE1S_000478"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HGG0806048.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFDNGDKGMALNLEESSVGIVILGKGEGLKEGTSVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINSNEFRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQKGQGVVCIYVAIGQKQSTVAQVVKRLEEHGAM
                     DYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGYLDDVAV
                     SKIREFEDGIYPFIEAKYPDLFEQIRSKKALDAELEEKLAKAINEFKANHL"
     gene            8434..9318
                     /gene="atpG"
                     /locus_tag="ACJE1S_000479"
     CDS             8434..9318
                     /gene="atpG"
                     /locus_tag="ACJE1S_000479"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HGG0806049.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSRV
                     YAQKIDEILSEISFQVNKIVHNEEDSRFVLFHKKNQIKNVDLIFITADKGLCGGFNIK
                     TLKAVSELLKEYEEKNINVRLRAIGKTGIEYFNFQKIELLEKYLGLSSSPDYDKACSV
                     IQAAVDDYLNGITDEVVLVHNGYKNMITQELKISHLIPVEPKQIEGNSNSLLELEPED
                     TDLLGDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            9345..10742
                     /gene="atpD"
                     /locus_tag="ACJE1S_000480"
     CDS             9345..10742
                     /gene="atpD"
                     /locus_tag="ACJE1S_000480"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HGG0806050.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKQKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EVAFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGI
                     YPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     IVERARKIEKFLSQPFFVAEVFTGSPGKYISLEETIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            10746..11135
                     /gene="atpC"
                     /locus_tag="ACJE1S_000481"
     CDS             10746..11135
                     /gene="atpC"
                     /locus_tag="ACJE1S_000481"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HGG0806051.1"
                     /translation="MDNLISFEIVTPMGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKISVLAKGAVWISGSSESEIEKNLESA
                     KELIKSMSSDNTALAATFSKLDNAKVR"
     gene            11136..11690
                     /locus_tag="ACJE1S_000482"
     CDS             11136..11690
                     /locus_tag="ACJE1S_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HGG0806052.1"
                     /translation="MNFEAIFQFFGSSSIITYIVLAWLSLYFILSFFILFSRVTYLAA
                     WKNKEKESLEALLLGEKDLSRTRSILRKCTDTSLSHLEIYKNLASRRASNGLTWLSIV
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSNK"
     gene            11701..12090
                     /locus_tag="ACJE1S_000483"
     CDS             11701..12090
                     /locus_tag="ACJE1S_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HGG0806053.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKSTSAPSVKSLIVSINAKKEIFLNQEKYSFVSFADNLAQKKAQLNTDEPVFIRADK
                     SLKYDDVIFVLKSIKNLGFNKVALQTE"
     gene            12094..12870
                     /locus_tag="ACJE1S_000484"
     CDS             12094..12870
                     /locus_tag="ACJE1S_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HGG0806054.1"
                     /translation="MKEYGLGKINSFLLAVAVYVFIIILIFFRLVTHIQPAIQYTDIQ
                     DSFIDIELMEPSKKVVNEQSAPKDIQKPAQELDIEKLFAQTTNKAVKTEDVDQKASNF
                     NELFGSIKEIQEEKTTKIQSSAKSETTSSSKTQASELVKQLNDSLLEEESINQGESIK
                     NQKTGIYDEFLGKVVRTITQRWRQYHPNSENISVKVKIFIDENGNFGYTSVEKSGNSL
                     YDAKVAEFLENQKGKFIAYPPQNKSISITMNLKDEAQIQK"
     gene            12884..14095
                     /gene="tolB"
                     /locus_tag="ACJE1S_000485"
     CDS             12884..14095
                     /gene="tolB"
                     /locus_tag="ACJE1S_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HGG0806055.1"
                     /translation="MKKIVTVFLIFLGILWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     INLKRSFYNIIVNDLKVSSNFEVVSDASSEAANYTFEYDLSKNGNALNLHVKIKAGGL
                     EKSSQTYALNSVEQYPFLAHKSVKASVNALGLAPVEWMDHKILIARNSSSKKSQIIMA
                     DYTLTYQKVIIDGGLNLFPKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKASKILASG
                     GMVVASDVSLDGSKLLVTMAPKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNFIGVDDS
                     KFVFVSDRLGYPNIFIQNLNNGSAEQAVFHGKNNSAVSTYKDFLVYSSREPNQVGVFN
                     IYLMSINSTGIRQFTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFP
                     LKVGKIQSIDW"
     gene            14172..14669
                     /gene="pal"
                     /locus_tag="ACJE1S_000486"
     CDS             14172..14669
                     /gene="pal"
                     /locus_tag="ACJE1S_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HGG0806056.1"
                     /translation="MKKILFSSIAAFALVISGCSTKSTSVSGDTSVDSNRGTGGSDGW
                     DIDSKISQLNDTLGKVYFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAQGVNSDRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            14673..15626
                     /locus_tag="ACJE1S_000487"
     CDS             14673..15626
                     /locus_tag="ACJE1S_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG0806057.1"
                     /translation="MKKIFSVALIGATLLYAESSAFGAGDLTSNSPYGLTSSEKLLKE
                     KLDTLSNNNVQANSRINEIEQRVEGLQSTLEGINSQYAKSNSRLTQLETRFEAMENNL
                     STELQNLKAYVEESRKIQDANNKQIKKILTELSSLVDSINANYVSKDDLNSTNLSIKN
                     TVVVPLSIDDKNITSSDENNASVAPVQEKEVKQIDDSWKKKKNNEILDLAIKDLNNNS
                     YENSKIKLNYLISKQYKPARANFWLGEIEYKQKKYNNAIAYYKKSSALSTKGDYFPKL
                     LYHTAISLDKIGDPKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            15642..16214
                     /locus_tag="ACJE1S_000488"
     CDS             15642..16214
                     /locus_tag="ACJE1S_000488"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG0806058.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYAQPISFILGKGQILE
                     ALEEEVMKLDCPSNADVVIKKDKGLGEYDENAVQVLPKEQFAGIDLKIGMELFGEGEN
                     GETVRVTVKEISDNDVTIDYNHPYAGRDLLFSLNIVDARAASEDELLTGIIAGSHSCG
                     CGSGHGHGHDHHGHGGGGCCGGGGGGCGCH"
     gene            16216..17136
                     /gene="fabD"
                     /locus_tag="ACJE1S_000489"
     CDS             16216..17136
                     /gene="fabD"
                     /locus_tag="ACJE1S_000489"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HGG0806059.1"
                     /translation="MNAVFIFPGQGSQSLGMGKDFYENSKTAKELLENASDFCKIDFK
                     NLLFNENDDLNKSEFTQPAILLNSLMAYSALSELKPDIKAKFALGHSLGEFSALAING
                     AFSFLEATMLVHKRGLFMQEDCAKVEAGMMVILGLDDKKVEELCQKARDEDKKIFAAN
                     YNCDGQIVVAGLKPDLASYEGTFKEAGAKRAMLLNMSVASHCPLLENASNKLCIELEK
                     ILEPTFKAVISNATAKAYTSKQEALELLKTQLVAPVLYKQSIKACENEADCFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIEEFLKVI"
     gene            17137..17823
                     /gene="pfs"
                     /locus_tag="ACJE1S_000490"
     CDS             17137..17823
                     /gene="pfs"
                     /locus_tag="ACJE1S_000490"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HGG0806060.1"
                     /translation="MKIAILGAMSEEITPLLETLKNYTKIEHANNTYYFANYKNHELI
                     LAYSKIGKVNSTLSASVMIEKFGAQVLLFTGVAGAFNPELEIGDLLYATKLAQYDLDI
                     TAFGHPLGFVPGNEIFIKTDDKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKAK
                     IREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKISA
                     NFVLKMCEKL"
     gene            17820..18575
                     /locus_tag="ACJE1S_000491"
     CDS             17820..18575
                     /locus_tag="ACJE1S_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine biosynthesis TtcA family
                     protein"
                     /protein_id="HGG0806061.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALVHL
                     LKRMQAHAPFKFELEAATLSYGMGEDYSGLHAHCEEHGIKHSVIDSNIYEVSGDTIRQ
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELQVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKEHPKLFTSLKTAFANLHTESFWLEKA"
     gene            18580..19101
                     /locus_tag="ACJE1S_000492"
     CDS             18580..19101
                     /locus_tag="ACJE1S_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HGG0806062.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFEKALKIKENILDTLNQIDFNTMH
                     LLLTYDTHDEDYLKSKEGLNLPIEHCIKDSSGWQMPKDFTPFLQKAHKVFHKNTFGSL
                     EFANFIAKSEYEEIHFAGLVSHICVFCNIILAFSAKPNSRLILHQNLSASFDENLEKS
                     AFDLLRAYGIEIL"
     gene            19101..19715
                     /gene="recO"
                     /locus_tag="ACJE1S_000493"
     CDS             19101..19715
                     /gene="recO"
                     /locus_tag="ACJE1S_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HGG0806063.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKELIKAYRFYGLRHSSILNGY
                     KIDFALDENPSFLPRLKDVLHLGFVWIMDREKMLIWQEFIRLLYHHLKDAQVLESFYF
                     ELLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHQEFRCFACDESIENPITLIRAFLP
                     SHHTCALGYAFEKQKLKNFYESKNCAIFGDEEIGNLYQLIKEGL"
     gene            19712..20119
                     /gene="ybeY"
                     /locus_tag="ACJE1S_000494"
     CDS             19712..20119
                     /gene="ybeY"
                     /locus_tag="ACJE1S_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HGG0806064.1"
                     /translation="MILSDEKCEFLEPIASFLSSKDVELVFVESKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKQKAKELGHSLEEEVSLLFIHAMLHLLGF
                     DHEVDNGEMREKEKELIEHFNLPKSLIIRTLED"
     gene            20242..20934
                     /locus_tag="ACJE1S_000495"
     CDS             20242..20934
                     /locus_tag="ACJE1S_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806065.1"
                     /translation="MIVFPLSSFNRYFGNNPLQTLTKIRDESIENGNPELAKKQREEL
                     GNDLIDLYKISKKFSDKIELVEGSIEDKLRNNELPESEVKNLFQWMDKNAKHPRWMHI
                     DGVSYDEAYVKIFHTSKSIDEFKEKYLKLQKKYFVDFNNIDSSQKKLQETSEEDKEKP
                     FKPIQAESKSETYKDDNKMNELLRKLLETKFGTSDELEILFGMKFSDDDAGEFNKILS
                     LNSAPKSVDIKA"
     gene            20970..22208
                     /locus_tag="ACJE1S_000496"
     CDS             20970..22208
                     /locus_tag="ACJE1S_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0814 family flagellar-dependent secreted
                     protein"
                     /protein_id="HGG0806066.1"
                     /translation="MIGINSTFNNSFVNLNIKNNNNSSLNSNTSNANVKNLQDTQDTT
                     KTSNKVLGYEVDKDGFFTSEFNKAAGIPKDYKIYAKGAENFVNYITNLNFKSFTNIDI
                     AKSLGNAYKVFSQLIDEPSGNFTTEDLSKIPLGFSYNKKSFQVTNIYYSEKDFESALS
                     FEDDLKIYQNPKQLTLSFPSWKEKAPADYIKKNSDIFDPSSHINIGASFYKNDNGTIS
                     KGGVLMAFFAGMSGQNPLIEGETTIEGKLLGYDKNMSQSQVEDLNEFINQNPIEWSIT
                     GDVFADSVYITKLRNTITDIDEFKKQWLEMKAKSDEMGEIYKAEIAKQNREIALAQKN
                     SNKEKDKPFEPIQAESKSETYKDDNKMNELLKKLLETKFGTSDELELLFGMKFGDDNA
                     GEFNKILSLNSTPKSIDIKA"
     gene            complement(22229..23155)
                     /locus_tag="ACJE1S_000497"
     CDS             complement(22229..23155)
                     /locus_tag="ACJE1S_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HGG0806067.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKSLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFVSIHGRTRKQLYSGKADYESIANAKASVKIPVIANGDINAQNAKEVYEITKCDGLM
                     IGRASVGNPWIFYEIKSGKNVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GHKDASAFRDSVNRIDNVEEMRKKIEEFFSLT"
     gene            complement(23152..24138)
                     /locus_tag="ACJE1S_000498"
     CDS             complement(23152..24138)
                     /locus_tag="ACJE1S_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806068.1"
                     /translation="MRIRLFFIASFIYIALIFALAWYLELGNYTLNFNTYSFELPIMI
                     WLILPLIPLVFFAIIHMGFYYFLLTLKFKHFFKDSTKFENFTRDLLLEKESNISFQTK
                     EFRQVAQLAKTLKTHEKIPNANKINEILDLIDGIKKEEYFNLNKFKLENNNILFLENE
                     KNHIKNDINYAYSKIKNLSQTQDEFQDLAFESLIKKGTYEQIKNIKITKKPCHILTLI
                     KRFKEGNLELNAAEYEVLLSHNILSEKDYLDIAKLSIKLLNPDAVIGIFNKIKNEKRE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLILREKNIKIDLNQLIQ"
     gene            complement(24135..24488)
                     /gene="dksA"
                     /locus_tag="ACJE1S_000499"
     CDS             complement(24135..24488)
                     /gene="dksA"
                     /locus_tag="ACJE1S_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HGG0806069.1"
                     /translation="MKKNEIQVFKTILENRKKTILENLQSNSKEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISANLKQELEEIEDSLEKIKDGTYGICESCDEEITIERLKIKPHA
                     KYCIVCRENLEKGEL"
     gene            complement(24500..24949)
                     /locus_tag="ACJE1S_000500"
     CDS             complement(24500..24949)
                     /locus_tag="ACJE1S_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HGG0806070.1"
                     /translation="MQVNIFHIQKNDEFKIWGEKYAKLISKFADLKEHNLFNKKIAAA
                     QNLNAQAAKLSYEEAFAPYTKGFCIVLDERGKELTSVEFAKLIADKNNLNFFIGGAYG
                     LRDEFSQSLDFRLSLSKLTLAHQFVKILLLEQIYRAFCINSNHPYHK"
     gene            complement(24951..25793)
                     /gene="accD"
                     /locus_tag="ACJE1S_000501"
     CDS             complement(24951..25793)
                     /gene="accD"
                     /locus_tag="ACJE1S_000501"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HGG0806071.1"
                     /translation="MNFADIFSKIRRQQPSTKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCSYHMRISPMDRIKLLSDENTFVEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSAVISGECLIDGLKIQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITDKTPVVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISVLTDPTMGGVSASFAWLGDLII
                     AEPGALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERSDMKKYLSDTLKF
                     FCGK"
     gene            complement(25808..26524)
                     /locus_tag="ACJE1S_000502"
     CDS             complement(25808..26524)
                     /locus_tag="ACJE1S_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG0806072.1"
                     /translation="MKQFLDACLKANLQISEYLNNICESDLSFCPELGFDNNQSYKLD
                     LKCEKIFIEHLCNLGQIFSEESGLIGENSPYKIILDPLDGSSNFVSKIPFYGTSAALF
                     KDEEAQSAFICNLANHEILIFDDNKNLKSNLFNPNYSPFLPNHFSQIGIVEKITLCPS
                     LTNHLAQNKLKFRSLGATALSIAYAPYFSFVLVLGKTRIFDTAGALMLCKNLYIENNE
                     NFLLISKDKKIFDIILEFLK"
     gene            complement(26524..28740)
                     /gene="bamA"
                     /locus_tag="ACJE1S_000503"
     CDS             complement(26524..28740)
                     /gene="bamA"
                     /locus_tag="ACJE1S_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HGG0806073.1"
                     /translation="MKKIISICALVALSNAAVIKEIKFNGLNHLSNASALNLTGLKIG
                     ETINLDKINTAILNLYKQNYFENIAVEENNGILNIIVTEKPSIAKISITGIASNDRKQ
                     VESILGIKRGTLFDEASAKEASERIKAYYEAKSYFDTIVEYRKKTLENTEGLELEFIV
                     NRGENIVINNVNLSGAKEFSYSDIEPSIVNKEKEFMGWMWGRNDGKLKIFELSNDSAR
                     ISDEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIESISIENPLFSEEEN
                     IQNVKNLRSTQGKLINIEDIRKDVKTIETQSADLGYAFAEVYPDIQKNDQTQEASVVF
                     KVIPHDKVYIRNVIISGNSRTVDRVVRRELYITEGNLYNRTDLSESTNALRRTSYFDD
                     VEIKEEKVDDTHIDLIVNVKEASTGAISGGIGYGSSDGLLLNASLSDTNIFGSGIKSS
                     VSVDKSDDTLSGRISLINPRILDSQYSLGGTLYSNDYEWDNYSEKNYGFDITLGRQFA
                     RYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKTIKSSITPAITFNNTDDYYLPRKGII
                     ASTSLEYAGLGGDQEFLSSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPINQ
                     RIYLGGIRSLRGFESRTVSPKNEWGDEVGGTIAFANSVELSFPLIDRIKLRGSVFFDY
                     GMIGNKNLDEIQRMSTGLGIEWITPIGPLQLVFAKPLNDKKGDDTNTFEFNLGTRF"
     gene            28816..>29609
                     /locus_tag="ACJE1S_000504"
     CDS             28816..>29609
                     /locus_tag="ACJE1S_000504"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HGG0806074.1"
                     /translation="MKVAIIGLGLIGGSLGLCLKENKLISCVYGLDSSKENEQDALNL
                     GLVHELIEFENLHLCDMIFIATPVNAIIEILQKLVNLPSNTTIIELGSTKRKIIEKLP
                     AKLTKQTLFAHPMAGTENSGPKAAFKELYKDAVCVLCDSEVADDLHQKRAVEIFSHLG
                     MRIVFMDSTAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPIMWGSIFEQNKDNVLSSIEFFQKELEFCKKMIEEDKNEELKSW"
BASE COUNT        10450 a         4181 c         5334 g         9644 t
ORIGIN      
        1 ataaaattaa agagaaaagt atgcaaagaa tagttgtaaa agtaggctct catgtgatca
       61 gcgatgagaa tcttttaaat ttaaagcgct ttgagaattt ggtggctttt ttgaccaaat
      121 taatgcaaaa atatgaagtt attttagtta cttcagctgc tatttcagca ggatgtacca
      181 agcttcatat agatagaaaa aatttaatta ataaacaagt tttagctgcg ataggacaac
      241 cttttttaat cagcgtttat aatgaatttt tagccaaatt tggcaaaatg ggtggacaaa
      301 ttttgcttac aggaaaagat tttgattcaa gaaaggcgac taagcatgct aaaaatgcta
      361 ttgatgcgat gattgattta ggaattttgc ctattattaa tgaaaatgat gccacagcta
      421 ttgaagagat tgtttttggt gataatgata gtttaagtgc ctatgcgacg catttttttg
      481 aagctgattt gcttgtgatt ttaagtgata ttgacggttt ttatgataaa aatcctagtg
      541 aatttagcga tgcaaagcgt ttggaaaggg ttgaatttat caaagaagaa tggcttaatg
      601 tgagtgttaa aacaggaagc gagcacggaa caggcggtat agttactaag ctaaaagcag
      661 ctaaattttt attagaaaat cataaaaaaa tgtttttagc aagtggtttt gatttaagtg
      721 ttgcaaaggc atttttgcta gaaaataaac aaataggcgg aactttattt gagtgattat
      781 aaatttttat ttttccttaa gttttgaaga gtaaaataaa ttatgcgcat aattcataat
      841 attaagaaga aatgatgaaa aagtcagtaa aaatacttct ttcagttgct acttttgcat
      901 acgatcctta tacttgctct ttgcaaaatt taattaatcc aggtagctgc aatcctaatt
      961 tagtgcctaa tgatgagtat gcttgctagg ctttacctaa tgttagagta aatggcgagc
     1021 ctgtttgtgt ggagtattat taatgtctat tttagtaaat gctgtagata ctttttattc
     1081 tactaaaaat gaagctgtat tttcagcttc taaaagtgaa aatataaaaa gaaatgtcgc
     1141 agattttaat actgataata atacaaaaaa ttccgtgtat ttttttagtg atgataaaga
     1201 aatttctttg aatttaagca atgaaagcat ggaacttttg acaaatcatt ttagcgcaaa
     1261 tgatttttta aaactttcta atggaaatat aggcttaagc ggaaaagcag ccgcttttgt
     1321 agaaggctgg tataaagata ttatgataaa tagaaatttt ttaaatgccg atagggataa
     1381 aaatggcaga atagaaaata acgagcattt atctttaaaa aattcagtag aagatgtcgc
     1441 aaaaaatcaa gatttaagta agaattttgg ggcagttgtt ttaagaatga ctcaaagtac
     1501 aacaggctat gttgaaaata caattagcga taaaagctta agtatagaag cacttataga
     1561 tgaaagtata aaaagtgata gaaattttga tgggattatt acgaggcttg agtattctgc
     1621 taaaggcggt acagatatgc aaggctatac gaattgggct atagatgctt taaatgatat
     1681 tttagatgat agcgataaag ccaaaaattc atttagttgt cgatcctaca agcaaaattt
     1741 ggcattcgta tgcaggcaaa acattaaatg aggttaaggc ttactatgat aatcctttta
     1801 gagcgacgag tggaacttct gcttctggtt ttttaaatat agtgattgaa gaaccaagaa
     1861 ttttaccaag taatgattta gaaaatgaaa aagagcaatt gcttaatgaa tttcctgaat
     1921 ttagagcttt gatacaaaac aatcccaata ttacaaaaga aaaactttta aaacttaaaa
     1981 atcagcaaag aatcacacac aattatcaag atcatcaaaa acaagatttg caaaaagaat
     2041 ttacacaaaa tttctttaaa acagatctta aggcctaaat tcccttaaaa aattcggcaa
     2101 tttccgcatt taaccttaca aaatttttat aaagatgcac cccgttttga ctggattgag
     2161 ttagctttaa aatcaaattt gttataatca aaaccttgaa ttttatataa agcgaaatga
     2221 tgaaaaaaat tatttttatg ggcacaccaa gctatgcaac ttgtatttta aaagctcttt
     2281 tagaagatga aaattttgag cttttagcgc tttttactca gcctgataaa gctgtgggta
     2341 gaaagcagat tttaacacca agtgatacta aagcattttt gcttcaaaaa gctccacaaa
     2401 ttcctatttt taccccaaat tctttaaagg atgagagcgt tatagagcaa atttgtgctt
     2461 taaagcctga ttttatagta gttgctgctt atggaaaaat tttacctaag gctattttag
     2521 atatagctcc ttgtatcaat ctacacgctt cgcttttgcc taaataccga ggcgctagtc
     2581 caatacaaag cgcgatttta aatgctgatg aaaaaagcgg ggtttgcacg atgcttatgg
     2641 aagaaggact agatacagga gctgtgcttg agagcgtaga atgcgatata agagataaaa
     2701 atgtaaatga agtttttgaa attttagcaa atttagcagc aaagcttact ctttctactc
     2761 ttttaaatta tgaaaaactc cttccaaaaa aacaagatga aagcttagct acacattgta
     2821 aaaagatcaa aaaagaagat gggcttgtga gtttagataa tgcaagagaa atttatcaaa
     2881 aatatctagc ttttacacct tggcccgggg tttttttaga aaatggtttg aaatttatag
     2941 aacttgagct tgtggatgag ttgaagcaaa atgccaaaat gggcgaaatt ttagaacttg
     3001 aaaaggaaag ctttttactt gcttgcaaac aaggaatttt acgcattaaa aaacttcaag
     3061 aaagtggaaa aaaagctctt gatggcagaa cttatttaaa tggaaaaagg cttaaaagtg
     3121 cagatagctt gtgttgaaag tattgattct acccatcttt ttttatgcga gcaaattcgc
     3181 agtggcaaaa tcaatgaaaa ttttgccctt tatgccttaa atcagacaaa gggtgtgggt
     3241 agtagagaaa attcatggca aagttctagc ggaaatttac atctttcttt ttgcattaaa
     3301 gaaggcgatt tgccaagcga tttgcccttg gcttctgtga gtatttattt tgcttatttg
     3361 ttaaaggaaa ttttacaaga aaaaggttct agaatttggc ttaaatggcc caatgattta
     3421 tatttagatg ataaaaaagc gggaggggta ataagcacta aaatttcaga ttttatagtg
     3481 ggcggcatgg gtttaaattt aaaatttgct ccccatgatg cagctttgtg tgatgttgaa
     3541 attttgctta aagatttgat acaagagttt ttacaaagac tagagaaaaa atttttatgg
     3601 aagcatattt ttagcaagta tatgttagaa tttgaaaaat caagacaatt tagtgtccat
     3661 tatgaaggta aggtattttc acttgaaaat gcttttttat atgaggatgg atcaatttta
     3721 ctaggcgata aaagggtgta tagtttaaga tgagtgagat tattactata gcaaatcaaa
     3781 aaggtggagt aggtaaaact acaacagctg tgaatttagc ggcatctttg gcggtagctg
     3841 aaaaaaaagt tcttttaatt gatgtggatc cacaagcaaa tgctacaaca ggcttgggtt
     3901 ttaatcgcaa taattatgaa tataatattt atcatgtttt tataggtaga aaaaaacttt
     3961 ctgacattat tttaaaaaca gaattacccc aacttcatct agctccttca aatataggtc
     4021 ttgtaggcat agagcaagaa cttgcaaaag gcgaaaataa cgaaaaaaaa atgatactca
     4081 aaaaccaaat tcaagaagta cttgatgagt atgattttat tatcatcgat tctccgcccg
     4141 cacttggaag tatcactatc aatgcttttg ttgctagcga tagtgttatc atacctatac
     4201 aatgcgagtt ttatgcgctt gaaggtgtgg caatggtttt aaatacgatt aaaattatta
     4261 aaaaaactat caaccccaaa ttaaaagtgc gaggattttt accgactatg tatagctcgc
     4321 aaaataatct ttctaaagat gttgtagagg atttaaagca aaattttaaa aagcaacttt
     4381 ttaccataaa tggcaatgaa gatgatttta ttgttatccc tcgtaatgta aaactagctg
     4441 aaagcccaag ctttggaaag cctatcatac tttatgatat caaatctcct ggttctttgg
     4501 cttatcaaaa tttagcatat tcgattttag gataaaacaa tgggtcttaa taaaaataga
     4561 ggcttaagca ccttaatggg agatgtagga gaagtttata gtagagaact aggtcttgat
     4621 aaaaaccaag tgagtcttgt agaaatttca aaaattactc caaatccttt tcagccaaga
     4681 aaaacttttg atgaagcagc tttaaatgaa cttgcaaatt ctataaaaga gcatggatta
     4741 atacaaccta taatcgtact taaaaaaaat gatagtttta tcttggtagc cggtgaaaga
     4801 aggcttagag ctactcaaat tttaggcaaa gaaaatatac tggcctttgt gtcagacagc
     4861 gatgagagca agcttagaga attagcactc atagaaaata tacaaagaga aaatttaaat
     4921 cctatcgaac ttgcaaattc ttacaaagac ttaatagagg tttataatat cactcaagaa
     4981 aatttagccg aacttatcca taaaagcaga acccaaatca caaatacttt aagactttta
     5041 aatttagatc ctaaaactca agatctcata gcaagtggta aaatttcaca aggacacgct
     5101 aaggttttag taggcttaga taaagaagat gaaaaagtac ttgtagacag tattttgggg
     5161 caaaaactca gcgtaagaga cacggaaaga cttgttcaaa aggttaagaa taaagaaaac
     5221 acagaagatg tagaatttga aaattctatg caaagtttaa aacagacttt aaataaatta
     5281 ggatttgcat ctaaaaacaa taaaaaggaa ctcattattc gtttggacaa tattgaaaaa
     5341 attaaaaaac tgactgaaat tctcaataaa ttttaacaaa gtattagttt ttatttgtta
     5401 caataaaaga cttataatac cccaaaggag atctatgttt gaagatatgc atccttccat
     5461 aatgcttgct actatggcta tttttttagc tatgatagtg attttaaaca ctatgctata
     5521 caggcccctt ttgaaattta tggatgaaag aaatgattct ataaaaaacg acgaaaacaa
     5581 agtcaaagaa aattcacaag aaatgttagg agcaaacgac gaggttgagg caattcatgt
     5641 gagtacaaga gaagaaatcc ataaaatcaa acaaaatgcc atcaatgcag ccaaagagga
     5701 agctcaacaa gctataaaag ctaaaaagga agagttagag cgtaaaatgg ctaacttcta
     5761 tactgaatta gtatctcaaa aaaaagaact tcaagatcat ttgtcagcac acttgcctga
     5821 ccttaaacaa gctttgcaaa ataatattaa acagcactaa ttaaggagaa agatgaaaaa
     5881 gctattttac tttatttttt tactgccttt atgtgccttt ggtgcatcta atggtagcgg
     5941 agagtatgat attgttccaa gaacaataaa tttcttaatt tttgtagcta tattgtatta
     6001 ttttgtagca aatcctttta aagcttttta taaaaacaga attttaagaa tttctttaaa
     6061 attagacgaa attcaaaaga agcttttgga aagcaaggca aaaaaacttg acacaatgaa
     6121 aaagcttgaa gaagctaaag caaatgcagc agcagcttta gttgtggcaa aaaaagaagc
     6181 agaggtgctt gctcaaaaaa ttaaagaaga aactcaaaat gagcttgctt tacttgagaa
     6241 gcattttgaa gagcaaaaag actatgaatt tagaaaaatg gaaaaagagg ttgtgtcttt
     6301 aactcttaaa gagatttttg aagattcaaa tattgcttta aaacagaatg aaatcattga
     6361 tattatgatg aagaaggtgt cttaatgaat gatctaatag ctaaaagata cgcaaaagct
     6421 atagccttaa gagcagatat ttcagaattt tatgataatt tgtttgtttt aagttcggct
     6481 tttgcttcgc ctaaatttaa aaatatcata gaatcaaatc aaattcaaaa agaaaaaaaa
     6541 ttagaatttg ttatttcttt aatagaaaaa gctagtccta gttttaacaa ctttttaaaa
     6601 ctattagcag aaaattcaag actttcttgc attcctcaaa ttgctaaaga gcttgaaaga
     6661 caaaaatctt ttaaagaaaa tattttttta gggactgttt attctaaaga agtattaagc
     6721 gaagataata tcaaagagct tgaaaataga cttagtacta agtttggtgt taaaattaaa
     6781 ctacaaaata aagtaggttt aaatgaaggt gtgaaaattt cactagaaga attaggttat
     6841 gaaatttctt tttcaatgaa agctcttcaa aacaagatga gcgaatatat actcaaaatt
     6901 atttaaggag aatgtgtaat gaaatttaaa gctgatgaaa tcagttctat cataaaagaa
     6961 agaatcgaaa attttgattt aaatttagag attgaagaaa caggaaaaat tatttcagta
     7021 gctgatggtg tggctaaggt ttatggtctt aaaaatatta tggccggtga aatggtagaa
     7081 tttgacaatg gcgataaagg tatggcatta aaccttgaag aaagtagcgt gggtatagtt
     7141 atacttggaa aaggagaagg cttaaaagaa ggtacttctg taaaacgcct taaaaaactt
     7201 cttaaagttc cagtagggga agctcttatc ggtcgtgtgg tgaatgcact tggtgaacca
     7261 attgacgcta aaggtgttat caatagtaat gaatttagat ttgtagaaga aaaagctaaa
     7321 ggtatcatgg ctagaaaaag tgtacatgaa cctttacata cagggattaa agctatagat
     7381 gcattggtgc caattggtcg tggccaaaga gagctcatca taggcgatag acaaacaggt
     7441 aaaactactg tagctgtaga tactatcatt tctcaaaaag gacaaggagt tgtttgtatt
     7501 tatgtagcca taggacaaaa gcaaagcaca gtggctcaag ttgtaaaaag acttgaagag
     7561 catggagcta tggattatac tatagttgta aatgcgggtg cttcggatcc agcagcactt
     7621 caatacctag caccttatac aggtgtaact atgggtgagt tttttagaga taatgcaaaa
     7681 cacgctttaa ttgtttatga tgatttgagt aagcatgctg tggcttatcg tgaaatgtct
     7741 ttgattttac gccgtcctcc aggtcgcgag gcttatcctg gtgatgtttt ctatcttcac
     7801 tcaagacttt tagaaagagc tagtaaatta aatgatgagt taggtgcggg ttctttaaca
     7861 gctttaccaa tcatcgaaac tcaagcgggc gatgtttcag cttatattcc aaccaatgtt
     7921 atttcgatca ctgatggaca aattttctta gaaactgatt tatttaactc aggaattcgt
     7981 ccagctatca atgtgggtct atcggtttct cgtgtgggtg gtgcggctca aattaaagca
     8041 actaaacaag tttcaggaac tctaagactt gatcttgcac aatatagaga actccaagct
     8101 tttgctcaat ttgcaagtga tttggatgag gcaagtagaa aacaacttga acgcggacaa
     8161 agaatggttg agttattaaa acaacctcct tattctccac ttagtgttga aaaacaagtg
     8221 gttttaattt ttgcgggaac aaaaggttat ttggatgatg tagctgtttc aaaaatcaga
     8281 gaatttgaag atggaattta tccatttata gaagcaaaat atccagatct ttttgagcaa
     8341 attcgttcga aaaaagcttt agatgcagag ttagaagaga aattagctaa agcaataaac
     8401 gagtttaaag caaaccattt ataaggttct tttatgtcta atttaaaaga aattaaaaga
     8461 aaaataaaaa gcgtccataa tacgcaaaaa acaaccaatg cgatgaagct tgtttctact
     8521 gccaaattaa aaaaggcaga agaagcagca aaaagatcta gagtttatgc gcaaaaaatc
     8581 gatgagattt taagtgaaat ttcttttcaa gtcaataaga ttgttcacaa tgaagaggat
     8641 tcaagatttg ttttatttca taagaaaaat caaatcaaaa atgtagatct gatctttata
     8701 acagcagata aaggactttg tggcggtttt aatatcaaaa ccctaaaggc tgtaagtgaa
     8761 cttttaaaag aatatgaaga aaaaaatatc aatgttcgct taagagctat tggaaaaaca
     8821 ggaattgagt attttaattt tcaaaaaata gagcttttag aaaaatatct tggcttgagc
     8881 tcaagtcctg attatgataa agcttgctct gttattcaag ctgctgtaga tgattattta
     8941 aatggaataa ctgatgaagt tgttctagtg cataatggat ataaaaatat gattacacaa
     9001 gaattaaaaa tttctcatct aatcccagta gagccaaagc aaatcgaagg aaactcgaat
     9061 tcgcttttag aacttgaacc tgaagataca gatctcttgg gagatttgat gaaaacatat
     9121 tttgaataca atatgtatta tgcattaatt gattctttgg ctgcagaaca tagtgcgaga
     9181 atgcaggcta tggataatgc caccaataat gcaaaagcta gggttaaaca gcttaattta
     9241 gcttacaata aagcaagaca agaatctatc actactgaac ttattgaaat tatcagtggt
     9301 gttgagtcaa tgaaatagta aaatttttaa ggagagtata aataatgcaa ggatttattt
     9361 cacaagtatt aggtccagtt gttgatgtag attttaacga ctatttgcct caaattaatg
     9421 aagccattgt tgtaaatttt gaaagtgaag gcaaaaaaca aaaacttgtt ttagaagtag
     9481 cagcacactt gggcgataat agagttagaa ctattgctat ggatatgaca gatggcttgg
     9541 taagaggact taaagcagaa gctttgggtg ctcctattag cgttcctgtg ggtgaaaaag
     9601 ttttaggaag aatttttaat gttacgggag atttgatcga cgagggtgaa gaagttgctt
     9661 ttgataaaaa atgggcaatt catagagatc caccagcttt tgaagatcaa agtacaaaaa
     9721 gtgagatttt tgaaacaggg attaaagttg tggatttgct tgctccttat gcaaaaggtg
     9781 gtaaagtagg gctttttggt ggtgctggcg ttggtaaaac agttattatt atggagctta
     9841 ttcacaatgt tgcgtttaaa catagcggtt attcagtatt tgcgggtgtt ggcgagagaa
     9901 ctcgtgaagg aaatgacctt tataatgaga tgaaagaaag taatgtttta gacaaagttg
     9961 ccttatgtta tggacaaatg aatgaaccac caggggcaag gaatcgtatt gctttaacag
    10021 gtcttactat ggctgagtat tttagagacg aaatgggtct tgatgttttg atgtttatcg
    10081 ataatatctt tagattttca caatcaggct ctgaaatgtc tgcgctttta ggaagaattc
    10141 cttcagctgt gggttatcaa ccaactctag caagtgaaat gggtaaattc caagaaagaa
    10201 tcacttcaac taaaaaggga tcaattactt cagttcaagc agtttatgtt ccagcagatg
    10261 acttaacaga cccagctcca gcaactgttt ttgctcactt agatgctaca actgttttaa
    10321 atagatctat tgctgaaaaa ggtatttatc ctgcggttga tccacttgac tcaacttcaa
    10381 gaatgcttga tcctcaaatt attggcgaag aacactataa agttgcgcgt ggtgttcaat
    10441 ctgtacttca aaaatataaa gatttgcaag atatcattgc aattttgggt atggatgaat
    10501 taagcgaaga agataaattg atcgttgaaa gagcaagaaa aattgaaaaa ttcttatcac
    10561 aaccattctt cgttgcagaa gtatttacgg gtagccctgg aaaatatatt tctcttgagg
    10621 aaaccattgc aggctttaag ggaattttag aaggtaaata cgatcactta ccagaaaatg
    10681 ctttctatat ggtgggtaat attgacgaag ctattgcaaa agcagataaa ctgaaaggtt
    10741 aatttatgga caatttaatc agttttgaaa tagttacacc tatgggtgtg atttatcaag
    10801 gggaggtaaa atcagttacc ttgccaggaa gtgaaggaga atttggagta cttaaaggac
    10861 atgctgcttt agtttcatct ttaaaatctg gtgtaattga tatagaaaaa gctgatttaa
    10921 atcatgaatt aatcgcaatt gatgcaggtc atgctaaggt agatgaagat aagatcagtg
    10981 ttttggctaa gggcgcggtt tggatttcag gttctagcga aagcgaaatc gaaaaaaatc
    11041 ttgaaagcgc taaagaatta atcaaatcta tgagttcaga caatacagct ttagctgcta
    11101 ccttttcaaa gcttgacaat gcaaaggtta ggtagatgaa ttttgaagcg atatttcagt
    11161 tttttggaag ttcaagcata attacttata tagtcttagc ttggctttcc ttatatttta
    11221 tactttcttt ttttatactt ttttcaagag tgacttattt ggcagcttgg aaaaataaag
    11281 aaaaagaaag tttagaagct ctactcttgg gagaaaaaga tttgagtaga acgcgttcta
    11341 ttttaagaaa gtgcacagat actagtttat cacatcttga gatttacaaa aatttagcaa
    11401 gtcgtcgcgc atccaatggg cttacttggc ttagtatagt agcttcaacc tctccattta
    11461 taggactttt tgggactgtt atttctatac ttgagacttt tggtggttta gggacgcaaa
    11521 attctttaag tattattgca cctaagatca gtgaagcttt agttgccaca ggctgtggta
    11581 ttttggttgc tattcctgct tatacttttc atcttattat taaaagaaag gcttttgagc
    11641 tcttaagtat aattgatagt gagattaaag ttattagttc taacaaatag gatttaagat
    11701 atgccatttg acgatgagaa gccagagctt aatataactc ctttggttga tatcatgctt
    11761 gttttattgg ctattttaat ggtaacagct ccaagcatta cttatgaaga aaaaatcaat
    11821 cttcctcaag gaagtcaaaa atccacaagt gctcctagtg ttaaaagctt aattgttagt
    11881 attaatgcta aaaaagagat atttttaaat caagaaaaat atagttttgt aagctttgca
    11941 gataatcttg cgcaaaaaaa agcacaattg aataccgacg aaccggtatt tattagggct
    12001 gataagagtt taaaatacga tgatgttatt tttgttttaa aaagtattaa aaatttgggc
    12061 tttaataaag tcgccttgca aacagaataa gctatgaaag aatatggtct aggcaagata
    12121 aattcatttt tgcttgctgt tgcggtttat gtttttatta taattcttat tttttttaga
    12181 ctcgtaaccc acatacaacc tgcaatccaa tatacggata ttcaagatag ttttatcgac
    12241 atagagctta tggaaccctc aaaaaaagtc gtaaatgagc aaagcgctcc taaagatatt
    12301 caaaaacctg cccaagagct tgatattgaa aaactttttg cacaaactac aaacaaagca
    12361 gtaaaaactg aagatgtgga tcaaaaagcc agcaatttta atgagctttt tggtagtatc
    12421 aaagagatac aagaggaaaa aactactaaa atacaatcaa gcgctaaatc agaaacaaca
    12481 agcagttcaa aaactcaagc ttcagagctt gtaaagcaat taaacgatag cttacttgaa
    12541 gaagaaagta tcaatcaagg cgaaagtatt aaaaatcaaa agacagggat ttatgatgag
    12601 tttttgggaa aggtggtgcg caccatcacc caaagatgga gacaatatca tcctaatagt
    12661 gaaaatattt cagtcaaggt aaaaattttt attgatgaaa atggaaattt tggctatact
    12721 tcagtcgaaa aaagcggaaa ttctttatac gacgcaaaag tagccgaatt tttagaaaac
    12781 caaaaaggta aatttatagc ctatccacct caaaataaaa gcataagtat tactatgaat
    12841 ttaaaagatg aggcgcaaat tcaaaaataa ttgaggagta aaaatgaaaa aaattgtaac
    12901 agtattttta atttttttag gaatactttg ggcagaagat cctgtgattg atgtcgtaaa
    12961 ttcaggcgta gtcttaccaa aaatcattgt taaagacaat tcgaatttaa gtgatattaa
    13021 tttaaagcgt agtttttata atatcattgt aaatgacttg aaagtaagtt caaattttga
    13081 agttgtaagt gatgcaagtt cagaagctgc aaattacact tttgaatacg atttgagtaa
    13141 aaatggcaat gctttaaatt tgcatgttaa gatcaaagca ggaggcttgg aaaaatcaag
    13201 tcaaacctat gctttaaata gtgtagagca gtatcctttt ttggcccaca aaagcgtaaa
    13261 agcttcggta aatgcattag gacttgctcc tgttgaatgg atggatcata aaattttaat
    13321 tgccagaaat tcaagctcta aaaaaagtca aattatcatg gccgattata ctttaacata
    13381 tcaaaaagta atcattgatg gaggattgaa tttatttcct aaatggggaa ataaagaaca
    13441 aagtattttt tactataccg catacgatca tgatagacca acgctttatc gctatgactt
    13501 aagaactaat aaagcaagta aaattttagc aagtggaggt atggttgtag caagcgatgt
    13561 aagcttagat ggtagtaagt tacttgtgac tatggctcca aaagatcaac ctgatgttta
    13621 tttgtatgat ttaaattcta aaaatttaac tcaacttacg aattattcag gcatagatgt
    13681 aaatggaaac tttataggcg tagatgatag taaatttgtt tttgttagcg atcgcttggg
    13741 ttatcctaat atttttatac aaaatctcaa taatggatct gccgaacaag cagtttttca
    13801 tggtaaaaat aattctgcag tttcaaccta taaagatttt ttagtatatt ctagtcgtga
    13861 gccaaatcaa gtaggtgttt ttaatattta tttaatgtca atcaatagca caggtattcg
    13921 tcaatttacc gcaaatggaa agaatttatt tcctagattt tcaagtgatg gtggtagtat
    13981 agtttttatc aaatatctcg gagcacagag tgctttaggt gttattcgtg ttaatgcaaa
    14041 caagactttt tattttccat taaaagttgg gaaaattcag tctattgatt ggtaaaaatt
    14101 tgtaattttt ggttaaattt aattaatttt agatataatg ctaacaattt attaactttg
    14161 aaaggtcata aatgaaaaaa attcttttta gttctattgc agcatttgca ttggttatca
    14221 gtggttgtag cacaaaaagc actagcgtaa gtggtgatac aagtgtagat tcgaatcgtg
    14281 gaacaggtgg tagtgatggt tgggatattg attcaaaaat ttctcaactt aatgatactt
    14341 taggaaaagt atattttgat tttgataaat ttaatatccg cccagatatg caaaatgttg
    14401 ttaatacaaa tgctaatatc ttcaacaatg aagtaagcgg tgtaagcatt actgttgaag
    14461 gtaattgcga tgagtgggga acagatgagt ataatcaagc tttaggttta aaaagagcaa
    14521 aagcagttaa agaagcttta attgctcaag gtgtaaattc tgacagaatt gctgttaaaa
    14581 gctatggtga aacaaatcca gtatgcacag aaaaaacaaa agcttgcgat gctcaaaatc
    14641 gtcgtgcaga atttaaacta tcaagataat tgatgaaaaa aatattctca gtagctctta
    14701 tcggagctac tttactttat gcagaaagct ctgcttttgg tgcaggagat ttaaccagta
    14761 attcccccta tggtttaaca tcaagtgaaa aattactcaa ggaaaaatta gatactttaa
    14821 gcaataataa tgttcaagca aattctagaa ttaatgagat tgaacaaaga gttgaaggat
    14881 tgcaaagtac tttagagggt ataaattcgc agtatgccaa atccaattct agattaacgc
    14941 aacttgaaac ccgttttgaa gctatggaaa ataatttaag cacagaactt caaaatttaa
    15001 aagcttatgt tgaagaaagt agaaaaattc aagatgctaa caataagcaa attaagaaaa
    15061 ttttaaccga attaagttct ttggttgatt ctattaacgc aaattatgtg tctaaagatg
    15121 acttaaatag tacgaattta agtatcaaaa atacagttgt tgtacctcta tcgatcgatg
    15181 ataaaaacat aacttctagc gatgaaaaca atgccagtgt tgctccagtg caagaaaaag
    15241 aagttaaaca aatagatgat tcttggaaaa agaaaaaaaa taacgaaatt ttagacttgg
    15301 ctatcaaaga tttaaataat aattcttatg agaatagcaa aattaagtta aactatctca
    15361 tatcaaaaca atacaaacct gcaagggcaa atttttggtt aggagaaatt gagtataagc
    15421 aaaagaaata caataatgct attgcttatt ataaaaaaag ttctgctttg agcaccaaag
    15481 gggattattt tccaaagctt ttatatcaca cagcgatttc tcttgataag ataggagatc
    15541 caaaaacagc taatgggttt tataaggctt taaagacaaa ttatcctaat tcaccggaag
    15601 caaaagcttc ccccaataga aaataatatc aaggagaaaa aatggctata gaaaaaaata
    15661 gcgtagtttc aatgttttat gaattaaaag atgcaaatac aaatgaagtt ttagaatcaa
    15721 atttatatgc tcaaccgatt tcttttatct taggcaaagg gcaaatttta gaagctttag
    15781 aagaagaagt gatgaagctt gattgcccta gcaatgctga tgtcgtgatt aaaaaagata
    15841 aaggcttggg cgaatacgat gaaaatgcag tgcaagtttt accaaaagag caatttgcag
    15901 gcattgattt aaaaataggt atggagcttt ttggcgaggg tgaaaacgga gaaaccgttc
    15961 gcgtaactgt taaagaaatc agcgataatg atgtaactat tgattacaat catccttatg
    16021 caggtcgtga tttgcttttt tctttaaata tagtagatgc cagagcagca agtgaagatg
    16081 agcttcttac aggcattata gcaggaagcc atagttgtgg ttgtggaagc ggacatgggc
    16141 atggacatga tcatcacggg catggcggtg gcggatgctg cggtggcggt ggcggtggat
    16201 gtggttgcca ctaagatgaa tgctgtattt atttttccag gtcaaggctc tcaaagtctt
    16261 ggcatgggta aagattttta tgaaaactcc aaaaccgcaa aagaacttct agaaaatgcc
    16321 agcgattttt gtaaaattga ttttaaaaat ttattgttta acgaaaatga tgatttaaac
    16381 aaaagtgaat ttacacaacc tgctatactc ttaaattctt taatggctta tagtgctttg
    16441 agtgaattaa aacctgatat taaggctaaa tttgctttgg gtcattcctt gggtgaattt
    16501 tcagctttgg cgatcaatgg tgcttttagc tttttagaag caactatgct tgtgcataaa
    16561 agaggacttt ttatgcaaga agattgtgca aaagttgaag cgggtatgat ggtaatttta
    16621 gggcttgatg ataaaaaagt ggaagagctt tgtcaaaaag ctagagatga ggataaaaaa
    16681 atttttgcag ctaattataa ctgcgatggg caaatcgttg ttgcaggttt aaaacctgat
    16741 ttagcaagct atgaaggcac atttaaagaa gcaggcgcta aaagagctat gcttttaaat
    16801 atgagcgtgg caagccattg tccgctttta gaaaacgcgt ctaataaact ttgcatagag
    16861 cttgaaaaaa tactagagcc tacttttaaa gctgtaattt ctaatgctac agctaaagct
    16921 tatacgagca aacaagaagc tcttgagctt ttaaaaaccc aacttgtagc tcctgtgctt
    16981 tataaacaaa gcattaaggc ttgtgaaaat gaagcagatt gttttataga atttggcgct
    17041 agtgtgctta aaggtttgaa taaaaaaatc acttcaaaag aaacttatgc tttaacaaat
    17101 atgaatgata tagaagaatt tttaaaggta atataaatga aaatagcaat tttaggtgca
    17161 atgagtgaag aaatcactcc tttgcttgaa acacttaaaa attatacaaa aatagaacac
    17221 gctaataata cttattattt tgcaaactat aaaaatcatg agcttattct tgcttattct
    17281 aagataggca aggtaaattc taccctaagt gctagcgtaa tgatagaaaa atttggcgcg
    17341 caagttttac tttttacagg agttgcaggt gcttttaatc ctgaacttga aattggtgat
    17401 ttgctttatg caacaaaatt agctcaatat gatcttgata tcactgcttt tggacatcct
    17461 ttgggttttg ttccaggaaa tgaaattttt ataaagacag acgataaatt aaacaatctt
    17521 gctttagaag tcgcaaaaga attaaatatc aaacttcgtg caggtattat cgcaacgggt
    17581 gatgaattta tttgtgatga ggcaaagaaa gcaaaaatca gagaaatttt caatgcggat
    17641 gcttgtgaaa tggaaggcgc aagtgtggct ttggtttgtg atgctttaaa ggtgccttgt
    17701 tttatcttaa gagccatgag tgataaagca ggggaaaagg ctgaatttga ttttgatgaa
    17761 tttgtgatca attcagctaa aatttcagcc aattttgtgc ttaaaatgtg tgagaaatta
    17821 tgataaatct tagtaaaaaa ctgatccgtc aagttgcaca agctaatgct aaatttggac
    17881 tcattaaaga tggagatagg gttcttttag gacttagcgg gggaaaagat tctttagctt
    17941 tggttcatct tttaaaaaga atgcaagctc atgcaccttt taaattcgag cttgaagcag
    18001 cgactttaag ctatggtatg ggtgaggatt actcagggct tcatgcgcat tgtgaggagc
    18061 atgggatcaa acacagcgtg attgattcaa atatctatga agtttcaggc gatacgataa
    18121 gacaaaattc aagcttttgt agctattttt caagaatgcg ccgaggtgct ttgtatactt
    18181 atgctcttga aaaaggtttt aataaattag ctatcgcgca ccatttagat gatgcagctg
    18241 agagcttttt tatgaatttt atccataatg gagctttaag aactttagcg cctatttatc
    18301 aaagcaaacg aggtattacg gttatacgcc ctttgatttt tgtgcgcgaa agacaactta
    18361 gagataatgc tacacaaaat gaacttcagg ttataggaaa tgaattttgc cctggtatga
    18421 aactaagcga aaaaaatgta aaatttccac atgcaagaga agaagcaaag caacttttag
    18481 ctaatttaga aaaagaacat cctaagcttt ttacgagttt aaaaaccgct tttgcaaatt
    18541 tacacacaga aagtttctgg ctagaaaagg catagtttaa tgaaaaaagc ttttgttttg
    18601 gtggattatc aaaatgattt tatcgatggg agcttgggct ttgaaaaagc tttaaaaatc
    18661 aaagaaaata ttcttgatac tctcaatcaa atcgatttta acaccatgca tttgcttctt
    18721 acttatgata ctcatgatga ggattattta aagagcaagg aagggttaaa tttgcctatc
    18781 gaacattgta taaaagatag ctcgggttgg caaatgccta aagattttac tccctttttg
    18841 caaaaagctc ataaggtttt tcataaaaat acttttggaa gtttagaatt tgcaaatttt
    18901 atcgcaaaaa gtgaatacga agaaatccat tttgcaggac ttgtttccca tatttgcgtc
    18961 ttttgtaata tcattttagc ttttagcgcg aagccaaatt caagacttat actccatcaa
    19021 aatttaagtg caagttttga tgaaaattta gaaaaatccg cttttgatct acttagagct
    19081 tatggcattg aaatacttta atgcaaggct ttatacttca tacgcaaaaa gtaaaagatg
    19141 aggatttgat tgtttatatt ttaagcccta aagagcttat caaggcgtat cgtttttatg
    19201 ggcttagaca ttctagtatt ttaaatggtt ataaaattga ttttgcttta gatgaaaatc
    19261 ctagcttttt gccaagactt aaggatgttt tgcatttggg ttttgtatgg attatggatc
    19321 gtgaaaaaat gctgatttgg caggaattta tccgtcttct gtatcatcat ttaaaagatg
    19381 ctcaagtact tgaaagtttt tattttgagc ttttagatga atgtgtaaag cgttttgaaa
    19441 agcaaaatcc caagcgcgtg attgtggacg cttatcttaa gattttagaa tttgagggaa
    19501 gactccatca agaatttaga tgttttgctt gtgatgaaag catagaaaat cccatcactt
    19561 taattcgtgc ttttttgcct tcgcatcaca cttgtgcttt aggttatgca tttgaaaagc
    19621 agaaattaaa aaatttttat gaaagtaaaa attgtgcgat ttttggtgat gaagaaatag
    19681 ggaatttgta tcaattgatc aaggagggtt tatgatatta agtgatgaaa aatgcgaatt
    19741 tttagagcct atagcaagtt ttttaagctc taaggatgtg gaacttgttt ttgtagaaag
    19801 taaggaaatg caagagatta acttagagca aagaaagcaa gataaaacca ccgatgtgct
    19861 ttcttttcca cttgaaaata tcgatgagag cttgcctttg ggttctgttg tgatcaatgt
    19921 ggatttggca aagcagaagg ctaaagagtt aggacatagt cttgaagagg aagtaagctt
    19981 gctttttatc catgccatgc ttcatttgct tggatttgat catgaggtag ataatggaga
    20041 aatgagagaa aaagaaaaag aacttataga acactttaat ttgcccaaaa gtttgattat
    20101 aaggactttg gaagattaag taagattttt tcaagggcta gaagacttgc gctttatatt
    20161 ttaaatatat gagtaaaaat attaaaaaaa tcattttttg ccgatttact ttagaataaa
    20221 atctattcca aggtgataaa gatgatagta tttcctctaa gctcttttaa tagatatttt
    20281 ggaaacaatc ctttgcaaac acttaccaaa ataagagatg aaagtattga aaatggaaat
    20341 cctgagcttg caaaaaaaca aagagaagaa ttaggtaatg atttgataga tttgtataag
    20401 atttctaaaa aattcagcga taaaatagaa ttagtcgagg gttcaataga agataaactt
    20461 agaaacaatg aattaccaga atcagaagtt aaaaatttat ttcaatggat ggataagaat
    20521 gccaaacacc ctcgttggat gcatattgat ggggtgagtt atgatgaagc ttatgttaaa
    20581 atttttcaca caagcaaaag tatagatgaa tttaaagaaa aatatcttaa gcttcaaaaa
    20641 aaatattttg ttgattttaa caatattgat tcatcacaga aaaaactgca agaaacttca
    20701 gaagaagaca aagaaaagcc ttttaagcct atacaagcgg aaagtaaaag cgaaacctac
    20761 aaagatgata ataaaatgaa tgagctttta agaaaactac tagaaactaa atttggcaca
    20821 agtgatgaat tagaaattct ttttggtatg aaatttagcg atgatgatgc aggagaattt
    20881 aataaaattc tttctttaaa ttctgcacca aaaagcgtag atattaaggc ttaaaaatat
    20941 aaaaatttaa attataaaaa ggattaaaaa tgataggtat caactcaact ttcaataact
    21001 cctttgtcaa tcttaatatt aaaaacaata acaactcttc cttaaattca aatacttcaa
    21061 atgctaatgt aaaaaattta caagacaccc aagacactac taaaacaagc aataaagtct
    21121 taggttatga agtagataaa gatggctttt ttacaagtga atttaataaa gcagcaggaa
    21181 ttccaaaaga ttataagatt tatgctaaag gtgctgaaaa ttttgttaat tatatcacta
    21241 accttaattt taaatctttt accaatatag atattgccaa aagtttaggt aatgcttata
    21301 aggttttttc acagcttatt gatgaaccga gtggaaattt tactactgaa gatttaagca
    21361 aaatcccttt gggattttct tataataaaa aaagttttca agtaacaaat atttattatt
    21421 ccgaaaaaga ttttgagagt gctttaagtt ttgaagatga cttaaaaatc tatcaaaatc
    21481 ctaagcaatt aaccctaagt ttcccaagct ggaaagaaaa agctcctgct gattatatta
    21541 aaaaaaatag cgatatattt gatccaagct ctcatataaa tattggagca tcattttata
    21601 aaaatgataa tggcactata agcaaaggtg gtgttttaat ggcattcttt gcaggtatgt
    21661 caggacaaaa tcctcttata gaaggtgaaa caactataga gggaaagctt cttggctatg
    21721 ataaaaatat gagccaaagt caagtggaag atttaaacga atttataaat caaaatccta
    21781 tcgaatggag tataacagga gatgtatttg cagatagtgt atatataacc aaacttagaa
    21841 atacaataac tgatatagat gaatttaaaa aacaatggct agaaatgaaa gccaaaagtg
    21901 atgaaatggg ggaaatatat aaagctgaaa tagcaaaaca aaatagagaa attgctctag
    21961 cacaaaaaaa ttcaaacaaa gaaaaagata aaccctttga acctatacaa gcagaaagta
    22021 aaagcgaaac ctacaaagat gataataaaa tgaatgagct tttaaaaaag ttactagaaa
    22081 ctaaatttgg cacaagtgat gagctagaac ttctttttgg tatgaaattt ggtgatgata
    22141 atgcagggga atttaataaa attctttctt taaattctac accaaaaagt atagatatta
    22201 aggcttaaga ttttttaaat tataaaaatc aagttaaact aaaaaattct tctatttttt
    22261 ttcgcatttc ttcgacattg tcgatgcgat taacactatc tctaaaggct gaagcatctt
    22321 tatggccttt ggaatactcg tgtaaatgtt tacgaaatat actcacacct tgatctttat
    22381 agtgttttat catttcgtca aaatgagtga gtatgatttc ttttttgagt ttttcatcta
    22441 catttttacc acttttgatt tcataaaata tccaaggatt tcccacactt gcacgcccta
    22501 tcataagtcc atcacatttt gtgatctcat aaacctcttt agcattttga gcattgatat
    22561 caccatttgc gatcacagga attttcacgc ttgctttagc attggcaatg gattcataat
    22621 ccgcttttcc actataaagc tgttttcttg tgcgtccatg aatacttaca aaatccaccc
    22681 ccaagctttc gcaaatttta gccatttttt cgggatattt ttcattaaag cctaagcgaa
    22741 atttaacact tgtaaggctt tttttattgt tttctttaat cactcccaca aggcttttaa
    22801 aaagctctaa attttctagc agagcacttc ctgcacattg tttgacgact ttatttacag
    22861 gacaaccaca attaaagtca atgccatcta caaaatccat ttcattaagc atttgaactg
    22921 cttttttaag cacttcttta tcgccccctg caatttggac tatataaggg ttttcaagtt
    22981 cagctctttc tagcatatgt aaggttttag agctttcata aactaaagca ttggaactta
    23041 tcatttcact tattgtgata tctgcaccaa atttttttac cacattgcga aaaggcaggt
    23101 ctgaaaaacc cgccatagga gctaaaaata aaggcttttt gctaaaatct atcattgtat
    23161 aagctgattt aaatcgattt tgatattttt ttcacgcagg attaaaaagg ctttaaaatc
    23221 attgaatttt ttgtcatcat tatgaatttg ttctctgagt tcatctaaaa gtccaaattc
    23281 agctaaaaga tataaatacg ctcttaaagc ttcacgtttt tcatttttga ttttgttaaa
    23341 aattcctata actgcgtcag gatttaaaag cttgatgctt agttttgcta tatcaagata
    23401 gtctttttca ctaaggatat tgtgagaaag taaaacttca tattcagcag cattaagctc
    23461 taaatttcct tctttaaaac gcttgatgag tgtaaggata tgacaaggtt tttttgtgat
    23521 tttgatattt ttaatttgct cataagttcc tttttttatc aaactttcaa aagccagatc
    23581 ttggaattcg tcttgagttt gactaaggtt tttgattttg gaataagcat aatttatatc
    23641 atttttgata tgattttttt cattttctag aaataagata ttattatttt cgagtttaaa
    23701 tttgttaaga ttgaagtatt cttctttttt aatgccgtct ataagatcta aaatttcatt
    23761 gattttgttt gcattaggga ttttttcatg tgtttttagg gttttagcta gctgtgctac
    23821 ttgtctaaat tcctttgttt gaaagctgat atttgattct ttttccaaaa gaaggtcgcg
    23881 ggtaaaattt tcaaatttgg tagaatcttt gaaaaaatgc ttaaatttta aagtgagtaa
    23941 aaaataataa aaacccatat gaatgatggc aaaaaacact aaaggtatca aaggtaaaat
    24001 aagccatatc attataggta gctcgaagct atatgtattg aaatttaaag tataatttcc
    24061 taattctaaa taccaagcaa gagcaaatat aagagctata taaataaagc ttgctataaa
    24121 aaataatcta attctcataa ctctcctttt tctaaatttt cgcggcatac gatgcagtat
    24181 tttgcatgag gtttgatttt aagtctttct atggtgattt cttcatcgca agattcgcat
    24241 attccataag tgccatcttt gattttttct aaagaatctt ctatttcttc taattcttgt
    24301 tttaaattag cactgatagc aaaatcaatt tgcgatcctg tttcaataac agaaaaatcc
    24361 acactatcac ttgggacgct attatgtaag gcttcaattt ctttagaatt gctttgcaaa
    24421 ttttccaata tagttttttt tctattttct aagatagttt taaaaacttg tatttcattc
    24481 tttttcattg tttaaccttt tatttgtgat aaggatgatt tgagttgata caaaaagcac
    24541 gataaatttg ttctaaaagt aaaattttta caaattgatg tgctaaggtg agtttgctta
    24601 aagaaagtct aaaatctaaa ctctggctga attcatccct taagccgtaa gcaccaccta
    24661 taaaaaaatt taaattattt ttatctgcta tgagttttgc aaattctacg cttgtaagct
    24721 ccttgcctct ttcatcaaga actatgcaaa agccttttgt ataaggagca aatgcctctt
    24781 catagcttaa tttagcagct tgtgcattta aattttgcgc agcagctatt tttttattaa
    24841 agagattgtg ttctttaaga tctgcaaatt tggagataag ttttgcgtac ttctcacccc
    24901 aaattttaaa ttcatcgttt ttttgtatgt gaaaaatatt aacttgcaag ttattttcca
    24961 caaaagaatt taagagtatc gctaaggtat tttttcatat ctgaacgctc tactatcgca
    25021 tctatgagtc catgttcgag tagaaattca gctttttgga agccttcggg taaatctgca
    25081 cctatggttt gtttaatcac tcttgctcct gcaaaaccca ccaaagcgcc tggttcagcg
    25141 atgattaaat ctccaagcca agcgaaagaa gcgctcacgc ctcccatagt aggatcggtt
    25201 aatacgctga tataagggag tttttctttg cttaaaagtt ttaaagcagc gcttgtttta
    25261 ctcatttgca tcaaagaata agtactttct tgcattctag ctccaccgct tgcacttacg
    25321 ataacaacag gagttttatc tgtgatagct ctttggattg ccctaacgat tttttcgcct
    25381 tctacagagc ctaaagatcc tcccatgaaa gaaaaatcaa acaccacaag ctgaatttta
    25441 agtccatcta taagacattc tccgctaatg actgcagact ttctaccggt tttgctttcg
    25501 ccttcgctca agcgtttttt ataagacttg ctgtcaacaa atttgagcgg atctatggct
    25561 tctaaatttg catcatactc aacaaaggta ttttcatcac ttaaaagctt gattctatcc
    25621 ataggagaaa ttctcatatg ataagagcat ttagggcata cattaaaaca agattctatt
    25681 tctttataat acattaaagc atggcaactc tggcatttta cccaatgatt tggagcctct
    25741 ttggtgctag gttgttgtct tctgattttt gaaaaaatat ctgcaaaatt cataataatt
    25801 cacctaatta ttttaaaaat tccaagatta tatcaaaaat tttcttatct ttacttatga
    25861 gaaggaaatt ttcattgttt tctatatata aatttttaca caacatcaaa gctcctgcag
    25921 tatcaaagat tcgagttttt cctaaaacta aaacaaagct aaaatatgga gcataagcaa
    25981 tgcttaaagc tgtagcgccc aaagagcgaa atttaagctt attttgtgca aggtggttgg
    26041 taagacttgg gcaaagcgtt attttttcta cgattccaat ttgagaaaaa tgattaggca
    26101 aaaaaggaga atagttagga ttgaaaagat ttgattttaa atttttatta tcatcaaaaa
    26161 ttaaaatttc atgatttgct agattgcaaa taaaagcact ttgagcttct tcatctttaa
    26221 aaagtgctgc agatgttcca taaaagggta ttttagaaac aaaatttgaa cttccatcta
    26281 agggatcaag aatgatttta taaggactat tttctccgat caagccactt tcttcggaaa
    26341 aaatttgacc taggttgcaa aggtgctcta taaagatttt ttcacatttt agatcaagct
    26401 tatagctttg attattatca aagccaagtt cgggacaaaa gctaagatcg ctttcgcaaa
    26461 tattgttaag atactcgcta atttgcaaat ttgcttttag gcaagcatct agaaattgtt
    26521 tcattaaaag cgtgttccta ggttaaattc aaaagtattg gtatcatcac cttttttatc
    26581 gttgagtggt ttagcaaata caagttgcaa tggcccaata ggagtgatcc attctatacc
    26641 taaacctgta ctcattcttt gaatttcatc aagattttta tttcctatca tcccataatc
    26701 aaaaaataca ctaccgcgaa gtttaattct atcgattaaa ggaaagctaa gctctacaga
    26761 atttgcaaaa gctatagttc cacccacttc atctccccat tcatttttag ggcttacagt
    26821 tctactttca aaacctcgaa gggagcgaat accacctaaa tagattcttt gattgattgg
    26881 aagatagccc tcatcccaaa ctttataaaa acttgcttta taacgataaa taagatcata
    26941 acctatataa tcttgcaaac cttgataaaa gttaaatttt gaactcgatg aaaggaattc
    27001 ttgatctcct ccaagtcctg catattctaa gcttgttgaa gcgataatac cttttcttgg
    27061 cagataataa tcatcggtgt tgttaaaggt gatagcagga gtgatagagc tttttatagt
    27121 tttgccaagc tcataacctg ttcttaaaag cgttgggctt agatgataga tatcgctttg
    27181 ctcaagattg taagttagac ttacattata atatcttgca aattgacgac ctagggtgat
    27241 atcaaaaccg taattttttt cagagtaatt atcccattca taatcattag aataaagcgt
    27301 tccgcccaag ctgtattgac tatcaagaat gcgtggattt ataagactga ttctccctga
    27361 tagggtatca tcacttttat ctacactcac agaactttta atacctgaac caaaaatatt
    27421 ggtatctgat aatgaagcat tgagtaacaa accatcgctt gaaccataac caatgcctcc
    27481 tgaaatagca cccgtagaag cttctttaac attgacgatt aaatctatat gtgtatcatc
    27541 tactttttct tctttaattt ctacatcatc aaaataagaa gttcttctta aagcatttgt
    27601 agattcactt aaatcggtgc gattgtataa atttccttcg gtgatataaa gttcgcgacg
    27661 tactactcta tcgaccgtgc gagaatttcc agaaatgata acatttctta tatagacttt
    27721 atcgtgagga atgaccttaa atacaacgct agcttcttgg gtttgatcat ttttttgaat
    27781 atcaggataa acctctgcaa aagcatagcc taaatcagca ctttgtgttt ctatggtttt
    27841 tacatctttg cgaatgtctt ctatattgat aagtttgcct tgggttgagc gtaggttttt
    27901 tacattttgt atattttctt cctcgctaaa taaaggattt tctatactta tactctcaat
    27961 tttataaggc ttgccttctt tgataaaata agtcagattg gcctgataag tatcggtata
    28021 ggttttaaga taaggcgagg atacttgtac atcaagatat ccttttttca tgtactcatc
    28081 gctgattctt gcgctatcat tgcttaattc aaaaattttg agctttccat catttcttcc
    28141 ccacatccag cccataaatt ctttttcttt attgactata ctaggctcga tatctgaata
    28201 tgaaaattcc tttgctccac ttaaattaac attgttaata acgatatttt ctccgcgatt
    28261 gactataaat tcaagctcta gtccttcggt attttctaga gtcttttttc tgtattctac
    28321 tatggtatca aaatagcttt tagcctcata ataagctttg atgcgttcgc ttgcttcttt
    28381 agcgcttgct tcatcaaata aagttcctct ttttataccc aaaatgctct ctacttgttt
    28441 tctatcatta gatgcaattc ctgtaatgct tattttagct atgcttggtt tttctgtgac
    28501 aatgatattt aaaataccat tattttcctc tacggcaata ttttcgaaat aattttgttt
    28561 ataaaggtta agtatggcgg tattgatttt atcaagattt attgtttcgc cgatttttaa
    28621 tcctgtaaga tttaaagcac ttgcatttga aagatgattt aatccgttaa atttaatttc
    28681 tttaattact gctgcattgc ttagtgcaac taaggcacaa atgctgatga tttttttcat
    28741 ttatttttac ctaaagcttt attaaaaatt tgtataatag cagaaaaaat ttaacaaaga
    28801 gattgagata atattatgaa agtagcaatt atagggcttg gattgatagg gggttcttta
    28861 ggactttgtt taaaggaaaa taaattaatt tcttgtgtgt atggtttaga ttcaagcaag
    28921 gaaaatgagc aagatgcttt aaatttagga cttgttcatg agcttataga atttgaaaat
    28981 ttgcatttgt gcgatatgat ttttatcgca acgcctgtaa atgctatcat agagatttta
    29041 caaaaattag taaatttgcc ttcaaataca accattatag agcttggaag tacaaaaaga
    29101 aaaatcatag aaaaattgcc tgcaaagctt accaaacaaa ctctttttgc ccatcctatg
    29161 gcaggaactg aaaacagcgg cccaaaagcg gcttttaaag agctttataa ggatgctgtt
    29221 tgtgtgttgt gtgatagtga agtggctgat gatttgcacc aaaaaagagc agtagaaatt
    29281 ttttcgcatt tgggtatgag gattgttttt atggatagca cagctcatga tcatcatgcc
    29341 gctattattt cgcatttgcc gcatgtgatt agtttttctt tagcaaattt tgtgatgaaa
    29401 gaagaagata aaagaaatat cgttcattta gcgggtggtt cttttaaggg tatgagtagg
    29461 attgctaaat catctcctat tatgtggggg agtatttttg aacaaaacaa agataatgtt
    29521 ttaagttcta ttgaattttt tcaaaaagaa ttagaatttt gcaaaaagat gattgaagag
    29581 gataaaaatg aagaattaaa gtcttggat
//
LOCUS       DBBXOW010000011        28967 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.011, whole genome shotgun sequence.
ACCESSION   DBBXOW010000011 DBBXOW010000000
VERSION     DBBXOW010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28967
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.011"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..349
                     /locus_tag="ACJE1S_000505"
     CDS             <1..349
                     /locus_tag="ACJE1S_000505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806075.1"
                     /translation="KYIKEAPIWAKSYTSPNCEVFMKKNFFLLALLLGFFITSAFAGN
                     TDSIGAKGLWDIVSGWLNDTYVSRIIALLLFCVGVWRAFAGSILQFFLMLGFAVLVTQ
                     GSTIIETINSATF"
     gene            431..736
                     /locus_tag="ACJE1S_000506"
     CDS             431..736
                     /locus_tag="ACJE1S_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HGG0806076.1"
                     /translation="MAKTENGYVEINKFIDTKPMFGNWEVDTLAIFCIFIATAIMFAK
                     GLVAYGIIITFGVVAAKYYEKLKKSRVKGFFFHIIYMLGLRQPKTLPPSYMRYFLGA"
     gene            740..1318
                     /locus_tag="ACJE1S_000507"
     CDS             740..1318
                     /locus_tag="ACJE1S_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraE/TraK family type IV conjugative transfer
                     system protein"
                     /protein_id="HGG0806077.1"
                     /translation="MLFDKYKNQMDKYIFENITFRIVTLILSFVILVLIWVILARTDS
                     QKVVFMPPKIVNQEFWIAGNQVSKGYLHEMGQFISFNLLNITKENARNNIDNLLTLVD
                     PKFYQEVKTKLLEQMNYIIDNAISRTFFVSAIDADTKGQIKVFGVVKDIISDKVVRSS
                     QSVLKINYIIEQGRFILNDLSIEEEKNNKEKN"
     gene            1315..2127
                     /locus_tag="ACJE1S_000508"
     CDS             1315..2127
                     /locus_tag="ACJE1S_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HGG0806078.1"
                     /translation="MKKVILSALTLSTSLFAINVIDNPSSDIININVSNSSVNRIVLP
                     TQILDVAYSKEKGIDIKISGNQAFIKFLPIQKEQVRSVGKDRYEPVGEPEIVYDKAKG
                     SEVFFVTANRTYSFALNPKNMDAETVIINDFSAQKDEILKYESDDPYMSTMAKITESI
                     LKGGVPQGYKIKKINKVASSDKTLTTRELTNYDGLLYKATLLEVENKTDKAIRLNPKD
                     YISIAKEAPKAISIYYNNEVNHLLPYSKAQIIIITKGGRNTNGGVFDGGMSK"
     gene            2124..3464
                     /locus_tag="ACJE1S_000509"
     CDS             2124..3464
                     /locus_tag="ACJE1S_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HGG0806079.1"
                     /translation="MKNPFIKFFSNDKSPIDAQKTQNKNKVLIFTGIFVIAGALLFLV
                     GGGDKKESKEKVGNFNLVQDDPMAKTRWVGEASDDLTLAKKRVDNLDTRNKELSKQVS
                     DLKKIITDMKKENDANKRNYELNLKNIQEAQKKATENTPATVLEDTPNNKEEDLYKNF
                     PQPNKNAANTQKPSDYGLTHFGDVPELNEVTQTRYTPIQDSLSFTNIAKPEEKEKVEK
                     KSTRHVIPTGSIVKAVLLSGMDAPTMTQAKTEPLPVLMKVTDLSILPNRWGYDINECF
                     LMGEGYGDLTSERAYIRVNNISCVTNKGQKIDMAMKGAATGEDGKLGLRGEVVTKQGA
                     LLARTLIAGFLQGVGEGFANQNQIVTQNGFGGTTTTNSDMSASATLQAGAFKGLSKSA
                     EKLADFYLKMADQVSPVIEIAAGREINIITTATLELKTLEEQQQDSAKKNNNKK"
     gene            3477..4241
                     /locus_tag="ACJE1S_000510"
     CDS             3477..4241
                     /locus_tag="ACJE1S_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HGG0806080.1"
                     /translation="MKIFSKIILGSLALASLLHAQTLIEQQEESLVKGVIPSTKIAKV
                     ERSQIDGFYKAYLDNGNILYVNPFKRVIFIGELYTNTGVSLTANDRDAWQSEVSAKQA
                     KDLNLKEVTQYAKKVDFGKGSKKYEFVLFTDPECPFCARVEELFIKKDVSVYVNFFPL
                     SIHPHAEQWSKEILSAPDFKEALIKLRETQKDLEVKITPQAEQTLKNMRELGEKLNIM
                     GTPKLLVVDKKEKKIIDVIDGANMQKINSYLDKDKQ"
     gene            4238..5239
                     /locus_tag="ACJE1S_000511"
     CDS             4238..5239
                     /locus_tag="ACJE1S_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HGG0806081.1"
                     /translation="MIKNGVITLSLAASIFLGACSMLPYKENFSCEKGKDNGMCGSVI
                     EVYDLSSDMDELRKKTDREYEQKHPEVKAEAKTKAEQEARDSFRTLKLQEMVESVEIR
                     KIQNETPTIFRYYLSEEEASNKADVALISENDKESKAIRKDLKNQTEKANSQTNKNTK
                     NGKNTHLKHSNKSASKNDSKIKNNANKETNINKLYDGIKIYDNNESGIKDANLTNKEG
                     NASSVNTLDINFTKSNAEQNLSTANTNTNGIDKNSQVTNEPAIDCSVSSDSKITQING
                     KVKVCVYHANIREMPSCKALVLRVANQGEELEALYEQGGWIKLKDGTYVHKSIVTKD"
     gene            5208..5711
                     /locus_tag="ACJE1S_000512"
     CDS             5208..5711
                     /locus_tag="ACJE1S_000512"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HGG0806082.1"
                     /translation="MYIKASLQKISLVSLALAFSLTNLSAKEAQTSEYDNNLLLKKAV
                     LKLYRENQELEKRVAVLEEKLGIPKPEQNASVINPKPLDQNAFVFLSRVKDEFKKGRK
                     IVLGQAIKDAKYYSKPSISSRVVGNVAKGKRIIIKGVTEQNGNAWYKIEDWMYIDASA
                     VSFRSKK"
     gene            5708..6154
                     /locus_tag="ACJE1S_000513"
     CDS             5708..6154
                     /locus_tag="ACJE1S_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806083.1"
                     /translation="MNKKSILILCATLLFTACASKQQITKEPSVDAQLKLLVDGGMKY
                     TDLDKQDEDELIRGLLKNSPSFAQSNQQSAVKENMVKLPNNMPLFRQPLFAQMVVFPY
                     VSDDGIYHGYSESWLKIKEGEFVLSDPRSKQDPSERIFDMNDVGTK"
     gene            6151..8679
                     /locus_tag="ACJE1S_000514"
     CDS             6151..8679
                     /locus_tag="ACJE1S_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HGG0806084.1"
                     /translation="MSLSDFINEKLGINQSVKKITSLQTNVWNACMQRYKFSDFLPYM
                     SYDSQKEYYINNDNSFGTVFLCSPRIRMGESTAVAVEEMLGKLPENMFIQFTLFGSKN
                     IKDIVEYWKYMHLERADRENNELLFKAIKNMEEFYYSKTKEGISSSMTTRLKNYYLLV
                     SIKSNSEEDVISYKHILKNILTSNNFSPVVAEPEVLKPMLYELFNGNHDINNIPNYDR
                     TCYLNRQVIMPTTEILIKDDELKIDGRSFISLTPQSFPQEAHIGDFGEKLGDYISRAL
                     DNNQFKDTFLITASVCALSKKKTARVKDNHSMLLTQKWSENIFRQFAAARKESVSILE
                     RIDNQKEKLYAFDLNVIVSGDNYNEASLNASTIISYWNKGGSKAIVLDEALGIHQLNL
                     IASLPMGINKEYMFDITVKYRSMFPDQISQFIPLEADFKLNIPNLILFSRRAQIAGLD
                     LFVSSSNYNAYLVATSGAGKSVLLNMLAFNSYARNDRIFIIDQDNSFINICDAVGGQY
                     LALDPSKPISFNPFSGLKNNDRDSFAEDLEYLSRLIYMLGSSKNQDRALEDERLIKAK
                     TQAIMEELFLSKGNTMEVTDIRDELAKVDDQRFRDFADQLRPFCKEGIYGKYFNGPCE
                     FNIEKEFIVTEFKGLEGYDDLKDPLIMLLIYHINQLMYMSTDRKSRIQIIIDEAHRFL
                     GKNPKMDDFIEQAYRRARKYGASAIIATQGFDDIYNAKDGGLSRAGTVIVNNSAYKIF
                     MKQTETSVNMLIKSEVFSLSETDKEILRSIRTIKGEYSELFLMTPDDVKLPYRLVVDK
                     YFYYLTTTDATDKAKIKELTDQGIPLGEAIDLLANTKTKSNEAK"
     gene            8633..9169
                     /locus_tag="ACJE1S_000515"
     CDS             8633..9169
                     /locus_tag="ACJE1S_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HGG0806085.1"
                     /translation="MIYLPILRQKAMKLSKNQIRTLINKALFVLIAFIIGNIVVSALS
                     QFYGIGVIHTKSIDKDVFIYQKKFQGDLKDSLIYFSLPVQTRYFNKDSNFGKYVRCEE
                     GQTLSVKDLKYYCDNVFLGIAQKTDKDGNKVEQFIFNGVIPKDKFFVMGTHPRSFDSR
                     YWGFVDRKDIKGVSIWAF"
     gene            9157..10623
                     /locus_tag="ACJE1S_000516"
     CDS             9157..10623
                     /locus_tag="ACJE1S_000516"
                     /inference="COORDINATES: protein motif:HMM:NF017892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HGG0806086.1"
                     /translation="MGILKKRVIISAIACAFLLPSALNANLSSFIQNNLGSSITSENS
                     GYYKSQVSGFISGGSSRIRWGGGETIRPYSVTAPSFNVGCSGIDMIFGGFSYLNFEYL
                     VEKLKKIASAAPAYAFQMALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNK
                     FGKMLSSNTESGQNDSWLTSFAKGMEGTAQTVQNFAKEANAFVNGTTPDKSGETNAAK
                     ILKQGSIIQKIIEKGKASFFADAFGENQYEDILRGVFGDLVAYTEKSTSITNKKMSDP
                     EKVMLIGPTLNTDKFIEALWNKNGENKSITLEFTAYTINKDENGLYQEPVGKETKVTI
                     DKDIRSLLIEKFKAIVAKIKAKTSLDDADKNLINAAPLPVADILNIEASTGLNGDAVY
                     EFVALLMVDAFVNELFNEFITNINTVQGLDPKFSSDHKDDLAKFNAAVAKVQETTRAL
                     LSENAQAIIRDNQQVDSIRKIISNFYGVSDIFNYGTGR"
     gene            10632..11822
                     /locus_tag="ACJE1S_000517"
     CDS             10632..11822
                     /locus_tag="ACJE1S_000517"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806087.1"
                     /translation="MRKYLFLALATCSFLQAANDAAAEGNSFGSQLNNYFKSNADTAI
                     NSLTNGGEIRTVDGKQKANVQMACDESKSGEFLNIDYTGTSDINIKIKFDKNVDGKVD
                     KIWSFDNVSGICTNGVVKCDKNSWNNCEYFQYNYGDNINLVKTTIDNLNGCYCINSSC
                     GSAAAKNRDKILSDIAGPIYSALSAKTQLVLSKTTKVGSALSYRGQDYSVCDNYGQAV
                     NIDSSSNLEGLGQELAASQSNNENSVYSVFHKGTDNTVPKDENFNNKVSNSSVSIDQS
                     AKYSKGSSKIDFSYIDTTSGKNVAGDMQATPDVDAKFCEVNVAKEDTSAFNDGTNREN
                     STNNTTVYQSEIRECTNNWTKCPVNGKNETLKHDCGKINDMGEALAQLSALDEASKDM
                     VCSK"
     gene            11810..12166
                     /locus_tag="ACJE1S_000518"
     CDS             11810..12166
                     /locus_tag="ACJE1S_000518"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806088.1"
                     /translation="MFKIKTTPKVVSLWSRALQKAVSYFLDLKNIFLISSLKSVINTA
                     VTAMNVFRKSIVDSFLGVISSRIPNLIAKKKARPFLRIELLSHLQGSVKPLLSIYLMD
                     KNIITQNSKKGNDENI"
     gene            12153..12488
                     /locus_tag="ACJE1S_000519"
     CDS             12153..12488
                     /locus_tag="ACJE1S_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806089.1"
                     /translation="MKTFNCNIEINKNKTKQPKFSFNDKGLFDSQKYDITDVGNLIFA
                     SSINKIFGFTTKSFKEMIIKCNTNNLLKNESAFESIELKKEEEKFTLDFLIESNKTSV
                     LSVFKGKII"
     gene            12485..14650
                     /gene="traN"
                     /locus_tag="ACJE1S_000520"
     CDS             12485..14650
                     /gene="traN"
                     /locus_tag="ACJE1S_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HGG0806090.1"
                     /translation="MKNYNLLRFFSKNTSVEQITPKTLRLAILLSASLSFSQAAIQCT
                     DYNDFKQFNGHYYTATVQKMTFEDARKLAEDSGGYLAIPDSKAENDFLSSLFRGGQYA
                     WIGVYDPSYISNYCVEGNSGCIYDDSRFKTVKGNPLTYKNWAQTQPDNLLKKYDIVDG
                     KERVSPLGEHWVAMASPSGQWSDQGNHFGDTNNPVRNYALLEFDKIPDCAGGGSDGGD
                     NGHTATDAMQCNTNFSDDPNFKPANGQGQSIACLQNSQQKYFCPAQLTQCVNSDDAVD
                     GSSKKIEGGVLKTGKTKVRLTFSKSIGYNAWQVVTNDIYITDIDAIDSFKLVYAGADD
                     WVVPFAPNSTVAVVGNKPNNTKDALDYIPYRPNNDNYGELSKFSGKNLNIELKQYLHT
                     GINKSVAFFATVGSGGWQLTYEATGKDISCSNFGRNLNCTEESETIPFSAYKYTCPAG
                     YQPKEQGGVCSPQSVDDLIDTNGDGIGDSCNSSIAPAKNCLGVTRTCPFNSSRECVLI
                     DNKYQCSPFPCFKGVSDVENTDTPVGVNDANNNGWNDDGTCSGQIIIFNGQDNRCKNW
                     DMFGGLLGGGCCDKDNVFLGLVACKEDEKKLAKLNDAGKCHEVGTYCSKKVSLGFTKI
                     CVEKKKSFCCFNSKLGRIFNEQGRPQLGKGWGSAEGPQCKGFTPEEFQKLDFSEIDLS
                     EFIADIVGSFDTGKIQADSVKIQEKIQNNIENATKKPTN"
     gene            15278..17986
                     /locus_tag="ACJE1S_000521"
     CDS             15278..17986
                     /locus_tag="ACJE1S_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HGG0806091.1"
                     /translation="MKRFYFLFFSTLFFAPSFLFGATNIANSNLIYTWGYGDVMNEIM
                     QAVKGITTETDYIVNAALAISLLLFSIKKAMDGQTNPVFEFGKMFMLFAVVWYMFLRA
                     PNDNNHRFMIHDEVTSKDYVISQIPIGIGKSFALMTQFEKVILEAMEKHFTTPQSTNF
                     SNAGLGFSLQVMSTLPNVKLSAIDATLQKNIDFYFRNCVSVGILLNQQGRNLFQNSDN
                     LIQDLFTNIGNGSQLTPLFENNNNIEKQSVVPCSDAGPQIVEMIKNDTDEAMKIHAAL
                     LGMANDMANYEQKFLGAAQIYNEQAVSARSYLQQSMIMLASQDAIINTAKSVGLNPAS
                     VAANTAYADQQFYASMQAQGHMAQTYLPLAKAYLTAIIIGLSWLVALLSIVFGSYAHI
                     KMFFTLCIWIVLWTPILCIINFINDFNLMNVAQVITGGKAALSLGDNILIFKEVASRS
                     NFMNYLVMSTPVLAYAIAKASEQGFVTFASGLSQALTGASRAAGSFANQQALSTQTSI
                     AAPRGDEVWAVGAGYNTLQSSFGAGGRSFMGTRDMQHGGELVKDNMTGSSAVINADGS
                     IGNASIKGLNAGITASNLETRAHALSDAIQNSNLSQRALEVASGKGDSLALSENDRSA
                     ITNATQHALANAYSKATGVDVKQAYDDVMKGNIGFGVGGVSTSSMETEAWYQNLSKNQ
                     QETFDKTFNESISNEIGKNRDASASFSNLLKTGNVTNSASIKSSMDSYNEAKTLNNSV
                     GYDGGASIVQGYINENYGGVVNKENVASAMNAVENMAARGDMQGLSHYTGVDSNVNSN
                     GLFGQSKHNYHDPRGVMTDHNKAIDDLNSRQKGFMATRNAPNDVKSEGLAGGIQKAAN
                     VAEYKAGTAIEERNNKIDYAGIQKDIKDGKADINKAIDFGNQNRNM"
     gene            complement(18013..18276)
                     /locus_tag="ACJE1S_000522"
     CDS             complement(18013..18276)
                     /locus_tag="ACJE1S_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806092.1"
                     /translation="MDKAHLITYLVSLAFIVSGLIVCCILYLFKDKINKITPENIDNI
                     NSNVKDFIEKNIGILNSNESTTDYITDPTYSHMPGNIYYNNQD"
     gene            complement(18288..18563)
                     /locus_tag="ACJE1S_000523"
     CDS             complement(18288..18563)
                     /locus_tag="ACJE1S_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002817426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HGG0806093.1"
                     /translation="MRKINLLRSFKKDYEKVKKQSWDLNTIDDVIQCLMNLDVLPTRL
                     KDHALKGEFKDFRECHIFGDLVIIYKRDDKILSLYRIGRHQDLFKKY"
     gene            complement(18564..18758)
                     /locus_tag="ACJE1S_000524"
     CDS             complement(18564..18758)
                     /locus_tag="ACJE1S_000524"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806094.1"
                     /translation="MTLTINNADEKLLKAVQSIVSLSPKATLEIEQEIPSGETIEALN
                     NPVSCGVFENYEDFKKALQD"
     gene            complement(19296..19577)
                     /locus_tag="ACJE1S_000525"
     CDS             complement(19296..19577)
                     /locus_tag="ACJE1S_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HGG0806095.1"
                     /translation="MKIVESDKFKKELNNILAFIAKDSVSAKNYFSKSLKDAILCIDN
                     MPYKFRKSTLFNDENIRDFIFKKYVIPYYIDSKNDKILLITIYKNNLVK"
     gene            complement(19578..19811)
                     /locus_tag="ACJE1S_000526"
     CDS             complement(19578..19811)
                     /locus_tag="ACJE1S_000526"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806096.1"
                     /translation="MHTITITSDNIDFIKSLECLSKNAGAIFKISKNDLEATLDNYED
                     NRTLDEVKKEAEETLLHYKQGKLSVTPLGSEWL"
     gene            complement(19946..20305)
                     /locus_tag="ACJE1S_000527"
     CDS             complement(19946..20305)
                     /locus_tag="ACJE1S_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HGG0806097.1"
                     /translation="MKDLDYYLNLPYEIIIKKLDEKDGGGYFARYKDFPYIMGDGENE
                     IEALKDLKEAFKGALEVMLEKGDYIKEPIDNEAKIRINITLPKSLVEAIDTISDNRSK
                     FLADLANSAIKSYKIST"
     gene            complement(20309..20536)
                     /locus_tag="ACJE1S_000528"
     CDS             complement(20309..20536)
                     /locus_tag="ACJE1S_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HGG0806098.1"
                     /translation="MSKKDKIIKDLKNNPNNVRFETLKILLESEGYECFNKGGSHYQF
                     RKKECDLITIPFKRPIKAIYVKMVLKAITGE"
     gene            complement(20982..21155)
                     /locus_tag="ACJE1S_000529"
     CDS             complement(20982..21155)
                     /locus_tag="ACJE1S_000529"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG0806099.1"
                     /translation="MVYVNYTKYITIFIPFVGSGSEIISAIRNNRKAFGCEINKEYCN
                     FAKDRVNMLLKRA"
     gene            complement(21754..22761)
                     /locus_tag="ACJE1S_000530"
     CDS             complement(21754..22761)
                     /locus_tag="ACJE1S_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3825 domain-containing protein"
                     /protein_id="HGG0806100.1"
                     /translation="MEKNIEKLILEAYEDSKTKFDHVTTGHISQYLKRKYDLKINCSK
                     ALIEAGFDLEKDENEPSLVYVKKATTRNKTSNRDQIQNKVEEKPLLFQFAYFPNFLNT
                     LQELSNITQKEFWGNGNNILFSYLFKYFEFIYENKSYPDIITYNKDKTKACFNTGLYS
                     TGVFPIFAYFEKQENGGYIFRKFCSNGDRVLDDLEIPKSLSDYDTFKNEIIFDSKLDF
                     RVNHLHLFERKERLPEIVKKLNDRFIGHIINGELKIIKDNYNLQKMIIPAAYKQRVVL
                     YIPLKLQEESVDTIVVVEKEEVKNEQYYAVRTILNPHDNIYKTARVLSIVESEWVKNT
                     I"
     gene            complement(22763..23191)
                     /locus_tag="ACJE1S_000531"
     CDS             complement(22763..23191)
                     /locus_tag="ACJE1S_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HGG0806101.1"
                     /translation="MIKKIRILFLAIFLAFSPMVLEAKIYDDVYVAQKQALKEAKLMI
                     FFVVSNTCEYCHKLMNDVLNNRDLMEYLNKNFIVAISDLNTNGLIPKDLLFNGVTPTT
                     YILTPTGKVIGTPIEGAVDSDILFGLLKGLEDYKKGQLGF"
     gene            complement(23204..23986)
                     /gene="traT"
                     /locus_tag="ACJE1S_000532"
     CDS             complement(23204..23986)
                     /gene="traT"
                     /locus_tag="ACJE1S_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="complement resistance protein TraT"
                     /protein_id="HGG0806102.1"
                     /translation="MKINKTIFKTGMCSVLAASLLTGCLTTTLQTNATMSQSIFLDPV
                     AKEKRIVFLNIKNTSGHDVNLEPKLRSALEAKGYKVIDDPDKANYILSTNILYCDKKQ
                     ENNAVGGAVAGGATGVAVSGYNGGGAGGMVAAGAAGALVGGLLGKLTEDTIWQMQVDI
                     NIKQKADGKVLTSSGNVSGQASVRDSQSSGFLNSFGGNVRSDKVGHLNSNQINNTQQT
                     YEGKYIEKNTIIFAEAVKTGLKLPEATPILEDKIANQIAGLF"
     gene            complement(23973..24821)
                     /locus_tag="ACJE1S_000533"
     CDS             complement(23973..24821)
                     /locus_tag="ACJE1S_000533"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806103.1"
                     /translation="MNCFKKLKEKIILIKIEKEKASEEKFLKECEIKEAEIRMEILEK
                     RKDDLFNQREELIHSILDEASFNALTEERYLELIKNYHILTEDNKANLYGILRRAYNL
                     NSMVRDLKCLDKSINELEEEEDKQVEILKRKKTNSHIKKEEKMEKNAVEILNNIKTDE
                     FSNTINIIKVIEIENILEFKDLVDIFVNDKYKIEAKALKYLEVVLNKTEFFRTYLESK
                     ISKEFSEYHAKEQEKDYFGKFLKTLEKGLDNLTGETEEDRAKFKKHVKEIFEKIFNKK
                     ENNENK"
     gene            complement(24831..25775)
                     /locus_tag="ACJE1S_000534"
     CDS             complement(24831..25775)
                     /locus_tag="ACJE1S_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC family F-type conjugative pilus assembly
                     protein"
                     /protein_id="HGG0806104.1"
                     /translation="MKKQIIGSILLCSSLFAIDDNLTKEQIFHNKYLKDKAAMQNKIS
                     VDELYKNTKDFNLSSMRQDMNLTKDEIKKRYDIKFNQSAEANKSAKIVSDMRRSDAFE
                     KKIVDNQNYILYDKSMNFNEYLGEYSQNTKDMINQMENSKHLISTNKYLNPNEKIFIV
                     ISSSMDKSSIQNYFKLLENVKTDITFVLRGLVGNDARYINPTFSYLQDLLVKDPNNKN
                     KEDKNNFYYYNIEINPKVTRRFNITKVPAVIFIKNYDPIVEDYQKMTNTPADTNEEYF
                     VAYGETSINYALSEINKQAKSDGLARFIQNMNSNFYTK"
     gene            complement(25791..26453)
                     /locus_tag="ACJE1S_000535"
     CDS             complement(25791..26453)
                     /locus_tag="ACJE1S_000535"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG0806105.1"
                     /translation="MFIKELRERLNLTQSEFAKNLNINQAIVSRYENKKLRPTSEFII
                     RLIKTFNANPNFIFFGKEPCLNENTYKNEISQELNQLIDELSLYENEKNIISELENSA
                     LEKIISLVSDKEIWEKLFSLLFKIDRKLYTITLFICRVSKRLEEKSEAHKAYLASIIN
                     SFDDKDFSKLNECMKMDLITLFNEKFTEEEANIIIEDCLVVFKHIEKTAPIHKMIELG
                     KN"
     gene            complement(26476..27474)
                     /locus_tag="ACJE1S_000536"
     CDS             complement(26476..27474)
                     /locus_tag="ACJE1S_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraU family protein"
                     /protein_id="HGG0806106.1"
                     /translation="MKFKAHLISAVAAACLFFHPSETKAVCAPNPSQILISLTELCWE
                     CIFPISIAGIQVIQGPMPDPQGSVGSPICICPAPPPLFFRIGIPIGYFEPSRMLDSVK
                     DPYCFVGLGFGMPEMLTASKGTKGDGHDRARVFYQSHYYIYPIIGMVGILIDAACMNI
                     TSGVDIAYMTEVDPLWQDDELTALINPEALLFGNPISNLACMADSVSAQANVALDPLF
                     WCKGSWGNAYPLSGNTGSKDYVEDAASVAGSMIYKLHRELILWESAGQLGLCGEYPMP
                     IWRKSSYRLQILAPVPHPMGMGIGQSGILWSFAKNYPVAGDNFTFMVFKKKECCAF"
     gene            complement(27491..28165)
                     /locus_tag="ACJE1S_000537"
     CDS             complement(27491..28165)
                     /locus_tag="ACJE1S_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein ParM"
                     /protein_id="HGG0806107.1"
                     /translation="MKKIFFSTIILASVLYAGGSKEMVLGKTKDFAERDMIELIQEFI
                     EKNKAQIEQKAFKTREQARENVKNYQPKGLIPLKPALEDKIFYPDLTYTLDQDIKNAN
                     GDILYPKGFKFNPADYVKLSYAMVVINGNNKKEVEWFKKSGFSNQVSYRLLLSEGSYY
                     DLNQELKQEVFYLNPQIREKFKIEKTPSIIKQIDNKIQIHEICIPCMENNKTKIVDNN
                     LSIKEI"
     gene            complement(28178..28948)
                     /gene="traF"
                     /locus_tag="ACJE1S_000538"
     CDS             complement(28178..28948)
                     /gene="traF"
                     /locus_tag="ACJE1S_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HGG0806108.1"
                     /translation="MKISTTILVLACFLQASTFFGDSKRGWFYYELADNNNTQEKNET
                     KIQKRMNADDLFIASIPLNNLDLLTAEEFTETFEKVRKIAIMNPTKTNVMTMQIMNKW
                     QVDQSEKFAKVWALNLLENPNLEYPEIRDDKFGRSEMFRQKQEKINNFYKAHQDDFSY
                     VVFVSDLNKEINEKQKGIYRSLQSDYGVNVEYVNVDERKDLISKFKLATTPENFFVYR
                     NSKGEAIWQRVKSGLTNKDDIINNTLFLFDNAILEKDK"
BASE COUNT        10021 a         4181 c         4661 g        10104 t
ORIGIN      
        1 taagtatata aaagaagctc caatctgggc taagagctac acaagtccaa attgtgaggt
       61 ttttatgaaa aagaattttt ttctcctagc tttacttcta gggtttttca ttacaagtgc
      121 ttttgcagga aatactgata gtattggtgc aaaagggctt tgggatattg taagtggttg
      181 gttaaatgat acttatgttt caagaattat agccttgcta cttttttgtg ttggcgtttg
      241 gagagctttt gcaggttcaa ttttgcaatt tttcttaatg ctaggttttg cagtacttgt
      301 tactcaggga agtacgatca ttgaaactat caattctgct acattttaat aaaaagggtg
      361 taaaaaccct tttttatttt tcttgagatt ttttaatgaa atttcaataa atataaaaaa
      421 ggagttaatt ttggcaaaaa ctgaaaatgg ttatgttgaa ataaataaat ttatagatac
      481 aaaacctatg tttggtaatt gggaagttga tactttagct atattttgta tatttatagc
      541 tactgcaatt atgtttgcta aaggtcttgt tgcctatgga ataattatta cttttggggt
      601 tgtagctgca aaatattatg agaagttaaa aaagtcaaga gtaaaaggtt ttttctttca
      661 tatcatttat atgctaggtt taagacaacc taaaactttg cctccttcgt atatgagata
      721 ttttttagga gcttagaaaa tgttatttga taaatataaa aatcagatgg ataaatatat
      781 atttgaaaat attaccttcc gtattgtaac gcttatttta tcctttgtta ttttagtgct
      841 tatttgggta attcttgcaa gaacagactc gcaaaaagtt gtatttatgc cgccaaaaat
      901 tgttaatcag gaattttgga ttgcgggaaa tcaggtttcg aaaggatatt tgcatgaaat
      961 gggacaattc atatctttta accttttaaa tattaccaaa gaaaatgcaa gaaataatat
     1021 agacaacttg cttacacttg tagatccaaa attttatcaa gaagtaaaaa caaaactttt
     1081 ggagcaaatg aattatatta ttgataacgc aattagtcgc actttctttg tttctgctat
     1141 tgatgcggat acaaaaggac aaattaaagt atttggagtg gttaaagata ttatatccga
     1201 taaggtggtt cgctcatctc aaagtgtttt gaaaattaat tatattatcg aacaaggaag
     1261 atttattctc aacgatcttt ctatagaaga agaaaagaat aacaaggaga aaaattgaaa
     1321 aaagtaatat tatcggcttt gactttaagc actagcttat ttgctattaa tgttattgat
     1381 aatccttcga gcgatattat caatattaat gtttcaaata gcagtgttaa tcgaattgta
     1441 ctacctactc aaattttaga tgtagcatac tctaaagaaa aaggtataga tattaagatc
     1501 tcaggaaatc aagctttcat taaattccta cctatccaaa aagaacaagt tagaagtgta
     1561 ggaaaagata gatatgagcc tgtgggtgaa cctgaaattg tttatgataa agcaaaaggt
     1621 tctgaagttt tttttgtgac tgcaaataga acctattctt ttgcattaaa tcctaaaaat
     1681 atggatgctg aaactgtaat tattaatgat tttagcgcac aaaaagatga aattttaaaa
     1741 tatgaaagtg atgatcctta tatgtccact atggcaaaaa taactgagag tattttaaaa
     1801 ggtggagttc cacaaggata taagattaaa aagattaata aagttgcttc aagcgacaaa
     1861 accttaacca caagagagct aactaattat gatggtctgc tttataaagc aactttactt
     1921 gaagttgaaa acaaaactga taaggcaata agactaaatc ctaaagatta tatttctatt
     1981 gcaaaagaag ctccaaaggc tataagtatt tattacaaca atgaagtaaa tcatttatta
     2041 ccttattcta aagcacaaat tataatcatt actaaaggcg gaagaaatac aaatggcggt
     2101 gtatttgatg gggggatgtc aaaatgaaaa atccttttat aaagtttttt agcaatgata
     2161 aaagtcctat cgatgcacag aaaactcaaa ataaaaacaa ggttttaatt tttacaggta
     2221 tttttgtgat tgcaggagct ttactttttt tagtaggcgg tggcgataaa aaagaatcta
     2281 aagaaaaagt aggcaatttt aatcttgttc aagatgatcc tatggctaaa acaaggtggg
     2341 taggtgaagc aagtgatgat cttactttag ctaaaaaaag agtagataat ttagatactc
     2401 gtaataaaga actttcaaag caagtcagtg atcttaaaaa aattatcact gatatgaaaa
     2461 aagaaaatga tgcaaataaa agaaattatg agttaaattt aaaaaatata caagaagcgc
     2521 agaagaaagc tacagaaaat actcctgcaa ctgttttaga agacactcca aataataaag
     2581 aagaagattt atataagaat tttcctcagc caaataaaaa tgcagcaaat acacaaaaac
     2641 caagtgatta tggcttaaca cattttggtg atgttcctga attaaatgag gttacacaaa
     2701 caagatatac accgattcaa gattctcttt cttttacaaa cattgctaaa cctgaagaaa
     2761 aggaaaaagt agaaaaaaag tcgactaggc atgtcattcc tacaggctcg attgtaaaag
     2821 ctgttttact ctcaggtatg gatgccccta cgatgactca agcaaaaact gagccattgc
     2881 ctgtactcat gaaagttact gatctttcta ttttaccaaa tcgatggggt tatgatatta
     2941 atgaatgttt tttaatgggc gaaggatatg gggatttaac aagcgaaaga gcatacatta
     3001 gagttaataa tatttcttgt gttactaata aaggacaaaa aattgacatg gcaatgaagg
     3061 gtgctgcaac cggtgaagat ggcaaattag gcttgcgtgg tgaggtagtt accaagcaag
     3121 gagctttact tgctaggact ttaattgcag gtttcttaca aggcgtagga gaaggttttg
     3181 ctaatcaaaa tcaaatcgta actcaaaacg gttttggtgg aactacaaca acaaatagtg
     3241 atatgagtgc gagcgctact ttgcaagcag gtgcatttaa agggctttca aaaagtgccg
     3301 aaaaacttgc agatttttat ctaaaaatgg cagatcaagt ttcccctgta attgagattg
     3361 cagcaggtag agaaattaac attatcacca cagctacttt ggagttaaaa accttagaag
     3421 aacaacaaca agatagcgca aagaaaaata acaataaaaa ataaggagaa aaatacatga
     3481 aaatcttttc taaaataatt ttaggctctt tagctttagc aagcttactt catgctcaaa
     3541 ctcttattga acaacaagaa gaatcattgg ttaaaggtgt tattccttca acaaaaatag
     3601 ctaaagtaga aagaagtcaa attgatggat tttataaggc ttatttggat aatggaaata
     3661 tcttatatgt taatcctttt aaaagggtaa tatttatcgg agagctgtat acaaatacag
     3721 gtgtaagttt aacagccaat gatagagatg cttggcaaag cgaagttagc gctaaacaag
     3781 ctaaagactt aaatttaaaa gaagtcacac aatacgctaa aaaagtagat tttggaaagg
     3841 gttctaaaaa gtatgagttt gttcttttta ccgatcctga atgtccgttt tgcgcaagag
     3901 tagaagagct ttttatcaaa aaagatgtca gtgtttatgt aaatttcttt cctttaagta
     3961 ttcatcctca tgctgaacaa tggagtaaag aaattttatc tgcgcctgat ttcaaagaag
     4021 ctctaattaa acttagagaa actcaaaaag atttagaagt aaaaattact ccacaggctg
     4081 agcaaactct taaaaatatg agagaattag gtgaaaagct aaatattatg ggtactccaa
     4141 aacttttagt agtggataaa aaagagaaaa aaatcattga tgtaattgat ggagcaaata
     4201 tgcaaaaaat caattcttat ttagataagg ataagcaatg attaaaaacg gtgtaattac
     4261 attatcttta gctgcctcta tctttttagg agcttgctct atgttgcctt ataaagaaaa
     4321 cttttcttgt gaaaaaggaa aagataacgg aatgtgtggc tcggtgattg aagtgtatga
     4381 tcttagttct gatatggatg agcttagaaa aaaaacagat agagaatatg agcaaaaaca
     4441 tcctgaggta aaagctgaag caaaaactaa agctgaacaa gaagcaagag atagttttag
     4501 aaccttaaaa cttcaagaaa tggttgaatc tgtagaaatt cgtaaaattc aaaatgaaac
     4561 gcctactatt tttagatatt acttaagcga agaagaggca agcaataaag ctgatgtcgc
     4621 tttaatcagt gaaaatgata aagaaagcaa ggcaattcga aaagatttga aaaatcaaac
     4681 tgaaaaagca aattcgcaaa caaataagaa tacaaaaaat ggtaaaaata ctcatttaaa
     4741 acattctaat aagtctgcat ctaaaaatga tagcaagata aaaaataatg ccaataaaga
     4801 aaccaatatt aataaacttt atgatggcat taaaatctat gacaataacg aaagcggaat
     4861 aaaagatgca aatcttacaa ataaagaagg taatgcaagc tcagtcaata ctttagatat
     4921 aaattttacg aaatctaatg ctgaacaaaa tctttcaact gcaaatacaa atacaaatgg
     4981 tattgataaa aattcacaag ttactaatga gcctgctata gattgttctg taagttcgga
     5041 ttcaaaaatc actcaaatta atggcaaggt taaagtttgt gtttatcacg caaatattag
     5101 agaaatgcct tcttgcaaag ctcttgtttt aagggtggct aaccaaggcg aagaattaga
     5161 agctttgtat gagcaaggcg gatggattaa attaaaggat ggaacttatg tacataaaag
     5221 catcgttaca aaagattagt ttagtaagtt tagctttggc tttttcttta acaaacctaa
     5281 gtgctaaaga agctcaaaca agcgaatatg ataataactt gttattgaaa aaagctgttt
     5341 taaaacttta tagagaaaat caagaacttg aaaaaagagt agcagtttta gaggaaaaat
     5401 taggcattcc aaaacctgaa caaaacgctt cggttataaa tcctaaacct ttagatcaaa
     5461 acgcttttgt atttttatca agggtaaaag atgagtttaa aaaaggtaga aaaatagttt
     5521 taggacaagc cattaaagat gcaaaatact attctaaacc ttcaatctca tctagggtag
     5581 tgggtaatgt agctaaaggc aaaagaatta tcattaaagg cgttacagaa caaaatggca
     5641 acgcatggta taagatcgaa gattggatgt atattgatgc aagtgctgtt tcatttagga
     5701 gtaaaaaatg aataaaaaat ctatattaat tttatgcgca acgctacttt ttacagcatg
     5761 tgcaagtaaa caacaaatca ctaaagaacc aagtgttgat gctcaattaa aattacttgt
     5821 tgatggtggt atgaaatata cggatttaga caaacaagat gaagatgaac ttattcgtgg
     5881 attgcttaag aattcacctt cttttgcaca aagcaatcaa caaagtgcag taaaagaaaa
     5941 catggtgaag ttgccaaata atatgccttt gtttagacaa cctttatttg cacaaatggt
     6001 tgtttttcct tatgtaagtg atgatggtat ttatcacggc tatagtgaaa gttggctaaa
     6061 aatcaaagaa ggcgagtttg ttcttagcga cccaagaagc aaacaggatc caagtgaaag
     6121 aatttttgat atgaatgatg taggtacaaa atgagtttaa gtgattttat taacgaaaaa
     6181 ttaggtatta atcagtctgt aaagaagatt acttctttgc agactaatgt gtggaacgct
     6241 tgcatgcaaa gatataaatt ttcagacttt ttaccttata tgagctacga ttctcaaaaa
     6301 gaatattata ttaataatga taattctttt ggaacagttt ttttgtgttc tccaagaatt
     6361 agaatgggtg aatctactgc tgttgctgtt gaagaaatgc taggcaaatt gcctgaaaat
     6421 atgtttatac aatttacact ttttggaagt aaaaatatca aagatatagt tgagtactgg
     6481 aaatacatgc acctagaaag agctgataga gaaaataatg agcttttgtt taaggcaatt
     6541 aaaaatatgg aagagtttta ttattccaaa accaaagaag gtatttcaag ttctatgact
     6601 acaagattaa aaaattacta tcttttagtt tctataaaat ctaatagcga agaagatgta
     6661 atttcttata aacatatttt gaaaaatatt cttacttcaa ataatttttc acctgttgta
     6721 gctgagcctg aggttttaaa acctatgctt tacgagcttt ttaatggtaa tcatgatatt
     6781 aataatattc caaattatga taggacttgc tatcttaata gacaagttat tatgcctaca
     6841 acagagattt taattaaaga tgatgaatta aaaatagatg gtagaagttt tattagttta
     6901 acaccacaat catttccgca agaagcacat attggtgatt ttggggaaaa attaggtgat
     6961 tatattagta gggctttgga taataatcaa ttcaaagata cttttttaat tactgcttct
     7021 gtttgtgctt tatctaagaa aaaaaccgca cgagtaaaag ataatcattc tatgcttttg
     7081 acacaaaaat ggagtgaaaa tatttttaga cagtttgcag cagccagaaa agaaagcgtt
     7141 tctatacttg aaagaataga taatcaaaaa gaaaagcttt atgcttttga tttgaatgtt
     7201 atagttagtg gtgataatta taatgaagct tctttaaatg caagcactat tatttcttat
     7261 tggaataaag gcggtagtaa agctattgtg cttgatgaag ctttaggaat tcatcaactt
     7321 aatcttattg cttctttacc tatggggatt aataaagaat atatgtttga tattactgta
     7381 aaatatcgtt ctatgtttcc tgatcaaatt tcacaattca ttcctttaga agcagatttt
     7441 aaacttaata ttccaaattt gattttattt tcaagaagag cgcaaattgc aggacttgat
     7501 ttgtttgttt caagttcaaa ttataatgct tatttggttg ctacttcagg tgctggaaaa
     7561 tcagtgctat tgaatatgct tgcttttaat tcttatgcta gaaatgatag aattttcatt
     7621 atcgatcagg ataactcttt tattaatatt tgtgatgcgg taggagggca atatcttgcg
     7681 cttgatcctt caaaacctat cagctttaac ccttttagcg gcttaaaaaa taatgataga
     7741 gattctttcg cagaggattt ggaatatcta tcaaggttga tttatatgtt gggaagttct
     7801 aaaaatcaag atagagcctt agaagatgaa agacttatta aagctaaaac acaagcaatt
     7861 atggaggagc tttttttatc aaaaggcaat actatggaag ttacagatat tagagatgaa
     7921 cttgccaaag tagatgatca acgctttaga gattttgcag atcaattacg ccctttctgt
     7981 aaagaaggaa tttacggtaa atattttaat ggtccttgtg agtttaatat agaaaaagaa
     8041 tttattgtaa ctgaatttaa agggcttgaa gggtatgatg atttaaaaga tccgcttatc
     8101 atgcttttaa tctatcatat taatcagctt atgtatatga gtacagatag aaaatcaaga
     8161 attcaaatca tcattgatga ggcacaccgt ttcttaggaa aaaatccaaa aatggatgac
     8221 ttcatcgaac aagcttatcg ccgtgctaga aaatatggcg cttctgcaat tattgcaact
     8281 caaggttttg atgatatcta taatgctaaa gatggaggat taagtcgtgc aggaacagtt
     8341 attgtaaata actcagccta taagattttt atgaaacaaa ctgaaacttc tgttaatatg
     8401 ttaattaaat cagaagtgtt ttccctaagt gaaactgata aagaaatttt gcgttctatt
     8461 aggactataa aaggagaata ttcagaactc tttttgatga ctcctgatga tgtgaaattg
     8521 ccctatcgtt tagtagtgga taagtatttt tactatctta ctactaccga tgcaacagat
     8581 aaagctaaaa tcaaagaatt aaccgatcaa ggaatacctt taggagaagc cattgattta
     8641 cttgccaata ctaagacaaa aagcaatgaa gctaagtaaa aatcaaatta gaacgcttat
     8701 caataaagct ttatttgttc taattgcttt tattattgga aatatagttg tttcagcttt
     8761 atctcaattt tatggaatag gcgtaattca taccaaaagc atcgataaag atgttttcat
     8821 atatcaaaaa aagtttcaag gagatttaaa agattcttta atttattttt ctttacctgt
     8881 gcaaacaaga tattttaata aggattctaa ctttggaaaa tatgtaagat gtgaagaagg
     8941 acaaacatta agtgtgaaag atttgaaata ttattgtgac aatgtttttt tgggtattgc
     9001 tcaaaaaaca gataaggatg gaaataaagt agaacaattt atatttaacg gagtcatacc
     9061 aaaagataaa ttttttgtaa tgggaacaca tcctagaagc tttgatagta ggtattgggg
     9121 ttttgtagat agaaaagata ttaaaggagt ttctatatgg gcattttaaa aaagagggtg
     9181 ataatttctg ctattgcatg tgcatttttg ttgccaagcg ctttaaatgc aaatttgtca
     9241 agctttattc aaaataattt aggcagttct atcacttctg aaaattcagg ttattataaa
     9301 tctcaggttt caggttttat tagtggcggt agttcaagaa ttagatgggg tggtggtgaa
     9361 actatacgcc cttattcagt aactgcgcca agttttaatg tggggtgtag tggtattgat
     9421 atgatctttg gtggattttc ttatcttaat tttgagtatt tggttgaaaa actcaaaaag
     9481 attgcttcag ctgcgcctgc ctatgctttt caaatggcac tttctacgct ttgtaaagat
     9541 tgtcaaacca ttatggatga gcttgaaaaa atagcaaatg ctattaatag tatgaacttc
     9601 gatacttgcc aaatgacaac aaattggact aataaatttg gaaaaatgct cagttctaat
     9661 acggaaagtg gacaaaacga tagttggtta acttcttttg ctaaaggcat ggaaggaaca
     9721 gctcaaacgg tacaaaattt tgctaaagaa gcaaatgctt ttgtaaatgg aacaactcct
     9781 gataaaagcg gtgaaacaaa tgcagctaaa attttaaaac aaggatcaat tattcaaaaa
     9841 ataattgaaa aaggtaaagc aagttttttt gctgatgctt ttggagaaaa tcaatatgaa
     9901 gatattttaa ggggtgtttt tggtgatttg gtagcttata ctgaaaaaag tacttctatc
     9961 actaataaga aaatgagtga tcctgaaaaa gttatgctaa taggtcctac tttaaataca
    10021 gacaaattca ttgaagcgct atggaataaa aatggtgaaa ataaatctat aacgcttgaa
    10081 tttacagctt atacgatcaa caaagatgaa aatggtttgt atcaagaacc tgtaggaaaa
    10141 gaaacaaaag taaccataga taaagatatt cgctctttat taattgaaaa atttaaagct
    10201 atcgttgcaa aaatcaaggc aaaaacttct ttagatgatg cggataaaaa cttaattaat
    10261 gctgcacctt tgcctgttgc cgatatttta aatattgaag catcaacagg acttaatggg
    10321 gatgccgttt acgaatttgt ggcgctttta atggtagatg cttttgttaa tgagcttttt
    10381 aatgagttta taacaaatat caataccgta caaggcttag atcctaaatt ttcaagcgat
    10441 cataaagatg atcttgctaa attcaatgca gctgttgcta aagtgcaaga aactacaaga
    10501 gctctactta gtgaaaatgc acaagctatt attagagata atcagcaagt tgattcaatt
    10561 agaaaaatca tttcgaattt ctatggagtt agcgatatat tcaattatgg aacaggtaga
    10621 taggagaaag catgagaaaa tatctttttt tagctcttgc aacttgtagc tttttacaag
    10681 ctgcaaatga tgctgctgct gaaggcaata gttttggttc acagctaaat aattatttca
    10741 agtcaaatgc tgatacggct attaattcac tcacaaatgg aggtgaaatt agaacagttg
    10801 atggaaagca aaaagctaat gtacaaatgg cttgcgatga atctaagagt ggagaatttt
    10861 tgaatataga ttacacaggt acaagtgata tcaatattaa aattaaattt gataaaaatg
    10921 ttgatggcaa agtagataag atttggagtt ttgataatgt tagcggaata tgcaccaatg
    10981 gcgttgttaa gtgtgataaa aactcatgga ataattgtga gtattttcag tataactatg
    11041 gcgataatat taatcttgtt aaaactacaa ttgataattt aaatggatgc tactgtatta
    11101 atagttcttg tggttctgca gcggcaaaaa atagagataa aattctttct gatattgcag
    11161 gtcctatcta ctcagcatta tctgcaaaaa ctcaacttgt tctttctaag actactaaag
    11221 taggcagcgc cttaagttat agaggacagg actattccgt atgtgataat tatggacaag
    11281 cagttaatat tgattcatcg agtaatttag aaggtttagg acaagaatta gcggcttcac
    11341 aatcaaacaa tgaaaacagt gtttattctg tttttcacaa aggaacggat aatacagtac
    11401 ctaaagatga aaacttcaat aataaggttt caaatagttc agtatcgatt gatcaaagtg
    11461 ctaaatattc aaaaggcagt tcaaaaatag atttttctta catagatact acgagtggaa
    11521 aaaatgttgc aggcgatatg caagctactc ctgatgtaga tgctaagttt tgcgaagtga
    11581 atgtagccaa agaagatact tcagctttca acgatggaac taatagagaa aactcaacaa
    11641 acaatactac agtatatcaa agtgagataa gagaatgcac taacaattgg actaaatgcc
    11701 ctgttaatgg aaaaaatgaa actttaaagc atgattgtgg aaaaatcaat gatatgggtg
    11761 aagctttagc acaattatca gcacttgatg aagcaagtaa ggatatggta tgttcaaaat
    11821 aaaaactact ccaaaggtgg taagtctttg gagtagggct ttacagaagg cggttagcta
    11881 ctttttagat ttaaagaata tttttcttat ctcttctcta aaaagtgtga ttaacactgc
    11941 ggtaaccgca atgaatgtat ttagaaaatc cattgtggac tcctttttag gtgtgatttc
    12001 ctcccgcata cccaacttaa tagccaaaaa aaaagctcga ccctttttaa gaatcgagct
    12061 tttatcacac ctacaaggct ctgtaaaacc tttgttgtcc atctacctca tggataaaaa
    12121 tattataaca caaaatagta aaaagggaaa tgatgaaaac atttaattgt aatattgaaa
    12181 ttaataaaaa taaaactaaa caaccaaaat tttcattcaa tgataaaggt ttatttgatt
    12241 ctcaaaaata tgatattacg gatgttggta atttgatttt tgcaagttct ataaacaaaa
    12301 tatttggatt caccacaaaa agcttcaaag agatgataat aaaatgtaat acaaataatt
    12361 tactaaaaaa tgaatccgca ttcgaatcta tagaattgaa aaaagaagaa gaaaaattta
    12421 cgctagattt tcttattgaa tcaaataaaa caagtgtttt atcagttttt aaaggaaaaa
    12481 taatatgaaa aattacaatt tgttaagatt ttttagtaag aatacatcgg ttgaacaaat
    12541 tactcctaaa acattaagac ttgctatact cctttcggcg agtcttagct tttctcaagc
    12601 tgctattcaa tgtacagatt ataatgattt taaacaattt aatggacact attatactgc
    12661 tactgttcaa aaaatgactt ttgaagatgc aagaaaacta gcagaagata gcggtggcta
    12721 tttagcaatt cctgattcta aagctgaaaa tgatttctta agttctttgt ttaggggagg
    12781 gcagtatgct tggataggcg tgtatgatcc aagttacata agtaattatt gtgttgaagg
    12841 taattcaggt tgtatttatg atgatagtcg ttttaaaaca gtcaaaggta atccattaac
    12901 ttataaaaat tgggcgcaaa ctcagcctga taatttacta aaaaaatatg atatcgtgga
    12961 tggaaaagag agagtatctc ctttagggga gcattgggtt gctatggcta gccctagcgg
    13021 acaatggagt gatcaaggca atcattttgg agatacaaat aatcctgtga gaaattacgc
    13081 tcttttagag tttgacaaaa tacctgattg tgcaggtggt ggtagcgatg gtggtgataa
    13141 tgggcacact gcaacagatg ctatgcaatg caatacaaat tttagcgatg atccaaactt
    13201 caaacctgca aatggacaag gacaatccat agcttgttta caaaactctc agcaaaaata
    13261 cttttgtcct gcacaattaa cacaatgtgt taattcagat gatgcagtag atggtagtag
    13321 taaaaaaata gaaggtggtg ttttaaaaac aggtaaaaca aaagtaagac tcactttttc
    13381 caaaagtata ggttataatg cgtggcaagt cgtgacaaat gatatctata ttactgatat
    13441 tgatgcaatt gatagtttta aacttgttta tgcaggagct gatgattggg tggttccttt
    13501 tgctccaaat tctacagttg ccgttgttgg taataagcca aataatacta aagatgcact
    13561 agattacatt ccttatcgcc caaacaatga taactatggt gagctttcaa aatttagcgg
    13621 aaaaaactta aacatagaat taaaacaata tttgcacaca ggtattaata agtctgtagc
    13681 attttttgcc acagtaggaa gcggtggctg gcagctcact tatgaagcaa caggaaaaga
    13741 tataagttgt agtaattttg gaagaaattt aaattgtaca gaagaaagcg aaacaattcc
    13801 ttttagtgct tataaatata cttgtcctgc aggttatcag cctaaagagc aaggtggagt
    13861 gtgttcacca caaagtgtag atgatttgat tgatacaaat ggagatggta taggtgatag
    13921 ttgtaactct tctattgctc ctgctaaaaa ctgcttaggt gtaacaagaa cttgtccttt
    13981 caatagtagt agagagtgtg tgctaataga caacaaatat caatgttctc cttttccttg
    14041 ttttaaagga gtaagcgatg tagaaaatac tgatactcct gttggtgtta atgatgcaaa
    14101 caataatggt tggaatgatg atggtacttg ttcaggacaa atcattattt ttaatggaca
    14161 agataatcgt tgtaaaaatt gggatatgtt tggcggttta cttggtggtg gatgttgtga
    14221 taaagataat gtgtttttag gacttgtagc ttgtaaagaa gatgagaaaa agcttgctaa
    14281 attaaacgat gcaggaaaat gtcatgaagt aggaacttat tgttctaaaa aggttagttt
    14341 aggttttact aaaatttgcg ttgaaaaaaa gaaaagtttt tgttgcttca attctaaatt
    14401 aggaagaatt ttcaatgaac aaggacgccc tcagcttgga aaaggttggg gaagtgcaga
    14461 aggtccgcaa tgcaaaggtt tcactcctga agaatttcaa aaattagatt ttagcgaaat
    14521 tgatttaagt gaattcattg ctgatattgt aggaagtttt gacacaggaa aaatacaagc
    14581 tgattctgtg aaaatacaag aaaagattca aaacaatatc gagaatgcaa cgaaaaaacc
    14641 tacaaattaa aaaagaaaat aaattattag aaaggagaga agcttagtta aaagtttgtt
    14701 tggtgtaagc caaagggatt gttctaaacc ctgcaaaagc aggggatact caataagcct
    14761 tgacatagca aagcattaag agtataatta taagaacaat gtttagcaat ttaatcaccg
    14821 cctttctagg ttatgattaa tgccaaaggt agccgccttt ggcatctacc ttttataatt
    14881 atactaaaaa caaactcttt aacttcttaa aacagtccat gaaaagattt tactttttat
    14941 tctttagcac tttgtttttt gcaccttcat ttttatttgg tgcaaatatt gaaaatataa
    15001 aaaaatatag aaattcaata gaaaggagag aagcttagtt aaaagtttgt ttggtataag
    15061 ccaaagggat tatcctaaac cctgcaaaag caggggatac tcaataagcc ttgacatagc
    15121 aaagcattaa gagtataatt ataaggataa tttttgttag cattaagctc acctcccttc
    15181 tgggcggtaa attaacgcta aagggtggca gccctttggc gttgcaccct tttataatta
    15241 taccaaaaac aaactcttta acttcttaaa acagtccatg aaaagatttt actttttatt
    15301 ctttagcact ttgttttttg caccttcatt tttatttggt gctacaaaca tagctaatag
    15361 caatttaatt tatacttggg gttatggcga tgtgatgaat gaaatcatgc aagcggttaa
    15421 aggaataacc actgaaacag attatatcgt taatgcagcc ttagctattt cattattact
    15481 ttttagtatt aaaaaagcaa tggatggaca aacaaaccct gtgtttgaat ttggaaaaat
    15541 gtttatgctt tttgctgtag tgtggtacat gtttttaagg gcaccaaatg acaataatca
    15601 ccgcttcatg attcacgatg aggtgacgag taaagattat gttatttctc aaattcctat
    15661 aggcatagga aaaagctttg cattaatgac gcaatttgag aaggttatcc tagaagctat
    15721 ggaaaaacat ttcacaactc cacagtctac aaatttctct aatgcaggtt taggtttttc
    15781 acttcaagtg atgagtactt taccaaatgt aaagctttcg gctattgatg caactttgca
    15841 aaaaaatatt gatttttatt ttagaaactg cgtttcagta ggtatcttgc ttaatcaaca
    15901 aggtagaaat ctttttcaaa actctgataa tttaatacaa gatcttttca caaacatagg
    15961 caatggctct cagcttactc ctttgtttga aaataacaat aatattgaaa aacaaagtgt
    16021 tgtgccttgt tctgatgcag gtcctcaaat cgttgaaatg attaaaaacg atacagatga
    16081 agctatgaag attcatgctg ctttgcttgg tatggcgaat gatatggcaa attatgaaca
    16141 aaagttctta ggcgctgcac aaatctataa cgaacaagct gtaagtgcta gatcttattt
    16201 gcaacaatcc atgataatgc ttgcttctca agatgcaatc attaataccg ctaaatcagt
    16261 aggtttaaat cctgcttctg tggctgcaaa tactgcttat gcggatcagc aattttacgc
    16321 aagtatgcaa gcacaaggac acatggcaca aacttatttg cctttagcta aagcttattt
    16381 aacagctatt atcataggtt tatcttggct tgttgctttg ctttctattg tatttggctc
    16441 ttacgctcat attaagatgt tttttactct atgtatttgg atagtacttt ggactcctat
    16501 actttgtatt attaatttta taaatgattt taatcttatg aatgttgcac aagtgataac
    16561 aggtggaaaa gcagctttaa gcttaggaga taacattctt atattcaaag aagtagcaag
    16621 tagatcaaat ttcatgaatt atcttgtaat gagtactcct gttttagctt atgctatagc
    16681 taaagcaagt gagcaaggat ttgtaacttt tgcttctgga ttatctcaag ctctaacagg
    16741 tgcttcaaga gctgctggaa gctttgcaaa tcagcaagct ctatctacac aaactagcat
    16801 tgctgctcct agaggagatg aagtttgggc tgtgggtgca ggttataata ctcttcaatc
    16861 ttcgtttggc gcaggtggta gaagttttat gggaacaaga gatatgcaac atggtggcga
    16921 attagttaaa gataatatga caggaagttc cgctgtaatc aatgctgatg gttctatagg
    16981 taatgcttct attaaaggat taaatgcggg tataactgca agcaatttag aaacaagagc
    17041 acacgctcta agtgatgcga ttcaaaattc taacctatct caaagagctt tagaagttgc
    17101 tagtggaaaa ggagatagct tagccttatc agaaaatgat agaagtgcta ttactaatgc
    17161 aacgcaacat gctttagcta atgcttattc taaagcaaca ggtgtggatg taaaacaagc
    17221 ttatgatgat gtaatgaaag gaaatattgg ttttggtgta ggtggagtat ctacttcatc
    17281 aatggaaact gaagcttggt atcaaaatct aagcaaaaat caacaagaaa catttgataa
    17341 aacatttaat gaaagtattt ctaatgaaat tggcaaaaat agagatgcaa gtgcttcatt
    17401 tagcaatctt cttaaaacag gaaatgttac aaattctgct agcatcaaaa gttctatgga
    17461 tagctataat gaagctaaaa cacttaataa ttcagtgggt tatgatggtg gagcttctat
    17521 cgttcaaggc tatatcaatg aaaattacgg tggcgtagtt aataaagaaa atgtggcttc
    17581 tgctatgaat gctgttgaaa atatggctgc aagaggggat atgcaaggat tatcacacta
    17641 tacaggagta gattctaatg tcaattcaaa tggattgttt ggacaatcaa aacacaatta
    17701 tcatgatcca agaggtgtta tgactgatca caataaagcc atagatgatt taaattcaag
    17761 acaaaaaggc tttatggcaa caagaaatgc ccctaatgat gttaaatcag aaggattagc
    17821 aggtggaatt caaaaagcag caaatgtagc tgagtataaa gcaggaactg ctatagaaga
    17881 aagaaataat aagattgatt atgctggcat acaaaaagat attaaagatg gaaaagctga
    17941 cattaacaaa gccatagatt ttggtaacca aaatagaaat atgtgaaaat aagcctagtt
    18001 aaaaagctag gcttagtctt gattattata gtatatattt cctggcatat ggctatatgt
    18061 tggatccgta atataatctg ttgttgattc attgctgttt aatattccaa tatttttttc
    18121 aataaaatct ttaacatttg aatttatatt atctatattc tcaggtgtta ttttatttat
    18181 tttatctttg aataagtata aaatacaaca aactattaaa ccgcttacaa taaacgcaag
    18241 acttactaaa taagtgatta agtgcgcttt atccatcttt attcctttca atatttttta
    18301 aataagtctt gatgccttcc tatgcgataa agacttaaaa ttttatcatc tcttttatag
    18361 ataataacca gatctccaaa tatatgacat tctctaaaat ctttaaactc accttttaaa
    18421 gcgtgatctt tgagtcttgt aggtaaaaca tctaagttca ttaaacattg aataacatca
    18481 tcaattgtgt ttaaatccca agactgcttt ttaactttct catagtcttt tttaaaactt
    18541 cttaaaagat taatttttcg catttagtct tgcaatgctt ttttaaaatc ttcgtaattc
    18601 tcaaaaaccc cacaacttac aggattgttt aaagcttcta ttgtttcccc tgaaggaatt
    18661 tcttgttcta tttcaagtgt tgcttttgga gaaagactta ctatgctttg tacagctttt
    18721 aataattttt catccgcatt atttatggtt aatgtcataa gcaactcctt tcaaattata
    18781 taacataatt ataacatatt ttaataattt ttgcaagtat ttatgctata aaatgcctat
    18841 ttttaggggt tttaacgggg ttcttttttt tatttaactt gggaaaagtc gccaaaatct
    18901 tcatcgattt aattgtattt tcacgctact ttgttcgcat tgcttttaag cattaaacaa
    18961 tcagaagcca cgcacttccg atcatttatt tttgtaaagt ttaaaagttt ttttgtttgt
    19021 attaagctaa gactaagcgt ggatcttata aaatagttgt aagaaagtta ttttaaaaga
    19081 tagtcgatta aatcgattat cttatttact gtctccaaaa agagaatcgt aaattcgatt
    19141 atttctctaa tcatagctac cccctttcta aacaatcgga agattagcct tattggtact
    19201 taaatacaag ctatattata gcaaatttca tcaaaaaagc caagtatttt tgctataaaa
    19261 tgcctatttt taggggtttg aaacggattt cttttttatt taacaaggtt atttttataa
    19321 atcgtaatta aaagtatttt gtcgtttttt gaatctatat aatatggaat gacatatttc
    19381 ttaaagataa aatctcttat gttttcatca ttaaaaagag tagattttcg aaatttataa
    19441 ggcatattgt caatacataa aatagcatct tttaaagatt ttgaaaaata attttttgca
    19501 ctcacactat ctttagcaat aaaggctaaa atattattaa gctctttttt aaatttatca
    19561 ctttccacaa ttttcattta cagccattca ctacctaatg gagttactga taattttcct
    19621 tgtttatagt gtaataaagt ttcttcagct tcttttttta cttcatctaa ggttcgatta
    19681 tcttcataat tatccaaagt agcttctaaa tcatttttag aaattttaaa aatagctcct
    19741 gcattttttg acaaacattc taagcttttt atgaaatcaa tattatcact tgtaatggtt
    19801 atagtgtgca ttataattcc ttttttgaag tttattaaca tgataatacc atattttaat
    19861 aaatttttgc aagtattttt attgtaaaat acctattttt aggggtttga atgggattct
    19921 tttttttatt taactatgtc aatttttaag tgcttatttt ataagacttt atagcgctat
    19981 ttgcaagatc agctaagaat ttacttctat tatcgcttat tgtatctatt gcctctacta
    20041 agcttttagg caaggtaata ttaattctaa tttttgcttc attatcaata ggttctttaa
    20101 tataatcacc tttttcaagc ataacttcta atgctccttt aaatgcttct ttgagatctt
    20161 ttaaggcttc tatttcattt tcaccatctc ccataatata agggaaatct ttatatcttg
    20221 caaaatatcc tccgccatct ttttcatcaa gtttttttat aataatttca taaggtagat
    20281 taagatagta atctaagtct ttcataattc attctcctgt tatagctttt aaaaccattt
    20341 tgacatatat agcctttata gggcgtttaa atggaatagt aataagatca cattcttttt
    20401 ttctaaattg ataatgtgat ccgcctttat taaaacattc ataaccttcg ctttctaata
    20461 aaatcttaag cgtttcaaag cgcacattgt taggattatt ttttaaatct ttaataattt
    20521 tatctttttt actcaatatg atatccttat gagtatgtat tatacacact ttttattaag
    20581 tatcgcttat aaaccgaacg caattctttt aatcttgctg tctttgtatg tttaattgaa
    20641 agtattaaga ctgagattat tgagctgtgt tttgaaacgg atttcttttt tatttagttt
    20701 gaaaaaaatg aatgcgaatt tgtagtttta tatactaaca aaggcgaggg gctttactgc
    20761 ccctgcggtt ttgttagaaa aatacttcaa ctttaagctt aaaaaaccta aaatttagat
    20821 ataatctcac aaaacgctta ctatgtcgtt tcatagttag cctttgttgt aattttccgc
    20881 tagagttgca gctctaaagc ggatttttta ttatagcgaa tcttgtttta ttataaattt
    20941 taaaattgat aattttttaa tagtatctat ctactcgatt ttcacgccct ttttaacagc
    21001 atattgactc tgtcttttgc gaaattgcaa tattctttat taatttcgca accaaaggct
    21061 tttctattgt ttcttatggc tgaaattatc tcactcccac ttcctacaaa aggaatgaaa
    21121 atagttatgt attttgtata attaacataa actatatttc acggaataaa gtttgcatgt
    21181 acatataaat aatagtttta tcatctgtat ggtaaattag aatagagaat taaaaaagca
    21241 ttcaaatcta aaataatgca aaccaaaagc cacgcctctt tcggttcaat gttttttgtt
    21301 acaattgtat taagcttaga ctaagcgtgg tttttataaa attttcaacg gttatattag
    21361 atgagataat caacgagttt gattatctcg ttaattaatt ctaagacaag aactaaaaac
    21421 tcaatgatct tactcatcat gcctccttct tataaccgaa agagtagcca tacttaatac
    21481 gctttaatta tagtattttt aaatgaattt ttattatctt gtattgtttt attttataaa
    21541 aattttgttt tagcctatta ttaattgttt gtatgataaa ataattctgt cctactcatc
    21601 cctaaagtgt tagtttagcc tattattaat tgtttgtatg ataaaattta ataaaataga
    21661 attcatttct tcattgtagt ttagcctatt attaattgtt tatatggtaa aatagactta
    21721 tctcaaaagc ctattttacc aatgttttca ctttcaaatg gtgtttttaa cccattcaga
    21781 ttcaactatc gaaagaactc ttgcagtttt gtaaatatta tcatgcggat ttagtatagt
    21841 tctcacagcg taatactgct cgtttttaac ttcctctttt tcaactacaa ctatcgtatc
    21901 aactgattct tcttgaagtt tcaaaggaat gtataaaact accctttgct tataagctgc
    21961 aggaataatc atcttttgaa gattataatt atctttgatg attttcaatt caccattaat
    22021 aatgtgtcct atgaacctat catttagttt tttcacaatt tcaggtaatc gctcttttct
    22081 ctcaaaaaga tgcaaatgat ttactctaaa atctaattta ctatcaaaaa tgatttcatt
    22141 tttgaatgta tcataatcgc ttaaagattt aggtatttct aaatcatcta aaactctatc
    22201 tccattagaa caaaattttc taaaaatata tcctccattt tcctgctttt caaagtatgc
    22261 aaatattgga aaaacacctg tgctgtacaa tcctgtatta aagcatgctt ttgttttgtc
    22321 tttattataa gtaataatat caggatagct tttattttcg taaatgaact caaaatattt
    22381 aaatagataa gaaaataaaa tattatttcc gtttccccaa aattcttttt gagttatatt
    22441 agaaagctct tggagtgtat ttagaaaatt tggaaaatag gcaaattgaa acaacaaagg
    22501 tttctcttca actttgtttt gaatttgatc acgatttgaa gtcttgtttc ttgtggtagc
    22561 ttttttaaca taaactaaag aaggttcgtt ttcatctttt tcaagatcaa agcctgcttc
    22621 tattaatgcc ttactacaat tgatttttaa atcatatttt cttttcaaat attgactgat
    22681 atgtcctgta gtaacatggt caaatttagt tttactatct tcataggctt ctaaaattaa
    22741 tttttctatg tttttttcca cgctaaaaac ctaattgtcc tttcttataa tcttctaaac
    22801 ctttcaatag tccaaaaagt atgtcagaat caaccgctcc ttcaatagga gtgcctatta
    22861 cttttcctgt tggagttaaa atataagttg ttggagttac accattaaac aataagtctt
    22921 taggtatcaa tccattagta tttaaatcag aaatagcaac aatgaaattt ttgttaaggt
    22981 attccattaa atctctatta tttaacacat cattcataag cttgtgacaa tattcgcaag
    23041 tgtttgaaac cacaaaaaaa atcattaatt ttgcttcttt taatgcttgc ttttgtgcta
    23101 catatacatc atcgtagatt ttagcctcta gcaccatagg gctaaaggct aaaaagatag
    23161 ctaaaaataa gattcttatt ttttttatca tgcaatatcc tttttagaat aatcctgcaa
    23221 tctgatttgc aattttatct tctaaaatag gcgtagcttc aggaagttta agtcctgttt
    23281 tcacagcttc tgcaaaaata atagtatttt tttctatata tttgccttca taagtttgtt
    23341 gtgtattatt gatttgattt gaatttaaat gtcctacttt atcactgcga acatttccgc
    23401 caaagctatt taaaaagcct gagctttggg aatctcttac gctagcttgt ccgctaacat
    23461 taccactaga agttaaaact ttaccatcag ctttttgctt gatattaata tctacttgca
    23521 tttgccaaat tgtatcttcg gtaagttttc ctaaaagtcc tcctactaaa gcacctgcag
    23581 cacctgcagc aaccatacct cctgcaccgc cgccattata gccactaact gccacacccg
    23641 tagcacctcc tgcaacagca ccgcctacag cattattttc ttgtttttta tcacaatata
    23701 aaatattagt acttaaaata taatttgctt tatcgggatc atctataact ttatatcctt
    23761 tagcttccaa agcacttctt aatttaggtt ctaaatttac atcatgtccg cttgtatttt
    23821 tgatatttaa aaatacaatt cttttttcct tagctacagg atcaagaaaa atactttgac
    23881 tcattgttgc attagtttgt aaagtagttg ttaaacaacc tgtgagtaaa ctagctgcca
    23941 aaacgctgca cattcctgtt ttaaaaatag ttttatttat tttcattgtt ttccttttta
    24001 ttaaatattt tttcaaaaat ttctttaaca tgttttttga atttagcgcg atcctcttct
    24061 gtttcgcctg ttaaattatc taagcctttt tctaaagttt taagaaactt tccaaaataa
    24121 tccttttcct gttcttttgc atggtattct gaaaattctt tagaaatttt agattctaag
    24181 taagttctaa aaaattctgt tttatttaaa acaacttcta agtatttcag agcttttgct
    24241 tctatcttat acttgtcgtt tacaaaaata tcaactagat ctttaaattc taaaatattt
    24301 tcaatctcaa taacttttat aatattgatt gtatttgaaa attcatcagt tttgatatta
    24361 tttagaattt caactgcatt tttttccatt ttttcctcct tttttatgtg tgaatttgtt
    24421 ttttttcttt ttaatatttc aacttgttta tcctcctctt cttctaattc attaatactt
    24481 ttatcaaggc acttaagatc tcttaccatc gaattaagat tataagctct tcttaatatc
    24541 ccatacaaat ttgctttatt atcttctgtt agaatgtgat aattcttaat tagttctaaa
    24601 tatctctctt cggttagtgc gttaaaagat gcttcatcta aaatagaatg aattaattct
    24661 tctctttgat taaataaatc atctttacgc ttttcaagaa tttccattct tatttccgct
    24721 tctttgattt cacactcttt taaaaatttt tcttcgcttg ctttttcctt ttctattttt
    24781 atgagtatta ttttttcttt tagcttttta aaacaattca tttttcaccc ttatttagta
    24841 taaaaattgc tattcatgtt ttgaataaat cttgcaagtc catcactttt agcttgttta
    24901 tttatttcgc ttaaagcata attaatgctt gtttcaccat aagccacaaa atattcttca
    24961 ttggtatctg caggcgtgtt tgtcattttc tgataatctt ctacaatagg atcgtagttt
    25021 ttaataaaaa tcacagcagg aactttagta atattaaatc ttctagttac ttttggatta
    25081 atttcaatat tgtaataata aaaattattt ttatcttctt tatttttgtt attagggtct
    25141 ttaactaaaa gatcttgcaa ataagaaaaa gtaggattaa tatatcttgc atcatttcca
    25201 accaatcctc ttaaaacaaa ggttatatcg gtttttacat tttcaagcaa cttaaaatag
    25261 ttttgaatgc ttgatttatc cattgaagaa gagattacta tgaatatttt ttcattagga
    25321 tttaaatatt tgtttgtgct gataaggtgt ttagaatttt ccatttgatt aatcatatct
    25381 ttagtatttt gcgaatactc gccaagatat tcattaaaat tcatgctttt atcatacaga
    25441 atatagtttt ggttatcgac aatctttttt tcaaaagcat cgcttcttct catatcggaa
    25501 acaattttag cacttttatt agcttctgcg ctttggttaa actttatgtc atatcttttt
    25561 tttatttcat cctttgttaa attcatatct tgtctcatag aactaaggtt aaaatcttta
    25621 gtgtttttat aaagctcatc gactgaaatt ttattttgca ttgcagcttt atcttttaaa
    25681 tatttattat gaaatatttg ttcttttgtc aaattatcat cgattgcaaa taatgatgaa
    25741 catagcaaaa tagaacctat gatttgtttt ttcatttctt tcctttcttg ttagtttttt
    25801 ccaagctcta tcattttatg aataggagct gttttttcaa tatgcttaaa aacaaccaag
    25861 caatcttcga ttataatgtt tgcttcttct tcagtaaatt tttcattaaa aagtgtaatt
    25921 aaatccattt tcatacactc gtttaatttg ctaaaatctt tatcatcaaa gctattaata
    25981 attgaagcta gatatgcttt atgtgcttca cttttttctt caagcctttt gcttacccta
    26041 caaataaaca aagttatagt gtataatttt ctgtctattt taaataataa tgaaaatagt
    26101 ttttcccaaa tttctttatc agaaacaaga gaaataatct tttctaaggc actgttctca
    26161 agttctgaaa taatattttt ttcattttca tacaaagaca attcatcaat taattgattt
    26221 aattcttgtg aaatttcatt tttgtaagta ttttcattca agcaaggctc ttttccaaaa
    26281 aaaataaagt ttggatttgc attgaaggtt ttgatcaatc ttataataaa ctcgcttgtt
    26341 ggtctcaatt ttttattttc gtaccttgaa acaattgctt gattgatgtt taagtttttt
    26401 gcaaattctg attgagttaa atttaatctt tctctaagtt cttttataaa cacaacaaaa
    26461 cctccatttt atatactaga atgcacaaca ctcttttttc ttaaaaacca taaaagtgaa
    26521 attatctcct gctacaggat aatttttggc aaagctccat aagataccac tttgtcctat
    26581 gcccataccc ataggatgtg gaacaggtgc taaaatttgc aatctatagg aagattttct
    26641 ccaaataggc atagggtatt ctccgcaaag ccctaattgt cctgcacttt cccaaagtat
    26701 taattctcta tgaagtttat aaatcataga acctgcaaca gaagcagcat cttccacata
    26761 atcttttgag cctgtattac ctgaaagtgg gtaagcattc ccccaagaac ccttacacca
    26821 aaacaatgga tctaaagcca cattggcttg agctgatacg ctatctgcca tacaagcaag
    26881 atttgaaata ggattgccaa ataataaagc ctcaggattg atcaaggctg ttagttcatc
    26941 atcttgccat aagggatcta cttcggtcat ataagctata tccacgccac ttgtaatatt
    27001 catacatgca gcatcaatta aaattcctac catgccaata ataggatata tataatagtg
    27061 agattgataa aagactcttg ctctatcatg tccatcacct ttggttcctt ttgaagctgt
    27121 aagcatttca ggcataccaa aacctagtcc cacaaaacaa taaggatctt ttacgctatc
    27181 taacattcta ctaggctcaa aatatcctat aggaattcct atgcgaaaaa ataaaggtgg
    27241 tggagcaggg catatacata taggagagcc tactgaacct tgcggatcag gcataggtcc
    27301 ttgtataact tgtatccctg cgatactaat aggaaaaata cattcccaac aaagttctgt
    27361 taggcttata agtatttgac ttggatttgg agcgcaaaca gctttagtct cgcttgggtg
    27421 aaaaaataaa caagcagcag ctactgcgct gattaaatga gccttgaatt tcatattaat
    27481 ttcccttttt ttaaatttct tttatgctta aattattgtc aacgatttta gttttattat
    27541 tctccatgca aggaatacaa atctcatgaa tctgtatctt attgtcaatt tgttttataa
    27601 tgcttggagt tttttctatc ttaaattttt ctcgaatttg tggattcaaa taaaatactt
    27661 cttgcttaag ctcttggttt aaatcatagt aacttccttc tgagagcaat aatctataag
    27721 aaacttgatt agaaaaacca ctttttttaa accattcaac ttctttttta ttgttaccat
    27781 taataactac cattgcatat gaaagcttta cataatcagc aggattaaat ttaaaaccct
    27841 ttggatataa aatatctcca tttgcatttt taatatcttg atccaaagtg tatgttaagt
    27901 caggataaaa gattttatcc tcaagggcag gttttaatgg aattaatcct ttaggttgat
    27961 aatttttgac attttctctt gcttgttctc gagtcttgaa agctttttgt tctatttgtg
    28021 ctttattttt ttcaatgaat tcttgtataa gctctatcat atctctttct gcaaaatctt
    28081 tagttttgcc taaaaccatt tctttgctgc cgcctgcgta tagaacacta gctaaaatta
    28141 tagtactaaa aaatattttt ttcatatcta tccttaatta tttatctttt tctaaaattg
    28201 cattatcaaa taaaaataaa gtattgttga tgatgtcatc tttgtttgta agtcctgatt
    28261 taactctttg ccaaattgct tctccttttg aatttctata aacaaagaaa ttttcaggag
    28321 ttgttgcaag tttaaatttc gaaattaagt ctttacgctc atctacatta acgtattcaa
    28381 catttacacc ataatcactt tgtagcgagc gatatatgcc tttttgtttt tcattaattt
    28441 ctttatttaa atcgctaaca aaaacaacat aagaaaaatc atcctgatga gctttataaa
    28501 aattatttat tttttcttgt ttttgtctaa acatttcgct tctaccaaat ttgtcatcac
    28561 gaatttctgg atactctaag tttggatttt ctaaaagatt taaagcccaa actttagcaa
    28621 atttttcaga ttgatcaact tgccacttat tcataatttg cattgtcatc acatttgttt
    28681 ttgtaggatt catgatggct atttttctaa ctttttcgaa ggtttcggta aattcttcgg
    28741 ctgttaaaag atctaaatta tttaaaggta tagaagcaat aaataaatca tctgcattca
    28801 ttcttttttg gattttggtt tcgttttttt cttgtgtgtt gttattatca gcaagctcgt
    28861 agtaaaacca accacgcttt gagtctccaa aaaaagtgct tgcttgcaaa aaacaagcga
    28921 gaacaagaat tgtagtagat attttcaccg taaaaaacct taattat
//
LOCUS       DBBXOW010000012        28538 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.012, whole genome shotgun sequence.
ACCESSION   DBBXOW010000012 DBBXOW010000000
VERSION     DBBXOW010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28538
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.012"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(38..697)
                     /locus_tag="ACJE1S_000539"
     CDS             complement(38..697)
                     /locus_tag="ACJE1S_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0806109.1"
                     /translation="MENVFNAQNIEFLMQGLVLTLKIALATCIISIIFGTFLAITKNY
                     GDRFSRLLATCYIDIFRNTPLLLWMLAACFVLPSFFPQMPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFSKFFTLFYIILPQTFRKVVPSLLSQIVTTVKDTAY
                     LAGLQIAELTYNSKNILARLTSFDEILATIGFVAVIYFAICFSLSMLVRYYAKKTAYV
                     S"
     gene            complement(708..1460)
                     /locus_tag="ACJE1S_000540"
     CDS             complement(708..1460)
                     /locus_tag="ACJE1S_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0806110.1"
                     /translation="MNESVGFVDKLRQLLSSWGLYDESSTNPFAIWKFLDALDNGDAF
                     ISGFIYTLEVSILALLIAIVFGTIGGVMATSKIKILRAYTRVYVELFQNIPLVIQIFF
                     LYFALPGLGIHLDIFTIGVLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQ
                     QMRYIIVPQTIKIILPPMTNQMVNLIKNTSVLLIIGGAELMHSADSYAADYGNYAPAY
                     IFAAILYFIICYPLAYFAKVYEDKLKKAHLTR"
     gene            complement(1462..2241)
                     /gene="peb1A"
                     /locus_tag="ACJE1S_000541"
     CDS             complement(1462..2241)
                     /gene="peb1A"
                     /locus_tag="ACJE1S_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HGG0806111.1"
                     /translation="MVFRNSLLKLAALALGACMAFTSANAAEGKLEAIKAKGELVIGV
                     KNDVPHYALLDQATGEIKGFEVDVAKMLAKSILGDENKVKLIAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRVYNFSEPYYQDAVGLLVLKEKNYKSLADMNGATIGVAQAATTK
                     KVINTAAKKIGVKVKFSEFPDYPSIKAALDAKRIDAFSVDKSILLGYKDENNEILPDS
                     FDPQSYGIVTKKDDANFSNYVNDFVKQNKTEIDALAKKWGL"
     gene            complement(2266..2994)
                     /locus_tag="ACJE1S_000542"
     CDS             complement(2266..2994)
                     /locus_tag="ACJE1S_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG0806112.1"
                     /translation="MIELRNVNKYYGTHHVLKNINLCVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKLRQEAEETAYQYLKVVGLVDKANVYPATLSGGQQQRVAIARALCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISTQRNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     VPSEFFSNPKTERARLFLGKILKN"
     gene            complement(3157..3945)
                     /locus_tag="ACJE1S_000543"
     CDS             complement(3157..3945)
                     /locus_tag="ACJE1S_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HGG0806113.1"
                     /translation="MEEKINPSELELNEFIKIINEISGIDLNEKRNILVLKLSKFVSS
                     TGVKTFAEFLSKLQINRQLRQDTLDFVTIGETYFLRELSQLKEIIFYAKSLEKTVNIL
                     SAPCSSGEEVYSMAILGAQNFLKDMMILGIDINSNVIEKAKVGKYQGRTLQRLSESEK
                     RRFFTDIGEQTFSINKSELCTCRFELCNVFEDKFLRLGKFDIIVSRNMMIYFDYDSRI
                     KLMERFYQILADNGRLYVGNADLIPETTFFKKVFSPRGVYYEKI"
     gene            complement(3958..4512)
                     /locus_tag="ACJE1S_000544"
     CDS             complement(3958..4512)
                     /locus_tag="ACJE1S_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheB methylesterase domain-containing protein"
                     /protein_id="HGG0806114.1"
                     /translation="MKLLLIGSSTGGPNQLKFLLKDVDIKNTCVVIAQHMSASFIPSF
                     VNQFNKEALSEVSLLNDKEVLANKIYICQKNTILSGNLNLMANWKEVVTSFKPNVDLL
                     FHSAVPLVKTNKILAVILTGMGDDGAKGLFELYKVGVKCLCENEADSIVYGMPKKAKD
                     INPKLRPMSLKEIKQEILNFINEE"
     gene            4681..5118
                     /gene="rpiB"
                     /locus_tag="ACJE1S_000545"
     CDS             4681..5118
                     /gene="rpiB"
                     /locus_tag="ACJE1S_000545"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HGG0806115.1"
                     /translation="MLRKKIYIASDHAGFMLKEKICTFLKEKQIPFDDLGTNDPTSCD
                     YPDYAHLLASKIDEQSFGILICGSGIGISIAANRHKNIRCALCNESLSAKLARKHNDA
                     NVLAFGGRLIGIDAAIDMIENFIQTPFDQGRHVKRIQKIEVDC"
     gene            5118..5450
                     /locus_tag="ACJE1S_000546"
     CDS             5118..5450
                     /locus_tag="ACJE1S_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806116.1"
                     /translation="MFANWFILTALICATIYLVVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            5447..5995
                     /gene="apt"
                     /locus_tag="ACJE1S_000547"
     CDS             5447..5995
                     /gene="apt"
                     /locus_tag="ACJE1S_000547"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HGG0806117.1"
                     /translation="MTKLTQNEQQFLSESIRVIPNFPKEGIIFRDITTLLNNQKALSF
                     LLDHLSKRYQTMNLDFIAGTESRGFIFAAMICAKLNLPFVPIRKPNKLPSNTYSCEYE
                     LEYGTDRVEIHQDAFRNIKNAKILLVDDLIATGGTALASFELIKKAGGECIEACFLMN
                     LKNLGGEEKLQKHCSVYSVLEF"
     gene            6095..6700
                     /locus_tag="ACJE1S_000548"
     CDS             6095..6700
                     /locus_tag="ACJE1S_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG0806118.1"
                     /translation="MEEFIIRIWNEHVETWGYLILFCWSILEGELGLIFAGLAAHDGK
                     MHVVLAIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLRSQRRKFAVAHLLLQRFGWPII
                     FIQRYMYGFRTVIPMSIGITRYSAKKFAIINLLSAWVWAAITILLAWHFGNLIQNFLT
                     WAKNHWYLAAIMIICFLSLLVFTFKQIEKAILKEKRKKNDI"
     gene            6690..8141
                     /locus_tag="ACJE1S_000549"
     CDS             6690..8141
                     /locus_tag="ACJE1S_000549"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HGG0806119.1"
                     /translation="MIFELSDKKIHGIKADFELVFIQDKNLKPFTNEKDFFKLNNYTG
                     EGILLDLNNKRLFIELKSLNYEDIRLALYTAYKNLEKLNIKSVKLPSILGDCVVRSFT
                     SLVEGVLFGAYNFDKYKSEKKESTLEKFIISAEELNAKKFNLDEAKIGLLRGEILANA
                     TNFAKDIVNEIPEIYTPLKMAEDAQNLAKKNKNITCKICDEKFLAKEKMNAFLAVNRA
                     SAHPPRLIHLSYKAKNAKKRIVFVGKGLTYDSGGLSLKPADYMLTMKADKSGAAAAMG
                     IIKAVAELALELEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSYAQDLKPDLLIDMATLTGACVVGLGEFTSGIMGNNEELQNEFYLSSKKSGEYTT
                     ILHFNPHLKELIKSNIADVSNSASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YIEKSWGYNSFGAGGTGVRMCVNFLIHLLRKNK"
     gene            8138..9241
                     /gene="ychF"
                     /locus_tag="ACJE1S_000550"
     CDS             8138..9241
                     /gene="ychF"
                     /locus_tag="ACJE1S_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HGG0806120.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLGKKIEKLNKEARANTKGAK
                     ESLEMANSLLEHLNKGLPASTYLQKEDEIFQALNKELRLLSAKEVIYGANVDENGISE
                     DNEYVKILKDYANKNNHEVIKLCAKIEEELVGLSNEESAEFLSSLGVNESGLDQIIRT
                     AFSKLGLISYFTAGVLEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDFITY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(9248..10633)
                     /gene="argH"
                     /locus_tag="ACJE1S_000551"
     CDS             complement(9248..10633)
                     /gene="argH"
                     /locus_tag="ACJE1S_000551"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HGG0806121.1"
                     /translation="MKNEMWSGRFSEASNELLKEFNASLNIDRALYVEDIQGSIAHAT
                     MLENCGILKKDELEAIVKGLEQVRVEIEQNRFVFNIEDEDIHMAIEKRLSELIGSEIG
                     GRLHTARSRNDQVATDFKLFTKKSHLELIMLLKELIQTLLSHARAHKRTIMPSFTHLQ
                     HAQPISFSFYILSYAFMFMRDIKRLQNSLELADFSPLGSCACAGTSYATNRNLSAQIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSASEFGFLTISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSV
                     KTAKDSLIILNAMLKEVKINEENMLKSCKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEKQGIDISDIEDLSKIDPIFDEKAMKLLDFENSLNSKQSEGSSSVASVEKQI
                     QILEKFLECLG"
     gene            complement(10643..12217)
                     /gene="pckA"
                     /locus_tag="ACJE1S_000552"
     CDS             complement(10643..12217)
                     /gene="pckA"
                     /locus_tag="ACJE1S_000552"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HGG0806122.1"
                     /translation="MKKFENLGLENIKKVYHNLSFDELYEHEKKNEEGQCTDNGTFTV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQAITKELFDELLMKARKELSNKEIYVQ
                     DVFCGASLKSRKAIRFVTEIAWQAHFVKNMFIRPNDKELDEFKADFIVYNACKCVNKD
                     YEKNGLNSEVFVIFNIEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKGDVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     SEPEIYGAIKRNALLENVVLRSDKSVDYSDASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIDKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITQCEFENFDVFNLAIPKTLAGVESSLLNPINTWKDKDEFIATRNKLAKMFSDNFKRY
                     EDVKEGVEYSQFGPKI"
     gene            complement(12226..14019)
                     /locus_tag="ACJE1S_000553"
     CDS             complement(12226..14019)
                     /locus_tag="ACJE1S_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HGG0806123.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMQDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFEMMDKFRSIVGKDANLQTLARGVNTVTLDTGSKELID
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIKKYGLKHEITITLMDLPPNCQGAHD
                     VSFYERILKEILAAEIPFDSICFKDASGTSNPNKIYETIKMARKNLPQDVHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKNYDLGGLEEEKI
                     LKYEAVLKDSLKEYFLPPEATMVSPLIPFSPMPGGALTANTQMMRDNNILDKFPEVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWEKIAEGYGKMVLGYFGKTPVEPD
                     AEVKKLAAKQLNLEPTTELAIDIADKDETKSIAYVKSLLEKEGIAVSEENIFIAAACK
                     EKGIAYLKGKAKVNVRKNVSAPKQNSTGIDENKFTVSVNGNKYHVEISAGFDKDVNIK
                     SIHKADTQEDIMQDADSSEGIQAGISGNVFKIYINEGEEVKSGQVVMILEAMKMEIEV
                     SAPKDGIIEKICVKTGDSVSENNLVAIYKNN"
     gene            complement(14042..15391)
                     /locus_tag="ACJE1S_000554"
     CDS             complement(14042..15391)
                     /locus_tag="ACJE1S_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG0806124.1"
                     /translation="MRTYFSKIGFILAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLSIGFSIFLAEVSMGRLSRSDLANAYYTLAKSHARRWRYGGIFTLGGIFVLSFYL
                     VIMGWVLKYALTSLYYLPKNLEQAGSDFSTLISADLSNSILFFSLSFFLTLLIVSKGL
                     IKGIERLNVVIMPSLFIMLIFMLLYCMSFQNGFKQAFSYLFYPDFSNFKLSSIAEALG
                     LAFFTLCLGIGCIVTYSAALSKKINFIKSSIFIVLINLLISFIMGLIVFTFIFEFEAN
                     PNIQGPGIVFVSLMSLFNELGILGYVLAFCFFLALFFAGITSAVSMIEPLTFYVVNNY
                     KISRIKALSFIGFIVFVLGICCILSLNTHFSSLFSIFGKDFFTLLDKVTSNILLPLGA
                     IVSSIFVGFFVDKKRIYKIFSKFVNRQIFTIWLFFIRFISPIAIICIMCYQIFVKIS"
     gene            complement(15405..16739)
                     /locus_tag="ACJE1S_000555"
     CDS             complement(15405..16739)
                     /locus_tag="ACJE1S_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG0806125.1"
                     /translation="MNSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYAGFTMIGAILIVSFYT
                     LVIGWILKYAYLSISGNLYPDLNTSSAEFGKLISSDFVSQFVCFTLIFLIVFYTVSKG
                     VKNGIEKLNVWMMPALFILLVLMLIYAMTKDGFMMAVEFLFVPDFSKISTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPERTNFITSTLNIIFINLLIGLLMGLVVFTFIFEFGFD
                     ASKEGPGLIFVSLATLFQKLGAIGHILGAAFFISLIFAGITSAVSMIEPFAFYLINSF
                     GMSRKKALILIGIIVYTLGILCILSSLDSTAFKIFGLSVFDLLDTLSSKIIMPLGGIL
                     AAIFVGFVIKKEALQILFGPYMKGIFFELWYIFLRFISPLAVIVVMISAFLK"
     gene            16985..17323
                     /locus_tag="ACJE1S_000556"
     CDS             16985..17323
                     /locus_tag="ACJE1S_000556"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HGG0806126.1"
                     /translation="MKKIFFLFLALAATAFAAEANAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVFA"
     gene            17380..17465
                     /locus_tag="ACJE1S_000557"
     tRNA            17380..17465
                     /locus_tag="ACJE1S_000557"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17414..17416,aa:Leu,seq:gag)
     gene            17664..18863
                     /locus_tag="ACJE1S_000558"
     CDS             17664..18863
                     /locus_tag="ACJE1S_000558"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG0806127.1"
                     /translation="MLNDTKIKALKAKDKKYYIADFDNLLLCIYPSGKKTFIFNYKCP
                     KTLRYKRITLGEYPTLNLANARKQRDNLKVNLAENDSIREKYEITFKELALEKMDLKK
                     LELSEKTYKSYMSYLQRFAFGIYGEIILDKLQIKDILKSFEKFRKENIREGADKFFTL
                     LNEIFRHGVIKEYIKSNPMANLNRKELLINKASKNHATLLETKEIKALVDNIIDYKGY
                     ISVKIAAMFSLLTAQRSFSIRSAKWEDIDLENGIWYIPQEDMKMKRAHTIPLNSQCVY
                     MLKKYKEMSINTGYLFYSLRSKSEIISDNTIRSMFRRMGYSNDDFTPHGFRAMFSTLA
                     HENRNKHQMSSDIIELCLAHVEKNKIKSAYNHALNLKEKAILMQWWGDYLDEIADLNQ
                     QVRNIFL"
     gene            complement(18790..19029)
                     /locus_tag="ACJE1S_000559"
     CDS             complement(18790..19029)
                     /locus_tag="ACJE1S_000559"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG0806128.1"
                     /translation="MIRLDIGDYYTRKEVANLLKVKEPIVHKYAKQGKFREFKQHRNC
                     SGLYPKQDIENFIKKYFGLVDLDQQSHRDNLPTTA"
     gene            complement(19031..19564)
                     /locus_tag="ACJE1S_000560"
     CDS             complement(19031..19564)
                     /locus_tag="ACJE1S_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HGG0806129.1"
                     /translation="MGILKRLDETIIIENDRKSEKELVEYCILEGISLNDANLENLNL
                     SGLDFDNVFINGTSFKNANLNDISSKNTSFIDCDFSGASFYFCNFLRTEFENCIFENV
                     SLRDCIGDMKNIFSIVVDTYVVTFTKTMMNLGCNTKTIKEWRNLSVDDLEDEEQKWLW
                     NYYKDTIFEIIDKRLGV"
     gene            complement(19566..20237)
                     /locus_tag="ACJE1S_000561"
     CDS             complement(19566..20237)
                     /locus_tag="ACJE1S_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806130.1"
                     /translation="MQKNITSNLIFTNEQVAINYGLTTGLTIAKHLRMHNDEFIENTH
                     YFLVENSFKNKTIKWTLEGVYMLGFFIKSPKAKEYRKKVAKLLREQTQARFKTLSDEN
                     QRLNSLNHHQKIGYKSQLAQQKEKYENKIKALQYDLEHKKELSFKRKLSKEELLELRK
                     ILARDYDILCFKEWEFEFLAEKIALESSKMTTWDAVVKKLKQSLDYWQNYEEYEEKWR
                     KILRR"
     gene            complement(20384..20560)
                     /locus_tag="ACJE1S_000562"
     CDS             complement(20384..20560)
                     /locus_tag="ACJE1S_000562"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806131.1"
                     /translation="MLELIFNTGRNIGLGIFVNGAFALQFSDVPQSQATYAIAEGILI
                     MFLSGLGEIKSKRS"
     gene            complement(20658..21035)
                     /locus_tag="ACJE1S_000563"
     CDS             complement(20658..21035)
                     /locus_tag="ACJE1S_000563"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806132.1"
                     /translation="MSENIELFESYTAKTLGELYSTFPIPSDFNFFDFIPKLEYEEFL
                     THQLNAYHTINYLKNNHFLDFESMDLESGKVKKAILKPKALELLKQDGLGVQLRKALS
                     TGRDELIRSIVNRALEMSLKFMF"
     gene            complement(21032..21265)
                     /locus_tag="ACJE1S_000564"
     CDS             complement(21032..21265)
                     /locus_tag="ACJE1S_000564"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806133.1"
                     /translation="MQEETITYARGRLTELKDKKDELQRLIKDSKNLAIKNIQNDDLK
                     GARLYIDKLELYFDELLKTNTDLNLLCNKWGFK"
     gene            complement(21275..21568)
                     /locus_tag="ACJE1S_000565"
     CDS             complement(21275..21568)
                     /locus_tag="ACJE1S_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806134.1"
                     /translation="MENFKAFKLISKRIIKTLLNDFPNQSILFSDDFNKDCKEYKIDF
                     SSCIHFLKECKVLKYDKENNGDFSGVLISPKAYLYFSKNDLNDIDDLIEFCMR"
     gene            complement(21599..22351)
                     /locus_tag="ACJE1S_000566"
     CDS             complement(21599..22351)
                     /locus_tag="ACJE1S_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG0806135.1"
                     /translation="MKPNLYNDHFQNFKRYNIPKAQLVIADIPYNLDNNAYASSPEWY
                     INGDNKNGKSKKANKAFFDTDNDFRVSEFMHFCSKMLIKEPKECGKSPCMIVFCSFEQ
                     QAMLIEVAKKYGFNHYINLVFRKQSSSQVLKANMKIVGNCEYALILYREKLPKFNNDG
                     KMIYNCMDWQKDEGIPKVHPTQKPVKLLERLITIFTDVGDVVIDPCAGSGSTLLAATN
                     LNRKAYGFEIKKDFFKSANEIMFKHIERSLFA"
     gene            complement(22332..22610)
                     /locus_tag="ACJE1S_000567"
     CDS             complement(22332..22610)
                     /locus_tag="ACJE1S_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806136.1"
                     /translation="MEVCRSNYLEIVKIVPFSERRSCFCHFLRSNGIAIEKINYKNHI
                     SKKELRKAYKIYKSKPSGRNYFHEKKLIVKAFEDVEKFLRGKNETKFI"
     gene            complement(22591..23286)
                     /locus_tag="ACJE1S_000568"
     CDS             complement(22591..23286)
                     /locus_tag="ACJE1S_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806137.1"
                     /translation="MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDG
                     SNNTFICFEFLTRKEQKLAIFNLFVAKNNDFSYINKNGEKENYLGFRQLNAIMKFFGI
                     DELAFNEKGNENVFGVQTEVIYLNSLVNKLLVLGFGTEEYLSKNGELANKIFLDRIFN
                     EKMQSMDEFQNNKEPLSIKSFKARHKSLNNDNNKSFIPKENQSYNPYGNEVKNNNNEK
                     YIEIGDDDGSLPF"
     gene            complement(23286..24218)
                     /locus_tag="ACJE1S_000569"
     CDS             complement(23286..24218)
                     /locus_tag="ACJE1S_000569"
                     /inference="COORDINATES: protein motif:HMM:NF015776.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HGG0806138.1"
                     /translation="MSSEITEIVDMGKKSTQIKEFEERNPLVISERLENELKLINERF
                     NSEDNAVMKVLKDNQTASFLKVKNLSEAGLSILNNDYYIVPMGNNVNIEPSYMGLVKV
                     AINEALKRGFEIIVKSDTVSNSDEVKIITENEIDNLSISKNPLDNSIKGAYALISIVK
                     NGNLLYRKAEFLNKEQIDTIKSKTFSKEGKVYKEFPEEMARKSAIRRAIKHINYFIKS
                     DVLDGVISIDNENYNFSNSNLKAIDDKKEQINNSLKELQELKAQYDAFIKENGISKKE
                     SEEFIIKYNIFTKEKFQSVLANKEKAIKTIKGEL"
     gene            complement(24220..25074)
                     /locus_tag="ACJE1S_000570"
     CDS             complement(24220..25074)
                     /locus_tag="ACJE1S_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lambda-exonuclease family protein"
                     /protein_id="HGG0806139.1"
                     /translation="MQYKIIDLEQGSVEWLNFRKGKIGASMVASCVGIKGAFNSKEEA
                     RDIILGLKEVYQNKAMRRGNEYEPLIRARVEFLHSVSITPVVLQSLENEMFIASLDGI
                     DENGIIYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE
                     CEVLRDEAYQEWLVKSVKQFILDYIINQKSDYKDLDDNHAKELTIEIIRLENTIKPIK
                     EKLESLKKELIALANGEKARCLDITIYPQIRTTIDYKGFLEQQNINVPKEFYKESTSM
                     CLKIKKGA"
     gene            complement(25064..25807)
                     /locus_tag="ACJE1S_000571"
     CDS             complement(25064..25807)
                     /locus_tag="ACJE1S_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HGG0806140.1"
                     /translation="MNLELFRKDENKEISLTSLEIAELTGKEHRNVTRDIETYLEKVV
                     EGGVFKFEHTYQNPQNKQFYKCYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKK
                     QSYKPLSLKESLQMQLELLERNEKLQIENLNLKNEAKENAPLIHFANRIKDTNDAILI
                     RDFAKILYEKNKIEIGEKRLFAFLRDNGFLMSDNKPYQKCIEQGLFKVSETTISTING
                     DRLVSTTKITGKGQIKIANLLLEGINHAV"
     gene            complement(25804..25986)
                     /locus_tag="ACJE1S_000572"
     CDS             complement(25804..25986)
                     /locus_tag="ACJE1S_000572"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806141.1"
                     /translation="MNQEEKFLECLTKATKGKKDLTNLEVLEFAFSIFCCLDNYIQNN
                     KARDKKILKLLKGDEK"
     gene            26129..26326
                     /locus_tag="ACJE1S_000573"
     CDS             26129..26326
                     /locus_tag="ACJE1S_000573"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806142.1"
                     /translation="MEEKQKTNKSEIISIRLDTVTKNKLAYICELEYRPMALQIRKII
                     EDYINTYESENSLWQKGDYPN"
     gene            complement(26319..26471)
                     /locus_tag="ACJE1S_000574"
     CDS             complement(26319..26471)
                     /locus_tag="ACJE1S_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806143.1"
                     /translation="MKRQTKPLSIRIPLELKEELQKIADKEYRPLATQIVKILSDYVK
                     NKNKTN"
     gene            complement(26468..26722)
                     /locus_tag="ACJE1S_000575"
     CDS             complement(26468..26722)
                     /locus_tag="ACJE1S_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806144.1"
                     /translation="MFLNSKKNEKIRYLEKEIQRLKGVIALKDTAINEISLKLEEEIE
                     INVKLSNFRIKILDALGLIGVFKNDDKAIKEVKRLKDKEL"
     gene            complement(26713..26982)
                     /locus_tag="ACJE1S_000576"
     CDS             complement(26713..26982)
                     /locus_tag="ACJE1S_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806145.1"
                     /translation="MKAYHTKEQVIIKLSKDEYRKEMKLNKSLKDENKSLKDEISNLE
                     NEKIELLKELKDQIEANMKNIKEISSLQNKIYELLYAKERSKLCS"
     gene            complement(27219..27389)
                     /locus_tag="ACJE1S_000577"
     CDS             complement(27219..27389)
                     /locus_tag="ACJE1S_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806146.1"
                     /translation="MPRLADLLGFIKNKNKFDKITLFKWLISLGGEGAVFDDREVFKN
                     CFFIVRNSKKVD"
     gene            complement(27874..28146)
                     /locus_tag="ACJE1S_000578"
     CDS             complement(27874..28146)
                     /locus_tag="ACJE1S_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806147.1"
                     /translation="MSFTDLYFDREEKRISNYARELVKDELESRENFADIFNSLQEFK
                     NILEVSLEDDEDIAASLQAYGDEFINDTYDLLEKVRKFEKKYEKLY"
     gene            28199..28348
                     /locus_tag="ACJE1S_000579"
     CDS             28199..28348
                     /locus_tag="ACJE1S_000579"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806148.1"
                     /translation="MDEIQSLKAQLNNLLLRVSELESKVATLEKRLNDKDFQVLNETP
                     NLLEK"
     gene            complement(28329..>28538)
                     /locus_tag="ACJE1S_000580"
     CDS             complement(28329..>28538)
                     /locus_tag="ACJE1S_000580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806149.1"
                     /translation="NKKDEKMLEVKLDLRPDIKKMLEIAFERNYSKSYASLEEFLANV
                     LHNAVKNLITKEAFENKGFVISLKD"
BASE COUNT         9732 a         4831 c         3813 g        10162 t
ORIGIN      
        1 gtaaattcca ttctctttta attaaaatac atattttcta agaaacataa gcggtttttt
       61 tagcataata tcttacaagc atggataatg aaaagcatat agcaaaataa atcacagcaa
      121 caaaacctat agtagctaaa atttcatcaa aactcgtaag tctagccaaa atatttttag
      181 aattataagt cagttctgct atttgtaaac ccgccaaata ggccgtatct tttacagtgg
      241 taacaatttg agaaagcaaa gacggaacaa cctttctaaa agtttgaggt aaaataatat
      301 aaaaaagagt aaaaaattta ctaaatcctt gagaataagc tgcttcaaat tgtccttttg
      361 gaatagaatt taaaccacca cgtataatct cagccataac tgaacttgtg tatagcgaaa
      421 atcctatagt tccccaaaaa gcttgtggca tttgtggaaa aaatgatggc aaaacaaaac
      481 aagcagcaag catccataaa agcaatggag tatttctaaa tatatcaatg taacaagttg
      541 ctaataacct gctgaatcta tctccataat ttttagtaat agctaaaaaa gttccaaaaa
      601 tgatagatat aatacaagtc gccaaggcaa ttttaagggt aaggactaga ccttgcatta
      661 aaaattcaat attttgagca ttaaaaacat tttccatacc aaacccctta tcttgttaaa
      721 tgagctttct taagcttgtc ttcgtaaact tttgcaaaat atgccaaagg ataacaaatg
      781 ataaaatata aaatcgccgc aaaaatatat gcaggtgcgt aatttccata gtcagcagca
      841 taactatctg cagaatgcat aagctctgct ccacctataa tcaataatac agaagtattt
      901 ttaatcaaat ttaccatttg atttgtcata ggcggcagga taatttttat agtttgtgga
      961 actataatat aacgcatttg ctgtacatag gtaaaacctt gagaggctga agcttcgaat
     1021 tgtcccctag gaacagataa aattccactt ctaactacct cacttacata agcaccatga
     1081 taagcaccta tacccaaaac accgatggta aaaatatcaa gatgaattcc taagccaggc
     1141 aaagcaaaat ataaaaagaa aatttgtatt accaagggaa tattttgaaa aagctcaaca
     1201 tacactcgag tgtaggctct taggatttta attttacttg tggccatcac accacctata
     1261 gttccaaaaa caatcgctat aagtaatgca agaatgctca cttctaaagt ataaataaaa
     1321 ccgctaataa aagcatctcc attgtccaaa gcgtctagaa atttccaaat tgcaaaagga
     1381 tttgtactac tttcatcata caaaccccaa gaactaagga gttgccttaa tttatccaca
     1441 aagcctacac tctcattcat tttataaacc ccatttttta gctaaagcgt cgatttcagt
     1501 tttgttttgt tttacaaaat cattgacata atttgaaaaa tttgcatcat ctttttttgt
     1561 aactatgcca taactttgag gatcgaaact atcaggtaaa atttcattat tctcatcttt
     1621 ataacctagt aaaatagatt tatcaactga aaacgcatca attctttttg catctaaagc
     1681 tgcttttatg ctaggataat caggaaattc gctgaatttt actttaacac ctattttttt
     1741 agccgcagta ttgataactt ttttagtagt tgctgcttga gctaccccta tagtagcacc
     1801 attcatatct gctaaagatt tataattttt ctcttttaaa actaaaagcc ctacagcatc
     1861 ttgataatac ggctctgaaa aattatacac tctttttctc tctggagtga tagtaaaagt
     1921 tgctataacc gcatcaacgc taccattatc aagtaatgga cctcttgttt tagcatttac
     1981 tgctataagt ttaactttat tttcatctcc taaaatactc ttagcaagca ttttagcaac
     2041 atcaacttca aagcctttaa tttcgcctgt agcttgatca agtaaagcat agtgtggtac
     2101 atcatttttt acacctataa ccaactctcc tttagccttg atagcttcaa gttttccttc
     2161 agctgcattt gcactagtaa aagccataca agctcctaaa gcaagtgctg ctaattttaa
     2221 taaagaattt ctaaaaacca ttgttctctc cttttaaaat ttggtttaat ttttaagaat
     2281 ttttcctaaa aagagtcttg ctctttcagt tttaggattg gaaaaaaact cactaggaac
     2341 attttcttcc acaatagcac catcttccat gaaaataatt ctatcggcaa cttctttagc
     2401 aaaacccatt tcatgagtta ccacaaccat agttgtattt ctttgtgtag aaatttcttt
     2461 cattacatct aaaacttctt gtatagtctc aggatcaagt gctgaagtag gttcatcaaa
     2521 caagatataa ggttttttag tacatagcgc tcttgcgata gcaacacgtt gttgctgacc
     2581 acctgaaagc gtggctggat aaacatttgc cttgtctaca agtccaacca ccttaagata
     2641 ttgataggct gtttcttcgg cttcttggcg taattttttt tgaagtttca taggagctaa
     2701 agttaaattt tgcaaaacag tcatatgagg ataaagattg aaatgttgaa aaaccatagc
     2761 acaatatttc ctacaaattt caatcttatt tttatgattt aaaacaagat tatttacaac
     2821 aacttcaccc gaactcacct cttcaagtcc attcatgcag cgaatagtag tactttttcc
     2881 acttccgcta gggcctatga taacaagttt ttcaccttct ttgacacaaa ggttaatatt
     2941 tttaagaaca tgatgggttc cataatattt atttacattt cttaactcta tcaaaatctt
     3001 tccttttttg attaaactta aaaattaata ataacaaggg tttattatat tgacaatatt
     3061 atagcaccaa aatcaaaatt taagctaaaa atagtaactt tattttagcg aagatataaa
     3121 aaagtgtaac tttttgtaaa atttaagaaa atataatcaa attttttcat agtacacacc
     3181 tcgaggtgaa aaaactttct taaaaaatgt ggtttcagga atcaaatcgg cattgcccac
     3241 atacaaccta ccgttatcag ctaaaatttg ataaaaacgc tccattaatt taattctaga
     3301 atcatagtca aaataaatca tcatgttcct agagacaata atatcaaatt tacccagtct
     3361 taaaaattta tcttcaaaaa cattacataa ttcaaatcta catgtgcaaa gctcgctttt
     3421 attaatgcta aatgtttgct ctccaatatc tgtgaaaaat cttctttttt cactttcgct
     3481 taaacgctgt aaagttctac cttgatattt acccaccttt gctttttcga tgacatttga
     3541 atttatatca attcctaaga tcatcatatc cttaaggaaa ttttgagctc ccaaaatcgc
     3601 catagaatac acctcttcgc cactagaaca aggagcactt aaaatattta ctgttttttc
     3661 aagactttta gcataaaaaa taatttcttt taattgcgac aattctctta aaaagtatgt
     3721 ttcccctata gtaacaaaat ctaaagtatc ttgtctaagc tgtctattta tttgaagttt
     3781 gcttaaaaat tcagcaaagg tttttacacc cgtacttgaa acaaattttg ataattttaa
     3841 aactaaaata tttctttttt catttaaatc tataccgctg atttcattaa taatcttaat
     3901 aaattcatta agctctaatt cgctaggatt aattttttct tccataaatt taaaccctca
     3961 ttcttcattt ataaaattta aaatttcttg tttaatttct tttaaactca taggccttag
     4021 ttttggattt atatcttttg ctttttttgg cataccatat acaatactat cagcctcatt
     4081 ttcacacaaa catttaactc ctactttata caattcaaac aatcccttag ccccatcatc
     4141 tcccatgcct gttagtatta cagctaaaat tttgtttgtc tttaccaaag gtacagctga
     4201 gtgaaacaac aaatctacat ttggtttaaa gcttgtgaca acttctttcc agtttgccat
     4261 aagatttaaa tttcctgata aaatagtatt tttttgacaa atataaattt tatttgccaa
     4321 aacctctttg tcgtttaaaa gacttacttc gcttaaggct tctttattaa actgatttac
     4381 aaaagaaggt ataaaacttg cactcatatg ttgagctata actacgcaag tattttttat
     4441 atccacatct tttaataaaa acttcagctg attagggcct ccggtagatg atcctatcaa
     4501 taggagtttc atttaatttt ccttctattt gttaaaatgg attaaaattc ttaaaatgta
     4561 tattgtaaca tatatacaaa aaataaagct tagttttaaa tttattttga aaacaaaaag
     4621 ctttttttat gatttgttat gttaatatag atgctttaat ttttaaattt tggatttttt
     4681 atgcttagaa aaaaaattta tattgctagc gatcatgcgg gttttatgct taaagaaaaa
     4741 atttgtacct ttcttaaaga aaagcaaatt ccttttgatg atcttgggac aaatgatcct
     4801 actagttgtg attatccaga ttatgcacat ttgttagctt ctaaaataga tgaacaaagc
     4861 tttggaattt taatttgtgg ttcagggata ggaatttcca tcgctgctaa tcgtcataaa
     4921 aacattcgct gtgccttatg taatgaaagc cttagtgcta aacttgctag aaaacacaat
     4981 gatgcaaatg ttttagcttt tggaggtaga ttaataggca ttgatgcagc tatcgatatg
     5041 atagaaaatt ttattcaaac cccttttgat caaggtagac atgtaaaaag aattcaaaaa
     5101 attgaggtag attgttaatg tttgcaaatt ggtttatttt aactgcactt atttgtgcta
     5161 ctatttatct agttgttatg ttgttttatt ataaaaccct gcttaataaa gaaaaaactt
     5221 caaaagattt tataaaaaac aatcttgatg atactgaaat agtcattaga aaactacaaa
     5281 ttcaacttca acgcagtctt gggaatatcg atattttaac cgaagagctc aataaaataa
     5341 aagcggattt aacttctcta agaacaagaa attctcaata ccgtttagaa aatgataaac
     5401 taagacaaag aattaaagag ctagaagcaa aaatcgaggc attattatga caaaacttac
     5461 acaaaacgaa cagcaatttt tatcagaaag catacgcgtt attccaaatt ttccaaaaga
     5521 aggtattatc tttcgagata ttacaactct acttaacaat caaaaagcct tatctttttt
     5581 actggatcat ttaagtaagc gttatcaaac tatgaattta gattttatag caggaactga
     5641 aagcagaggt tttatttttg cggcaatgat ttgtgctaag ctaaatttac cttttgttcc
     5701 tatacgcaaa cccaataaac ttccatcaaa tacctattct tgcgagtatg aacttgagta
     5761 tgggacagat agagtagaaa ttcatcaaga tgcatttaga aatataaaaa atgcaaaaat
     5821 tttgcttgta gatgatctta tagctacagg tgggacagca cttgcctctt ttgagcttat
     5881 taaaaaagca ggaggagaat gtatcgaggc ttgtttttta atgaatttga aaaacttagg
     5941 cggtgaagaa aaattacaaa agcattgttc tgtatatagt gttttagaat tttaggaggg
     6001 tgcgatgaga aaatggttta aattttttat ctttatcgtt ttaattgctc taataattta
     6061 tgtgattcat ggtttggtta aaaatgattt ctccttggaa gaatttatta taagaatttg
     6121 gaatgaacat gttgaaactt ggggctactt gatacttttt tgctggagta ttttagaggg
     6181 tgagcttgga cttatttttg ctggacttgc agcccatgat ggaaaaatgc atgtagtatt
     6241 agctatattt atagctggct tgggtggctt tgttggggat caaatttatt tttatatagg
     6301 aagatataac aaacgctata ttcaaaagaa actccgttcg caaaggcgta aattcgccgt
     6361 agcgcactta cttttacagc gttttggttg gcctattatt tttatacaac gctatatgta
     6421 tggttttaga actgtaatcc ctatgagcat aggtattacg cgttatagtg ctaaaaaatt
     6481 tgccattatc aatcttctta gcgcttgggt ttgggctgct attaccatac ttttagcttg
     6541 gcattttggt aatttaatcc agaatttttt aacctgggct aaaaatcatt ggtatttagc
     6601 tgctattatg ataatatgtt ttttatcttt acttgttttc acctttaaac aaattgaaaa
     6661 agctatactt aaagaaaaaa ggaaaaaaaa tgatatttga attaagtgat aaaaaaattc
     6721 atggtataaa agcagatttt gaacttgttt ttatacaaga taaaaatcta aaaccattca
     6781 caaatgaaaa agattttttt aaattaaata actatacagg cgagggaatt ttactcgatt
     6841 taaacaataa aagattattt atagaactta aaagtttaaa ttatgaggat ataagattag
     6901 cactttacac tgcttataaa aatttagaaa aattaaacat taaaagcgta aaacttccta
     6961 gcatattagg tgattgcgtt gtgagaagtt ttacttcttt ggttgaaggt gtgctttttg
     7021 gagcttataa ttttgataaa tacaaaagcg aaaaaaaaga aagcacttta gaaaaattta
     7081 taatttctgc cgaagaacta aatgctaaaa aatttaatct cgatgaagca aaaataggtc
     7141 ttttacgcgg tgaaattcta gccaatgcga caaattttgc caaagatata gttaatgaaa
     7201 ttcctgaaat ttatactcct ttaaaaatgg cggaagatgc tcaaaattta gctaaaaaaa
     7261 ataaaaatat cacatgcaaa atttgcgatg aaaaatttct tgctaaagaa aaaatgaatg
     7321 cattcttagc tgtcaatcgt gcttctgctc atccgccgcg tctgatccac cttagctata
     7381 aagctaaaaa tgctaaaaag cgtatagtat ttgtaggcaa aggcttaact tacgatagtg
     7441 gtggcttgag cctaaaacct gctgattata tgcttactat gaaagcggat aaaagcggag
     7501 ctgcagctgc gatgggaatt attaaagcgg ttgccgagct cgctttagaa ttagaagtac
     7561 attgtatctt aggtgcaact gaaaatatga taggtggaaa cgcttataaa ccagatgatg
     7621 ttttaatttc gcgcgaaggc gtgagtatag aagtaagaaa taccgatgct gaagggcgtt
     7681 tggttttagc tgattgttta tcttatgctc aggatttaaa acctgattta ctcattgata
     7741 tggcgactct tacaggagct tgcgttgtgg ggcttgggga atttacaagt ggtattatgg
     7801 gaaataatga agaattgcaa aatgaatttt atttaagctc taaaaaaagt ggagaatata
     7861 caaccatact acactttaac ccgcatttaa aagaacttat aaagtcaaat attgctgatg
     7921 ttagtaattc tgcttctagt cgttatggtg gtgcaattac agctgggttg tttttagata
     7981 aattcatacg caaagaatat aaagataaat ggctccacct tgacatagca ggacctgctt
     8041 atatagaaaa atcttggggc tataatagct ttggtgcggg tggaacagga gttagaatgt
     8101 gtgttaattt tttaattcat cttttaagga aaaataaatg agtttaagcg tcggtatagt
     8161 aggtcttcca aatgttggaa aatcaactac ttttaatgcc ttaaccaagg cacaaaatgc
     8221 acaaagtgca aattatccct tttgtaccat agaacctaat aaggctatgg ttgaagttcc
     8281 tgatctaaga ttaaatgaac ttgccaaaat tgtaaaacct gaaagaatta tgcattcatt
     8341 gatagaattt gtagatattg cagggcttgt aaaaggtgcg agcaagggcg agggattggg
     8401 aaataagttt ctctccaata tacgtgaaac agaagtaatt ttacacattg tgcgatgttt
     8461 tgatgaagaa aacatcaccc atgttgaagg aggcgttgat cctttaaggg atgttgagat
     8521 cattaataca gagcttattt tagcagatat agaacagctt ggtaaaaaaa tagaaaaact
     8581 caataaagaa gctagagcaa ataccaaagg tgcaaaagaa agtctagaaa tggcaaattc
     8641 tttgcttgaa catttaaata aaggtcttcc agctagcacc tatttgcaaa aagaagatga
     8701 gatttttcaa gctttaaata aagagctaag acttctttct gccaaagaag tgatttatgg
     8761 ggcaaatgtt gatgaaaatg gtattagcga agataacgag tatgtaaaaa ttttaaaaga
     8821 ctatgctaat aagaacaatc acgaagttat caagctttgt gctaagatag aagaagaatt
     8881 agttggctta agtaatgagg aaagtgctga atttctaagc tctttaggtg taaatgaaag
     8941 tgggcttgat caaatcatac gcactgcttt ttctaaactt ggactcataa gctattttac
     9001 agcaggagtt ttagaagtgc gttcttggac tattaaaaaa ggctggaaag ctccaaaagc
     9061 tgctagcgtg attcataatg attttgaaaa aggttttatc aaagcagaag tgatttctta
     9121 tgaagatttt atcacctaca aaggagaaaa tggcgctaaa gaggcgggaa aattgcgtct
     9181 tgaaggaaaa gattatatcg tcttagatgg cgatgtgatg cactttagat ttaatgttta
     9241 ggcaaaatta gcctaaacat tcaagaaatt tttctaaaat ttgaatttgt ttttctacac
     9301 tagcaactga gcttgaacct tcactttgtt tagaatttaa agaattttca aaatcaagca
     9361 atttcatcgc tttttcatca aagataggat ctatttttga aagatcttcg atatcactta
     9421 tatcaatccc ttgtttttca gcttgtgcga ccacattacc gactataaaa tgcgcttttc
     9481 taaaaggaat atttttttct cgcactaaat aatctgccaa atctgtagcc aacaaatgcc
     9541 cttttttgca agattttaac atattttctt cattgatttt tacttctttt aacatagcat
     9601 ttaaaataat caaactatct tttgctgttt taacactatc aaaaagtcct tctttatctt
     9661 cttgcatgtc tttattgtaa gctaaaggaa gtgccttcat aatcgttaaa agagaaatca
     9721 aatttccata aacacgccct gtttttccgc gtataagttc gcaaacatcg ggattttttt
     9781 tctgtggcat gatagaactt cctgttgaaa aactatcgct tatggttaaa aatccaaatt
     9841 ctgaagcaga aaataaaatc atctcttcgc aaagtcttga agtgtgtgta aaaatcactg
     9901 ctatatcata aagtaaatca agcgcaaaat ccctatcact cactccatcc atggcatttg
     9961 gcataatgtc tttaaagcct aaaatttgag cgctaagatt gcgatttgtt gcatagctag
    10021 ttcccgcaca agcacaagaa cctagcgggg aaaaatccgc aagctctaaa ctattttgca
    10081 aacgcttgat atcacgcata aacataaaag catagcttaa gatataaaaa gaaaaactta
    10141 taggttgtgc atgttgcaaa tgcgtaaagc ttggcataat agttctttta tgcgctctag
    10201 catgagaaag tagagtttgg ataagttctt ttaaaagcat tataagttct aaatgggact
    10261 ttttggtaaa taatttaaaa tcagttgcaa cctgatcatt gcgactgcga gctgtgtgaa
    10321 gtcttccgcc tatttcactt cctataagct cacttaaacg cttttctata gccatatgaa
    10381 tgtcttcatc ttctatattg aaaacaaagc gattttgctc tatctcgact ctaacctgct
    10441 ctaaaccttt tacaatagcc tctagctcat ctttttttaa gattccgcaa ttttcaagca
    10501 tagtagcatg agcaatagaa ccctgtatgt cttccacata caaagctcta tctatattta
    10561 aacttgcatt aaattctttt aagagttcgt tacttgcttc gctaaagcgt cctgaccaca
    10621 tctcattttt catcaatgcg ccttaaattt taggtccaaa ctgactgtat tctacaccct
    10681 ctttgacatc ttcatagcgt ttgaaattat cgctgaacat ttttgctaat ttatttctag
    10741 tggcgataaa ttcatcctta tctttccaag tattgatagg atttaaaaga gagctttcca
    10801 caccagctaa agttttagga atagctaaat taaatacatc aaaattttca aattcacact
    10861 gtgtaatact tccatctaaa atagcattaa tgcaagctct agtagccttt atactcattc
    10921 ttttgcccac gccatagctt ccaccgctcc agcctgtatt aacaagataa acatttactt
    10981 catgtttgtc aattttttct ccaagcaatc ttgcataaac tgttggatgc aaaggcataa
    11041 aaggctcgcc aaagcaagct gaaaaagtag cttgaggctc tgtaatccct ctttctgttc
    11101 cagctacttt tgctgtataa ccacttaaaa aataatacat agcctgctct ttgctaagtt
    11161 tgcttacagg aggtaaaatt ccaaaagcat ctgcacttag aaaaataata ttttttggat
    11221 gacctgcttt taagcttggt tcatgatttt ctatatgttc tataggataa gaaactctag
    11281 tattttcagt ctttgaagca tcgctataat ctacgctctt atcacttctt aaaaccacat
    11341 tttccaaaag tgcatttctc ttaatcgctc cataaatttc aggttcactc tcaggatcaa
    11401 gattgatagt ttttgcataa catccaccct cgaagttaaa cactccttca tcatcccatc
    11461 catgctcgtc atcgcctata agctttcttt ttggatcggt agaaagagtt gtttttccag
    11521 tgccactcag gccaaagaaa agtgcaacat cgcctttttc accaacattt gcactacaat
    11581 gcatagaaag cttattttca agaggtagcc aataattcat catggaaaaa attccttttt
    11641 tcatctcgcc gccataccaa gttccgccaa taactgcaat attttcttct atgttaaaaa
    11701 tcacaaaaac ttcagaattt aaaccattct tttcatagtc tttattgaca catttgcatg
    11761 cattataaac gataaaatcg gctttaaatt catcaagctc tttatcatta ggacgaatga
    11821 acatattttt tacaaaatgt gcttgccatg caatttcagt tacaaatctt atagccttac
    11881 gacttttcaa agaagcgccg caaaaaacat cttgcacata aatttcttta ttgcttaatt
    11941 cttttctagc cttcattaaa agctcatcaa aaagttcttt agtgattgct tgattgactt
    12001 taccccaagc tatatacttg ctagaaggat cttgttttac aaaatattta tcctttggac
    12061 ttcttcctgt aaaaattccc gtatctacag taaaagttcc attatccgtg cattgcccct
    12121 cttcattctt tttctcatgt tcatagagtt catcaaaact taaattatga taaacttttt
    12181 ttatattttc caaacctaaa ttttcaaatt tcttcattta aaacctcaat tatttttata
    12241 tattgcgact aaattatttt cgctaacact atcacccgtc ttgacacaaa ttttttctat
    12301 tatgccatct tttggtgcac taacctctat ctccattttc atagcttcta aaatcataac
    12361 aacttgaccc gattttacct cttcaccttc attaatataa attttaaata cattacccga
    12421 aattccagct tgtatacctt cgcttgaatc cgcatcttgc attatatctt cttgagtatc
    12481 tgctttgtga atacttttaa tatttacatc tttatcaaag cctgcactta tttctacatg
    12541 atatttgttt ccattaactg aaactgtaaa tttattctca tcaataccag tagaattttg
    12601 ttttggcgca gacacattct tgcgcacatt aactttagct ttacctttta aatacgctat
    12661 acctttttct ttacaagctg ctgcaatgaa aatattttcc tcgcttaccg ctatgccctc
    12721 tttttcaagt aaactcttaa cataggctat acttttggtt tcatccttat ccgctatatc
    12781 gatagcaagt tctgtagtgg gctctaaatt tagctgttta gctgcaagtt ttttaacttc
    12841 agcatcaggc tcgacaggag ttttaccaaa atatcccaat accatttttc cataaccttc
    12901 agcaattttt tcccaaggtc caaacatgac attgttaaaa gcttgttgaa aataaaattg
    12961 agaaacagga gttacagaag ttccaaaacc acctttttcc acaacttcac gcatagcatg
    13021 aataacttct gggaatttat cgagtatatt attatccctc atcatttgag tattggcagt
    13081 taaagctcct cctggcatag gagagaatgg gattaaagga cttaccattg tagcttcagg
    13141 cggtaaaaaa tactctttta aagaatcttt taaaactgct tcgtatttta aaatcttttc
    13201 ttcttctaat ccacccaaat cataattttt accttttaaa gcatgcatca tagttaaaat
    13261 atcaggctgt gaagtacccc cactcacagg agctgctgct aaatctatac catcaacccc
    13321 agcttccaat gctgctaaat aacaagctat actcactcct gcagtttcat gcgtatgaag
    13381 tcttatatgc acatcttgtg gtaaattttt tctagccatt ttaatggttt cataaatttt
    13441 atttggattt gaagttccgc tagcatcctt aaaacaaata ctatcaaaag gaatttcagc
    13501 agctaaaatt tcttttaata ttctttcata aaatgataca tcgtgggcac cttgacaatt
    13561 tggtggtaaa tccattaaag taattgtgat ttcatgtttt aagccgtatt ttttaataca
    13621 ttctccactg aatttaagat tatttacatc gtttaaagca tcgaaatttc taattgttgt
    13681 agtgccatgc ttagcaaaaa gtttggcatg taaatcaata agctctttac ttcctgtatc
    13741 caaagtaaca gtatttacac ctcttgctaa agtttgcaaa ttcgcatctt ttccaacaat
    13801 cgaacggaat ttatccatca tttcaaaagc atcttcatta aggtaaaaat aaaggctttg
    13861 aaaccttgct ccacctccaa attcaaaatg agttatccct gcttctttgg ctgcttctac
    13921 tgctggaaaa aaatcttgca ttaagactct agccccgtaa acagattgaa aaccatctct
    13981 aaaacttgta tccataacat ctataaattt tttagccatt tattttcctt atatgaaata
    14041 attaagaaat tttaacaaaa atttgataac acattatgca aataattgct ataggtgata
    14101 taaaacgaat aaaaaatagc caaattgtaa atatttgacg atttacaaat ttggaaaata
    14161 ttttataaat tcgcttttta tccacaaaaa aacctacaaa tatagaactt acaatcgccc
    14221 ctaggggaag taatatatta gaagtcacct tatctaaaag agtaaaaaaa tcttttccaa
    14281 aaatactaaa taaactagaa aaatgagtat ttaaagataa aatacaacaa attcccaata
    14341 caaaaacgat aaaacctata aatgataaag ctttaatacg agaaatttta taattattaa
    14401 ccacatagaa agtcagaggc tctatcattg aaaccgcaga agtaatacct gcgaaaaaaa
    14461 gtgccaagaa aaaacaaaag gctaaaacat aacctaaaat tccaagctca ttaaataaac
    14521 tcatcaaaga tacaaatact attcctggac cttgtatatt tggatttgcc tcaaattcaa
    14581 atataaaagt aaaaactata agccccatga taaatgagat aagaagatta atcaaaacta
    14641 taaaaataga acttttgata aaatttattt ttttgcttaa agccgcagaa taagtcacta
    14701 tacagcctat tcctaaacat aatgtaaaaa aagcaagccc taaagcttca gcaatagaac
    14761 ttaatttaaa atttgaaaaa tcaggataaa aaagataaga aaaagcttgc ttaaaaccat
    14821 tttgaaaact catacaataa agtagcataa aaataagcat gataaaaaga cttggcatta
    14881 taaccacatt cagtctttca atgcctttta ttaaaccctt agacacaatc aataaagtaa
    14941 gaaaaaaaga taaagaaaaa aataaaatag aattgcttaa atcagcactg attaaagtag
    15001 aaaaatcact tcctgcttgc tctaaatttt taggtaaata ataaagacta gtcaaggcat
    15061 attttaaaac ccaacccata attaccaaat aaaaagaaag aacaaaaatt ccacctaagg
    15121 tgaaaattcc accataacgc catcttctgg catgactttt tgcaagagta tagtaagcat
    15181 ttgctaaatc acttctactt aaacgcccca ttgatacttc agctaaaaag atactaaacc
    15241 ctatactaag agtaaaaaat aaatacaaaa gaacaaaaac aaaaccgcca ttttcagcgc
    15301 ttagggttgg aaatttccaa gcatttccca aacctacagc cccgcctgca acagctaaaa
    15361 tgaaacctat ttttgaaaaa tatgttctca tttttaatcc gattttactt taaaaaagca
    15421 ctaatcataa caacaataac cgccaaaggc gaaataaatc ttaaaaagat ataccaaagt
    15481 tcaaaaaata tacccttcat ataaggacca aataaaattt gcaaagcttc ttttttgatc
    15541 acaaaaccca caaaaatagc agctaaaatt ccacccaaag gcataataat tttacttgat
    15601 aaagtgtcta aaagatcaaa aacactaaga ccaaaaattt taaatgcagt tgaatccaaa
    15661 gaagacaaaa tacacaaaat tcctaaagta taaactataa ttcctatcaa aattaaagct
    15721 tttttacggc tcattccaaa gctattaatt aagtaaaaag caaaaggctc tatcattgaa
    15781 actgctgaag taatacctgc aaaaatcaaa gatataaaaa aagctgctcc taaaatatgt
    15841 cctatagctc caagtttttg aaataaagtc gctaaagaaa cgaaaatcag acctggaccc
    15901 tctttgcttg catcaaaacc aaactcaaag ataaaggtaa aaacgactaa acccattaaa
    15961 agtccgatta aaagattgat aaaaatgata tttagagtgc tggtaataaa atttgtacgc
    16021 tcaggtaaac ttgctgaata agtgataata gtccctaccc ccaaagataa actaaaaaaa
    16081 gcaagtccta aagcctcaag cacattagaa gtactaatct tagaaaaatc aggcacgaaa
    16141 agaaattcaa ccgccatcat aaaaccatct ttagtcattg cataaataag catcaaaaca
    16201 agtaagataa ataaagctgg catcatccaa acatttagtt tttcaatgcc attttttaca
    16261 cccttagata ctgtgtaaaa aacaattaaa aaaatcaagg taaaacatac aaattgactt
    16321 acaaaatcac ttgaaattaa ttttccaaat tcagcagaac ttgtattaag atcaggatat
    16381 aaatttccgc taatacttaa atatgcatat ttaagtatcc agccaattac taaagtataa
    16441 aaagaaacga ttaaaattgc tcctatcata gtaaaacctg cataagacca agctttttta
    16501 tttgaaggag caagtttttc ataagcatta acaggatctt tttcactaat ctttcctata
    16561 ctaagctcgg ctagaaaaat aacaaaacct acacccaaag ttaaaataat ataaagcaat
    16621 ataaaagcag aaccgccgct ttgtcctacc aaagtaggaa atttccaagc atttcctaag
    16681 cccacagctg aaccggcaac tgctaaaata aaacctattt tcgaaaattt agagttcaaa
    16741 atttacaacc ttgtattaaa aaattatttt taaagtatta ttaaagcaaa aaaagtttta
    16801 atctttaatg aaagtaataa aaatacttta aaaatgtgaa atttagtaaa tttcaataaa
    16861 attaaagata atttttgata tattttcaac ttagttttaa atcttaagta gggatacgca
    16921 agccgaactg atttaaaatt aaaacattaa aactctctat aaattttaaa gaaaggttac
    16981 aaaaatgaaa aaaatctttt ttctattttt agctcttgca gcaactgctt tcgcagctga
    17041 agctaatgca cctgttgaac aagaagctat caatgtatgg atcaaagcgt tttctgtttt
    17101 agcggcaggt ttaggacttg gcgttgctgc actaggtggt gctatcggta tgggtaatac
    17161 tgcagcggct actatagcag gaacagctag aaacccggga cttgggccaa aattaatgac
    17221 aacaatgttt attgcattgg caatgataga agcgcaagtt atttacgctc ttgtaattgc
    17281 tcttatagca ctttatgcaa atccttttat agtttttgct taatcttaaa aaagctctat
    17341 tttaagtagg gctttttatt tctttgaatt ctaaaatttg cggttatggt ggaattggta
    17401 gacacgccat cttgaggggg tggtgcgctc cgcgtgtgcg agttcaaatc tcgctaaccg
    17461 caccatttat acttctttta gcttttttca atttttttta cttcttttta atcatctata
    17521 aaataggctt ttcgtagata tctaattgct ttagattatt tttaatttat tttaatttat
    17581 tatacttgca gatatttttt attgactttg ttattgacct agctaaaatt tgctattgac
    17641 tttattgacc caaaggaata aaagtgctaa acgataccaa aataaaagcc ttaaaagcta
    17701 aagacaaaaa atactatatt gctgattttg acaacctact tctttgtatt tatccgagcg
    17761 gtaagaaaac ttttatattt aattataaat gtcctaaaac tttaagatac aaaagaataa
    17821 ctctaggaga ataccctacc ctcaatcttg ctaacgctag aaaacaaaga gataatctaa
    17881 aagtaaattt agctgaaaat gacagtataa gagaaaagta tgaaataaca tttaaagaat
    17941 tagcattgga aaaaatggat cttaaaaaac ttgaattaag cgaaaaaacc tacaaaagct
    18001 atatgagtta tttacaaaga tttgcttttg gaatttatgg agaaattata ttagataaat
    18061 tgcaaatcaa ggatatttta aaaagttttg aaaaatttag aaaagaaaat ataagagaag
    18121 gtgccgataa gttctttact cttttaaatg aaatttttag acatggtgtt ataaaagaat
    18181 atattaaaag taaccccatg gcaaatctaa atagaaaaga attgcttata aataaagcaa
    18241 gtaaaaatca tgccaccttg ttagaaacta aagaaattaa agcattagta gataatataa
    18301 ttgattacaa gggatatatt agtgtaaaaa ttgcagcaat gttttcttta ttaactgcac
    18361 aaagaagctt tagtataaga agtgcaaaat gggaagatat tgatttggaa aatggtattt
    18421 ggtatatacc gcaagaagat atgaagatga aaagagcgca tactatacct ttaaattctc
    18481 aatgtgtata tatgcttaaa aaatacaaag agatgagtat taatacgggc tatttatttt
    18541 atagtttaag aagtaaaagt gaaattataa gcgataacac aattagatcc atgtttagaa
    18601 gaatgggcta ctctaatgat gattttacac cgcatggctt tcgtgctatg tttagcaccc
    18661 tagcccatga aaatagaaat aaacaccaaa tgagtagcga tattatagaa ttgtgtttag
    18721 cacatgtaga aaaaaataag attaaatctg catataatca tgctttaaat ttaaaggaaa
    18781 aagctatcct tatgcagtgg tggggagatt atctcgatga gattgctgat ctaaatcaac
    18841 aagtccgaaa tattttttta taaaattttc aatatcttgt ttaggataca atcccgaaca
    18901 atttctatgt tgtttaaact ctctaaattt gccttgtttg gcgtatttgt gaactatagg
    18961 ctcttttact tttaaaagat ttgcaacttc ttttcttgtg tagtaatctc cgatatctaa
    19021 tctaatcatt ttaaactcct aatcttttat ctataatttc aaaaatagta tccttgtaat
    19081 aattccaaag ccatttctgt tcttcatctt ctaaatcatc aacgcttaaa ttacgccatt
    19141 cttttattgt tttagtatta caacctaaat tcatcatagt ttttgtaaaa gtcacaacat
    19201 aggtatccac gacaatacta aagatatttt tcatatctcc tatacagtcc ctaagactta
    19261 cattttcaaa tatacaattt tcaaattctg ttcttaaaaa attacaaaaa tagaaacttg
    19321 ctccactaaa atcgcaatct ataaaagatg tattcttact tgaaatatca tttaaattag
    19381 cgtttttaaa gctagtgccg tttataaaca cattatcaaa atctaagcca cttaaattta
    19441 gattttctaa gtttgcatca tttaaagaaa taccttctaa aatgcaatac tcaactaatt
    19501 ctttttcact tttcctatca ttttcgataa tgatagtttc atcaagtctt tttaaaattc
    19561 ccatctcatc tccttaatat ttttctccat ttttcttcgt attcttcata attttgccaa
    19621 taatcaagac tttgctttag cttcttaaca acagcatccc aagttgtcat ttttgaactt
    19681 tctaatgcta ttttttcagc taaaaactca aactcccact ctttaaagca aagaatgtca
    19741 taatcacgag caagtatttt tctaagctct agtaattctt ccttgctaag ctttctttta
    19801 aaactcaact cctttttatg ttctaagtcg tattgtaatg ctttgatttt gttttcatat
    19861 ttttcctttt gttgtgctaa ttgtgatttg tagccgattt tttgatgatg atttaaagaa
    19921 tttagtcttt gattttcatc gcttagggtt ttaaatctag cttgtgtttg ctctcttaaa
    19981 agcttagcta cttttttgcg gtattcttta gccttaggac tttttataaa aaagcctagc
    20041 atataaacac cttctaaagt ccatttgatt gtcttatttt taaaagaatt ttctactaaa
    20101 aaataatgtg tgttttctat aaactcatca ttatgcatcc taagatgttt tgctatcgtt
    20161 aagcctgttg ttaagccata attaatagcg acttgttcat ttgtaaaaat taaatttgaa
    20221 gtgatatttt tttgcataat cctacctttt gctaattata aaaaagtagg attgtagttt
    20281 tatttagtgt tgtgttttgt gtttttcttt ataaaatgta taaactaaag ctattgaaac
    20341 tataactaaa gttaccgcac caattcctaa aatgatttcc attttaactc cttttagatt
    20401 taatttcgcc aagccctgaa agaaacataa ttaaaatgcc ttcagctata gcataagtcg
    20461 cttgactttg tggaacatcg ctaaattgca aagcaaaagc tccatttaca aaaataccta
    20521 aacctatatt tcttcctgtg ttaaaaataa gttctaacat tttttccctt tttaaaagtt
    20581 tagcacacta aataaaattt aacaatatat ttttacaaaa ttccttaatt tcctgtgctg
    20641 tcatttttct cctttattta aaacataaat ttaaggctca tttctaaagc cctatttaca
    20701 atacttctta taagctcatc tcttcctgta cttaaagctt ttctaagttg cactcctaag
    20761 ccatcttgtt ttaaaagctc taaggctttc ggttttaaaa tagctttttt aacttttccg
    20821 ctttctaaat ccatactctc aaaatccaaa aaatgattat tttttaggta atttatcgta
    20881 tgataagcgt ttaattgatg tgttaaaaac tcttcatatt ctagttttgg gataaaatca
    20941 aaaaagttaa aatcgcttgg aataggaaag gtactataaa gttctcccaa agtttttgcc
    21001 gtatagcttt caaaaagctc aatattttca ctcatttaaa tccccattta ttgcaaagca
    21061 aatttaaatc cgtatttgtc tttaaaagtt catcaaaata aagctctagt ttatcaatat
    21121 aaagtctagc gccttttaaa tcatcatttt gtatattttt aattgctaga tttttactat
    21181 ctttgataag tctttgaagc tcatcttttt tatctttaag ctcagttaaa cgacctcttg
    21241 cgtaagtaat tgtttcttct tgcattttaa tcctttatct catacaaaat tcgattaaat
    21301 catcaatatc atttaaatca tttttagaaa agtataaata agctttagga ctgattaaaa
    21361 ctcctgaaaa atcgccatta ttttctttat cgtattttaa aactttgcat tcttttagaa
    21421 aatgaataca agagctaaag tctattttat attctttaca atctttgtta aaatcatctg
    21481 aaaaaagtat gctttgattt ggaaaatcat ttaaaagtgt ttttataata cgttttgaaa
    21541 taagcttaaa agctttgaag ttttccatta attctccttt attttatcaa aattttactt
    21601 aagcaaatag acttctttct atatgtttaa acataatttc attagcactt ttaaaaaagt
    21661 cttttttaat ctcaaagcca taagctttgc ggtttaaatt tgtagctgct aaaagagtgc
    21721 ttccgcttcc agcgcatgga tctataacaa catcacctac atctgtaaaa atagtgatta
    21781 atctttctag caatttaaca ggcttttgtg tgggatgtac tttaggaata ccttcatctt
    21841 tttgccaatc catgcagtta taaatcatct tgccatcatt gttaaatttt ggaagttttt
    21901 cacgatataa gattaaagca tattcacaat ttccaactat tttcatattt gcttttaaaa
    21961 cttgagatga gctttgtttt ctaaaaacca aatttatata atgattaaag ccatattttt
    22021 tagctacttc aattaacatt gcttgttgct caaaagagca aaaaacaatc atgcaaggac
    22081 ttttaccgca ttctttaggt tcttttataa gcatttttga acaaaagtgc ataaattcgc
    22141 taactctaaa atcattatct gtatcaaaaa atgccttgtt tgcttttttg ctttttccat
    22201 ttttattatc accatttata taccattcag gacttgaagc ataagcattg ttgtctaaat
    22261 tataaggaat atcagctatt acaagctgtg cttttggtat attatatctt ttaaaatttt
    22321 gaaaatggtc gttatataaa tttggtttca tttttacccc ttaaaaattt ttcaacatct
    22381 tcaaaagctt tcacaataag ctttttttca tgaaagtaat ttcttccgct tggcttactt
    22441 ttgtaaattt tgtaagcctt tctgagttct tttttactta tgtgattttt ataatttatt
    22501 ttttcaattg caatcccatt gcttcttaaa aaatgacaaa agcaacttct cctctcgcta
    22561 aatggaacga tttttacaat ttcaagataa ttagaacggc aaacttccat catcatctcc
    22621 tatttcgata tatttttcat tgttattgtt ttttacttca tttccataag gattatagct
    22681 ttgattttct tttggaataa atgatttgtt attgtcgtta tttaaagatt tatgccttgc
    22741 tttaaaagat tttatagata aaggctcttt attattttga aactcatcca tgctttgcat
    22801 tttttcatta aaaattctat caagaaagat tttgttagca agttctccat ttttacttaa
    22861 atattcttct gttccaaaac ctaaaactaa aagtttatta actaaagaat ttagataaat
    22921 aacttcagtc tgcaccccaa aaacattttc attccctttt tcgttaaaag caagctcatc
    22981 aattccgaag aatttcataa tggcatttaa ttgcctaaaa cctaaataat tttctttttc
    23041 accattttta ttgatatagc taaaatcatt atttttagct acaaaaagat taaaaatagc
    23101 tagtttttgc tcttttctgg ttaaaaattc aaaacaaata aaagtattat tgcttccatc
    23161 gcttgccaat ttatcatata aaaaggcttt gcggaaaact ccgctataaa gcccaccttc
    23221 acttaaatac tctacgcttg gcgaataatt tgccacttca aaacttgcct taaatgctgg
    23281 taacattata attctccctt aattgtttta attgcttttt ctttgtttgc taaaacactt
    23341 tgaaatttct ctttagtaaa aatattatat ttgatgataa attcttcact ctctttcttg
    23401 ctgatgccat tttctttaat aaaggcatca tactgagctt ttagctcttg caactcttta
    23461 agagaattat taatctgctc ttttttatca tctatagcct ttaggtttga atttgaaaaa
    23521 ttataatttt cattatcaat gctgataacc ccatctaaaa catcactctt tataaaataa
    23581 tttatatgtt taattgctct tctaatagct gattttcttg ccatttcttc gggaaattct
    23641 ttataaactt tcccttcttt tgaaaaagtt ttgcttttaa tcgtatctat ttgctcttta
    23701 tttaagaact cagcttttct ataaagcaaa ttaccatttt ttactataga aattagagca
    23761 taagctcctt ttatagaatt atcaagcgga tttttactaa tgcttagatt atcaatctca
    23821 ttctctgtga tgattttcac ttcatcacta tttgaaaccg tatcgctttt aacgataatt
    23881 tcaaacccgc gctttaaagc ttcattaata gcaactttta caagtcccat atagctaggc
    23941 tctatattta cattattgcc catagggact atataataat cattatttag aatgctaagc
    24001 ccagcctcac taagattttt aacttttaaa aatgatgcgg tttgattatc ttttaaaact
    24061 ttcataaccg cattatcttc tgaattaaat ctttcattga ttaactttag ctcattttcc
    24121 aatctttcac ttattacaag cggatttctc tcttcaaact ctttaatctg tgttgatttt
    24181 ttacccatgt ctactatttc tgtaatttca ctgctcatct tatgctcctt ttttaatttt
    24241 taaacacatt gaagtacttt ccttataaaa ttctttaggc acattaatat tttgttgctc
    24301 taaaaatccc ttataatcaa ttgtggttct aatctgtgga tatattgtga tatctaaaca
    24361 tcttgccttc tcgccatttg ctaaggctat gagttctttt ttaagacttt ctagcttttc
    24421 tttaataggt ttaatcgtgt tttcaagtct tataatttca atcgttaatt cttttgcgtg
    24481 attatcatca agatctttat aatcgctttt ttgattgatt atataatcca aaataaattg
    24541 ttttacgctt ttaaccaacc attcttgata agcttcatct cttaaaactt cgcactctac
    24601 aatctcttct tctttgttca tagctacaaa tatacatttt tctttaccac tgatatagag
    24661 ttgaaattgc acttgagcgt agtatttatc acttggcttt ttatttcttt tgataaaatc
    24721 atactcatct tgcgagtatt taaactcata aataattcca ttttcatcta ttccatctaa
    24781 acttgctata aacatttcat tttctagact ttgcaaaact acaggagtga tactcacaga
    24841 atgtaaaaat tcaaccctag ctctaatcaa aggctcatat tcattgcctc ttctcatagc
    24901 tttgttttga tagacttctt taagtcctaa gatgatatct cttgcctctt ctttagagtt
    24961 aaaagcacct ttaataccta cacaagatgc taccatcgat gcacctattt ttccttttct
    25021 aaaatttaac cattccacac taccctgctc taaatcaatt attttatact gcatgattaa
    25081 ttccttctaa taataaattt gcgattttaa tttgtccttt gcctgtgatt ttcgttgtgc
    25141 ttactaatct atctccattt attgtactga tagttgtttc acttactttg aaaagtcctt
    25201 gctctatgca tttttgataa ggcttattat cactcattaa aaagccatta tcccttaaaa
    25261 aagcaaaaag tcttttttct ccgatttcaa ttttattttt ttcataaagt atttttgcga
    25321 aatctcttat taaaatagca tcattagtat cttttatacg atttgcaaag tgaataagtg
    25381 gtgcgttttc tttggcttca ttttttaaat ttagattttc aatttgaagc ttttcatttc
    25441 tctctaaaag ttctaattgc atttgcaaac tttcttttaa tgaaagcggt ttataacttt
    25501 gtttcttaag ctcattttct aagtattcta atctatcgat tatctttgct cttagttcta
    25561 cgctatatcc actcactaaa atcaatactt ctctttttgg taagcggtaa cacttgtaaa
    25621 actgcttatt ttgtgggttt tggtaggtat gctcaaattt gaagacaccc ccttcaacca
    25681 ctttttctaa gtaagtttct atatctcttg taacatttct gtgttctttt cctgtaagct
    25741 ctgctatctc taaagaagtt aagcttattt ctttgttttc atcttttcta aacagctcta
    25801 aattcatttt tcatctcctt ttaataattt taaaattttt ttatctctag ccttgttatt
    25861 ttgaatataa ttatcaaggc aacaaaatat actgaaagca aattccaata cttcaagatt
    25921 agtcaaatct tttttacctt tagttgcttt tgttaaacat tctaaaaact tttcttcttg
    25981 gttcattggt atccttttgt aattttttgt attcttaaga attacaaaat tatataaaat
    26041 tatttttgta ttgtcaagta atacaatgta tgctttacaa aaaataactt ttttagtaaa
    26101 attacaataa aatacaaaaa ggaaaacatt ggaagagaaa caaaagacca ataaatcaga
    26161 aataatatcg ataaggcttg atactgtaac aaaaaacaaa ctcgcctata tatgcgaact
    26221 tgagtatcgc cctatggctt tacaaataag aaaaatcatt gaagattata ttaatactta
    26281 tgaaagcgaa aattcattat ggcaaaaagg tgattaccct aattagtttt atttttattc
    26341 ttaacataat cgcttaaaat tttaactatt tgagttgcta aagggcggta ttctttatct
    26401 gctatttttt gcaactcttc ttttaattct aatggaattc ttatacttag cggttttgtt
    26461 tgtcttttca taattcttta tcctttaatc tttttacttc tttaatagct ttatcatcat
    26521 ttttaaaaac gcctataagc cctaaagcat caaggatttt tatacgaaaa ttactaagtt
    26581 ttacattgat ttcaatttct tcttctagct tcaatgaaat ttcatttata gcagtatctt
    26641 ttaatgctat tacacctttt agcctttgaa tttctttttc taaatatctt attttttcat
    26701 tttttttact atttaagaac atagtttcga cctttctttt gcataaagaa gctcataaat
    26761 tttattttgc aaagagctaa tttcttttat atttttcata tttgcttcta tttggtcttt
    26821 taactctttt aaaagctcta ttttttcatt ttcaagatta gaaatttcat cttttaaaga
    26881 cttattttca tcttttaaag acttgtttag cttcatttct tttctatatt catctttact
    26941 aagtttaatg atgacttgtt cttttgtgtg ataagctttc atttttctcc ttttagatta
    27001 atgcttaaaa ggggcaactg agttctttag aataggaaat aaaacaaaaa aggtaaattc
    27061 tcaagtagtt aatttgtaaa agttgcccca tttaagcatt aaaggagttt aagaaaagcc
    27121 aagagccttg ctctcttggc gtgagtattg tttaagtata ggctaagcaa ggctattcta
    27181 taattttagt ggttttttag tttagttgat tgattatttc aatcaacttt tttactattt
    27241 ctaacaataa aaaagcaatt tttaaaaact tctctatcat caaaaacagc tccttcccca
    27301 ccaagagaaa ttagccactt aaacaatgtt attttatcaa atttattttt atttttgata
    27361 aagccgagca aatccgcaag tctcggcatt gtataatcgt ttaagtttat gctaagcgga
    27421 tttagttaaa atttatctgt gttaaaaaat attagagttt tataagctct ctaattagct
    27481 ctaagattaa gattaaaatt gttaaaattt tatcccacat tttagagcct cctttctcaa
    27541 caccgagaca agttagcaac ttaaacttta taattatact ttctttttct taaactcttg
    27601 attttctgtc gtttttaaag tgcaagaaaa ccttaaaaat agcactataa acaataatat
    27661 cgagccaagt ttatggataa cttgctaacc cttccgctat gctattgcta ttgttttatc
    27721 cgaaataaat tcgtttaaaa ccgctttgct aaagcccccg tcccactgcg tgggtaagag
    27781 taaagcaaaa aaaaagaaca ttagcaatta agcttaattt ccaagcggtc aaaagcttaa
    27841 gaaagctctt tttttaaaga acttgttaaa cttttaataa agcttttcgt atttcttctc
    27901 aaatttcctt actttttcca ataaatcata ggtatcgtta ataaactcat ctccataggc
    27961 ttgcaaagaa gctgcaatat cttcatcatc ttccaagctt acttctaaaa tatttttaaa
    28021 ttcttgcaaa gagttaaaaa tatccgcaaa gttttctctg ctctctaatt catctttaac
    28081 taattctctt gcgtagttag aaattctttt ttcttctcta tcgaaataca aatctgtaaa
    28141 actcattttt tatccttttt tttagttata attactttca ctctaggaag gtgatgtaat
    28201 ggacgaaata caaagcttaa aagctcaact taataatctt cttttaagag ttagcgagct
    28261 agaaagtaaa gtcgcaacac ttgaaaaaag actaaatgac aaagattttc aagttttaaa
    28321 cgaaactcct aatcttttag agaaataaca aatcctttgt tttcaaatgc ttctttggtg
    28381 attaagtttt taactgcatt atgaagaaca ttagctaaaa actcttccaa agaagcgtaa
    28441 ctttttgaat aatttctttc aaaggctatt tctagcattt ttttaatatc aggtcttaaa
    28501 tctaatttaa cctctagcat tttttcatcc tttttgtt
//
LOCUS       DBBXOW010000013        27772 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.013, whole genome shotgun sequence.
ACCESSION   DBBXOW010000013 DBBXOW010000000
VERSION     DBBXOW010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27772
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.013"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(109..184)
                     /locus_tag="ACJE1S_000581"
     tRNA            complement(109..184)
                     /locus_tag="ACJE1S_000581"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(149..151),aa:Met,seq:cat)
     gene            complement(216..290)
                     /locus_tag="ACJE1S_000582"
     tRNA            complement(216..290)
                     /locus_tag="ACJE1S_000582"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(256..258),aa:Gln,seq:ttg)
     gene            397..1416
                     /locus_tag="ACJE1S_000583"
     CDS             397..1416
                     /locus_tag="ACJE1S_000583"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HGG0806150.1"
                     /translation="MKFVSIEQAIKDLQEGKMLVMVDAEDRENEGDLIFPAQFSTKEK
                     VNFMIKEARGVVCVALAEELARKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RDMTIKIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCHLAGLKQACV
                     ICEIVKDDGDMARRSDLEEFCTKHNLNMIAVSDIIEYRLKNESLIKLQEKSDAILAGF
                     KAQKFIFTDHNNAQHIAFAFKEIQKCENVKFHISGSDFELLTSDKFSKLLDQIRFLSE
                     NGGVIVFMQGEKSSVTQFKNYGIGAQILRYFGIEEIKLMSQSCDKDYIGLKGFGLNLK
                     ICNFN"
     gene            1433..1876
                     /locus_tag="ACJE1S_000584"
     CDS             1433..1876
                     /locus_tag="ACJE1S_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HGG0806151.1"
                     /translation="MNLKEQILNDIKEAMKQKDDFKRDTLRTLNAAFKQVEVDERIEL
                     SDERILKIIASEIKKRKDAIELYSKGGREDLAQKEQKEIALFESYLPQQLSDEELQAA
                     LKEMIANLGVSSLKDQGLVMKEAKAKFGARVDGKRLNVTLRELLN"
     gene            1954..3654
                     /locus_tag="ACJE1S_000585"
     CDS             1954..3654
                     /locus_tag="ACJE1S_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HGG0806152.1"
                     /translation="MRKISGSAMICEALKEENVKIVFGYPGGAALNIYDEIYLQKYFK
                     HILVRHEQAAVHAADAYARMSGEVGVAVVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIAKSGRKGPVHID
                     VPKDVSAALGIWDYPKEISMKTYKPIYKGNSKQIKKLAENLEEAKRPLFYLGGGCIAS
                     NAANEIRELVKITQIPAVETLMALGTLRSDDELNLKMAGMHGSYTANMALSECDLLVA
                     IGARFDDRITGKTSEFAKHSKIVHIDIDPSSISKIINAHFPIVGDIKEVVKELLEELK
                     KNQFKSNIHEWRQTLKRYDELYPLAYEDSDEVLKPQWVIQECAKLAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYENGIKTINIILNNSFLGMVRQWQSMFYEEHFSATDLSLQADFIKIAEGFGCE
                     GYNIKTKDEFRTAFKQALESNKTSLLNVFIDRFEDVLPMVPAGGAIYNMILPKLKDKQ
                     "
     gene            3651..4115
                     /gene="ilvN"
                     /locus_tag="ACJE1S_000586"
     CDS             3651..4115
                     /gene="ilvN"
                     /locus_tag="ACJE1S_000586"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HGG0806153.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLLGGEFS
                     RINIVTFGDERVFEQIVKQLHKLIPTYKVIERDEFIEKEMALVKIPLSENLGGLDAVL
                     KAYNGTIANSNENFLFLLVADDTNRIENFLKTIKKYNPSDIVRSGSVLMELK"
     gene            4112..5065
                     /gene="lpxD"
                     /locus_tag="ACJE1S_000587"
     CDS             4112..5065
                     /gene="lpxD"
                     /locus_tag="ACJE1S_000587"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HGG0806154.1"
                     /translation="MRLKEIAEFLSLEYEGEDIEITALNSLLRANFTELTYCDGERNI
                     KDIPNTGAAAILVAKEYENLVPKDTKALITQSPHLCFAFLSKIFAKPLFSNAKEKVQN
                     IAKSAKIMPNVYIGNNVNIGENVVIMAGAYIGDNVSIGEESIIHPNVVIYNDSKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVILEDFVEIGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCDIGQNCIIVAQTGISGSSELGRNVVMGGQSATSGHLRIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAMKFKE"
     gene            complement(5068..6093)
                     /gene="queA"
                     /locus_tag="ACJE1S_000588"
     CDS             complement(5068..6093)
                     /gene="queA"
                     /locus_tag="ACJE1S_000588"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HGG0806155.1"
                     /translation="MKDLLLSSYDYTLPNELIATYPVHPKEDAKLLVFEQKNNQISHT
                     TFKNLQDFLPDCALFFNDTKVIKARIYGNKSSGGKIELFLHQPCLDSQDSLFLAQIKG
                     RVKKDEILSFEQNLKAKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHVPLPPY
                     IKRSDEKSDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRHEIYHLTLHVGAGT
                     FKSVECENLENHKIHSEFFDIPKKACEVIDSQKKILGVGTTVTRTIEYYARTKQNQGF
                     CDLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSY
                     GDAMLIL"
     gene            complement(6090..6836)
                     /gene="tatC"
                     /locus_tag="ACJE1S_000589"
     CDS             complement(6090..6836)
                     /gene="tatC"
                     /locus_tag="ACJE1S_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HGG0806156.1"
                     /translation="MFEELRPHLIELRKRLFISVACMIVMFIVCFAFRSYILDVLKAP
                     LIQALPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFIVVPLAFKFLINFGLSEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAVLAIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDEEKEESDK"
     gene            complement(6837..7241)
                     /gene="tatB"
                     /locus_tag="ACJE1S_000590"
     CDS             complement(6837..7241)
                     /gene="tatB"
                     /locus_tag="ACJE1S_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HGG0806157.1"
                     /translation="MSFGEIIVILIVAILVLGPDKLPEAIVQIAKILKALKRNIDDAK
                     SSIEKEVRINDLKEEAKKYKDEFSSANENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RENSTPSPNEQNPNENQKPKLNPFENQEKVEK"
     gene            complement(7304..8371)
                     /gene="hemW"
                     /locus_tag="ACJE1S_000591"
     CDS             complement(7304..8371)
                     /gene="hemW"
                     /locus_tag="ACJE1S_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HGG0806158.1"
                     /translation="MHLYIHIPFCESKCHYCAFTSLKKHDYENRYFEALYEDISFHLQ
                     KLNIKKNSIKTLFIGGGTPSAVSAKNFEMILTLLEPFLSKNIEFSSEANPNSADIEWL
                     KTMKNLGLNRISFGAQSFHPKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDT
                     KLDDKKMLEFELEQLKQIKNLITHLSAYNLTIEPLSAFAKKEHFKKNAPYLMKFFIQE
                     LQNLGFLQYEISNFAKNNAQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTAKNLKS
                     YLQNPIFRDVEKLNQEDLNLEHLFLGLRSIVGIKECKLSKIQKEKANLLVREKKLKFE
                     KGRYYNLNFLISDELALYLSS"
     gene            8466..8936
                     /locus_tag="ACJE1S_000592"
     CDS             8466..8936
                     /locus_tag="ACJE1S_000592"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HGG0806159.1"
                     /translation="MEKEKKYRPNVAAIVLSSAYPFECKLFIAKRSDMDNIWQFPQGG
                     IDEGEDPKSAVLRELKEEIGTDEVEIIAEHPEWLSYDFPEKVAKKMYPYDGQSQKYFL
                     VRLKHGAKININTKHPEFDAYQFVGVKQVFEIINHFKRNIYVKVIKYFEEKGYI"
     gene            8936..10138
                     /locus_tag="ACJE1S_000593"
     CDS             8936..10138
                     /locus_tag="ACJE1S_000593"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HGG0806160.1"
                     /translation="MLIVQKYGGTSVGTLERIDAVAERVIKSAKEGHQLVVVVSAMSG
                     VTNTLIEQAEYFSKNPNGKDMDMLLSSGERVTSALLSIALNERGYPSLAFSGRKAGII
                     TDSVSTKARISYIDTQAITKALNEGKIVVVAGFQGVDKEGDVTTLGRGGSDLSAVAVA
                     GALKADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVKLVTRSSFNDNEGTMITKEDGMEQALVSGIALDRNQARVTLRNIEDKPGIAAE
                     IFSVLADENINVDMIIQNVGVDGATNLGFTVPQNELDLAKNAMQKILGSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            10139..10672
                     /locus_tag="ACJE1S_000594"
     CDS             10139..10672
                     /locus_tag="ACJE1S_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HGG0806161.1"
                     /translation="MSDFLSFTLENIRNGGTFMAWMESRRLEWAPLMAARLRYLLEGR
                     TFVLMCDEQRAWYEEYFLANINSKTTRPMLPFVSLKSLCKKKIQNIEDIALLNDLLDI
                     SFPNGFIYFYIGSASDKKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDVKLITLY
                     KLFDTSLDAILFSKVSL"
     gene            10672..11283
                     /locus_tag="ACJE1S_000595"
     CDS             10672..11283
                     /locus_tag="ACJE1S_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HGG0806162.1"
                     /translation="MFVSKIIITDDFDGIRAELLKQFHPNSLRFIPKEVASEFLIDDA
                     KAVEKESYIAETSEKIIVLMANSFRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPT
                     IKSRLICEKRNKIKAKNTLNLELNKMDLKTLFEFLQENENLDKAELMEKIALIAEESV
                     KFKDFNVDELEFFYESYELAKLNSKSSLILATLLLNYYTKNEK"
     gene            11280..12422
                     /gene="folP"
                     /locus_tag="ACJE1S_000596"
     CDS             11280..12422
                     /gene="folP"
                     /locus_tag="ACJE1S_000596"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HGG0806163.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTQIHFILIKDIT
                     TPAANILKQDALRVGAELITHKEVITAKITHSNTLLMATKEQIQKLINKEKLQDFGLK
                     NLARFLENGFSKPKQAELMAVINVNEDSFNADSRVSYKDFEERLNEILALNPEYIDIG
                     AVSSRPKSVYCGKEEEFRRLKNVLDLIYDKNYYEKAIFSLDSFDEYCLEYALNKGFKF
                     INDISSLRNLNLAKLASKYNAKYCLMHMQNDPLTMQDDPRYDDLLDEMSSFFKEKLEI
                     LDTLGVKESILDVGIGFGKSAEHNMILIKHLEHFLQFKKPLLIGASRKSVINAYYESE
                     VKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFAMANAMQSIGV"
     gene            12423..14366
                     /gene="ligA"
                     /locus_tag="ACJE1S_000597"
     CDS             12423..14366
                     /gene="ligA"
                     /locus_tag="ACJE1S_000597"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HGG0806164.1"
                     /translation="MTKKEYLEKVALAASWMRAYYEKDEPLASDEEYDALIRELRVFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVLEIDNIPKTINYKEKIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFIKLCANLDEVLKAYNELLSLRDQKPMMMDGMVV
                     RVDDLALCKELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLFKEK
                     KINTLESIFHLKFSDFEGLEGFKEKKINNILNAIEQARDCELFRFITALGIEHIGEVA
                     AKKLALSFGKEWHKQSLEAYANLEGFGEQMALSLCEFSRVNSARIDEFYKLLNLKEQK
                     VQIQEDSVIFGKTFVITGALSRPRDEFKNLIESLGGKVSGSVSKKTDYVLFGQEAGSK
                     LDKAQELGVKCIDENEFNELIEK"
     gene            14347..15351
                     /locus_tag="ACJE1S_000598"
     CDS             14347..15351
                     /locus_tag="ACJE1S_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806165.1"
                     /translation="MSLLKNNIQLFVLLSIFAFLFFWQKFAWVSLFLIPIFLAFFLEF
                     FYFLRLRKNIIKEATMIKDSLIYRVSAGDFYIYSLSFFMALFALASLFLNLISFEKQD
                     GFFLFVLLPLFLFFFKQKLQLQFLDNAYNDFRIIILSSLILALLYAIFNGVVNPIQSF
                     NLEDFNQSIIYYKNSKFFIFDLISQILTLINALKEYFLYSLGLFWFRVLNFIFDFINF
                     FIFCSFVAYLYNFAFKAKKKTYVFVFSFFITLASFFIIEDKNQNPKAYQKELVLMMNN
                     LSFLKEQNLSMLQNDKDRLVKNLKQVQELLDKNAFEIGIWWFSKEKEELQKALNESLQ
                     "
     gene            15348..16097
                     /locus_tag="ACJE1S_000599"
     CDS             15348..16097
                     /locus_tag="ACJE1S_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HGG0806166.1"
                     /translation="MRYDIFVAKRLNLSRNKALELIENEEILLNSKPYKASFDVQNLL
                     KNKIADQEELLNSKELNLELLGELYVSRAAFKLKYFLENHNINIANKTCLDIGSSTGG
                     FVQILLEHKALKVSALDVGDSQLHPSLRDDKRIEVIENTDLRTFKSEQKFDFITCDVS
                     FISLTHLLSYIDNLALKDIVLLFKPQFEVGKQAKRDKKGVLKDEKAVLKAMREFENAC
                     ARLGWILQCCEESKIKGKEGNIEYFYYYAKK"
     gene            16066..16902
                     /locus_tag="ACJE1S_000600"
     CDS             16066..16902
                     /locus_tag="ACJE1S_000600"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HGG0806167.1"
                     /translation="MNIFTTTLKNDIKTLAIGCFDGVHLGHKKLIECLDDSGALLIID
                     KFKGKKLCTNQDKAFLAQKEIIELDFESIKALDGKDFLQALKEEFVNLERIVVGFDFS
                     FGKNRSYKAKDIEALSGIKTTIIDEFRLEGVGVHASLIKEYLAQGDIKKANSFLGRNY
                     AIKGKLIKGQGLGSKELFATLNLECEEYFLPKNGVYASIVSFHNKRYKSVSFVGVRSS
                     DMQFAIESHIIEKFDESLAIGEVLELEFVEFLRENQKFNDLAQLKEQISKDINQAKAC
                     LG"
     gene            16906..17610
                     /gene="cmoA"
                     /locus_tag="ACJE1S_000601"
     CDS             16906..17610
                     /gene="cmoA"
                     /locus_tag="ACJE1S_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HGG0806168.1"
                     /translation="MKDELFKEKLTKQFEFDKSVASVFDDMINRSVPFYRENLELCAN
                     LIKKLTKEGAKVCDLGCSSANFLIFLASLRKDLKLFGADNAPSMLEIAKSKAQAYGLN
                     IEFFEANLCDFVFFQSDVFVANYTLQFIRPPKRQELVNEIYKNLNKGGIFIMSEKILY
                     EDAFLSKNMIELYADYKERQGYSKIEIAAKREALENVLIPYSEKENLDMLKNAGFEKI
                     ESVFKWVNFETFIAFK"
     gene            complement(17614..17832)
                     /locus_tag="ACJE1S_000602"
     CDS             complement(17614..17832)
                     /locus_tag="ACJE1S_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HGG0806169.1"
                     /translation="MNKAILLTLICLFFTACEQTKSVEYYKAHPEEAKKRSDECRLKS
                     IISQDCVNAHSVAIPKEDWDEGHDTQTR"
     gene            complement(17911..18543)
                     /locus_tag="ACJE1S_000603"
     CDS             complement(17911..18543)
                     /locus_tag="ACJE1S_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HGG0806170.1"
                     /translation="MEISALTITILYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIVLICLCALVATKIPRIVSRLESLFLTLDAIGL
                     VVFSILGAQIAIEQNHGFIIAISAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYTLMVYLQLHALICTLVTLFVGVTARLLAIKYQWSLPIFSYNEEK"
     gene            complement(18553..19203)
                     /locus_tag="ACJE1S_000604"
     CDS             complement(18553..19203)
                     /locus_tag="ACJE1S_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HGG0806171.1"
                     /translation="MKLIIFLLAFTLHVFALEAYKPDKDFAPYFNPLNCSVVLDKFFY
                     TNCYDYKLKGTKAVAYKVEASNLKEKQIKKRARFEDDTNIPKKYRSTWSDYKNSGYTR
                     GHIASNASFRFSKAAQTSVFLMSNITPQNAQVNATVWNEIEQRERSLAFKFQSVEVLN
                     LILYGKNPKFIKNGIAIPSSYVKIIKTSRFEECYEVPNNNIQSEEINDYKISCNKF"
     gene            complement(19200..19826)
                     /gene="nth"
                     /locus_tag="ACJE1S_000605"
     CDS             complement(19200..19826)
                     /gene="nth"
                     /locus_tag="ACJE1S_000605"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HGG0806172.1"
                     /translation="MKRNSEIKELFLKHFDKPTTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPELFKAYPDITSLANANLSSLKTYIQSCSFYNNKAQNLIKMAQSVRENFNAEI
                     PLDEEKLKSLAGVGQKTAHVVLIEWCGANCMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRIFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELE"
     gene            19909..20730
                     /locus_tag="ACJE1S_000606"
     CDS             19909..20730
                     /locus_tag="ACJE1S_000606"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG0806173.1"
                     /translation="MRKVSLIAAALIAGVTLNLNAATIATVNGKNISDTEVSEFFAPM
                     LRGEDFKSLPDHQKKALLQQYIMQDLILQDAKKQNLEKDPLYKKELERAKDSILVNVY
                     QEKILNSIKVDSSKVKAFYEQNKEKYIKPAAVQAKHILVSSEQEAKDIIKELKGLKGK
                     ALDDKFSQLAQEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSRAKEQIKFDDVKKGIENGLKFEEFKKVINQKGQDLLNNAKVEYK"
     gene            20730..21794
                     /gene="fbaA"
                     /locus_tag="ACJE1S_000607"
     CDS             20730..21794
                     /gene="fbaA"
                     /locus_tag="ACJE1S_000607"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HGG0806174.1"
                     /translation="MGLLDIVKAGVVSGDELNKVYEYAKAQGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPQGDVLGAISGAKHVHLLAKAYGIPVILH
                     TDHAARKLLPWIDGLIEANAEYKKTHGQALFSSHMLDLSEEDLEDNLSTCETYLKKLD
                     SLGISLELELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKEKFGLEVDKPINFVFHGGSGSELKDIKDAVSY
                     GVVKMNIDTDTQWAFWDGVREYEAKNREYLQGQIGNPEGEDKPNKKYYDPRVWLRSGE
                     ESMIKRLELAFEDLNCIGRN"
     gene            21893..23347
                     /locus_tag="ACJE1S_000608"
     CDS             21893..23347
                     /locus_tag="ACJE1S_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HGG0806175.1"
                     /translation="MDIRSDEISELILPESKEKKGYLVYLKIIFIPALLYVFILLGYY
                     DIINFKVELHTVVMIGFIFFTALVFARHSSEYAYSIFEQQKDEFKQALKRHIMKHFLT
                     IGKDTKSNANFDDFAYAYVRGARNENFASIGAAIFPMMGILGTFISIALSMPNFSSSD
                     TAALEQEIALLLSGVGTAFYVSIYGIFLALWWMFFEKFGKSKIERLLNRQKNSTSGFF
                     WTKEELDQRYLSESLQHFEKISAIFKQVSNQDFFAELDHTIDRKFGIFQDMLNVEEKA
                     IRLSGEHIKQTMGELSRAQRDQRDLGKMYGEMLNGIGMLNQNLKEINMRMSEQYNRLL
                     DISSEKIQHFDKTLLAFDEKVDRFGKNFELYEKAILESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDKLKQEIKNLNEETNEVMAKIGKIPNPAQEEQDNIENEILSS
                     EKITENTEQTKENQNDSDTLDSNKNFNKEEKEDK"
     gene            23344..24294
                     /locus_tag="ACJE1S_000609"
     CDS             23344..24294
                     /locus_tag="ACJE1S_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HGG0806176.1"
                     /translation="MKNEQEEGNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDLR
                     EIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLINSQKAELEANITNY
                     EQLSKELNSSIDNKDKQILILLGQLEKKDEEIRNLQESFDKAKEKVQNLSLIRENLSK
                     ELQAKLDSNITIDQKTGSISLPSEVLFDKDSYTLKNEAKASLRKILSEYFNAIINDPK
                     ILSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKDIRLQKLLMASGRSF
                     SDPVLVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            24304..25173
                     /locus_tag="ACJE1S_000610"
     CDS             24304..25173
                     /locus_tag="ACJE1S_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HGG0806177.1"
                     /translation="MLISPIEKIQFQGFEFYIKRDDLLGEINGNKARKLAFYLSQNYN
                     QSQRFISYGGIQSNALVALSIFASKRNLTLIYACEKIPTYLRNNPCGNYKLALENNVY
                     FIENHSDKDLKTFALSLCEKDDVFIEQGVANLNAESGYIQLAKEIESQSKNLGLDFDI
                     FLPSGTGTSAAFLAKNSKFKVFTCACVGDECYLKTQILNLIKNYDFSNLEILKSDKKY
                     HFSKLYLEFYQLYKDLKQECQIEFDLLYDMLGLSIALKREWKNPLLYIHQGGISGNSS
                     MLERYIFKYCKDK"
     gene            complement(25175..25630)
                     /locus_tag="ACJE1S_000611"
     CDS             complement(25175..25630)
                     /locus_tag="ACJE1S_000611"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HGG0806178.1"
                     /translation="MKKIVFVCLGNICRSPMAEFVMKDLVKKANLEKEFFITSAGTSG
                     EHDGENMHYGTQNKLKSLNIKYQNFTSKKLTQALCDESDFLITMDNSNFKNVQKNYKN
                     TQNKLLKITDFASHLGYDEVPDPWYSGNFDETYQIISLACKNLLSHLQK"
     gene            25684..26868
                     /locus_tag="ACJE1S_000612"
     CDS             25684..26868
                     /locus_tag="ACJE1S_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0806179.1"
                     /translation="MENFNRTLWVCWFGVFTTSMGLSQIAPILPLYIKELGHTDTSEI
                     AFYSGLAFGITPLGMAIFSPLWAYLGAKYGYKNMLLRASLGMSALTLWLSFAHDAMEV
                     VLIRGLTGIVSGFTAAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGVAAGI
                     FSISVVFDLVAFLLACSFVTIFLFIHERKIQKEAKKNTQEFKENKKLIVIIFITTFII
                     QFGTFGVMPILSLYVEQIYQGENLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKV
                     IFSALIFCGICFYLQSLATNVYALIFVRLLIGIGLGGLLPCVNALLKKGVSAKNLSLV
                     FGFNQTCQFLGNFCGAFGGGLITAHFSVELVFAFICCIFILNAIIFLIFERNYIFSNQ
                     GL"
     gene            26889..27545
                     /locus_tag="ACJE1S_000613"
     CDS             26889..27545
                     /locus_tag="ACJE1S_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HGG0806180.1"
                     /translation="MELILLSLIVILLVFVIIKQFKNSSKIEEKDIHISNDITQLKSI
                     GELSVFQVFSKEIVTKKDSAFNGIWKSILGWSLSERQIALIFEFEITFLYDLRDKNFE
                     IIVLDNDHYKIIMPECKYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGLSFSENDKNK
                     LIREAKEEVKELSLNLIRNLESKIHKSARDTLEAIAKGFGAKKVEFEFKDNTQKLDIN
                     "
     gene            complement(27542..27751)
                     /locus_tag="ACJE1S_000614"
     CDS             complement(27542..27751)
                     /locus_tag="ACJE1S_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxymuconate tautomerase family protein"
                     /protein_id="HGG0806181.1"
                     /translation="MPFVNIRITKENGEPTSEQKQELIAGVTDLLAKVLNKNKASTVV
                     IIDEIDTDNYGLGGKSITQVRKEKS"
BASE COUNT         9717 a         3639 c         5150 g         9266 t
ORIGIN      
        1 tttttatatt attttataat gcgatttttt ttagttaaaa aataaaattc tagaaaatta
       61 aaataaatca tttttgcata tttaagattt aaagttatgg ataagttttg gttgcgaagg
      121 ggagatttga actcccgacc ttcgggttat gagcccgacg agctaaccac tgctctactt
      181 cgcgacaatc aaatttgtgt ttgaagttta gttcgtggat ggggtaaagg gattcgaacc
      241 cctgaatgac aggaccaaaa cctgttgcct taccgcttgg cgatacccca atatttaatt
      301 tttaaaaagt aaaaacgaga ttataatcaa ttttaattta tttgtcaagc aaatgaagtt
      361 ataattttaa aaaaaataat attttaagga ttataaatga agtttgtaag cattgaacaa
      421 gcaattaagg atttacaaga aggaaaaatg cttgtaatgg tagatgcaga agatagagaa
      481 aatgaaggag atttgatttt tccagctcaa tttagcacta aagaaaaagt aaattttatg
      541 ataaaagaag ctagaggggt tgtgtgtgta gcactcgcag aagaacttgc aagaaaattt
      601 gaacttcctt tgatggtgcc caaaaatact tcaaatcatg aaacagcctt tacaatcaca
      661 gtggatgcaa aagatgcaac tacaggtgta agtgcttatg aaagagatat gacgataaaa
      721 atttttgcag acgataatgc aaaagcgagt gattttgtac gccctggaca tataaatcct
      781 ttgatagcca aaaaaggcgg tgttttagag cgcacaggcc atacagaagg aacggttgat
      841 ctttgtcatt tagcagggct taaacaagct tgcgtgattt gtgagattgt taaagatgat
      901 ggagatatgg caagaagaag tgatttggaa gaattttgca ctaagcataa tctaaacatg
      961 atagctgttt ctgatatcat agaatatcgc ttaaaaaatg aaagtcttat taaattacaa
     1021 gaaaaaagtg atgctatttt agcaggtttt aaagcacaaa aattcatttt tacagatcat
     1081 aataatgctc agcatatagc atttgcattt aaagaaattc aaaaatgtga aaatgttaaa
     1141 tttcatatta gcggaagtga ttttgagctt ttaacctctg ataaattttc taaattatta
     1201 gatcaaattc gttttttgag tgaaaatgga ggagtgatag tttttatgca gggtgaaaaa
     1261 tcaagtgtaa ctcaatttaa aaattatggt ataggtgcgc aaattttaag atattttggc
     1321 atagaagaga ttaagcttat gtcgcaaagt tgtgataagg attatatagg cttaaaaggc
     1381 tttggtttaa atcttaaaat ttgtaatttt aactaaaata aaaggatata taatgaattt
     1441 aaaagagcag atattaaatg atatcaaaga agcgatgaag caaaaagatg attttaaacg
     1501 cgatacttta agaacgctaa atgccgcgtt taaacaggtc gaagtagatg aaagaataga
     1561 gctaagtgat gaaagaattt taaaaattat cgcaagcgag attaaaaagc gcaaagatgc
     1621 tatcgagctt tattctaaag gtggaagaga ggatttggca caaaaagaac aaaaagaaat
     1681 agcacttttt gaaagttatt tacctcagca attaagcgat gaggaattgc aagcagcttt
     1741 aaaagaaatg attgcaaatt taggggttag ttctttaaaa gatcaaggtt tggtgatgaa
     1801 agaagcaaag gctaaatttg gagcaagggt ggatggaaaa agattaaatg taacacttag
     1861 agagctttta aattaaaatt ttcaaacttt tttatatttt atctaaataa aagattgaat
     1921 tattgttata atttgatttt caaaggaggc cttatgagaa aaataagcgg ttcggcaatg
     1981 atttgcgaag ctttaaaaga agagaatgtt aagatagttt ttggttatcc tggtggagca
     2041 gccttaaata tttatgatga aatttatttg caaaagtatt ttaagcatat tttggtgcgt
     2101 catgagcaag ctgctgtaca tgcagccgat gcttatgcaa gaatgagcgg tgaagtgggt
     2161 gtagctgttg ttacaagcgg acctggtttt actaatacca tcacaggact tgcgacagct
     2221 tatagtgatt ctataccttt ggttttgatt tcaggtcaag ttgcaaattc attaataggc
     2281 accgatgctt ttcaagaaat tgatgcggta ggaatttctc gcccctgtgt aaaacataat
     2341 tatttagtca cttgcataga agaatttcca agaatattaa aagaggcttt ttacatagca
     2401 aaaagtggaa gaaaaggtcc tgtgcatatt gatgtaccaa aagatgtaag tgcagccctt
     2461 ggtatttggg attatccaaa agaaatttca atgaaaactt ataagcctat ttataaagga
     2521 aattcaaaac aaattaaaaa attggctgaa aatttagaag aagctaagcg tcctcttttt
     2581 taccttggag gcggatgtat agcatcaaat gcggctaatg agatcagaga acttgttaag
     2641 attactcaaa ttccagccgt tgaaacctta atggctcttg gaactttaag aagtgatgat
     2701 gagctaaatc ttaaaatggc aggaatgcat ggaagttata cagctaatat ggctttgagt
     2761 gaatgtgatt tattggtagc aataggcgcg cgttttgatg ataggattac aggtaaaaca
     2821 agtgaatttg ccaagcattc taaaatagtg catattgata tagatccaag ttctatttct
     2881 aagattatca atgcgcattt tcctatagtt ggagatatta aagaagttgt taaagagctt
     2941 ttggaagaat tgaaaaaaaa tcaatttaag tcaaatatcc atgagtggag gcaaactctt
     3001 aagcgttatg atgagcttta tcctttagct tatgaagata gcgatgaggt tttaaaacct
     3061 caatgggtaa tacaagaatg tgcaaaactt gctccagatg caaggataat cactgatgta
     3121 ggacaacatc aaatgtgggt tgcacaattt tatcctttta attacccaag acagcttgca
     3181 accagtggcg gacaaggaac gatggggtat tctttacctg ctgctttggg tgcaaagctt
     3241 gcggtaggag aagaagttgt tataaatttt gtgggtgatg gttctgtttt aatgaatatt
     3301 caagaactga tgacagctta tgaaaatggt attaaaacca taaatattat tttaaacaat
     3361 tcattcttgg gaatggttcg ccaatggcaa agcatgtttt atgaagagca tttttcggct
     3421 acagatttaa gcttgcaagc agattttata aagatagctg aaggttttgg atgtgaagga
     3481 tataatataa aaacaaaaga tgagtttcgc acagcattca agcaagcttt agagtccaat
     3541 aaaacaagct tgcttaacgt atttatagat cgctttgaag atgtgcttcc tatggtgcca
     3601 gcgggtgggg ctatttataa tatgatttta ccaaaattaa aggataagca atgagacgtg
     3661 ttttatcggt tatagtttta aatgaacatg gtgtgctttc tcgtatcgta ggactttttt
     3721 caggtagggg atataatatc gatagcttaa ccgtcgctcc tttactaggt ggagaatttt
     3781 ctcgtatcaa tatagttact tttggagatg agcgtgtttt tgagcaaata gtaaagcagt
     3841 tgcataaact tatacctact tataaggtaa tagaaagaga tgaatttata gaaaaagaaa
     3901 tggcgcttgt aaaaattcca ctcagtgaaa atttaggtgg acttgatgcc gttttgaaag
     3961 cttataatgg tactattgca aatagcaatg aaaattttct tttcttgctt gtagctgatg
     4021 atacaaatcg tatagaaaat tttctaaaaa caattaaaaa atacaatcct agcgacattg
     4081 ttcgcagtgg atcggtttta atggagctta aatgagatta aaagaaatag cggaattttt
     4141 aagtttagaa tacgaaggcg aagatatcga aataacggct ttaaattctt tattgagggc
     4201 gaattttacc gagcttactt attgtgatgg tgaaagaaat attaaagata tacccaacac
     4261 aggagcagca gcgattttgg ttgctaaaga atatgaaaat ttagtgccta aagatacaaa
     4321 agctctcatt actcaaagtc cgcatttgtg ttttgctttt ttgagtaaaa tttttgctaa
     4381 acctttattt agcaacgcaa aagaaaaagt tcaaaatata gcaaaaagtg caaaaatcat
     4441 gccaaatgtt tatataggca ataatgtcaa tataggcgaa aatgttgtca ttatggcagg
     4501 agcttatata ggagataatg ttagcatagg cgaagaaagc attatccatc ctaatgtggt
     4561 gatttataat gatagcaaaa ttggcaaaaa atgtcatcta cttgcaaatt gcgtaatagg
     4621 aagcgatgga tttggttatg cgcacaataa aaatggagag cattataaaa tctatcacaa
     4681 tggtaatgtt atcttagaag attttgttga aataggagct tgcacaacaa tagatagagc
     4741 agtgtttgat agcactatca ttaaagcagg aacaaaagta gataatcttg tccaaatagg
     4801 tcataattgc gatataggac aaaattgcat tatcgttgca caaactggaa tttcgggttc
     4861 aagtgagctt ggacgcaatg tggttatggg tggacaaagt gcaacgagcg gccatttaag
     4921 aataggggat tttagcacta ttgcagcacg cggtggtgtg agtaaaaatc ttgaaggcgg
     4981 tagggtttat gggggttttc ctataatgct tcaaaaagat tggcttaaac ttcaagcaaa
     5041 aattgctatg aaatttaaag aataaattta taaaataagc atagcatcgc cataagagta
     5101 aaaacgatat ttttctttta tggcaatatc ataaagctta agacaatttt gcctgcctat
     5161 aaatgctgaa accaacataa tcagagttga ttttggtaga tgaaaattag ttaaaagata
     5221 gtcctgtctt aagggcgggt tgtgaggatg caaaaaaaga tcgcaaaagc cttggttttg
     5281 tttggttctt gcgtagtatt ctatagtcct tgttactgta gtgcctacgc ctaaaatctt
     5341 tttttgggaa tcaatcactt cacatgcctt tttaggaata tcaaaaaatt cactatgtat
     5401 tttgtgattt tctaaatttt cacattctac acttttaaaa gttcctgcac caacatgcaa
     5461 agttaaatga taaatttcat gtcttttttt taaattctca agcatatttt cactaaaatg
     5521 taagctagct gtaggagctg ctactgcccc taaattttta gcaaaaatac tttgataatc
     5581 ttctaaatca cttttttcat cacttctttt gatataggga ggcaagggca catgtcctat
     5641 tgtatcaagg agttcataaa gcttgaaggt atttaaaact tcatcatttt gaaaaaattg
     5701 caccttgcgt aagccatcat ctaaaagttc tataaccttg gcttttaaat tttgttcaaa
     5761 agataaaatt tcatcttttt taacacgccc tttaatttgt gctaaaaaaa gcgaatcttg
     5821 tgaatctaaa cagggttgat gtaagaaaag ttctattttt ccaccgcttg atttatttcc
     5881 ataaattctt gctttaatca ccttagtatc attaaaaaag agagcacaat caggtaagaa
     5941 atcttgtaaa tttttaaaag tagtatgaga aatttgatta tttttttgct caaaaactaa
     6001 gagtttagca tcttctttag gatgcacagg ataagtagct ataagttcat tgggtaaggt
     6061 ataatcatag cttgaaagaa gtaaatcttt catttatcgc tttcttcttt ttcttcatct
     6121 tttggagcag gatttacttt ttgaacgatt aaaatagaaa gtccataaag tccgcaaagt
     6181 ggcccagcca ttaaaaattg agataagaca tcaggtggag tcataaaggc tgaaaataca
     6241 aagatagcta aaacagctat gcgaaaatgg cgttttaaga aactatcatc aataagtcca
     6301 attttagcaa agaaaaatgc tataacaggc atttcaaaag ccaagccaaa agcaacaact
     6361 acttttgtaa aaaagtccac ataagttcct atggtgatta caggattaaa atcttcactt
     6421 aaaccaaaat tgattaaaaa tttaaaagcc aaaggcacta caataaaata gcaaaagcaa
     6481 gcccctaaag caaacataat gcttgcaaag cttacaaaag gtactacaag acgcttttca
     6541 ttatcataaa gacctggagc tacaaatttc caaaactgcc aaaaaataac aggtaaagaa
     6601 aagataaaag cagcaaaaaa gcttaccttc atagctgtaa ataaagcctc ttgaacttcg
     6661 ataacattga catgtttagc tacttcgggt aaagcttgaa taagaggtgc ttttaataca
     6721 tctaagatat agctgcgaaa agcaaaacat actataaaca ttacaatcat gcaagcaacg
     6781 ctaataaaaa gacgctttct aagttctatt aaatggggtc ttaattcttc aaacatttat
     6841 ttttctactt tttcttgatt ttcaaatgga ttgagtttgg gtttttgatt ttcatttgga
     6901 ttttgttcgt ttgggctagg ggtggaattt tctctgctat caaaagtcaa atccacttta
     6961 gttttatcca aaatatctct ttttaaatca tcaaattctt caaaactaag ttttttacgg
     7021 atgttttcat ttgcacttga aaattcatct ttgtattttt tagcttcttc ctttaaatca
     7081 ttgatacgaa cttctttttc tatgcttgat tttgcatcat cgatattgcg ttttaaagcc
     7141 tttaaaattt ttgctatttg cactatggct tcaggaagtt tatcaggccc taaaactaaa
     7201 attgctacta ttaaaattac aataatttca ccaaaactca taaacaatac tcttaaaaat
     7261 ttgaaatttt ataaaaggaa cattttactt aaaaaagttg aatttaagat gagagatata
     7321 aggcaagctc atcgctaatt aaaaaattaa gattataata acgccctttt tcaaatttga
     7381 gctttttttc tcttacaagc aaattagcct tttctttttg aattttactt aatttgcatt
     7441 ctttaatacc cactatactt cttagtccta aaaataaatg ttctaaattc aaatcttctt
     7501 gatttagttt ttcaacatct ctaaatatag ggttttgaag ataggatttt aaatttttag
     7561 ccgtataaaa acgctcattt ttatagcaac ttaccgcact caaaccacaa cctagataat
     7621 ccaaaccctt ccagtaggct aaattatgtt tgcaaatttg ggcattattt ttagcaaaat
     7681 tgctgatttc gtattgtaaa aatccaagat tttgaagttc ttggatgaaa aatttcatta
     7741 aatagggtgc gtttttttta aaatgttcct tttttgcaaa agcactcagt ggttctatgg
     7801 taagattata agcacttaga tgagtgatta aatttttaat ttgttttaat tgttcaagtt
     7861 caaattcaag cattttttta tcgtctaatt ttgtatcata aatcaagtct aaattaatct
     7921 ttttaaatcc caatttgttc acattttcta atgctttaaa aatcattttt tgatcgtgaa
     7981 ttcttcctaa aaattccagc tttttaggat gaaagctttg tgctccaaaa gagatacgat
     8041 taagccctaa atttttcatt gttttaagcc attctatatc ggctgaattg ggattggcct
     8101 cgcttgaaaa ttctatattt ttacttaaaa aaggttctaa aagtgttaag atcatttcaa
     8161 aattttttgc actaacagca cttggggtgc ctcctcctat aaagagggtt ttaatgctgt
     8221 tttttttgat atttaatttt tgcaagtgaa aagaaatatc ttcatataaa gcctcaaaat
     8281 acctattttc ataatcatgt ttttttagac tcgtaaaagc acaataatgg catttgcttt
     8341 cgcaaaaagg gatatgaata tataaatgca taaaaacctt aaaatttata atgttatttt
     8401 cttattttaa tgaaattttg atttcattta ggttaaaatt ataagcttaa aattgaagga
     8461 aaaaagtgga aaaagaaaaa aaatatagac ccaatgtcgc tgctattgtt ttatcaagcg
     8521 cttatccttt tgagtgtaag ctttttatag ctaaaagaag cgatatggat aatatttggc
     8581 agtttccaca aggtggtatc gatgagggag aagaccctaa aagtgctgta ttaagagagc
     8641 ttaaagaaga gattggcaca gacgaagtgg aaatcatagc tgagcaccct gaatggttga
     8701 gttatgactt tccagaaaag gttgctaaaa aaatgtatcc ttatgatgga caaagccaaa
     8761 aatatttttt agtacgatta aaacatggcg ctaaaattaa tattaataca aaacatcctg
     8821 aatttgatgc ttatcaattt gtcggagtaa aacaagtgtt tgaaatcata aatcatttca
     8881 aaagaaatat ttatgttaaa gttattaaat attttgaaga gaaaggttat atttaatgct
     8941 tatagttcaa aaatatggcg gaacaagtgt cggcacttta gaacgcattg atgcagtagc
     9001 agagcgtgtc ataaaaagtg caaaagaggg acatcaactt gtggttgtag tttcagcgat
     9061 gagcggagtt acaaatactt taatagagca agcagaatat tttagtaaaa atcctaatgg
     9121 caaagatatg gatatgcttt taagtagtgg tgagcgcgta acgagtgctt tattgtctat
     9181 tgcactaaat gaaaggggat atccttctct tgctttttca ggaagaaagg caggaattat
     9241 tacagatagc gtttctacaa aggctagaat ttcttatatc gacactcaag caatcaccaa
     9301 ggctttaaat gaaggaaaga tagttgttgt agcaggcttt caaggagttg ataaagaggg
     9361 cgatgttaca actttagggc gtggcggaag tgatttgagt gcggttgctg ttgcgggagc
     9421 tcttaaggcg gatttatgtg aaatttatac cgatgtggat ggagtttata ctacagatcc
     9481 aaggattgaa ccaaaggcaa aaaaacttga taaaatttct tatgaagaaa tgcttgaact
     9541 tgctagtttg ggggctaagg ttttacaaaa tcgctcggtt gaacttgcaa aaaaattaaa
     9601 tgtaaaatta gttactagaa gtagttttaa tgataatgag ggtacaatga taacaaaaga
     9661 agatggaatg gaacaagctt tagttagcgg tattgcttta gatagaaatc aagcaagagt
     9721 aactttaaga aatatagaag ataaaccagg gattgcagct gaaatttttt ctgttttagc
     9781 ggatgaaaat atcaatgtag atatgatcat acaaaatgtt ggggtagatg gagctacaaa
     9841 tttaggattt accgtgcctc aaaacgagct tgatttggca aaaaatgcta tgcagaaaat
     9901 tttaggttct aagacaacta tagaaagtga tagtgctgtg gttaaggttt ctatagtggg
     9961 cgtgggtatg aaatcacatt cgggtgtagc aagtaaagcc tttaaagctt tggcggatga
    10021 gggtattaat ataggtatga tttctacaag cgagattaaa atttcaatga ttgtacatga
    10081 aaaatatggc gagcttgcgg taagagcctt gcatgagtgc tatggacttg ataaataaat
    10141 gagcgatttt ttaagtttta cacttgaaaa tatccgcaat ggcggaacat ttatggcttg
    10201 gatggagtcc cgtcgtttag aatgggctcc tttaatggcc gcaagattaa gatacctttt
    10261 agaggggcga acctttgttt taatgtgtga tgaacaaagg gcttggtatg aagaatactt
    10321 tttagcaaat ataaattcca aaactactcg ccccatgctt ccttttgtgt ctttaaaatc
    10381 tttatgtaaa aaaaagatac aaaatatcga agatatagcc ttgcttaatg atttacttga
    10441 tatttcgttt cctaatggct ttatttattt ttatatagga agtgcaagcg ataagaaatc
    10501 attaatcgct aaatcacgcg acgatagtct tttatggctt tttgatgagc aattgcaaga
    10561 tagtttttat ttgaattcca aagataaaga tttggatgtc aagcttatca ctctttataa
    10621 actttttgat acgagtttgg atgcgatttt attttccaaa gtgagtcttt agtgtttgta
    10681 agtaaaatta tcatcactga tgattttgac ggtattagag ctgaactttt aaaacaattt
    10741 catcctaatt ctttgcgttt tatacctaaa gaagttgcaa gtgagttttt aatcgatgat
    10801 gctaaggcag ttgaaaagga aagttatatc gcagaaacaa gtgaaaaaat cattgtttta
    10861 atggcgaatt cttttaggat agaagctcaa aattttttac tcaagcttct tgaagagcca
    10921 ccaaaaaata tcaaatttct catcgtagtt ccttctaaaa atttactttt gcccactata
    10981 aaatcgcgtc ttatttgtga aaaacgcaac aaaataaagg ctaaaaatac tttaaattta
    11041 gaacttaata aaatggattt aaagactttg tttgagtttt tacaagaaaa tgaaaattta
    11101 gataaagcag aattaatgga aaaaatcgca ctgattgcag aagaaagtgt taaatttaaa
    11161 gattttaatg tcgatgagct tgaatttttt tatgaaagct atgagcttgc aaaattaaat
    11221 tccaaaagct ctttgatact agctacgctt ttattaaatt attatacaaa gaatgaaaaa
    11281 tgaaattttt taaaatcaat ccaaacactg attttaactt actttgctct tttataaatc
    11341 ctcataaaat ggggcaaaaa attatgagtg aaaaaactca aattcatttt attttgatta
    11401 aagatataac tactcctgcg gcaaatattt taaaacaaga tgccttaaga gtgggagctg
    11461 agcttataac acacaaggaa gttattacag ctaaaattac acattctaat acacttttaa
    11521 tggccacaaa agaacaaatt caaaaactta taaacaaaga aaaacttcaa gattttgggc
    11581 ttaaaaattt agctaggttt ttagaaaatg gtttttcaaa accaaagcaa gcagagctta
    11641 tggcggttat aaatgtcaat gaagatagtt ttaatgctga ttctagggtg agttataaag
    11701 attttgaaga aagattaaat gaaattttgg ccttaaatcc cgagtatatt gatataggag
    11761 cggtaagctc taggccaaaa agcgtgtatt gtggcaagga agaagagttt agaagactta
    11821 aaaatgtgtt ggatttaatt tatgataaaa attattatga aaaagccatt tttagtttgg
    11881 atagttttga tgaatattgc ttagaatacg ctttaaacaa aggctttaaa tttatcaatg
    11941 atatcagcag cttaagaaat ctgaatttag ctaaacttgc aagcaaatac aatgcaaaat
    12001 actgccttat gcatatgcaa aatgatcctt taaccatgca agatgatcca agatatgatg
    12061 atttgcttga tgaaatgagt agttttttta aagaaaaact tgaaatttta gatactttag
    12121 gagtgaaaga aagcatttta gatgtgggaa ttggctttgg caaaagtgca gaacacaata
    12181 tgattttaat caagcattta gaacattttt tgcaatttaa aaagcccttg cttataggag
    12241 caagtcgcaa aagtgtgatc aatgcgtatt atgaaagtga agttaaagat cgcttagcgg
    12301 ggactttgta tttgcattta aaggcttttg aaaatggcgc gagcattata agggtgcatg
    12361 atttatacga acataaacag ctttttgcaa tggcaaatgc gatgcaaagc ataggagttt
    12421 aaatgacaaa aaaagagtat ttagaaaaag ttgccttggc tgcttcttgg atgagggcgt
    12481 attatgaaaa agatgaaccc ttggctagcg atgaagaata cgatgcttta atcagagaat
    12541 taagagtttt tgaagaacaa aataaagatg aaatttcaaa agactctcca acgcaaaaaa
    12601 tagctcctac tatacaaagc gagtttaaaa aaatagctca tttaaagcgt atgtggtcga
    12661 tggaagatgt gtttgatgag agtgagctta gggcttgggc aaaacgcgca aaatgtgaaa
    12721 aaaacttttt tatagagcct aaatttgatg gagcgagttt aaatttgctt tatgaaaatg
    12781 gtaaattagt aagcggcgcc actagaggcg atggcgaagt gggtgaggat ataacgctta
    12841 atgtgcttga aatcgacaat atcccaaaaa ctataaatta taaagaaaag atagaaattc
    12901 gtggagaagt ggtgatttta aaagatgatt ttgagaaaat caacgaaaaa agagcccttt
    12961 taaatcaaag tttatttgcc aatccacgca atgctgcaag tgggagttta aggcagcttg
    13021 atacaagtat cactaaagaa agaaatttga aattttatcc ttggggagta ggggaaaata
    13081 ccttaaattt taccaagcac agcgaagtga tgcaatttat cagagagctt ggttttttaa
    13141 aggatgattt tattaagctt tgtgctaatt tagacgaagt tttaaaagct tataacgagc
    13201 ttttaagcct aagagatcaa aagcctatga tgatggatgg aatggtggta agagttgatg
    13261 atcttgcact ttgcaaagag ctaggctata cggtaaaatt tccaaaattt atggcagctt
    13321 ttaaatttcc cgcacttgaa aaaaccacgc gtttaatagg agtaaattta caagtaggaa
    13381 gaagcggagt gatcactcct gtggcggttt tagaacctgt aaatttagat ggggttgtag
    13441 taaaatcagc cacacttcat aattttgatg agattgcaag acttgatgtt aaaatcaatg
    13501 attttgtaag cgtgataaga agtggtgatg ttatccctaa aatcactaag gtttttaaag
    13561 agcgtagaga aggtttagag atggaaattt cacgccctaa gctttgtcct acttgtcaaa
    13621 gtgagctttt ggatgaagga actttaataa aatgtcaaaa tattgattgt gaggatagac
    13681 ttgtaaattc tatcattcat tttgtttcta aaaaatgtct taatatcgac ggacttggag
    13741 aaaatatagt cgagcttttg tttaaagaga aaaaaataaa cacacttgag agtatttttc
    13801 atcttaaatt tagtgatttt gaaggcttgg aaggttttaa agaaaaaaag atcaataata
    13861 ttttaaatgc cattgagcaa gcaagggatt gtgagctttt tcgttttatt accgccttgg
    13921 ggatcgagca tattggagaa gtggctgcta aaaagctagc tttaagtttt ggtaaagaat
    13981 ggcataaaca aagtttagaa gcttatgcaa atttagaagg ttttggtgag caaatggctc
    14041 tttctttgtg tgagttttct cgtgtaaata gtgcaagaat tgatgagttt tataagcttt
    14101 taaatttaaa agagcaaaag gtgcaaattc aagaagatag tgttattttt ggcaagactt
    14161 tcgtgatcac aggcgcgctt tcacgcccta gagatgagtt taaaaatcta atagaaagtc
    14221 ttggaggtaa ggttagtgga tcggtttcta aaaagactga ttatgtgctt tttggtcaag
    14281 aagcaggttc taaactcgac aaggctcaag agctgggtgt aaaatgtatt gatgagaatg
    14341 aattcaatga gcttattgaa aaataatatt cagctatttg ttttattgag tatttttgca
    14401 tttttatttt tttggcaaaa atttgcttgg gtttcgcttt ttttaatccc tattttttta
    14461 gcattttttt tggaattttt ttatttttta aggcttagaa aaaatatcat aaaagaagca
    14521 acgatgatta aagatagttt gatttatcgt gtgagtgcgg gagattttta tatctatagc
    14581 ttgagttttt ttatggcctt gtttgcactt gcttctttgt ttttaaattt gatcagtttt
    14641 gaaaaacaag atggattttt tttgtttgta ctcttgcctt tatttttatt ttttttcaag
    14701 caaaaacttc agttgcagtt tttagataat gcttataatg attttagaat aatcatttta
    14761 tcaagcttga ttttagcttt gttatatgcg atttttaatg gggtggtaaa tcctatacaa
    14821 agttttaatc ttgaagattt taatcaaagt attatttatt ataaaaactc aaagtttttt
    14881 atttttgatt taatttctca aattttaaca cttataaatg ctttaaaaga atatttttta
    14941 tattctttgg ggcttttttg gtttagggtt ttaaatttta tttttgattt tattaatttt
    15001 tttatttttt gctcctttgt ggcctatctt tataattttg cttttaaggc aaaaaagaaa
    15061 acttatgttt ttgtcttttc attttttata actctagctt cattttttat catagaggat
    15121 aaaaaccaaa atccaaaagc ttatcaaaaa gagcttgttt tgatgatgaa taatctttct
    15181 tttttaaaag agcaaaattt aagtatgctt caaaatgata aagatagact agttaaaaat
    15241 ttaaaacaag tgcaagaact tttggataaa aatgcctttg agataggaat ttggtggttt
    15301 tccaaagaga aagaagaatt gcaaaaagcc ttaaatgaaa gtcttcaatg agatatgata
    15361 tttttgtagc aaagcgttta aatcttagca gaaataaagc tttggaattg atagaaaatg
    15421 aagaaatttt acttaattcc aagccttata aagcttcttt tgatgtgcaa aatttgctta
    15481 aaaataagat agcagatcaa gaagagcttt taaattctaa agaattaaat ttagagcttt
    15541 taggcgagct ttatgtttct cgcgcggctt ttaagctcaa atatttttta gaaaatcata
    15601 atatcaatat agcaaataaa acctgccttg atataggctc aagtacgggt ggttttgtgc
    15661 aaattttatt agaacacaag gctttaaaag taagtgcttt agatgtgggt gatagtcaac
    15721 tccatcctag tttacgcgat gataaaagga ttgaagttat tgaaaatacg gatttaagaa
    15781 cttttaaaag cgagcaaaaa tttgatttta ttacttgtga tgtcagtttt atttctttaa
    15841 ctcatttgct ttcgtatatc gataatttag ctttaaaaga tatagttttg ctttttaagc
    15901 ctcaatttga agttggcaag caagcaaaaa gagataaaaa aggtgtttta aaagatgaaa
    15961 aggctgtgct taaagctatg agagaatttg aaaatgcttg tgcgcgttta ggttggatct
    16021 tgcaatgttg tgaagagtct aaaatcaaag gaaaagaggg taatattgaa tatttttact
    16081 actacgctaa aaaatgatat taaaacctta gccataggat gttttgatgg agttcattta
    16141 gggcataaaa agcttataga atgcttagat gattcaggag ctcttttgat tatcgataaa
    16201 tttaagggta aaaaactttg caccaatcaa gacaaagcat tcttagctca aaaagagatc
    16261 atagaacttg attttgaaag catcaaggct ttagatggta aggatttttt acaagcctta
    16321 aaagaggaat ttgtaaattt agagcgtata gttgtaggtt ttgatttttc ttttggaaaa
    16381 aatagaagtt ataaggcaaa agatatagaa gcacttagtg ggattaaaac aacgattata
    16441 gatgaattta gattagaggg agtgggcgtt catgcaagct tgattaaaga gtatttagca
    16501 caaggcgata tcaaaaaggc aaattctttc ttggggcgaa attatgcaat caaaggtaag
    16561 cttatcaagg gtcaaggact tggctcaaaa gaactttttg caactttaaa tttagaatgc
    16621 gaggaatatt ttttacctaa aaatggcgtt tatgctagca tcgtgagttt tcataataaa
    16681 cgctataaga gtgtaagttt tgtgggtgtg cgctctagcg atatgcaatt tgccatagaa
    16741 agtcatatta tagaaaaatt tgatgaaagc ttggctatag gggaagtttt agagcttgaa
    16801 tttgtagaat ttctaagaga aaatcaaaaa tttaatgatc ttgcccaact taaagaacaa
    16861 atttcaaaag atataaatca agctaaagcg tgtttaggat agagaatgaa agatgaactt
    16921 tttaaagaaa aattaaccaa acaatttgaa tttgataaga gtgtcgcaag tgtttttgat
    16981 gatatgatta atcgctctgt gcctttttat agggaaaatt tagaactttg tgcaaatttg
    17041 ataaaaaaat tgactaaaga gggagcaaag gtttgtgatt tgggttgttc tagtgcgaat
    17101 tttttaattt ttttagccag cttaagaaaa gatcttaagc tttttggtgc ggataatgca
    17161 ccttctatgc ttgaaatcgc caaatcaaaa gcacaagctt atggcttaaa tatagaattt
    17221 tttgaagcga atttgtgtga ttttgttttt tttcaaagtg atgtatttgt agctaattat
    17281 actttgcaat tcatccgtcc gcctaaaaga caagaacttg ttaatgaaat ttataagaat
    17341 ttaaacaaag gtggtatttt tatcatgagt gaaaaaattc tttatgaaga tgcttttttg
    17401 tctaaaaata tgatagaact ttatgcagat tataaagaaa gacaaggtta ttctaaaatc
    17461 gaaattgcag ccaaaaggga ggctttggaa aatgttctta tcccttatag tgaaaaagaa
    17521 aatttagata tgcttaagaa tgcaggattt gaaaaaatag aaagtgtttt taagtgggtt
    17581 aattttgaaa cctttatagc ctttaaataa aaattatctt gtttgtgtat catggccttc
    17641 atcccaatct tcttttggga tagcaacgct atgagcattt acacaatctt gactgatgat
    17701 agatttcaaa cgacattcat cacttctttt tttggcttct tcgggatgag ctttgtagta
    17761 ttctacactt ttggtttgtt cacaagctgt aaaaaataaa caaataaggg taagtagtat
    17821 tgctttattc atagtatttt ccttaaaaag cataattaaa cttttatcac gcttcttttt
    17881 atcttagcaa atttttataa atacaattca ttatttttcc tcattataag aaaaaatggg
    17941 taaggaccat tggtatttga tcgctaaaag cctagctgta actcctacaa atagcgttac
    18001 aagcgtgcaa attaaagcat gcagttgaag ataaaccatt aaagtataat aaatcgcccc
    18061 tgctatgatt gcgattcctg cataaatttc tttttggaaa actaaaggaa ttctcatgca
    18121 taaaatatct cttaaaattc caccaaaaac acctgtaatc actgctgcag agattgcgat
    18181 gataaagcca tggttttgtt ctattgcaat ttgtgcgcca agtatgctaa agactacaag
    18241 tcctatggca tcaagcgtta aaaataaact ttctaatctg ctaacaatgc gtggaatttt
    18301 agtggcaaca agagcacaaa ggcaaattaa aacaatatat tcaggatgtt taacccaagt
    18361 aagtggataa tgacctaaaa gcacatcgcg tatgcttcca cctcctatgg cagttactaa
    18421 ggctatgaaa attactccaa aaagatccat tttatgtctg cctgcagcca aggcacctgt
    18481 cataccctct gctgaaattc ctataatgta aagtatggtt atggttaaag cactgatttc
    18541 cattcatagc ctttagaatt tattgcaaga aattttataa tcattgattt cttcgctctg
    18601 gatattgtta ttgggtactt cataacattc ttcaaaccga gaagttttga taatcttaac
    18661 ataagaactc ggtatagcaa tgccattttt aataaattta ggatttttac cataaagtat
    18721 tagatttagc acttcaacgc tttggaattt aaaagcaaga cttctttctc tttgttcgat
    18781 ttcattccaa accgttgcat taacttgtgc attttgtgga gtgatattac tcatcaaaaa
    18841 aaccgatgtt tgtgctgctt tactaaagcg aaaagaagca tttgaggcta tatgtcctcg
    18901 ggtataacca ctatttttat aatcactcca agtactgcgg tattttttag ggatatttgt
    18961 gtcatcttca aagcgagctc gttttttgat ctgtttttct tttagattgg acgcttcgac
    19021 tttataggct acggctttag tgcctttgag tttataatca taacaattgg tataaaaaaa
    19081 tttatccaaa acaacagagc aatttaaagg attaaaataa ggcgcaaaat ctttatcggg
    19141 cttataagct tctaaagcaa aaacatgaag tgtaaatgct aataaaaaga tgataagttt
    19201 cattcaagtt ccttgtcttt acttttgcaa agatggttta aaaaacattc tttacataga
    19261 ggttttttag ccttgcaggt atagcgtcca aaaagcacca tggcttgatg aagatagtta
    19321 agattgtctt taaatatgcg tgttaaatcc tcttcagtcg cttcaggagt cttagccttg
    19381 ctaagtccta agcggtgaga aacacgaaaa acatgagtat ctactgccat gcagtttgca
    19441 ccacaccatt cgatcaaaac cacatgggct gttttttgtc ctactcctgc taaggatttt
    19501 aatttttctt catccagtgg aatttcggcg ttgaaatttt cacggactga ttgagccatt
    19561 ttgatgagat tttgggcttt gttattataa aaagaacaac tttgtatata ggttttaagg
    19621 cttgataaat ttgcatttgc aagacttgtg atatcaggat aagctttaaa aagctcaggg
    19681 gtgataagat taaccctttt atcggtgcat tgtgcagaaa gcatcacaca gactaaaagt
    19741 tcatagagat ttgaaaactt taattctgta gtaggcttat caaaatgttt taaaaaaagt
    19801 tctttgattt ctgaatttct tttcattttt ttattttaat taattagctt taaaccaagt
    19861 tgagatataa ttgattttaa tctattttat taaaaaagga agtctaaaat gagaaaagtt
    19921 tctttaattg ccgcagcttt aattgcaggt gtaactttaa atttaaatgc agctactata
    19981 gctactgtaa atggtaaaaa tataagcgat actgaagtga gtgaattttt tgcaccgatg
    20041 cttagaggag aggattttaa aagcttgcct gatcatcaaa aaaaggctct tttgcaacaa
    20101 tacatcatgc aagatttgat actacaagat gctaaaaaac aaaatttaga aaaagatcct
    20161 ctttataaaa aagaattaga acgcgcaaaa gatagcatac ttgttaatgt ttatcaagaa
    20221 aaaattctta attctattaa agttgattct tctaaagtta aagcatttta cgaacaaaat
    20281 aaagaaaaat atatcaaacc tgctgcagtt caagctaagc acattttagt atctagcgaa
    20341 caagaagcta aagatatcat taaagaactc aaaggtttaa aaggtaaagc tttagatgat
    20401 aaattcagcc agcttgctca agaaaaatca atcgatccag gttcaaaaaa tcaaggtgga
    20461 gaattaggtt ggtttgatca atcaacaatg gtaaaaccat tcactgacgc agcatttgca
    20521 cttaaaaatg gcaccattac aaccactcct gtaaaaacaa attttggcta tcatgtaatc
    20581 ttaaaagaaa attctcgtgc aaaagaacaa atcaaatttg atgatgttaa aaaaggcatt
    20641 gaaaatggtt tgaaatttga agaatttaaa aaagtgatca atcaaaaagg tcaagatttg
    20701 ttaaacaatg ctaaagtgga atacaaataa tgggcttgtt agacatcgta aaagcagggg
    20761 ttgttagcgg agatgagctt aataaagttt atgaatacgc taaagcacag ggttttgcta
    20821 tccctgccgt taatgtagtg ggaactgatt cgatcaatgc tgttttagaa gctgctaaaa
    20881 aagtaaattc tcctgttatc atccaatttt ctaatggagg agcgaaattt tatgcaggaa
    20941 aaaattgtcc acaaggtgat gtattaggag cgattagcgg ggctaagcat gtgcatttgc
    21001 ttgctaaggc ttatggtatc ccagtgattt tacatacaga tcacgctgct agaaagcttt
    21061 taccttggat agatggactt atagaagcaa atgctgagta caaaaaaact cacggacagg
    21121 ctttatttag ctctcatatg cttgacctta gcgaagagga tttagaagat aatctaagca
    21181 cttgcgaaac atatcttaaa aaacttgatt ctttgggaat ttcactcgaa ctcgaacttg
    21241 gttgcactgg gggagaagaa gatggagtgg ataatacagg tattgataat tctaagcttt
    21301 atacccagcc tgaagatgta gcacttgcat atgaaagact tgggaaaatc agcgataaat
    21361 tttcaatagc agccagcttt ggaaatgtac atggagttta taaaccagga aatgtaagtt
    21421 tacaacctga aattcttaaa aattcacaaa aatttgtaaa agaaaaattt ggcctagaag
    21481 ttgataagcc gatcaatttt gttttccatg gtggaagtgg aagcgaatta aaagatatca
    21541 aagatgcggt gagttatggt gtagtaaaaa tgaatatcga tacagatact caatgggcat
    21601 tttgggacgg agttcgcgaa tatgaagcaa aaaaccgtga atatttgcaa ggccaaattg
    21661 gcaatccaga aggtgaagat aagcctaata aaaaatacta cgatccgcgt gtttggctaa
    21721 gaagcggtga ggaaagtatg ataaagcgtt tagaacttgc ttttgaagat ttaaattgta
    21781 taggaagaaa ttaagccttt ggcttaaatc ttccaaattt tattttaaag attttttaaa
    21841 ttgcttgata acaatcttta aaatagaatt tagctaatgg ggtattagtg ttatggatat
    21901 aagatcggat gaaatttcag aactcattct gccagaaagt aaagagaaaa aaggatattt
    21961 ggtttattta aaaattattt ttatacccgc tttactttat gtttttattt tattgggtta
    22021 ttatgatatt ataaatttta aagtcgaatt gcacactgtt gttatgatag gctttatttt
    22081 tttcacagcc cttgtgtttg caaggcatag ttctgaatac gcatacagca tttttgaaca
    22141 acaaaaagat gaatttaaac aagccttaaa aagacatatt atgaagcatt ttcttactat
    22201 aggtaaggat acaaaatcta atgcaaattt tgatgatttt gcttatgctt atgttagggg
    22261 tgcaaggaat gaaaactttg ctagtattgg tgcagctatt tttcctatga tgggaatttt
    22321 aggaactttt atcagtatag ccttgtctat gcctaatttt agctctagcg atacagcagc
    22381 cttagagcaa gagatcgctc ttttgctaag tggtgtagga actgcttttt atgtttcaat
    22441 ttatggtatt tttctagctc tttggtggat gttttttgaa aaatttggaa agagtaagat
    22501 cgagcgtttg ttaaatcgtc aaaaaaattc tacaagtgga tttttttgga caaaagaaga
    22561 gcttgatcaa agatatttga gtgaaagctt gcaacatttt gaaaaaatca gtgccatttt
    22621 taaacaagta agcaatcaag atttttttgc agagcttgat catactatag atagaaaatt
    22681 tggaattttt caagatatgc tcaatgtaga agaaaaagct ataagattga gtggggagca
    22741 tattaagcaa actatgggtg agttaagtag agcacaaaga gatcaaagag atcttggaaa
    22801 aatgtatggc gaaatgctaa atggtatagg aatgcttaat caaaatttaa aagaaatcaa
    22861 tatgcgaatg tctgaacaat ataaccgcct tcttgatatc agtagtgaaa aaattcagca
    22921 ttttgataaa accttgcttg cttttgatga aaaagtagat cgttttggta aaaattttga
    22981 attatatgaa aaagccattt tagaaagtca agaaaaagtt tttgaaggtt ttaaagcaag
    23041 tctttttgag ggtatgcata aatttaaaga agtttatgaa gaagaaaaaa gtatcgatgc
    23101 gaaaatcaaa atgatggata aattaaagca agaaattaag aatttaaatg aagaaacaaa
    23161 tgaagtgatg gctaaaatag gtaaaattcc taatcctgct caagaagagc aagataatat
    23221 agaaaatgaa attctttcaa gcgaaaagat aactgaaaat acagagcaaa ccaaagaaaa
    23281 tcaaaatgat agcgacactt tagattctaa taaaaatttt aataaagaag aaaaagaaga
    23341 taaatgaaaa atgagcaaga agaaggtaat ttttggatag cctatgctga cttgatggca
    23401 gggctacttt ttgtttttat cctgttaata ggtgctattg tagttaaata cgttttaact
    23461 caaagcgatc taagagaaat taaagataat cttaacaaac aagaagcacg cttagaagaa
    23521 agcaaggaag agcttagaaa taaagaagct attgttttta aattaagctc tgatttaaac
    23581 aatgcttcaa gtgctttaaa tcttataaat tctcaaaaag cagaacttga agcaaatatc
    23641 actaattatg agcaattaag caaagagctt aattcatcta tagataataa agataagcaa
    23701 attttgattt tgctaggtca gctagaaaag aaagatgaag aaattagaaa tttgcaagaa
    23761 agctttgata aagcaaaaga aaaggttcaa aatttaagtt tgattcgcga gaatctaagt
    23821 aaagagctac aagctaaact cgatagcaat atcaccatag atcaaaaaac aggttctatt
    23881 tctttacctt ctgaggtatt gtttgataag gattcttata cgcttaaaaa tgaagctaag
    23941 gcgagtttga gaaaaatttt aagtgagtat tttaatgcta ttatcaatga tccaaagatt
    24001 ttgtctaata ttgaaaatat tatcattgaa gggcatacgg atagcgatgg atcttatatt
    24061 tataatcttg atttatccca aaagcgtgct tatgaagtga tgaattttat ctatactttt
    24121 tataaggata taagattgca aaaacttttg atggcaagtg gcagatcgtt ttctgatcct
    24181 gttcttgtaa atggagtaga ggataaagat aaaagccgcc gcatagagat taaattcagt
    24241 attaaaaatg ataatgcttt aaaagatgtt gaaaagtttt ttgagtttca ctaagaattt
    24301 taaatgctaa tttctcctat agaaaaaatt caatttcaag gatttgaatt ttatatcaag
    24361 cgtgatgatt tgctaggaga gatcaatgga aataaagcta gaaaacttgc tttttacctt
    24421 tctcaaaatt ataatcagag ccaacgcttt ataagttatg gtggcattca aagtaatgct
    24481 ttagtagcac ttagcatatt tgcaagtaaa agaaatttaa ctcttattta tgcttgcgaa
    24541 aagattccta cttatctaag aaataatcct tgcggtaatt ataaattagc cttggaaaat
    24601 aatgtttatt ttattgaaaa tcatagcgat aaagacttaa aaacatttgc actttctttg
    24661 tgtgaaaaag atgatgtttt tatagagcaa ggagttgcta atttaaatgc cgaatcaggt
    24721 tatattcaac tagccaagga aatagaaagt caaagtaaaa atttaggttt agattttgat
    24781 atttttctac cctctggcac aggaacttcg gctgcatttt tagctaaaaa ttccaaattt
    24841 aaagttttta cttgtgcttg tgttggagat gagtgctacc ttaaaactca aattttaaat
    24901 cttattaaaa attatgattt ttcgaattta gaaattctaa aaagtgataa aaaatatcat
    24961 ttttctaaac tttatctaga attttatcag ctttataaag atttaaaaca agaatgtcaa
    25021 atagaatttg acttgcttta tgacatgcta ggattgagca tagccttaaa aagagaatgg
    25081 aaaaatccct tgctttatat ccaccaagga ggaatttctg gaaattcctc tatgttagaa
    25141 agatatatat ttaaatattg taaagataaa tgatttattt ttgtagatgg cttaaaagat
    25201 ttttacacgc taaagaaatg atttgatagg tttcatcaaa attcccacta taccatggat
    25261 cagggacttc atcatatcct aaatgagaag caaaatcagt gatttttaaa agtttatttt
    25321 gagtattttt ataatttttt tgaacattct taaaattaga attatccatg gtgattaaaa
    25381 aatcactttc atcacaaagt gcttgagtga gttttttgct tgtaaaattt tgatatttta
    25441 tatttaagct tttaagttta ttttgagtgc catagtgcat attttctcca tcgtgttctc
    25501 ctgaggttcc agcactggtt ataaaaaatt ctttttctaa atttgctttt ttaacaagat
    25561 ctttcataac aaattcagcc atgggggaac gacaaatatt tccaagacat acaaaaacta
    25621 tctttttcat tttcatcctt gaaatttaat tgaaaattat aaaaaatatc atacaataat
    25681 tttatggaaa atttcaatag gactttatgg gtatgttggt ttggcgtctt tactacaagt
    25741 atgggactta gtcaaattgc tccaatcttg cctttatata tcaaagaatt aggacataca
    25801 gatactagcg aaatcgcatt ttactcagga ttagcttttg gaatcacacc acttggaatg
    25861 gctatttttt cacctttgtg ggcatatttg ggtgcaaaat acggctataa aaatatgcta
    25921 cttcgagcaa gtttaggaat gtcagcttta acgctgtggc ttagttttgc tcatgatgct
    25981 atggaagtgg ttttgatacg aggtttaacg ggtattgtat caggatttac cgcagcagct
    26041 gttgttttta tcgctgtaat agcacccaaa gaaaaagtag cttatgcttt ggggacactt
    26101 tctactgcat ctatcagtgg gagtttgtta ggtcctttat ttggtggagt tgcggcagga
    26161 atttttagca ttagtgtagt ttttgatttg gtagcctttt tgcttgcttg ttcttttgtg
    26221 acaatttttc tttttattca tgagagaaaa attcaaaaag aagcaaaaaa aaatactcaa
    26281 gaatttaaag aaaataaaaa acttattgtt attattttta tcacaacttt tatcattcag
    26341 tttggaactt ttggggttat gcctatttta agtctttatg tagaacaaat ttatcaaggt
    26401 gaaaatttgg ctctttgggc aggtatagtt gtagctgcaa gtgggattag caaccttttc
    26461 tttgcgccaa aacttggaaa aatagcagat aaaatcggcc ctagcaaggt tatttttagc
    26521 gctttgatat tttgtggaat ttgtttttat ttacaatcct tggctaccaa tgtttatgca
    26581 cttattttcg taagattgct tataggaata ggtcttggag gacttttgcc ttgcgtgaat
    26641 gctttgctta aaaaaggtgt tagtgctaaa aatttaagcc ttgtatttgg ctttaatcaa
    26701 acttgtcagt ttttaggaaa tttttgcggt gcttttggag gaggattgat aacagcgcat
    26761 tttagtgtag aacttgtttt tgcttttatt tgctgtattt ttattttaaa tgctataatt
    26821 tttttgatat ttgaaagaaa ttatattttt tctaatcaag gtttataatt ctttagaaag
    26881 gtgattttat ggaactcatt ttacttagtt tgattgttat tttgcttgta tttgtcatta
    26941 taaagcagtt taaaaatagc tctaaaatag aagagaagga cattcatatt agcaatgata
    27001 ttacccaact taaatccata ggagagctta gtgtttttca agtctttagt aaagaaattg
    27061 ttactaaaaa agatagtgct tttaacggaa tttggaaaag tattttgggt tggtctttaa
    27121 gcgaaagaca gattgctttg atttttgaat ttgagatcac atttttatat gatttaagag
    27181 ataaaaattt tgaaatcata gttttagata atgatcatta taagattatt atgcctgaat
    27241 gcaaatacaa gcacagcatt atagatatga aattttatga tgaaaaaaat gctaaatttt
    27301 tgcctttttt actgcctgat tctattaata gcacaggact tagctttagt gaaaatgaca
    27361 aaaataaact tataagagaa gccaaagaag aggttaaaga attgtcatta aatcttatta
    27421 gaaatttaga aagtaaaatt cacaaaagtg ctagagatac tttagaagct atagccaaag
    27481 gttttggagc aaaaaaggta gagtttgaat ttaaggacaa tactcaaaag ctagatataa
    27541 actagctttt ttcttttctt acttgagtga tactttttcc acctaagccg taattgtctg
    27601 tatcgatttc atcaatgatt actacggttg aggctttgtt tttgtttaaa actttagcga
    27661 gtaaatctgt aactcctgcg ataagctctt gtttttgttc gcttgtaggt tcaccgtttt
    27721 ctttggtaat gcgtatattt acaaaaggca tttaaaactc ctttatatat tt
//
LOCUS       DBBXOW010000014        27469 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.014, whole genome shotgun sequence.
ACCESSION   DBBXOW010000014 DBBXOW010000000
VERSION     DBBXOW010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27469
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.014"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            40..2244
                     /locus_tag="ACJE1S_000615"
     CDS             40..2244
                     /locus_tag="ACJE1S_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806182.1"
                     /translation="MIWKKEDLIDILKSDGSVYKNYENNSYFFDLQKEIKLECIVLKL
                     NNKTNIVNIEYSKDNLIFYSFDSELCEIKDNAMIFILSEKISVRYLRICIKRDNLKQI
                     NFYIRKFPLLFVAARGDAFGSRIMALLNAIWLSKKFRCKFGFVWNALFHIKQDDNVQH
                     KTVMPSLPLEEEVFESIFIKKYSYTKLLKSYPGSIFQYKAANKMSIDRLLEKPYSHDF
                     GWYVAGGFIDIYLDGLQDGEYLTGLRNAWREIQFLPDFNDSIQKGIDEAGKLGEFVSI
                     HIRCADMCYSDFRFIMLRNYKYRHIVTVEMALAIIDYELNRQNVLICGDDLALLDSLK
                     KHYSNQPRKFKLYSMNDFVNKYTFKTNIEQILFELYFRSKSSLIYSTKSTFGILPYLV
                     SESSRLNHIYDFCSKNDYYKYIKSNIGKIVVHDYQLAASYFVLFIMGIEIEVDINELY
                     IYIRKSLSHDKLNITYQLFLFFTLLRKGKNYQAEKYICFLFKKYPKSIFSFIQKEPLN
                     IYKNIITEIMSLQEKKYNFSFLFASAVYSHHKDYENSLLCYNKIIGNIELETFSYLVA
                     NLLENLHVIRNEDEKCKFLDRIYNSLSKANCATQFNQPQSKLSFQAHHGTAKSRIQNQ
                     LSYKLGQAMIVNSKSLLGYIRMPFVLSYIKDKHKQEQKIYQEKIKKDPSLKLPPLESY
                     PDYKEALKEKECLTYKLGEALIKANKTWYKGGYVKLLFKIRKLKIKKRKLNE"
     gene            2237..3493
                     /locus_tag="ACJE1S_000616"
     CDS             2237..3493
                     /locus_tag="ACJE1S_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HGG0806183.1"
                     /translation="MSNRKIGIIGAGISGMSIARLLKDDFEVEVLEKFNNVGGIARTK
                     DVGGKPYHINGGHCFNSKFDDVLDFVFNTVLDKDKWNYLPRKAEILFKNNWVTYPIEF
                     SIKEIDSFDTSLAFQITKEMFNASYEKGKNLEEWFINHFGLTLAKEYFIPYNTKIWGI
                     APKNMDNVWIEDEKQMKLPVPTKESFYKSLVGKITDKMSHAAFYYPKTNNQNTFIEAI
                     GEGVDILTNYDVKDITKENNQWIVNGEKKYDILINTSPLDLIPQILKNIPIKALSCFN
                     KLKYNKVTNIFWETDGSLDITWGYIPDPSIGFHRISNTGSIVQPKGNFCTTEAIGEIP
                     YDRLVEEGQKIPFLKKPLDYNVTEHAYVFFDLNYTKAKTGAISYLDSLGIYSHGRFGE
                     WEYYNMDVCIKRSIDLAKNIKEKYKG"
     gene            3496..4038
                     /locus_tag="ACJE1S_000617"
     CDS             3496..4038
                     /locus_tag="ACJE1S_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HGG0806184.1"
                     /translation="MAIEFDIQESKILKGVYIVTPNKFRDLRGEIWTAFTSGTIDKLL
                     PNGLKFIHDKFIHSKHNVIRGIHGDIKTYKLATCVYGEVHQVVVDCRKDSPTYLKYEK
                     FIINQDNQQIILVPAGFGNAHYVSSESAVYYYKCAYLGEYVDADDQFTYAWNDERIGI
                     NWPTNSPILSDRDVLAVNKG"
     gene            4042..5094
                     /locus_tag="ACJE1S_000618"
     CDS             4042..5094
                     /locus_tag="ACJE1S_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase family protein"
                     /protein_id="HGG0806185.1"
                     /translation="MEKNSRIYIAGHRGSAGSAIMEKLQNLGFDNLIYATREELDLLD
                     FDAVKNFFDDNQPEYVFFAAAKMSALGVRAPADILYENLAIQNNIFHNSYLSNVKKLI
                     FFGSSWMYPQYTQNPIKEDSLLTGELEYNAEPYALAKIAGVRMCEFYNLQYNTNFISV
                     ALTNLYGKTADFNLKTARVLPVMLRKFHLAKLLNEKKYGDILLDLNLQDENEAISYLK
                     TNGIYEEYIELWGTGKTRREFIHSDDLVDACMYIMKHVNFSDLSKNNIKNTHINIGTG
                     SDLSIAELALLIKKITQYKGEIKFDISKPDSPMNRLLDCSKIHSLGWKHKIELEEGVK
                     IMYEDYLQNSKRVLRG"
     gene            5096..6127
                     /locus_tag="ACJE1S_000619"
     CDS             5096..6127
                     /locus_tag="ACJE1S_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HGG0806186.1"
                     /translation="MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQESMDNIY
                     HLSDRINKKDRISIFYADLNDYSSIQKLFESKRPDVIFHLAAQSYPKTSFDIPIETLQ
                     TNIIGTANILENIRLLKAKDGYDPVVHVCSSSEVYGRAKVGVKLNEDTTFHGASPYSI
                     SKIGTDYLGRFYGEAYGIKTYVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVV
                     KVGNLSSVRTFQDCRDAIRAYYLLSLESEKGKVPCGEAFNIAGEEAFKLPEVIDILLG
                     FSTRKDIKVEEDEERLRPIDADYQMFDNTKIKSYINWKPEIPARKMFEDLLNHWRKEI
                     SMDRIPLNR"
     gene            6131..7150
                     /locus_tag="ACJE1S_000620"
     CDS             6131..7150
                     /locus_tag="ACJE1S_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HGG0806187.1"
                     /translation="MMIIRSQTPLRLGLAGGGTDINLYCDQYTGYVLNATVSLYVHCT
                     LTERNDQKIIFDSSDTGIKVEYQSKEFLENDGKLDLYKAIYNRLIKDYIKRPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGIIKAFAEWLNLPLGEYEIARLAYEIEREDMAIVGGAQD
                     QYAATFGGFNFMEFYNQKRVIVNPLRIKNWIASELEARVLLYFTNITREAKDIEEHKK
                     GKLGDENSLNAMHAIKQDALDMKEALFRADFEKIAQILGKSWQSKKIISEIVSNDELE
                     RIYHLAMENGAYSGKTSGAGAGGFMFFMVDPVKKYKLKKILNEQQGYVQEFYFTKEGA
                     KSWKI"
     gene            7138..7743
                     /locus_tag="ACJE1S_000621"
     CDS             7138..7743
                     /locus_tag="ACJE1S_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HGG0806188.1"
                     /translation="MENLNLYIKSHFSDSIDVKDKILNDDNIINLIKEVSLKVISAYK
                     NGHKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVSGDVFIGISTSGNSKNILKALDVCKEKGILSIGLTGASGGAMNELCD
                     YCIKVPSSCTPRIQEAHILIGHIICAIVEEELFGKGFDCKL"
     gene            7731..8399
                     /locus_tag="ACJE1S_000622"
     CDS             7731..8399
                     /locus_tag="ACJE1S_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HGG0806189.1"
                     /translation="MQAIVLAGGLGTRLRSVVQDLPKPMAPINGKPFLAFVLEYLKKQ
                     GITEIILSVSYKYELIQEYFKDEFHGMKIHYNIEKELLGTGGAIKDALKLVKNEAYVV
                     NGDTFFDIDLKKLVLNSSKICIALKQMQNFDRYGTVNVDEQGIVTSFEEKVFKKQGLI
                     NGGIYLLKKDIFDEFSLEKKFSFEEFLQENYKLLKIQTQIFDDYFIDIGIPEDYIKFI
                     KLRK"
     gene            8411..10027
                     /locus_tag="ACJE1S_000623"
     CDS             8411..10027
                     /locus_tag="ACJE1S_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806190.1"
                     /translation="MTAYIHIGTPKTGTTSIQKFITLNLDLFLQQGMVYPKTFCVNNQ
                     HAKIAYIIKNMKSDFNFWLNQEVVFLRNEISENKKYTFLFSSEMISLYINESYTLIRL
                     KELFNWLGFKNIKCILYLRSNDEYMISHSSQNIKCGLGVYYKRKAEFCTSMGMHMYKT
                     ICKNYINVFGKENIIVRLFDKNEFYQGDLLKDFIHSIGLEWDNKFRIPERENETLDLI
                     GFELQGRLNKLGCGWNNKINSTMEFSEKYFTSKDPHLKFQPAKEVTQSYMDYFEESNE
                     WVRQEFFPHKERLFPKKDLSNYKENYELKEMKPEYWDKIAEFIADIVKTKNQNIADKA
                     NIIQNKDKIITDQTTQIKSLQVNIKDSEVKLVQIQTSNNTLSNIIKEKDNIINSNINQ
                     INQLQNNIQEKSTQLNQIQSKLSFQTKYGTAKTRIQNQLSYKLGQAMIVNSKSFLGYI
                     RMPFALSYIKDKHKQEQKNYQEKIKKDPSLKLPPLESYPDYQEALKEKECLTYKLGEA
                     LIKASNNWYGGGYIKLLLEIRKLKKEFKKK"
     gene            10063..12090
                     /locus_tag="ACJE1S_000624"
     CDS             10063..12090
                     /locus_tag="ACJE1S_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004289220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HGG0806191.1"
                     /translation="MKFHTTSKKLIKNVKDFYNIVLYKAYKSIGKEDVFVGWGRKNSG
                     LKAVELAKKYNVKFLLLEDGFLRSLNLGVENSPSFSIVKDDIGIYYDATAPSKLENIL
                     NTYEFSSKELAWAKKAIELIKKEKLSKYNNNLCVSKELFSVNEERVLIITQVANDASL
                     KFGLADGFSTQDMINDAIKENLNAKIYIKIHPDVLSGKKQSDFSMQDLPSRCVILKEN
                     YNPIELLSHFKKVYTKTSGMGFEALMLGCKCVCYGMPFYAGWGLTQDKQVCKRRLKKR
                     SLEEVFCAAYILYSEYFNPYLNQKSDIFDTIHTLAKYKKIEQVNSHTLYFLGFTLWKR
                     WFMKPFFKAKNNKIIFLNSLNELYKANLNSEDKIFIWGKKYDKALLAKDFNNEIFLVE
                     DGFLRSVFLGSDLTRPFSLIVDSKGLYVDPNHPSDLEELLQNHEFDDTLRQRAKKLIT
                     TITQNKFSKYNGLKHEKLDFNTNKKIILIPAQVEDDASMILGGADFDTLKLLQSVRKA
                     NENAFIVFKPHPDVLSGNRKGLKDKDIILKYCDEIIENVSIDSAINACDEVHTITSTS
                     GFDALLRGKKVVVYGKPFYAGWGLTQDLHHISRRTRVLSLEELVAGVLILYPRYIHPK
                     SKNLCEVELALDIMLALQKDYFSKRWLKILIDFRILMLRKIRRIGEVFIKR"
     gene            12087..13271
                     /locus_tag="ACJE1S_000625"
     CDS             12087..13271
                     /locus_tag="ACJE1S_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HGG0806192.1"
                     /translation="MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKL
                     NFNGGDFLFYPSGKRCKCDEKDLENFYENFFKEKKIDAIVMYNDCRLIHAKAIKVAKE
                     LGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNISTKESIKEIPGGFKF
                     MAFSAFLYWLFSFLLAPFFNNKLHHRTLFPFEFLFWFRSLYRKYLYKLTEKKLNQKIY
                     SLEKKYFLAILQVYSDTQIKHHYKKSIEEFIEELILSFANHARAKSYLVFKHHPMDRG
                     YRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPNLVLNFKNYLLNTNQFNGNFYKNSFL
                     SR"
     gene            13338..14459
                     /locus_tag="ACJE1S_000626"
     CDS             13338..14459
                     /locus_tag="ACJE1S_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HGG0806193.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHRFDLKADLSGIE
                     KNGNFPFFKINCENTQTRYHFLTWNDIVKKNWSQSYKDALMDCYSFFRIYTITGLFLK
                     FGKESIYQLVTGYYPFFYVIFSLLLSLGLALGSFVFLQNHIPSFLAIVIGIVLGFLLN
                     RFLFKLGRKLAVFWIARICAFCATWKEKRLGAMEQRIKLFADEILKSLKQNENRQDYE
                     LILVAHSVGTIVCIEVLEHILKQNLDKRVLDKLKILTLGECIPLTSYQKNSDDFRKKL
                     EFVSAFDLKWYDYTSIIDGACFPQVDFFRTSGVQANFTPPFLSAKFHTLYEKNEYKKI
                     KRDKNKAHFLYLYSPHIKGSYDFFAFVVAPKFLEEKVKI"
     gene            14456..15826
                     /locus_tag="ACJE1S_000627"
     CDS             14456..15826
                     /locus_tag="ACJE1S_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HGG0806194.1"
                     /translation="MSQCPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVKEFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRISKVFNLMSEAVSDMMKRFEKYPNASIIEVDETMTFITADVIFRTIMS
                     SKLDEEQGKKILDAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQALS
                     DIIKPRYDAVSSGKAENFEDILGSLLLVVDAQTNQRFSFEEILDQVAMLFLAGHETTA
                     SSLTWTLYLLSLYPDEQEKAYKEIIQVLQGENIQISHLKQFRYLTHIFKESLRLYPPV
                     GFFAREAKKDTKVRDKMIKKGSGVVIAPWLIHRHEGFWANPHEFKPSRFEGEYKKDAY
                     LPFGVGERICIGQGFAMQEAILILANILKKYKLELEEGFVPDVVGRLTIRSANGMRIK
                     FSKREP"
     gene            15823..16245
                     /locus_tag="ACJE1S_000628"
     CDS             15823..16245
                     /locus_tag="ACJE1S_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806195.1"
                     /translation="MKRVKARIRANFRNRIKRNLKGSLKEKLAGTILLCAIVPLAICG
                     YLLIVIVGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARVVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGKR"
     gene            complement(16248..16595)
                     /gene="acpS"
                     /locus_tag="ACJE1S_000629"
     CDS             complement(16248..16595)
                     /gene="acpS"
                     /locus_tag="ACJE1S_000629"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HGG0806196.1"
                     /translation="MRIGCDIVAISRIDTIYQKHGNAFLDKFLNQNEQKLIKSSSTLA
                     GFWAAKEAASKALGVGISKECGFLDIEISKDSKNAPHLKLASHVLEKFKINSTSLSIS
                     HDNGFAIAVVALD"
     gene            complement(16595..17131)
                     /gene="fliL"
                     /locus_tag="ACJE1S_000630"
     CDS             complement(16595..17131)
                     /gene="fliL"
                     /locus_tag="ACJE1S_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HGG0806197.1"
                     /translation="MDEELENNEEKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKAAPKEEAKTDKAKVTAPAQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNTELLKPELDKKVAVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            17243..18607
                     /locus_tag="ACJE1S_000631"
     CDS             17243..18607
                     /locus_tag="ACJE1S_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HGG0806198.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLAKGCKNVS
                     VGYDARYSADELYRYLVSGLNKAGMQVYNIGLVPTPLGYFSLYEGMKFDANIMITGSH
                     NPKDYNGFKITIGKESFFGAELKEFSKEVYKHLEDEIEENLEAQKYDILSLYVNFMCE
                     QFNFLKDFNYKFAIDCSNGAAGVVIEPLVKALNLKAHVMFSNPDGQFPNHEPDPTEEK
                     NLHAIKNFLNENQEYPLAFAFDGDADRMVALSKTHIFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGYDLESMISALPKLYTTPEIKIPVSEEEKFKLVDEFKKAIEKGAL
                     EGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEASSLEQAKELEAKVFKLFNDI
                     KESV"
     gene            complement(18829..19104)
                     /locus_tag="ACJE1S_000632"
     CDS             complement(18829..19104)
                     /locus_tag="ACJE1S_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806199.1"
                     /translation="MGGYLFFFGLIILFGLFDSDFWEFFKFFLQIRMILIPLRVVFII
                     LVPFHLENSFLGKTFYFLENLFCLVFAILLIVAIIMPFLERISKIFF"
     gene            complement(19238..19564)
                     /gene="rsfS"
                     /locus_tag="ACJE1S_000633"
     CDS             complement(19238..19564)
                     /gene="rsfS"
                     /locus_tag="ACJE1S_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HGG0806200.1"
                     /translation="MQERVDLIVKILDEKKAEDIKTFDMSEQDYFVKYVIIAATLGEK
                     HALSLIDELKTKLKAKGEEFLNIESSEEWSVIDLGDILIHLLTPEHRGIYNIEELLES
                     LKKNKA"
     gene            complement(19593..20138)
                     /gene="nadD"
                     /locus_tag="ACJE1S_000634"
     CDS             complement(19593..20138)
                     /gene="nadD"
                     /locus_tag="ACJE1S_000634"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HGG0806201.1"
                     /translation="MKIALFGGSFDPPHKGHDAIIKEALAKLDIDKLIIVPTFINPFK
                     KGFFADEKQRFAWVNKLWGNLEKVEICDFEIKQKRPVPSIESVEYLYKIYHPSKFYLL
                     IGADHLEKLHLWHDFERLNSLVEFIIANRNDIEIPKNFKDLKTNIKIASSFIRSTLDT
                     HEVCDEIKNEVKNYYEKLQKN"
     gene            20200..21198
                     /gene="gap"
                     /locus_tag="ACJE1S_000635"
     CDS             20200..21198
                     /gene="gap"
                     /locus_tag="ACJE1S_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG0806202.1"
                     /translation="MAVKVAINGFGRIGRCVARIISKRDDIELVAINDTTDIELTKYL
                     FKYDTVHGEFEGSVENEGDDLIINGKKIKVFKSRDIKELDFAKYGAQIVLECTGAHLT
                     IEKCQGFLDMGVQKVIMSAPAKDDTPTYVLGVNSQNYKGENIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKTKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSKKVSKEELNEAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAVVVSDLTQVIADDFVKVVAWYDNEWGYSSRLVDMAVYIANKA"
     gene            21201..22403
                     /gene="pgk"
                     /locus_tag="ACJE1S_000636"
     CDS             21201..22403
                     /gene="pgk"
                     /locus_tag="ACJE1S_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HGG0806203.1"
                     /translation="MSDIISIKDIDLSKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKS
                     KAANLKASEILMLENLRFEKGETKNDENLAKELASMAEVYINDAFGVCHRAHASVEAI
                     TKFFDENHKGAGFLLQKEIEFAENLIKRPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKAQGFDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQESPMKFVPSQEIPSGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHAISDGHATTVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     VLRSGGVQ"
     gene            22400..23071
                     /locus_tag="ACJE1S_000637"
     CDS             22400..23071
                     /locus_tag="ACJE1S_000637"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HGG0806204.1"
                     /translation="MIFAANLKCNHTRSSFKIYANILNQYLEAKNDDIIVFPPSIAFL
                     ENELNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDENLIKAKF
                     DFAKEHAYKIVFCIGEDLKLKNSNQTLDFLKKQLEVIDLDYKNLIIAYEPIYSIGSGV
                     SAKKEDIAKVLEFLSSLTQAPLLYGGSVNEDNIKDILNIKHCSGVLIGSAALKAENFI
                     KLIKG"
     gene            23075..23902
                     /gene="fabI"
                     /locus_tag="ACJE1S_000638"
     CDS             23075..23902
                     /gene="fabI"
                     /locus_tag="ACJE1S_000638"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HGG0806205.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACYEQGASLAFTFLNDALK
                     KRVEPIAEEFGSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFIVHAVAYAPKEALENS
                     FLETSKEAFDIAMGTSVYSLLSLTRAVLPVLKEKGAILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGIKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINAPLKRNV
                     SIEDVGNSAMYLLSDLARGVTGEVHYVDAGYNIMGMGDVTKDENGNTVLCWDNQKGQ"
     gene            23902..25401
                     /locus_tag="ACJE1S_000639"
     CDS             23902..25401
                     /locus_tag="ACJE1S_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HGG0806206.1"
                     /translation="MAKLSNEELKDILIKRIEKIENSDLVDKKTINEESVKALAKHLS
                     LGNEIPALAQKFFELAPKTKVVWLHLCECTGCSESLLRADLPSFDELVFDFFSLEYHE
                     TLMAANGTKAEELLEHVLKEDFVLAVEGGVAAIDTFFLTIGAEGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLTQKVVNIPGCPPSDVNIIATLTYFAL
                     FGILPELDEQNRPVWAYGKCLHDLCERKAKFESGIFAEHFDDEKAKSGACLFKIGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANPFSYAKLVNQE
                     FSTEFALEEQIQILSSMDFEFESNLKLILQNIAKNKLGALLVENYKTSFEKNFIFIEQ
                     NFDENPMPSSDIWKYFEINFILAKGEFLQDKNDFLKAAQNYSFKHASPYDFKLTLNEK
                     SKLDVSKSFRMPLIYLCGGLDFEALAYSVLKAFEKNIKSVIDFNKQKAG"
     gene            complement(25398..27239)
                     /gene="feoB"
                     /locus_tag="ACJE1S_000640"
     CDS             complement(25398..27239)
                     /gene="feoB"
                     /locus_tag="ACJE1S_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HGG0806207.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSVLSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEEAGNYLFGI
                     YLLGAILGLIAAKFLRSTAFRGIDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKNEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKL
                     SVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPLPSAVAYILFVMIY
                     NPCFAATIVFSKESGKIKYTFFLFLFTCISAYIVAFIGLNITKFVIN"
     gene            complement(27236..27460)
                     /locus_tag="ACJE1S_000641"
     CDS             complement(27236..27460)
                     /locus_tag="ACJE1S_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HGG0806208.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
BASE COUNT         9788 a         3641 c         4971 g         9069 t
ORIGIN      
        1 agttatattt gagattagga agctgaagaa ggttaaaata tgatatggaa aaaagaagat
       61 ttaattgata ttttaaaaag cgatggttct gtatataaaa actatgaaaa taattcatat
      121 ttttttgatt tacaaaaaga aataaagtta gagtgtatag ttttaaaact aaataataaa
      181 actaatatag ttaatatcga atattccaaa gataatttaa ttttttattc ttttgatagt
      241 gaattatgtg aaataaaaga taatgctatg atttttatac tatcagaaaa aatatctgtt
      301 agatatttaa gaatttgcat taaaagagac aatttaaaac aaataaattt ttatatacga
      361 aaatttccat tattatttgt agcagctaga ggggatgcct ttggatcaag gataatggct
      421 ttattaaatg caatatggtt atctaaaaaa tttcgatgta aatttggttt tgtatggaat
      481 gctttgtttc acataaaaca agatgataat gtacaacata agaccgtgat gccgtcttta
      541 ccattggaag aagaagtttt tgaaagcatt tttatcaaaa aatattcata tacgaaactg
      601 ttaaaatctt accctggaag tatttttcaa tataaagccg caaataaaat gtctatagat
      661 agattgctag aaaaacctta ttcacacgat tttggttggt atgttgcagg tggttttatt
      721 gatatatatt tagatggttt gcaagatgga gaatatttaa cagggcttag aaatgcttgg
      781 agggaaattc aattcttgcc ggattttaat gatagcattc aaaaaggcat agatgaggca
      841 gggaaattag gagaatttgt atccatccat ataagatgtg ctgatatgtg ctatagtgat
      901 tttagattta taatgttgag aaattataaa tatcgacata tagttacggt agaaatggca
      961 ttggcaatta tagactatga attgaatcgt cagaatgttt tgatctgtgg agatgattta
     1021 gctctattgg attctcttaa aaaacattat agcaatcaac caagaaaatt taaattatat
     1081 tctatgaacg attttgtaaa taagtatact tttaaaacta atattgagca aatacttttt
     1141 gagctttatt ttcgttcaaa atcaagctta atttatagta caaaatccac ttttggtata
     1201 ttaccttatt tggtttcaga aagtagccgt ctaaaccata tatatgattt ttgcagtaaa
     1261 aatgactatt ataagtatat aaaaagtaat ataggtaaga ttgtagttca tgattaccag
     1321 ttggcagcat cttattttgt tttgtttata atgggaatag agattgaagt tgacataaat
     1381 gaattatata tttacataag aaagtcatta agccatgata aattaaatat tacttaccag
     1441 ctttttttat tttttacttt attaagaaaa ggaaaaaatt atcaagctga aaaatatata
     1501 tgttttttat ttaaaaaata tccaaaaagt atttttagtt ttattcagaa agagccattg
     1561 aatatttata aaaatattat taccgaaata atgtctttgc aagaaaaaaa gtacaatttt
     1621 tcatttttgt ttgcaagtgc agtttattcc caccataagg attatgaaaa ttctttatta
     1681 tgctataata aaataattgg taatatagaa ttagaaacat tttcctattt ggttgcaaat
     1741 ttattggaaa atcttcatgt gattagaaat gaagatgaaa aatgtaaatt tttagaccgt
     1801 atttataata gtttatcaaa agctaattgt gctacccaat tcaatcagcc tcaatccaaa
     1861 ctatctttcc aagcccacca cggtacagcc aaatctcgca ttcaaaacca actctcttat
     1921 aaactaggac aagctatgat agttaattct aaatctttac taggttatat aagaatgcct
     1981 tttgtattat cttatataaa agataaacac aaacaagaac aaaaaattta tcaagaaaaa
     2041 ataaaaaaag atccttcttt aaaactacct cctttagaat cttaccctga ttataaagaa
     2101 gctttaaaag aaaaagagtg tttaacctat aagctaggag aggctttaat aaaagctaat
     2161 aaaacttggt ataagggagg atatgttaaa cttctattta agattaggaa gctgaagatc
     2221 aaaaaaagga agttaaatga gtaatagaaa aataggtatt attggagctg gcatatcagg
     2281 catgtctatt gcgagacttt taaaagatga ttttgaagtg gaggttttgg aaaagtttaa
     2341 taatgttggt ggtatcgcaa ggacaaagga tgttggtggt aagccatatc atattaatgg
     2401 cggacattgt tttaattcta aatttgacga tgttttagat tttgtcttta atactgtatt
     2461 agataaagat aaatggaact atttacctcg aaaagctgaa attttattta aaaataattg
     2521 ggttacatat cctatagaat tttcaattaa agaaatagat agttttgata ccagtttggc
     2581 ttttcaaata actaaagaaa tgtttaatgc ctcgtatgaa aaaggaaaaa atcttgaaga
     2641 atggtttata aatcattttg gtttaacatt ggcaaaagag tatttcatac cttataatac
     2701 taaaatttgg ggcatagcac caaaaaatat ggataatgta tggatagaag atgaaaaaca
     2761 aatgaagctt cctgtgccaa caaaagaaag tttttataaa tcattagtcg gcaaaataac
     2821 agataaaatg tctcatgctg ctttttatta cccaaaaaca aataatcaaa acacttttat
     2881 agaagctata ggagaaggtg ttgatatcct tacaaattat gatgtaaaag atattacaaa
     2941 agaaaataat cagtggattg tcaatggcga gaaaaaatat gatattttga taaatacaag
     3001 cccattagac ttaattcctc aaatcttaaa aaatattcct attaaagctt taagttgctt
     3061 taacaaatta aaatacaata aagttacaaa tattttttgg gaaacagatg gaagtttgga
     3121 tattacttgg ggttatattc cagatccaag cataggtttt catagaattt ccaataccgg
     3181 ttctatagtg caaccaaagg gaaatttctg tactacagag gctataggtg aaattcctta
     3241 tgatagattg gtagaagaag gacaaaaaat accatttttg aaaaaaccac ttgattataa
     3301 tgttacagaa catgcttatg tattttttga tttaaactat actaaagcaa aaacaggtgc
     3361 aatttcatat ttagattcgc ttggaattta ttctcatggt agatttggtg aatgggagta
     3421 ctataatatg gatgtatgta tcaaaagatc tattgatttg gctaaaaata taaaagaaaa
     3481 atataaagga tgaaaatggc tatagaattt gatatacaag aatcaaaaat tttaaaagga
     3541 gtgtatatcg taactccaaa taaatttaga gatttaagag gtgagatttg gacggctttt
     3601 acaagtggga ctatagataa gcttttacca aatggattaa aatttataca tgataaattt
     3661 atacactcta aacacaatgt tattcgtggt attcatggtg atataaaaac ttacaaattg
     3721 gctacttgtg tttatggaga agtgcatcag gtggttgttg attgtaggaa agattctcct
     3781 acttatttaa aatatgaaaa atttattata aatcaagata atcagcaaat tatcctagtg
     3841 ccagcaggtt ttggaaatgc tcattatgta agtagtgaaa gtgctgtata ttattacaaa
     3901 tgtgcttatt taggagagta tgtggatgct gatgatcaat ttacttatgc ttggaatgat
     3961 gagagaattg gtataaattg gccaacaaat tcgcctattc tttcagatcg agatgttttg
     4021 gcggtaaata agggttaaaa tatggaaaaa aattctagaa tttatatagc aggtcatagg
     4081 ggttcggcag gaagtgccat aatggaaaaa ttacaaaatt taggttttga taatttaatt
     4141 tatgcgactc gagaagagtt ggatttactt gattttgatg ctgttaaaaa ttttttcgat
     4201 gataatcagc cagaatatgt tttttttgcg gcagctaaaa tgagtgcttt aggagttagg
     4261 gctccagctg atattttata tgaaaatcta gcaatacaga ataatatttt tcataactca
     4321 tatctttcaa atgttaaaaa attaattttt tttggtagtt cttggatgta tccacaatat
     4381 acccaaaatc ccataaaaga agatagtttg cttactggtg aattagaata taatgctgag
     4441 ccatatgctt tagcaaaaat tgctggagtt agaatgtgtg aattttataa tttgcaatat
     4501 aataccaatt ttatttcggt tgctttaact aatttgtatg gaaaaacagc tgattttaat
     4561 ttaaaaacag ctagagtgct accagtaatg cttagaaaat ttcatttggc aaaactactt
     4621 aatgaaaaga aatatggcga tattttattg gatcttaact tacaagatga aaacgaagca
     4681 ataagctatc ttaagacaaa cggaatttat gaggaatata tagaactttg ggggacgggc
     4741 aaaactagaa gagagtttat acattcagat gatttagtgg atgcttgtat gtatataatg
     4801 aaacatgtta atttcagtga tttgtctaaa aataatataa aaaatacgca tattaatata
     4861 ggtaccggaa gtgatttgtc tattgccgag ctagctcttt tgataaaaaa aattacgcaa
     4921 tataagggcg aaataaaatt tgatataagc aagccagata gtcctatgaa tagattgctt
     4981 gattgctcta aaattcattc tttaggatgg aaacacaaga tagagcttga agagggtgtt
     5041 aaaataatgt atgaagatta tcttcaaaat agtaaaagag ttttaagagg ttaaagtgaa
     5101 aaaaacagca ttaattactg gttttacagg gcaagttggc tcgcaaatgg cagatttttt
     5161 actagaaaat acagactatg atgttatagg catgatgcgt tggcaagaga gcatggataa
     5221 tatctatcat ttaagcgaca ggataaacaa aaaagatagg atcagcattt tttatgctga
     5281 tttaaacgat tactcaagta ttcaaaagct ttttgaaagc aaaagacctg atgtgatctt
     5341 tcatctagcc gcacagtctt acccaaaaac ttcttttgat atacctatag aaactctaca
     5401 gacaaatatc ataggcacag caaatatttt agaaaatatt agattattaa aagctaaaga
     5461 tggttacgat cctgtggtgc atgtttgctc ttctagtgaa gtttatggca gggcaaaagt
     5521 gggtgtcaag ctaaatgaag atacgacttt tcacggtgca agcccttata gtataagtaa
     5581 aattggcacg gattatttag gaagatttta cggtgaggcc tatggtataa aaacatatgt
     5641 taccagaatg ggaactcata gtggtccaag gcgctctgat gtattttttg aaagcactgt
     5701 tgcaaagcag attgccttga tcgaagcagg gtatcaagag cctgttgtaa aagtaggaaa
     5761 cttatctagt gtaagaacct ttcaggattg tcgtgatgct ataagagctt attatctact
     5821 ttcattagaa agtgaaaaag gcaaggttcc ttgtggagaa gcttttaaca tagccggtga
     5881 agaagccttt aaacttcctg aagttattga tatactttta ggtttttcta caagaaaaga
     5941 tatcaaagtg gaagaagatg aagaaagatt acgtcctatt gatgcagact atcaaatgtt
     6001 tgacaatact aaaatcaaaa gttatatcaa ttggaagcca gaaattccag ctagaaaaat
     6061 gtttgaggat ttattaaatc attggagaaa agaaatttcc atggacagaa tcccacttaa
     6121 taggtagcag atcatgataa tccgttctca aacacctttg cgtttaggtt tagcgggggg
     6181 gggtactgat ataaatttat attgtgatca atatacaggt tatgttttaa atgcgacagt
     6241 atctctttat gtgcattgta ctttgacaga aagaaatgat caaaaaatca tttttgactc
     6301 ttctgatact ggcataaaag tagagtatca aagtaaagag tttttagaaa atgatggtaa
     6361 attagatctt tacaaagcga tttataatcg cttgataaaa gactatatta aaagaccttt
     6421 aagtttttct ttgcacactt attcagatgt accaagtggt agtggactag ggggtagttc
     6481 tactttggta gtaggtatca tcaaagcatt tgcagaatgg ctcaatcttc ctttaggtga
     6541 gtatgaaatc gctcgtttgg cttatgagat agaaagggaa gatatggcta tagtaggagg
     6601 cgcacaagat caatacgctg cgacttttgg tggatttaat tttatggaat tttataatca
     6661 aaaaagagtt atagtcaatc ctctacgtat taaaaactgg atagcaagtg agcttgaagc
     6721 tagggttttg ctttatttta caaatatcac tagagaagca aaggacatag aagagcataa
     6781 aaagggaaag ttaggagacg aaaattcgct taatgccatg catgcgataa aacaagatgc
     6841 gttagatatg aaagaggcgt tatttagagc tgattttgaa aaaatagcac aaattttagg
     6901 taaatcttgg caatcaaaaa agattatttc tgaaatcgtt agcaatgatg agcttgaaag
     6961 gatttatcat ttagctatgg aaaatggtgc ttatagtggc aagacaagcg gagcgggtgc
     7021 tggaggattt atgtttttta tggtagatcc agtgaaaaaa tataagctta aaaaaatttt
     7081 aaatgaacag caaggctatg tacaggaatt ttattttaca aaagaggggg caaaatcatg
     7141 gaaaatttaa acctatatat aaaatctcat tttagtgatt cgattgatgt taaagataaa
     7201 atattaaatg atgataatat aatcaatttg atcaaagaag tatctttaaa agttatcagt
     7261 gcttacaaaa atggccataa aaccttacta gcaggcaatg gaggaagcgc agctgatgca
     7321 cagcacatag caggggagtt tgtaagtaga ttttactttg atagaccagg tattgcaagt
     7381 atagctttaa caacggatac tagtatatta acagctattg gcaatgatta tggctatgaa
     7441 aatttatttg ctagacaagt acaagctcaa ggtgtgagtg gggatgtttt tataggaatt
     7501 tctacaagtg gaaatagtaa aaacatctta aaagctttgg atgtttgtaa agaaaaagga
     7561 attttaagca taggtttaac cggagctagt ggcggagcta tgaatgaact ttgtgattat
     7621 tgtatcaaag tgccatcatc ttgtacgcca agaattcaag aagcacatat tttgataggg
     7681 catattatct gtgctatagt agaagaagag ctttttggca aggggtttga ttgcaagcta
     7741 tagttttagc tgggggtctt ggcactaggc ttagaagtgt agtgcaagat cttccaaagc
     7801 ctatggcacc gatcaatgga aaaccctttt tagcttttgt tttagagtat ttgaaaaagc
     7861 aaggaattac tgagattatt ctaagtgttt cgtataaata tgaactgatt caagagtatt
     7921 ttaaagatga atttcatggt atgaaaatac actataacat cgaaaaagag cttttgggta
     7981 caggtggagc tataaaagat gctttaaaat tggtaaaaaa tgaagcctat gttgtaaatg
     8041 gagatacttt ttttgacatt gatttaaaaa agcttgtttt aaacagtagt aaaatttgta
     8101 tagctttaaa acaaatgcaa aattttgata gatatggtac ggtcaatgtt gatgagcaag
     8161 gtattgtgac atcttttgaa gaaaaggtgt ttaaaaagca gggtttaatc aatggtggta
     8221 tatacttact caaaaaagat atttttgatg aatttagttt agagaagaaa ttttcttttg
     8281 aagagttctt gcaagaaaac tataaattat taaaaataca aacccaaatt tttgatgatt
     8341 attttataga tattggcata cctgaagatt atataaaatt tattaagtta agaaagtaac
     8401 aaggaaaaat atgactgctt atatacatat aggaacacca aaaaccggaa ctacaagtat
     8461 tcaaaaattt ataacactga atctcgattt atttttgcaa caaggaatgg tctatccaaa
     8521 aactttttgt gtaaataatc agcatgctaa aattgcatat attattaaaa atatgaaatc
     8581 tgattttaat ttttggttga atcaagaggt ggtattttta agaaatgaaa tatcagagaa
     8641 taagaaatat actttcttat tctctagcga aatgataagt ttatatatta atgaaagtta
     8701 tactttaata cgtttaaaag agctatttaa ttggctaggg tttaaaaata taaaatgtat
     8761 tctgtatcta agaagcaatg atgaatatat gatatctcat tcatctcaaa atattaaatg
     8821 tggtttaggt gtctattata aaagaaaggc agaattttgc acttctatgg gaatgcatat
     8881 gtataaaaca atatgtaaga attatattaa tgtgtttggc aaagaaaata tcattgtcag
     8941 attatttgat aaaaatgaat tttatcaagg agatttatta aaagatttta tacatagtat
     9001 aggtttggaa tgggataata aatttcgaat tccagaaagg gaaaacgaaa ctttagattt
     9061 gattggattt gagcttcaag gaaggttaaa taaattaggt tgtggctgga ataataaaat
     9121 taattctact atggaatttt cagaaaaata ttttacttcc aaagatcctc atcttaaatt
     9181 ccaacctgca aaagaagtaa cacaatccta tatggattat ttcgaagaat caaatgaatg
     9241 ggtaagacaa gagttctttc ctcataaaga aagattgttt cctaagaaag atttaagtaa
     9301 ttataaagaa aattatgaac ttaaagaaat gaaaccagaa tattgggata aaatagctga
     9361 atttatagct gatattgtta aaactaaaaa tcaaaatatc gcagataaag ccaatatcat
     9421 tcagaataaa gataaaatta ttactgatca aactactcaa ataaaatcct tacaagtaaa
     9481 tataaaggac agtgaagtaa aattagtaca aatccaaact tctaataata ctcttagcaa
     9541 tatcataaaa gaaaaagata atattataaa ttctaatata aatcaaatca atcaattaca
     9601 aaataatata caagaaaaat caactcaact taatcaaatc caatctaaat tatctttcca
     9661 aactaaatat ggcacagcta aaacaagaat tcaaaaccaa ctctcctata aactaggtca
     9721 agctatgata gtaaattcta aatctttctt aggttatata agaatgcctt ttgcattatc
     9781 ttatataaaa gataagcaca aacaagaaca aaaaaactac caagaaaaaa taaaaaaaga
     9841 tccttcttta aaattaccac cattagaatc ttatcctgat tatcaagaag ctttaaaaga
     9901 aaaagagtgt ttgacttata aactaggaga ggcccttata aaagcaagta ataattggta
     9961 tggggggggg tatatcaaat tattgcttga gattaggaag ctaaagaagg aatttaaaaa
    10021 gaaataaatg atataatctc tttttaattt aaagagagat ttatgaaatt tcacaccact
    10081 tcaaaaaaac ttataaaaaa tgttaaagat ttttacaata tagtcttata taaggcctat
    10141 aaaagcatag gcaaagaaga tgtttttgta ggctggggca ggaaaaattc aggtttaaaa
    10201 gctgtagaac tagctaaaaa gtacaatgta aaatttttac ttttggaaga tggcttttta
    10261 cgctcattaa atttaggtgt agaaaatagt ccaagttttt ctatcgttaa agatgatata
    10321 ggaatttatt acgatgctac cgcaccatct aaacttgaaa atattttaaa tacctatgag
    10381 tttagttcca aagagttagc ttgggcaaaa aaagctatag agcttataaa aaaagaaaaa
    10441 cttagtaaat acaataacaa tctttgcgtg tcaaaagagc tttttagtgt taacgaagaa
    10501 cgcgtattaa tcatcactca agtagcaaat gatgcttcat taaaatttgg tttagctgat
    10561 ggtttttcaa ctcaagatat gataaatgac gccattaaag aaaacctaaa tgctaaaata
    10621 tatattaaaa ttcatcctga tgtgctaagt ggtaaaaaac aaagtgattt tagcatgcaa
    10681 gatttaccca gtagatgcgt gattttaaaa gaaaattata atcccataga attattaagc
    10741 cattttaaaa aagtctatac taagacttca ggtatgggtt ttgaagcttt gatgctagga
    10801 tgcaaatgcg tatgttatgg catgcctttt tatgcaggtt ggggtttaac tcaagataag
    10861 caagtgtgca aaagaaggct aaaaaaaaga agtttagaag aggttttttg tgctgcttat
    10921 attttatata gtgagtattt taatccttac ttaaatcaaa aaagtgatat ttttgacact
    10981 attcatactt tagcaaagta taaaaagata gagcaagtaa attctcatac tttgtatttt
    11041 ttaggtttta ctttatggaa gcgttggttt atgaagccat tttttaaagc caagaataat
    11101 aaaatcattt ttttaaactc acttaatgaa ctttacaaag cgaatttaaa ttccgaagat
    11161 aaaattttca tttggggtaa aaagtatgat aaagctttgt tggctaaaga ttttaataat
    11221 gaaattttct tagtagaaga tggcttttta cgctctgttt ttttaggttc agatcttaca
    11281 cgcccttttt ctttgatagt agatagtaaa ggtttgtatg tagatcctaa tcaccctagc
    11341 gatttagaag agcttttgca aaatcatgaa tttgatgata ctttaagaca aagagccaaa
    11401 aagctcatca ctaccataac gcaaaataaa ttttcaaagt acaacggcct aaagcatgaa
    11461 aaacttgact ttaatacaaa taaaaaaatc attttaattc ccgctcaagt agaagatgat
    11521 gcttcgatga tcttaggtgg agcagatttt gacaccttaa agcttttgca aagcgtaaga
    11581 aaggccaatg aaaacgcctt tatagttttt aaacctcacc ctgatgtttt aagtggaaat
    11641 cgcaagggtt taaaagataa ggatattatt ttaaaatact gcgatgaaat catagaaaat
    11701 gtcagcatag acagcgccat aaatgcatgt gatgaagtac atactatcac ttctacaagt
    11761 ggctttgacg ctcttttgcg tggtaaaaaa gtagtggtat atggtaaacc tttttatgcg
    11821 ggctggggtt tgactcaaga tttacatcac atctcaagac gcacaagagt gcttagttta
    11881 gaagagcttg tggcaggagt tttgatcctt tatccaagat atattcatcc aaagagtaaa
    11941 aatttatgtg aagttgagct tgctttggat ataatgcttg ctttgcaaaa agattatttt
    12001 tcaaaaagat ggctaaaaat tttaattgat tttagaattt taatgcttag aaagataaga
    12061 agaataggtg aagtttttat aaaaagatga aatttagcga taagattaaa aaagaattta
    12121 gcggtaaaac tgtcttgctt ttacaaggac ctgtaggcac tttttttcac cgccttgcta
    12181 taaagatgaa aaaaaataaa accaaagttt ttaagcttaa ttttaatgga ggggattttc
    12241 ttttctatcc aagcggaaaa aggtgcaagt gcgacgaaaa ggatcttgaa aatttctatg
    12301 agaacttttt taaagaaaaa aagatagatg ctattgtgat gtataatgat tgtcgtttga
    12361 ttcatgcaaa agctatcaaa gtagctaagg agcttggcat tggtatttgg atttttgaag
    12421 aggggtattt aaggccttat tgtatcactt ttgaaaaaga tggggtcaat gcaaactcct
    12481 ccttgcctcg cgataaaaat ttctatcttt cttgcaatat ttctacaaaa gaaagcataa
    12541 aagaaattcc aggtggtttt aaatttatgg cttttagtgc ttttttgtat tggctttttt
    12601 cttttctgct agctcctttt tttaacaaca agcttcatca tcgcacctta tttccttttg
    12661 aatttttatt ttggtttaga tctttatata gaaaatatct ttataaactc acagaaaaaa
    12721 aacttaatca aaaaatttat agccttgaaa aaaagtactt tttggctatt ttgcaagttt
    12781 atagcgatac acagattaag caccattata aaaaaagcat agaagaattt atagaagagc
    12841 ttatcctttc ttttgcaaat cacgcaagag caaagtctta tcttgtcttt aaacatcatc
    12901 ctatggacag gggatataga aattattcta aactgataaa tgagctaagc caaaaatacc
    12961 atgtagaagg aagaatttta tatgtgcacg atacttattt acccactctt ttaaaaaagg
    13021 ctttgggttg catcacgatt aattctacag tgggtttaag tgctattttg gagggctgtc
    13081 ctactaaggt ttgtggcaat gctttttatg attttgaagg cctagcttat cctaaaaaac
    13141 tccaattttt ttggcgcgaa gctcatgctt acaaacccaa tcctaatttg gttttaaatt
    13201 tcaaaaacta tcttttaaat acaaatcaat tcaacggcaa tttttacaaa aattcttttt
    13261 taagtcgata aaagtccgat taagacagct tttaaaacaa aatgttataa tccttgaaaa
    13321 aaagaaaatg aatttttatg gatagagaag tattttatat agcaggctat gatcctaaga
    13381 gctatagatt ttattatgat ttatttaaga agaatttaaa agattattct catagatttg
    13441 atcttaaagc ggacttaagc gggattgaaa agaatggaaa ctttccattt tttaagataa
    13501 attgtgaaaa cactcaaaca cgctatcatt ttttaacttg gaatgatata gttaaaaaaa
    13561 attggtctca aagttataaa gatgctttga tggattgtta tagttttttt agaatttata
    13621 ccattactgg gctttttctt aaatttggta aagaatcgat ttatcagcta gttacgggtt
    13681 attatccttt cttttatgtt attttttctt tgttattatc tttaggctta gctttgggaa
    13741 gttttgtttt tttgcaaaat catatccctt cttttttggc gattgttata ggtatagttc
    13801 taggattttt actcaatcgt tttttattca agctaggtag aaaattggct gtattttgga
    13861 tagcaaggat atgtgctttt tgtgctactt ggaaagagaa aagattgggg gctatggagc
    13921 aaaggataaa gctttttgca gatgaaattt taaagtcttt aaaacaaaat gaaaacaggc
    13981 aagattacga acttatctta gtagctcaca gtgttggaac catagtttgc atagaagttt
    14041 tagagcatat tttaaaacaa aatttagata aaagagtatt ggacaaatta aaaattctta
    14101 cactaggaga atgcattcct ttaacaagct atcaaaaaaa ttcggatgat tttagaaaaa
    14161 aacttgaatt tgtttctgca tttgatttaa aatggtatga ttatacctca ataatcgatg
    14221 gggcgtgttt tccacaagtg gattttttcc gcacaagcgg ggtgcaagct aactttaccc
    14281 caccgttttt aagtgctaaa tttcatacct tgtatgaaaa aaatgaatat aaaaaaatca
    14341 aaagagataa aaataaagca cattttttat atctttatag tcctcatatt aaagggagtt
    14401 atgatttttt tgctttcgtt gtggcaccta aatttttaga agaaaaggta aagatatgag
    14461 tcagtgtcca ttttttccca aaccctataa aaataaagct tcaacacttt taaccttttt
    14521 attaaaacgc agatcatggc ttgatggtct ttatgagcgt agctataaaa tgcaaacagg
    14581 ttatgtaaaa atgccaaatt ttgatcttta tgtgatcaac gatactaaag aagttaaaag
    14641 aatgatggtg gatgaggtta aagaattccc aaaaagtgca tttttacatg agcttttaag
    14701 ccctctttta ggggagagca tttttacaac aaatggtgag gtttggaaaa agcaacgcga
    14761 acttttacgc ccaagttttg aaatgactcg tatttcaaag gttttcaatc tcatgagtga
    14821 agcagtaagc gatatgatga agcgttttga aaaataccct aatgcttcta ttatcgaagt
    14881 ggatgagact atgactttca tcactgctga tgtcattttt cgtaccatca tgtcttctaa
    14941 gttagatgaa gagcaaggaa agaaaatcct agatgctttt gtgacttttc aagaacaaag
    15001 cgtacatacg gctatgcgtc gtatgtttcg tttccctaaa tggctttctt atgtgttggg
    15061 tgatcgtaag cgtgctaaag cgggcgatgt gatcaggcaa gctttaagtg atatcataaa
    15121 gccaagatat gatgcagtaa gtagcggaaa agctgaaaat tttgaggata ttttaggctc
    15181 tttactctta gtagtagatg cgcagactaa tcaacgcttt tcttttgagg aaattctaga
    15241 tcaagtggct atgcttttct tagcaggtca tgaaacaaca gcaagctctt taacttggac
    15301 gctttatcta ctcagccttt atcctgatga acaagaaaaa gcttataaag aaattattca
    15361 agttttacaa ggtgaaaata tacaaatttc acatttaaaa cagtttagat acctaactca
    15421 tatttttaaa gaatctttaa gactttatcc tcctgtaggc ttttttgcaa gagaagcaaa
    15481 aaaagataca aaggtaaggg ataagatgat taaaaaaggc tcaggtgttg ttatagcacc
    15541 ttggctgata cacagacatg aaggcttttg ggctaatccg catgaattta aaccttctcg
    15601 ttttgaaggc gagtataaaa aagatgctta tttacctttt ggagtaggag agagaatttg
    15661 tataggtcaa ggttttgcga tgcaagaggc tattttaatt ttggccaata tcttaaaaaa
    15721 atacaaatta gagcttgaag agggttttgt tccagatgtg gtgggtcgtt taaccatacg
    15781 ttctgcaaat ggaatgagga taaaatttag taaaagagag ccatgaaaag agtcaaagca
    15841 agaattcgtg ccaattttcg caaccgcatt aagcgcaatc taaaaggaag tttaaaagaa
    15901 aaactagcag ggacgatctt actttgcgcc atagtacctt tggcaatttg tggatattta
    15961 ctcatagtga tagtgggaac tttttttaat acagctagag caaggcaagg tgtaagagct
    16021 ttggatcatt ttgtaaatgc aagtttgttt aatggctatg cttgggaaag tgtatcttca
    16081 cacgcgtggc gcgaaagaaa tagaaaaaaa tgggcaaggg tagtgattaa aatcacagat
    16141 ttttttcaaa aagatcattg caaaagagcc aataaaagag aacaacctgt cgttgatttt
    16201 atactttcaa gaaatttaga taaacaaact ataggtaaga gataaaatta atccaaagca
    16261 actactgcaa tagcaaaacc attatcatgt gagatgctaa gagaggtaga attgatttta
    16321 aatttttcta atacatgaga agcgagtttt aaatgaggag catttttgct gtcttttgaa
    16381 atttctatat ccaaaaagcc acattctttt gaaattccta cgcctaaagc tttacttgct
    16441 gcttcttttg cagcccaaaa acctgctaaa gttgagctag attttatcaa tttttgctca
    16501 ttttggttta gaaatttatc aagaaaagcg ttgccatgct tttgatagat tgtatctatc
    16561 ctagaaatgg caactatatc gcaacctata cgcatcaaga aactacaaaa tcagtaaaat
    16621 aaacattttt gatgaagcca tcggtaagaa tttcgttgat ttttccaaca agctcatcct
    16681 taagtctttc tttgcctttt tgcgtgctaa cctcttcaaa ggtttttgca gttaaggtgc
    16741 ggataatgat atcgcgaatt accgctactt ttttatcaag ctcaggtttt aaaagctctg
    16801 tattttgctc taattctata gtgcatttta catatcttga gccgctatca ctaagtaaat
    16861 ttaaagtaaa aggatcaaga ggatacatag gtcctatatt tgcaaaatca cttccacgtt
    16921 gcgccggtgc tgtcacttta gccttatcgg tttttgcctc ttcttttgga gctgctttga
    16981 cttcgctttc atcgcttgag ctacttgaaa taagccatgc aatcacaccc atgatgctaa
    17041 gaagtagaac aaaaagtaaa atcactataa tgataacaag cgaaccgcct tttttctttt
    17101 tttcttcgtt attttctaat tcttcatcca ttaatttttc ctttatttag tgaaattaat
    17161 gtaaaattgt agcaaaattt tcttttctat ccaaatttta cattataaaa agaaatttat
    17221 taaaaagatt taaggaaaaa ttatgctaga tgtgattttt agagaatacg acatacgcgg
    17281 actttatggc aaagaactca atgaaaaaag tgtcaaagct ataggttttt gtttgggaca
    17341 aaccatgctt gcaaaaggtt gtaaaaatgt aagcgtgggt tatgatgcaa gatatagtgc
    17401 tgatgagctt tatagatatc tagttagcgg gcttaataaa gcaggcatgc aagtttacaa
    17461 cataggactt gtccccactc cacttggata ttttagcctt tatgagggta tgaaatttga
    17521 tgcaaatatt atgatcacag gttcgcacaa tccaaaagat tataacggct ttaaaatcac
    17581 cataggtaag gaaagttttt ttggagctga acttaaagaa ttttcaaaag aagtttataa
    17641 gcatttagag gatgagattg aagaaaattt agaggctcaa aaatacgata ttttaagtct
    17701 ttatgtgaat tttatgtgtg agcaatttaa ctttttaaag gattttaatt ataaatttgc
    17761 aatcgattgc tccaatggag ccgctggggt tgttatagag cctttagtaa aagctttaaa
    17821 tttaaaagct catgttatgt tttcaaatcc tgatggacaa tttccaaacc acgaacctga
    17881 tcctacagaa gaaaaaaatt tgcacgctat aaagaatttt ttaaatgaaa atcaagaata
    17941 tcctttagca tttgcttttg atggtgatgc agatagaatg gtagctttga gtaaaactca
    18001 tattttttgt ggggatgagc tttgttattt gtttgcaaaa aatattccta atcctagaat
    18061 tttaggcgag gtaaaatgct ctaaaaatct ttttgatgag gtggcaaaat ttggtactat
    18121 ttttatggga aaaacaggac attcaaatat taaaaaaatg atgaaagaaa aagatattga
    18181 cttagcagct gaagtaagcg gccatatttt ctttaaacac agatattttg gatatgatga
    18241 tggaatttat gcttttttaa gagctttaga acttgtttat aagggctatg atttagaaag
    18301 tatgatcagt gccttgccaa aactttacac tacgcctgag attaaaattc cagtaagcga
    18361 ggaagaaaaa ttcaaacttg tggatgaatt taaaaaagcg atagaaaagg gtgccttaga
    18421 aggagtaaag agtctttgtg aaatcgatgg agccaggatt gattttggtg atggatgggc
    18481 tttacttcgt gcgtccaata ccagccctta tcttatcacg cgttttgaag caagttcttt
    18541 ggagcaagca aaagaacttg aagctaaagt atttaaactt tttaatgata ttaaagaatc
    18601 ggtttaataa gtattttagg tttatttgta aatttagaga aaagcacgaa aacaagagct
    18661 ttttctcatt tatataacgc gttgtttgtg tgagaatgta gtaaaaatat acactaaaga
    18721 tccactttta tgataaaaaa cttaaacaaa attgtgtgta catttttcct aaaagccttt
    18781 gatggtattt ttgccacaca tccaagcctt gaaaaacgca taggatattt agaaaaatat
    18841 tttggagatt cgttctaaaa atggcataat aattgcaacg attagtaaaa ttgcaaatac
    18901 caaacaaaaa agattttcta aaaaataaaa agttttgcct aaaaaagaat tttctaaatg
    18961 aaagggcaca aggatgataa agactactct aagtgggatt aaaatcattc ttatttgaag
    19021 gaaaaattta aaaaattccc aaaaatcact atcaaataaa ccaaataaga taattaaacc
    19081 aaaaaagaag agatatccgc ccaaaacatg gccgaattga aatttgaacg atatcttgct
    19141 tgacaatgag ggcaaaaaag ctcattggaa aactcaaaaa aatcataaaa tttgtttatt
    19201 tttttgaaat ttttagtgta ttttttgcat tttaagctta tgccttgttt tttttaagac
    19261 tttctaacaa ttcttctata ttgtaaattc ctcggtgctc aggtgttaaa agatggataa
    19321 gtatatcacc tagatcaatg acactccatt cttcactgct ttctatattt aaaaattctt
    19381 cacccttggc tttgagtttg gttttaagtt catcgattaa agataaggca tgtttttcac
    19441 ccaaggtagc tgcgatgatg acatatttta caaaataatc ttgctcgctc atatcaaagg
    19501 tttttatgtc ttcagctttt ttttcatcta aaattttaac gattaaatct actctttctt
    19561 gcattttttt cctttaaatt tttgaaattg tatcagtttt tttgtaattt ttcatagtaa
    19621 tttttcactt catttttaat ttcatcgcaa acttcatggg tatctagggt gcttcttatg
    19681 aaagatgagg cgatttttat attggttttt aaatctttaa aattttttgg aatttctata
    19741 tcattgcgat ttgcgatgat aaattctact aaagaattaa gtctttcaaa atcatgccaa
    19801 agatgaagtt tttctaaatg atccgcaccg attagaagat aaaatttgct aggatgataa
    19861 attttataaa gatattctac gctttcaatg cttggtacgg ggcgtttctg cttgatctca
    19921 aagtcgcaaa tttctacttt ttctaaattt ccccaaagtt tatttaccca agcaaatctt
    19981 tgtttttcat cggcaaaaaa tcctttttta aaaggattga taaaagtagg cacaataatg
    20041 agtttatcga tatcaagttt tgccaaagct tctttgataa tagcgtcatg tcctttgtgt
    20101 ggtgggtcaa aactgccacc aaaaagtgca attttcatta aaattttaac ctttttttag
    20161 taaaatatta gcataaaaaa cttcgcaaaa ggaaacaaaa tggccgtaaa agttgctata
    20221 aatggttttg gtcgcatagg aaggtgtgta gcaagaatta tttcaaaacg agatgatatt
    20281 gaacttgtag cgataaatga tactacagat atcgaactta caaaatatct ttttaaatat
    20341 gacacagtgc atggagaatt tgaaggcagt gtggaaaatg aaggggatga tttaattatc
    20401 aatggtaaaa aaatcaaagt gtttaaaagc cgcgatataa aagaacttga ttttgcaaaa
    20461 tacggtgcac aaattgtttt agagtgcaca ggggctcatt tgacaataga aaaatgccaa
    20521 ggatttttag atatgggagt gcaaaaagtg atcatgagtg ctcctgcaaa agatgatact
    20581 cctacttatg ttttaggtgt aaattcacaa aattataaag gtgaaaatat catctctaat
    20641 gcaagttgta cgactaactg tttaggtcct gtttgtcgtg ttttacaaga taatttcggc
    20701 atagaaaaag gactgatgac aactatacat gcttatacta atggacaaag cattatcgat
    20761 gcaaagacta aagataaacg ccgctcacgt gctgctgctc aaaatatcat tccaacttct
    20821 acaggcgcag caaaagcgat gaagcttgta atgcctgaac ttaatggcaa gcttcacggg
    20881 caaagtatgc gtgtgcccgt tattgatgtt tcaagcgtgg atttaaccgc tcaacttagc
    20941 aaaaaagtaa gcaaagagga gcttaatgaa gcctttagaa aagctgcagc tacaaattta
    21001 aaaggcattt taatggttga tgatgatgaa agggtatcga gcgattttat cacttgttct
    21061 tatggagcgg ttgtggtaag tgatttgacc caagttatag cagatgattt tgttaaagtt
    21121 gttgcttggt atgacaatga gtggggatac tcaagccgcc tagtagatat ggcagtatat
    21181 attgcaaata aggcttaaaa atgagtgata ttatttctat aaaagatatt gatctaagca
    21241 aaaaaaaagt ttttataaga tgtgatttta atgtccctca agatgatttt ttaaatatca
    21301 ctgatgacag acgcatcaga tcggctatcc ctacgataag atattgttta gataatggtt
    21361 gcagtgtgat tttagcttcg catttgggtc gcccaaaaga gatcagttct aaatattctt
    21421 tagagcctgt agctaagcgt ttagcaaggc ttttagataa agaaattgtt atggcaaaag
    21481 atgttatagg agaagatgca aaaagcaaag cagcaaattt aaaagcaagt gagattttaa
    21541 tgcttgaaaa tttgcgtttt gaaaagggcg aaactaaaaa tgatgaaaat ttagctaaag
    21601 aacttgcttc tatggccgag gtttatatca acgatgcttt tggggtatgt catagagcac
    21661 acgctagtgt agaggctatc actaaatttt ttgatgaaaa tcataagggt gcaggatttt
    21721 tactacaaaa agagattgaa tttgctgaaa atcttatcaa gcgtcctgca cgtccttttg
    21781 ttgctgttgt gggtggatca aaagtaagtg gcaagcttca agctctaaca aatctacttc
    21841 caaaagttga taaactcatc attggtggtg gtatggcatt tactttttta aaggcgcaag
    21901 gttttgatat aggaaattca cttttagaag aagagctttt agaagaagcc aataaaattc
    21961 ttacaaaagg aaagaattta ggtgttaaaa tttacttacc tgtggatgta gttgctgctc
    22021 ctgcttgctc tcaagaatca ccaatgaaat ttgtaccttc gcaagaaatt ccaagtggct
    22081 ggatgggctt agatataggt cctgcaagtg tgagactttt taaagaggtt atttctgatg
    22141 cacagaccat ttggtggaat ggacctatgg gtgtttttga gatcgataaa ttttcaaaag
    22201 gcagcataaa aatgagccat gctatcagcg atggacatgc tactactgtt gtagggggtg
    22261 gcgatacggc tgatgttgtc gcgcgtgctg gagatgcaga tgaaatgact tttatttcca
    22321 caggtggggg cgcttcgctt gagcttatcg aaggtaaaga attgccaggt gtaaaagtct
    22381 taagaagtgg gggagtgcaa tgatatttgc tgcaaattta aaatgcaatc atacaagatc
    22441 aagttttaaa atttatgcaa atattttaaa tcagtattta gaagcaaaaa acgatgatat
    22501 catcgttttt ccacctagta tagctttttt agaaaatgaa ttaaatttta tacaaggggc
    22561 gcaaaatttt tatccttgtg tcaatggagc ttttacaggt gaacttggaa aagagcattt
    22621 ggatgaattt ggaatcaaat gtgttttgat agggcattct gaaagaaggg ctttgggtga
    22681 tgaaaattta atcaaagcta aatttgattt tgctaaagag catgcttata aaatcgtttt
    22741 ttgcataggc gaggatttaa agcttaaaaa ctcaaatcaa accttagatt ttttaaaaaa
    22801 acaacttgaa gttattgacc tagattataa aaatctcatt atcgcttatg agcctattta
    22861 ctctatagga agtggtgtga gtgctaaaaa agaagatatt gctaaagtgc ttgaatttct
    22921 ttcttcgctt acgcaagctc ctttgcttta tggcggaagt gtaaatgagg acaatatcaa
    22981 agatatttta aatataaaac attgcagcgg tgttttaata ggatctgctg cattaaaagc
    23041 tgaaaatttt ataaaactaa ttaaaggata aatgatgata atgaaaggca aaaaaggcct
    23101 tatagtaggc gtagccaata ataaatccat agcttatggt atagcaaaag cttgttatga
    23161 gcaaggagca agtttagctt ttactttttt aaatgatgca ttaaaaaagc gtgttgagcc
    23221 tatagcagaa gaatttggat caaactttgt ttatgagctt gatgtaaata ataacgagca
    23281 tttagactct atcgctgaaa aaattaaaaa agatttaggt gagattgatt ttatagtaca
    23341 tgctgttgct tatgcgccaa aagaagcttt agaaaattca ttcttagaaa cttcaaaaga
    23401 agcttttgat atagctatgg gaacttctgt gtattcttta ctttctttaa cgcgtgcggt
    23461 attgccagta ttaaaagaaa agggtgcaat tttgacttta agctatcttg gcggggtaaa
    23521 atatgtgcct cattataatg ttatgggtgt ggcaaaagca gctcttgaaa gttctgtgcg
    23581 ttatttggca agagatttag gtatcaaagg aattcgtgta aatgcgattt cggcagggcc
    23641 tattaaaact ttagcagcaa gtggaatagg cgattttaga atgatattaa aatacaatga
    23701 aatcaatgct ccattaaaac gcaatgtaag tattgaagat gtaggaaatt cagcgatgta
    23761 tttactcagt gatttagctc gtggtgttac gggtgaggtg cattatgttg atgcaggata
    23821 taacatcatg ggaatgggag atgtcacaaa agacgaaaat ggaaatactg tgctttgttg
    23881 ggataatcaa aaaggacaat aatggcaaaa ctcagcaatg aagagttaaa agatatactt
    23941 ataaaacgca ttgaaaaaat cgaaaattca gacttggtag ataaaaaaac tatcaatgaa
    24001 gaaagcgtaa aggctcttgc taagcattta tctttgggaa atgaaattcc agctcttgcg
    24061 caaaagtttt tcgaacttgc tcctaagact aaggttgttt ggcttcatct ttgcgaatgt
    24121 acaggttgta gtgagagttt attgcgtgcg gatttaccaa gttttgatga attagttttt
    24181 gacttttttt ctttagagta tcacgaaact ttaatggcag caaatgggac aaaagctgaa
    24241 gaacttttag agcatgtttt aaaagaagac tttgttttag cggttgaagg cggtgttgca
    24301 gctattgata cattttttct tactataggt gcagagggtg agagtggtta tgaaattttg
    24361 gaaaaattag cagctaaagc caaagctatt tttgctgtgg gaacttgttc ttcttatggg
    24421 ggaattcaag ctgcttatcc aaatccaagc aaaacttgcg gtatttctga agttttaacc
    24481 caaaaagtag tcaatatccc tggctgtcct ccaagcgatg taaatatcat cgcaaccttg
    24541 acttattttg ctttatttgg aattttgcct gaacttgatg agcaaaaccg ccccgtttgg
    24601 gcttatggta aatgtttgca tgatttgtgc gaaagaaagg ctaaatttga gagtggaatt
    24661 tttgcagaac attttgatga tgaaaaggct aaaagtggag cttgtttatt taaaataggc
    24721 tgtaaaggtc cttatactta taataattgt cctaaagtaa aatttaatgc taaaacttct
    24781 tggcctgtgg ctgcagggca cggctgtata gcctgtagtg aaaagaattt ttgggatgaa
    24841 tttggaaatt atgaaaaacc tatggcaaat cctttttctt atgctaagct tgtaaatcag
    24901 gaatttagta cagaatttgc cctagaagag caaattcaaa tcctatcttc gatggatttt
    24961 gaatttgaaa gtaatttaaa gcttatcttg caaaacattg ctaaaaataa attaggtgct
    25021 ttacttgtag aaaattacaa aacatctttt gaaaaaaact ttatttttat agagcaaaat
    25081 tttgatgaaa atcctatgcc ttctagtgat atttggaagt attttgagat caattttatt
    25141 ttggcaaagg gtgagttttt acaagataaa aacgattttt taaaagcggc gcaaaattat
    25201 agctttaagc atgcaagtcc ttatgatttt aaacttactc ttaatgaaaa atcaaaactt
    25261 gatgtgagta aatcttttcg tatgcctttg atttatcttt gcggagggct tgattttgaa
    25321 gctcttgctt atagcgtttt gaaggctttt gaaaaaaata ttaaaagcgt gatagacttt
    25381 aataaacaaa aagcgggtta attgattaca aattttgtaa tatttaaccc tataaaagcc
    25441 actatatagg cgctgatgca agtaaaaaga aaaaggaaaa aagtatattt tatttttccg
    25501 ctttcttttg aaaagactat ggttgcagca aagcaaggat tataaatcat tacaaataaa
    25561 atatacgcca ccgcactagg caaaggaata tttttagcaa taattccttt taaatcatta
    25621 tttgtttcat ctacatcttt tcctagtgaa taaagtactc ccatagttga aatcattact
    25681 tctttagcgg ccaaaccact gattaaagat acgcttaatt tccaatctaa ctcaaggggt
    25741 ttaaaaatag gttctatgcc tttgccaaat tgtcctagat aactttgttc tatagctctt
    25801 tcttgagcgt taaaatcatt taaattttct tcattttttg gaaaattgct agcaaaccat
    25861 atgagcaaag aggccaaaag tatgaaagtt cctgcttttt taagatacat tttggcttta
    25921 ttataaacca taaaccaaac taaatgccaa tttggcatac gatattttgg catttccatc
    25981 acaaagggtt catcaatacc gcgaaatgca gtggatctta agaatttggc cgcaataagc
    26041 cctaaaatag cacctagaag ataaattcca aaaaggtaat tccccgcttc ttcacttgga
    26101 aaaaaagcac cgataaaaag cacatataca ggaagtcttg ccccacaact cataaaattg
    26161 atcacaaaaa gagttaaaag cctatctctt ttgttcttaa gagtgcgtgt agccataaaa
    26221 gcaggtaccg aacaaccaaa gccagtgatt agtggaataa aacttttacc atgcaaacca
    26281 aatttatgta aaatcccatc aagtaaaaaa gctactcttg acatatagcc tgtggtttct
    26341 aaaagagcta tgcctaaaaa taaaatcatt atattaggca aaaaaagtat cacagcacca
    26401 acacctgcga taatcccatc agccaaagct gaagcgatga aggtattaga aatattgttt
    26461 ttaacaaatt cacctaaggc attaaagcct gattctatat aatccatagg aatttgtcct
    26521 aaactaaagg tgagttgaaa taaaagccac attaaaaata aaaatatagg taagccaaag
    26581 aatttatgga taagtaaggc atcgattttt ttggttaaat ttctttcttc ttttttgtgc
    26641 gtgataattt tttttgaaag ttcattaata aaatataata aatcttcttt ctctggactt
    26701 ttttcacaaa gtggagtata aaattgagat cttggaataa atttactttc aaataaaata
    26761 ataatttttt gcagcaaaag ttctaaattt tcttttgttt ttgctgaaat ttcaacaact
    26821 tgactttgaa attcttggct taaaacagaa gtgtcaagct ctataccttc ttttttggct
    26881 tcatcgcaca tatttaaagc caaaagcatt tttttattaa ggcttaaaag ttctgcacta
    26941 aggataagat tgcgttctaa attggtggca tctaaaacat taacaataac atcatagtca
    27001 ttttgattta aaaaatgacg tgtgattttt tcttcttcgc tatatccatc taaagaataa
    27061 gttcctggta aatcaatgac ttcaaattca tagtttttgt aaaaagtttt tgcacttgct
    27121 ttttctatag taactccgct aaaatttcct actttcatat tagctttgca aagcgcatta
    27181 ataagaagac ttttgcctac attaggctga cctacaaggg ctattttgat ttttttcata
    27241 taagattcac ttctatggtt ttagcttcat cagatcttag gataacacaa cttgtatcaa
    27301 gttctaccat tatggtggca ttttttaaag aggagtgaat ttttttcaag tttttatttt
    27361 taataaatcc aaagcttaaa agtctatttt tgagttcttt gtgagcgttt aaattgacaa
    27421 taatagcttt ttgtccatct tttaactcgt ttaaagtcat tgtaattcc
//
LOCUS       DBBXOW010000015        25049 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.015, whole genome shotgun sequence.
ACCESSION   DBBXOW010000015 DBBXOW010000000
VERSION     DBBXOW010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25049
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.015"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(50..1927)
                     /gene="dxs"
                     /locus_tag="ACJE1S_000642"
     CDS             complement(50..1927)
                     /gene="dxs"
                     /locus_tag="ACJE1S_000642"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HGG0806209.1"
                     /translation="MNEIIKKDYQFAYTKEELEKLNLTQLEDLAARIREKIIDVVSKN
                     GGHLSSNLGAVELTIAMHTVFDNGIDPLIFDVSHQSYTHKLLSGKENVFESLRQFGGL
                     SGYTKPNDGDYFVAGHSSTSISLAVGACKAIALKGEKRTPVALIGDGALSAGMAYEAL
                     NELGDSKFPCVVILNDNEMSISKPIGAISKYLSQAMATQFYQNFKKRVAKMLDALPDS
                     ATYMAKRFEESFKLITPGLLFEELGLEYIGPIDGHNLSEVISALKQAKAMQKPCIVHA
                     QTLKGKGYSLAEGKNAKWHGVSAFDVDSGESVKKSDTKKSATEIFSKNLLDLASKYEN
                     IVGVTAAMPSGTGLDKLIEKYPNRFWDVGIAEQHAVTSMAAMAKEGFKPFIAIYSTFL
                     QRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGAFDVSFLAPLPNLTLIAPRDE
                     LMMKNIMEYAYTHEGCLAFRYPRGSFILDEEFNPTKIELGKAQWLVKNQSNIAFLGYG
                     QGVGKAWKVLRKLQDEGQNANLIDLIFAKPLDKLLLKELAKQSQIWFVFSENARIGGV
                     ASLLESFVQENDLKIKIVSFEYEDSFIEHGKTNEVEKALKLDIDGLVQRVKINWVDNI
                     L"
     gene            complement(1920..2750)
                     /gene="fliH"
                     /locus_tag="ACJE1S_000643"
     CDS             complement(1920..2750)
                     /gene="fliH"
                     /locus_tag="ACJE1S_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HGG0806210.1"
                     /translation="MVNRSNVISGGTSDQHVVEGYRFKVISEFDNHAEEKQHSQISNE
                     ENITTSSKDESPVEESQTPAPSQVVQEVQTPAFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELESAKEKFSKEGYEQARAEFEKELNDLRDKYLKSVSKLEEACV
                     NLNAFIEKNEKELADTAIDIAKEVILKELENNSSKIAYALAKDLINELKGAGSIEIKV
                     NSIDYNYLKEHFSENSHIKITLDDAISKGSVIILSDSGNIESNLNARLIKIKKMVNNE
                     "
     gene            complement(2758..3786)
                     /gene="fliG"
                     /locus_tag="ACJE1S_000644"
     CDS             complement(2758..3786)
                     /gene="fliG"
                     /locus_tag="ACJE1S_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HGG0806211.1"
                     /translation="MIKLSEEQKMLYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIATAKNVDRAVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            complement(3786..5468)
                     /gene="fliF"
                     /locus_tag="ACJE1S_000645"
     CDS             complement(3786..5468)
                     /gene="fliF"
                     /locus_tag="ACJE1S_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HGG0806212.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSGANNGYAVLVDNVDPSSSAAIVAKLEQNNVPYILESESKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQSFGATNEEQRVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAIPKLTKENVRISDQSG
                     VPLDEQEAYEDDLVRAQIKYKSDQERALEDKIIETLAPYAGGTDKVRVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKEPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVVRTSAAVTIDGKYQDVVDENGDVKSEYVPLSKEE
                     LASVESIVKNTINYSANRGDSVVVQNLPFHRESIRVESKVKTFYGRFIEPFIPPVKYI
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEVQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGENFNEDSIQYEVLLEKLRGLVSDKSEEIAALLQNLIQNDTEFGEKDM"
     gene            complement(5552..6646)
                     /gene="hisC"
                     /locus_tag="ACJE1S_000646"
     CDS             complement(5552..6646)
                     /gene="hisC"
                     /locus_tag="ACJE1S_000646"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HGG0806213.1"
                     /translation="MKFNDFLNHLSNYEPGKDIEVIAREYGVKEVIKLASNENPFGAP
                     PKAVKVLQENAFKANLYPDDSMVELKGELAQKYNVKNENIIIGAGSDQVIEFAIHSKL
                     NPQNAFLQAGVSFAMYEIYAKQCGAKCYKTQSITHDLSEFKTLYEAHKDEIEIIFLCL
                     PNNPLGECLDTNEVFEFIRGIDENCLVIIDAAYNEFASFKDQNKYLKPCDLVQEFKNV
                     LYLGTFSKLYGLGGLRIGYGIANAEIISAFYKLRAPFNVSNLALKAAVAALHDEEFAK
                     KTLENNFSQMELYKEFAKKHHIKFIESYTNFITYFFEEKNSTDLSEKLLKKGIIVRNL
                     KSYGLNAMRITIGTPYENERFFTEFEGILK"
     gene            complement(6633..7715)
                     /gene="pheA"
                     /locus_tag="ACJE1S_000647"
     CDS             complement(6633..7715)
                     /gene="pheA"
                     /locus_tag="ACJE1S_000647"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HGG0806214.1"
                     /translation="MPNLNLEDFRNKIDMVDDKILELLNERMSYVKSIGEIKQTSGGA
                     IYRPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQIVAYLGPEGTYTH
                     QAARSRFGAMSRYIALATIEDVFKELSNKEAKYGVVPIENNTEGAVGVTLDCLGKYNE
                     LKIFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSNIEFVPSKST
                     ANAAYLASQDKYSAAICSKIAAKLYNVPVLFDKIEDNAANRTRFLILSDIKNPKMPNC
                     KTSILAHTAHKPGGLSSLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDEN
                     VQRALKNADEVVWLGSYLSGEKNEIQ"
     gene            complement(7703..8470)
                     /locus_tag="ACJE1S_000648"
     CDS             complement(7703..8470)
                     /locus_tag="ACJE1S_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HGG0806215.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVLEILKDLKCQI"
     gene            complement(8472..9680)
                     /gene="lysA"
                     /locus_tag="ACJE1S_000649"
     CDS             complement(8472..9680)
                     /gene="lysA"
                     /locus_tag="ACJE1S_000649"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HGG0806216.1"
                     /translation="MDYKKLKDEFQTPFYIYDFDFIKERFLKLKNAFKARKSQIFYAV
                     KANSNLSLLQMLVKLDSGFDCVSIGEVKRALKAGAKSYKIIFSGVGKTQEELRLALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVNAKTHPYISTGLNENKFGVEI
                     DLARKMYLYAKNSPHLEPIGVHFHIGSQLLDISPIHEAAAIVAKLVRELKALQIELKF
                     FDIGGGLGVRYEKEDVEPDLYDYAQGILAQLHGLDVTIGMEPGRFLVANSGEFVCSVL
                     YEKHNKTKRFVIVDGAMNDLIRPSLYEAYHEILLPYNQGEESPCDVVGGICESGDFFA
                     KARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            complement(9722..10780)
                     /locus_tag="ACJE1S_000650"
     CDS             complement(9722..10780)
                     /locus_tag="ACJE1S_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HGG0806217.1"
                     /translation="MWIFVRFISGIYLKNFFIIFLSLLGFYCGIDLLLNFNDLPDAAN
                     LSLLYVIFLAFSAVTYVLPVSLIFALVLSLVSMIRANEFVSLYALGLSKNLVIIFPFL
                     WALFFCFVYVGLNFTPFAYANDYKRNILKNGTMLKQSGEVFLKFNNEFIYISKVNNGQ
                     STAQNIKIFNIKDLNLSSFIEAKSGIFEKKNWILKEGNLTLLPKEYELGNKGLNISEF
                     KELNTLEGFKPKIIEGVASDSDYSILDILESLELFKTQNISIESLKISLYKLVFMPFF
                     APFLMLIMYYFFPVIARFFNLAFVAFVAFVVTLLTWGMLFLLSRLSENGVILSELGIV
                     MPIVLLIFLGGFMFYKHR"
     gene            complement(10782..11324)
                     /gene="pth"
                     /locus_tag="ACJE1S_000651"
     CDS             complement(10782..11324)
                     /gene="pth"
                     /locus_tag="ACJE1S_000651"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HGG0806218.1"
                     /translation="MILVVGLGNIGKEYEDTRHNVGFMLIDLLLKEGNFTNLTNSKFK
                     GELFKMGSSLLLKPHTYMNNSGLSVKAVNDFYKCERIIVVHDDIDINLGALRFKRGGS
                     SGGHNGLKSIDNLCGSDYERVRIGVGKGENVISHVLGKFRAEEELILSKVLEHSKKAL
                     LELIRNDDLSAISSKYSLKA"
     gene            complement(11321..11857)
                     /locus_tag="ACJE1S_000652"
     CDS             complement(11321..11857)
                     /locus_tag="ACJE1S_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HGG0806219.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            11991..12329
                     /locus_tag="ACJE1S_000653"
     CDS             11991..12329
                     /locus_tag="ACJE1S_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HGG0806220.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            12333..12647
                     /locus_tag="ACJE1S_000654"
     CDS             12333..12647
                     /locus_tag="ACJE1S_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HGG0806221.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLVLIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKCFLKLFLIAVIITCTAGLKF
                     LS"
     gene            12657..13262
                     /locus_tag="ACJE1S_000655"
     CDS             12657..13262
                     /locus_tag="ACJE1S_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HGG0806222.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINILALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(13249..14532)
                     /locus_tag="ACJE1S_000656"
     CDS             complement(13249..14532)
                     /locus_tag="ACJE1S_000656"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HGG0806223.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKITNAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKPLLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYQAGFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFRKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            14600..15742
                     /locus_tag="ACJE1S_000657"
     CDS             14600..15742
                     /locus_tag="ACJE1S_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HGG0806224.1"
                     /translation="MSLKNILETLEKNHNLRKLTSLKHEGNFVFKEGKKLLNLAGNDY
                     LNLSSCKSLKDEFLDNIKEQDLFFSSSSSRSLSGNFTIYEELESFLKSKFKEKEILHF
                     NSGYHLNISCIAALASIPNTLFLADKFIHASMIDGLKLGGVKFFRFYHNDMNHLENLI
                     QKHYDHYENIIILSEALFSMDGDFSDFNTLIAFKEKYPKIKLYIDEAHSVGCFDEEGL
                     GLVKALNLEEKVDFIVFTFGKALASMGACMICNNLYKSFFINKARAFIYSTALPPINI
                     AWTKFIFEKMSELKEKREKLQIIGNFFKNQLIEKSHQILGDAYIISLVLGENQKAIEL
                     AKKLEVNGIFAPAIKEPTVPKNTARIRFSLHAGLSKEDLKKVVELL"
     gene            15739..16350
                     /locus_tag="ACJE1S_000658"
     CDS             15739..16350
                     /locus_tag="ACJE1S_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HGG0806225.1"
                     /translation="MKISNLIQNENSQELILVFGGFASHPSHFAHLKSDKNVVLVYDY
                     ENLDFKFDLNSFSKITLIAFSMGVCVASRVLKNIEFSQKIAINGTPFGIDKLKGIHPA
                     IFAKQIKKFDLTAFKKSLFKERENEAKDFIFKDEKDLKTELEKLFEFALKERNESFIW
                     DKIYSSNHDEIFPQNALKNTFSKLIFLDEPHFAFFHFKTWDEI"
     gene            16347..17033
                     /gene="bioC"
                     /locus_tag="ACJE1S_000659"
     CDS             16347..17033
                     /gene="bioC"
                     /locus_tag="ACJE1S_000659"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HGG0806226.1"
                     /translation="MNFLKAKDYQKHAKVQDLMGLKLCEILKNLEISHFKKVFEFGCG
                     RGEFSDKLSKIITFDEYLKNDILDYPDNLNVEIFDMNTLATQNLSKQKFDLITSNASL
                     QWLDLKQVLPTLANMLNKKGILLLSTFGEMNLKEIKQSTSLGLKYFSTKELEQIFKPY
                     FSDIKITEEIVNLEFQNALEVFRHLKLSGVNSLGFYRLNKQFLKEFEEKFQNKLTYHP
                     IFILCKKDTK"
     gene            17087..17836
                     /gene="modA"
                     /locus_tag="ACJE1S_000660"
     CDS             17087..17836
                     /gene="modA"
                     /locus_tag="ACJE1S_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG0806227.1"
                     /translation="MKKLVLCFIVLFLSLNLNAQNLSVFVASSASKAMEEVKNEFLKS
                     HPNDNIDLVFGASGKYYQLLKQGREFDLFFSADTKYAQAIYEDQNALDKPKVYVLGIL
                     ALYSLDESLLEGGIEKLKDKANKIHHLSLANPKVAPYGVAAKEVLENLNLDKLFEDKI
                     VLGENISVPVLHVDSNNADLGIVAYSLVSSINHPKGKAILIDQKYFTPLKQSYVITKY
                     AKDKKLAFEFSDFISSQKAKEIFKKYGFDTP"
     gene            17833..18234
                     /locus_tag="ACJE1S_000661"
     CDS             17833..18234
                     /locus_tag="ACJE1S_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HGG0806228.1"
                     /translation="MNILNGKIIELLNEGEIVIVKISIKEQIFKVLMLDLHSLQDLKI
                     GTKIQVLFKEHELGFTLPHSILSVENSFLARIKSIKKGKILYHIFFDFEGDEISSIIT
                     KEKALELKLEEGQEWLCFVKENDIILKAVYG"
     gene            18227..18895
                     /gene="modB"
                     /locus_tag="ACJE1S_000662"
     CDS             18227..18895
                     /gene="modB"
                     /locus_tag="ACJE1S_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HGG0806229.1"
                     /translation="MDNDFLQTLYLTFKLAFITTFMLFFIGVFLAYLLSFVKFPFKSL
                     VQTFVALPLVLPPSVLGFYLLISFSQNSFLGQFLKEYFNLSLVFSFEGLVFASLIFSL
                     PFMVNPLQSAFSSINQNLLDASYTLGKGKIYTLFRVILPNSKVGIFSACAMSFAHTIG
                     EFGVVMMIGGHKKGETLVASIAIYDELEVLNYTLAHQYAFTLFAISFTILLSLYFVNK
                     KIAL"
     gene            18905..19789
                     /locus_tag="ACJE1S_000663"
     CDS             18905..19789
                     /locus_tag="ACJE1S_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HGG0806230.1"
                     /translation="MIKIDIKLPINTAKGKKQLELNTCLKANEITAIFGESGAGKTTL
                     LKIIAGLIKPEFGRIEVGDELWFDTQKNVNLAIQKRKIGFVFQDYALFPNMSVKENIS
                     YAATSKQKAEELLSLMNLENLAKIYPKNLSGGQAQRVALARALAREPQILLLDEPLSA
                     LDFKMRSFLQDELVKILQHFKITTLLVSHDLAEIYKLSHRILELSDGKIIKDARTNEF
                     FTSSNLSAKLRLSATLLEMKKSDILVIFTLLLNQDIVKITLSEEEFLKSYKDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(19884..20135)
                     /locus_tag="ACJE1S_000664"
     CDS             complement(19884..20135)
                     /locus_tag="ACJE1S_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG0806231.1"
                     /translation="MKDDFSNSSEKEILNFYKKVSSNIRKFREQKGISQLELALDIGI
                     KSVAFYSNCECNRYGKHFNLEHLYKISKSLEIPLKDLLE"
     gene            20226..20603
                     /locus_tag="ACJE1S_000665"
     CDS             20226..20603
                     /locus_tag="ACJE1S_000665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806232.1"
                     /translation="MKFYNVITMVIFILFFAGCSVSGMITADHNGKMYWVPADCPRYK
                     YFYNEPDKLICTDSNGIETGRILYPADEQQIANYRYEQQRQDEISQRNMEQLRQNTEN
                     LKEINRHFYENFMPKRHDVYIHY"
     gene            20958..21782
                     /gene="panB"
                     /locus_tag="ACJE1S_000666"
     CDS             20958..21782
                     /gene="panB"
                     /locus_tag="ACJE1S_000666"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HGG0806233.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            21793..22641
                     /gene="panC"
                     /locus_tag="ACJE1S_000667"
     CDS             21793..22641
                     /gene="panC"
                     /locus_tag="ACJE1S_000667"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HGG0806234.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            22638..23018
                     /gene="panD"
                     /locus_tag="ACJE1S_000668"
     CDS             22638..23018
                     /gene="panD"
                     /locus_tag="ACJE1S_000668"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HGG0806235.1"
                     /translation="MNITLLKSKIHRASVTEARLDYVGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEVKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(23177..23587)
                     /locus_tag="ACJE1S_000669"
     CDS             complement(23177..23587)
                     /locus_tag="ACJE1S_000669"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG0806236.1"
                     /translation="MLRKTDIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEG"
     gene            complement(23571..24230)
                     /locus_tag="ACJE1S_000670"
     CDS             complement(23571..24230)
                     /locus_tag="ACJE1S_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG0806237.1"
                     /translation="MMNDRFTRIKWLVSEENFNKISQTKVLVCGLGGVGGMCVDALYR
                     SGFQNLTLIDADKFEITNQNRQIHSENLGEEKAKVFARIYNAKGIVSKIDNEFLANFD
                     LSEFDLIIDAIDDIPAKVALANLIDFKRQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     N"
     gene            complement(24220..24996)
                     /gene="surE"
                     /locus_tag="ACJE1S_000671"
     CDS             complement(24220..24996)
                     /gene="surE"
                     /locus_tag="ACJE1S_000671"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HGG0806238.1"
                     /translation="MKEILITNDDGFESEGLKKLIKMLKKEFKAKITIVAPATEKSAC
                     SHSITLTKPLRFIKVGKRFYKLDDGTPADCVYLALHALYKTRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDFKNALKITKKIVQNIFDKGFP
                     LGKKEFLNINFPAKSNIKGIKICKAGKRVYNFEAHSNINPRGVEYYWLAAANLDFEDE
                     KDSDIALLKKGYVTITPIMLDLSAYDKMKKVKKWLKANNE"
BASE COUNT         8402 a         4357 c         3625 g         8665 t
ORIGIN      
        1 ataagaagct atgaaatttt aaacattttt ttgttgtttt ggttcaaatt taaaggatgt
       61 tatcgaccca atttattttt accctttgca ccaaaccatc aatgtcaagt tttaaagctt
      121 tttccacttc attggttttg ccgtgctcaa taaaactatc ttcatattca aaagaaacaa
      181 ttttaatttt taaatcattc tcctgtacaa agctctctag caaactcgcc acaccaccta
      241 tccttgcatt ttcgctaaaa acaaaccaaa tttgactctg ttttgctaac tcttttaaaa
      301 gtagtttatc taagggttta gcaaaaatca aatcaatcaa attagcattt tgcccctcat
      361 cttgcaattt tcttaaaacc ttccaagcct tacccacccc ttgtccataa cctaaaaaag
      421 cgatattgct ttgatttttt acaagccatt gcgcctttcc aagttctatc ttggtagggt
      481 taaattcctc atctaaaata aaagatcctc taggataacg aaaagccaaa catccctcat
      541 gggtataagc atactccata atatttttca tcataagctc atctcttgga gctataaggg
      601 ttaaattagg caagggagct aaaaaactta catcaaaagc tccttggtgg gtttctccat
      661 cttctcctac tatacctgcc ctatccatag caaaaaccac atttaaattc ataatcgcac
      721 aatcatggat aacttgatcg taagcgcgtt gtaaaaaagt gctgtatata gcaataaaag
      781 gtttaaatcc ttctttagcc atagccgcca tagaagtaac agcgtgctgc tcagcaatac
      841 ccacatccca aaaacgattt ggatattttt ctataagctt atcaagacct gttccacttg
      901 gcatagccgc cgtaactcca acaatatttt catattttga ggctaaatca agcaaattct
      961 tagaaaaaat ttcagtagca gattttttag tatcactttt tttaacactc tctccactat
     1021 ctacatcaaa agcactgacc ccatgccatt tagcattttt tccttcggct aaactataac
     1081 cttttccttt taaagtttgc gcatgaacaa tacaaggttt ttgcatagcc tttgcttgtt
     1141 ttaatgcaga aataacctca cttaaattat gtccatcaat aggtcctata tattcaagac
     1201 ccaattcttc aaataagagt cctggggtta ttaatttaaa gctttcttca aaacgcttag
     1261 ccatataagt agcagaatca ggtaatgcat ctaacatttt agccacgcgt tttttgaaat
     1321 tttgataaaa ctgcgttgcc atggcttgag agaggtattt tgaaattgca cctatgggtt
     1381 ttgaaatact catttcatta tcatttaaga taactacaca aggaaattta gaatctccta
     1441 attcattcaa ggcctcataa gccatacctg cacttagagc tccatcgcct atcaaagcta
     1501 caggagtgcg tttttcgcct tttagtgcta tggccttaca ggctcctaca gctaaagaaa
     1561 tagaagtact tgagtgtcct gctacaaaat aatccccgtc attaggcttg gtatacccac
     1621 taagcccacc aaattgacgc aaagactcaa aaacattttc ttttccactt aaaagcttat
     1681 gtgtgtaaga ttgatgggat acatcaaata taagaggatc tatcccatta tcaaataccg
     1741 tgtgcatagc tatagtaagc tcaactgctc ccaaattgga gcttaaatgc cctccatttt
     1801 tacttactac atcaataatt ttttctctaa tgcgagccgc taaatcttca agctgggtta
     1861 aatttagctt ttctaactct tctttagtat aagcaaattg ataatctttt ttaattattt
     1921 cattcattat taaccatttt tttgatttta ataagacgcg cattcaaatt ggattctata
     1981 ttgccactat cgcttaaaat gataacacta cccttgctaa tagcatcatc aagagtgatt
     2041 ttaatatgag aattctcact aaaatgctct tttagataat tataatctat agaatttact
     2101 tttatttcaa tagaacctgc tcctttaagc tcattgatga gatctttagc taaagcataa
     2161 gcaattttgc ttgagttatt ttcaagctct tttaaaataa cctctttggc aatatctata
     2221 gctgtatcag caagttcttt ttcatttttt tcaataaaag cattaagatt tacacaagct
     2281 tcttctaact ttgaaacact ttttaaatac ttatcgcgca agtcatttaa ttctttttca
     2341 aattcagctc tagcctgttc ataaccctct ttagaaaatt tttccttagc gctttcaagc
     2401 tctgaattta agcggttatt aaactcattt tcttgacttt caatttgcat ttgaagctta
     2461 atgatattgc ttgacatttc atctgttttt ttaagcaaat cctcaacaaa actaggttga
     2521 aatgcaggag tttgcacctc ttgtactact tgagagggtg cgggggtttg actttcttcg
     2581 acaggacttt catcttttga agatgtagtt atattttctt catttgaaat ctgtgaatgc
     2641 tgcttctctt ctgcatggtt atcaaattct gaaattacct taaaacgata tccttcaaca
     2701 acatgttgat cagaagttcc tcctgaaata acattactac gattaaccat cactcaccta
     2761 ctctatcatt tcatcagcat cgcctgtttg tacaagtcct tgctctgcaa gtttttgcac
     2821 cacttcaacc acttttcttt gggcatcttc aacatcttta acacgcaccg cacctaaaaa
     2881 gcccatttct tcaaggaagg cttcacttgc acgcgtagac atattggcta agaatttttg
     2941 ctttaattct tcgcttgcac cctttaaacc tatcattaaa tcgcgcttat ctgcaacttt
     3001 taaaatttct cttatagctt gagtgctaag tttttgtata tcatcaaaag taaacatcaa
     3061 ttctttaatc gtttcagcca aacgttcatc gctttgttcg atgtaagtaa tggtagattt
     3121 gcttgctttt tgtcctaagc gattaagtac ttctgcaact gctcttgggc ctcccacttc
     3181 aaccttataa gaagtaagac tttcgagttt gctttcaagt actgcagaca ctcttttaat
     3241 gatacttgga gaaatatcac ctagatttgc cattcttata acaacctcag ctcttaactc
     3301 atcactaaaa tactctaagg tttcagctgc atgaattgaa tccatatgag ctaaaataag
     3361 tgcaatggtt tgcgggtgtt ccttagtgat gaagtcagca agttgttgag gtttaatctg
     3421 agccaaataa gcaaagtttt ggttattctc catacttttg gtaagttttt caagaatttt
     3481 attggcaatt tctggaccaa aagtacggaa aagtatttct ttagcgtatt ccaaaccacc
     3541 gcttttaatg tattgattag attgaagcag ggtataaaat tcttccaaaa ccgcagtagc
     3601 tacagcgcgg tcaacatttt ttgccgtagc aatatagcgt gaaatttcgg taataacatc
     3661 aatttccata tgtgaaaaaa ctgaagtcgt tgcatcctcg ccaagttgta tgagaaatat
     3721 cgctaccttt tcaggcatcg ataaatcatc ataaagcatt ttttgttctt cgctaagttt
     3781 tatcatcaca tatccttttc gccgaattcg gtatcatttt ggattaagtt ttgcaaaagt
     3841 gctgcaattt cttcgctttt atcacttact aagcctctta atttttcaag taaaacttca
     3901 tattggatag aatcctcatt gaaattctcc ccaaaaccaa gctgctcttc aacctttttc
     3961 ctagctgcat taaatttctc taacgcatcc tcagcatcat ctaaaacagc atttggacct
     4021 tgctgcactt cctcttgtgc tgcaacatct tcaagcattt tttgcgtaaa tggagcaata
     4081 acttttttgt aaaaaataaa aagcaaaata gccgcaataa tatatttaac cggtgggata
     4141 aatggctcga taaaacggcc atagaaagtt ttaaccttgc tttctactct aatagactca
     4201 cgatggaaag gtaaattctg cacgactaca ctatcccctc tattagcact ataattaata
     4261 gtatttttaa ctatgctttc tacacttgca agctcttctt tacttaaagg aacatattca
     4321 ctttttacat ctccattttc atccacaaca tcttgatatt ttccatctat tgttactgct
     4381 gctgaagtac gcacaacggt tgcaaattgt ttttttgtat ttgttatagt ttttgaaagc
     4441 tcattgtttg tagtaacttg atttttctta taggtatcaa tttgtccttt attatcaagt
     4501 ccttctactg gacctatatt tgaaaccgca cctggcacac cttgaatttc aggctctttt
     4561 ctgcctgttc tttcttcatt aagagtttgc tcacttcgaa ctatagggtt tggatcataa
     4621 atttcacttt gggattcttg cttagaaaag tcaaaatcta tattgacact tacccttact
     4681 ttatctgtgc ctcctgcata aggagctagg gtttctatga ttttatcttc taaagctctt
     4741 tcttgatcgc ttttatattt aatttgagca cgaaccaaat catcttcata agcttcttgc
     4801 tcatctaaag gcacaccact ttgatcacta attcttacat tttctttggt taatttcgga
     4861 atagcagctg aaactatatt tttaatccca tcgatttgtt ttctagtaag ttttaatccc
     4921 tcgcgcacat ttacaacgac tgaagctgta ggaggaattt gtctttcggt aaaaacactg
     4981 tcttttggaa aggctatatg cactaccgca ctgcgtatag gctctagggt ttcaatcgtt
     5041 cttgcaagct ctccttctat agctctttga tactttactc tttgttcttc atttgtagct
     5101 ccaaaacttt gcgtatcaaa agcttcaaaa cccacgcgac tatcttttat caatccttcg
     5161 ctagcgataa acattctttg acgatatacc tgatcttgtg gaactaaaat tttactttcg
     5221 ctttctagta tataaggtac attattttgt tcaagtttag ctacaatagc tgcagaagaa
     5281 cttggatcaa cattatcaac taaaacagca tagccattat tagcaccact gccacttcca
     5341 cgaaatagtg ccaaaaatac caaaaatcca acaaccacaa cgatagaagc tgcgataact
     5401 atacgttgct ttcgagtcaa attttgataa agctgtccaa tttggtgaag catattttta
     5461 aaatccatta attctcatcc cttagtttag tgaatcttac ccattttatt ctaaatacca
     5521 taaaaattat ccttgatttg aaaaatcaag actattttaa aattccttca aattctgtaa
     5581 aaaatctttc attttcataa ggcgttccta tggtaattct catagcattt aaaccataac
     5641 tttttaaatt tcttactatt ataccctttt taagcaattt ttcagacaaa tctgtgctat
     5701 ttttttcctc aaaaaaataa gtgataaaat ttgtatagct ttcgataaat ttaatatgat
     5761 gctttttggc aaattcctta taaagctcca tttgagaaaa attattttcc aaagtttttt
     5821 tagcaaattc ttcatcatgt aaagccgcaa ccgctgcttt taatgctaaa ttgcttacat
     5881 taaaaggggc acgaagttta taaaatgcac tgataatttc tgcatttgct ataccataac
     5941 ctatacgcaa cccacccaat ccataaagtt tagaaaaagt tcctaaataa agcacatttt
     6001 taaattcttg cacaagatca caaggcttta gatacttatt ttgatcctta aaacttgcaa
     6061 attcattata agctgcatca attatcacta aacaattctc atcaataccg cgtataaact
     6121 caaacacctc gtttgtatct aagcactcgc ccaaaggatt gttaggcaaa cataagaata
     6181 tgatctcaat ctcatcctta tgtgcttcat aaagtgtttt aaattcagat aaatcatgag
     6241 tgatactttg agttttatag cattttgcac cgcattgctt agcataaatt tcatacatag
     6301 caaagcttac ccctgcttgc aaaaaagcat tttgagggtt aagtttagaa tgtatagcaa
     6361 attcaataac ctgatcgctg cccgcaccaa tgatgatatt ttcatttttt acattgtatt
     6421 tttgtgctaa ctcacctttt agctctacca tactatcatc tggataaaga tttgctttaa
     6481 aagcattttc ttgcaaaact ttaaccgctt taggtggagc accaaaaggg ttttcattgc
     6541 ttgctaattt tatcacttct tttacgccat attctctagc gataacttca atatccttgc
     6601 ccggctcata attgcttaaa tgatttaaaa agtcattgaa tttcattctt ttctcctgat
     6661 aaataagatc caagccaaac tacctcatct gcgtttttca aagcgcgttg aacattttca
     6721 tcatcaatat gcccttcaaa atctatataa aaactatgta aaaattcttt tgattttacg
     6781 ggacgagatt cgagtttggt aagattgata ttttcttttt taaattgctc cagtaaagaa
     6841 ctaagaccgc caggcttatg tgcagtgtga gctaaaatag aagttttgca atttggcatt
     6901 tttggatttt taatatcact taaaatcaaa aatcttgtac gatttgccgc attatcttct
     6961 atcttatcaa aaagtacagg cacattgtaa agctttgcag ctattttaga acaaattgca
     7021 gccgagtact tatcttgaga ggctaaataa gcagcatttg ctgtagattt tgaaggcaca
     7081 aattctatat tgcttaattc gtggctttct aaaaatttgc gacattgatt ataaccttgt
     7141 gggtgggaat aaatgcgttt tatctctttt aaattttcat taattcctac aaaagaatga
     7201 tgaatatcca tataaatttc accaaaaatt ttaagctcat tatacttacc taagcaatct
     7261 aaagttacac ctacagcgcc ttctgtatta ttttctatag gaacaacgcc gtattttgct
     7321 tctttattgc taagctcttt aaaaacatcc tctatggttg caagtgcgat atagcgactc
     7381 atagcaccaa aacgacttct tgctgcttga tgagtataag taccttcagg ccccaaataa
     7441 gcaacaattt gaggcatttc taaattcctt gaaacagcaa aaatttcttg ataaattgcc
     7501 tctatggcat tttgatccaa aagtcctaaa tttgcatttt ttaagcgatt gataatcgct
     7561 ctttcacgtt caggacgata aatcgctcca ccacttgttt gcttgatctc tcctatgctt
     7621 ttaacatagc tcattctttc atttaaaagt tctaaaattt tatcatctac catatcgatt
     7681 ttatttctaa aatcttctaa gtttaaattt ggcatttcaa atcctttaaa atttctaaaa
     7741 cactaggata aactccatca agcaaatccg tatcaagccc ttttgtgtcg cttatctttc
     7801 cgcttaaaac cagcaaggtt ttcatgccaa gttcttttgc cttaagcaag tcacccctaa
     7861 aatcatcact aatgatttta atatcttcaa aatcgatttt tgaattttgt cttcttatta
     7921 aatttaaagc ttctttataa aaagcaatgc taggcttacc cacaacctca tattcaaaat
     7981 caatagcatt tttaagcata gccataatgc tacctacacc aggataaggc ctaccatctt
     8041 ttttataaat actagtttcg tgcatagcta taaatctaac ttctcttcta gccaattcta
     8101 tcatagtggc aaaatcttta aatttaaaat catcataact agccacaagc acagcactag
     8161 gatttacaaa atcgagctca aaaccaagat tttcaagact ttttacaaac tcatctgcac
     8221 caaaagccgc aactttacaa ggtcttaaaa ggtgttttaa aacgctgaaa ggatcaatat
     8281 aagcattttc ttttatagcc aatccttttt gctgtaattt ttctaaaaaa tcaagttttt
     8341 ttgtattgtt agtgatgata agataaggaa gattttttgc atttaaaaaa tcgatcagtt
     8401 ctttagcacc atggattaaa gatttatcat gatcagaaat taaagtccct tgaacatcta
     8461 aaaaaaacat tttaagcctt taaaaatttc tcttctaaag cgatttgatc ttcaaaattt
     8521 tctctttgac ggatcaatct tacctgtcct tcttcaaggg ctaattcgca aactttatta
     8581 cgagtattgt aattactgct catgctaaaa ccataagctc cagtattttt aataaccatt
     8641 atatcaccac tttgagtgct aggcaaagac cttgccttgg caaaaaaatc tccactttca
     8701 caaattccac ccacaacatc gcaaggactt tcttctcctt gattataagg cagtaaaatt
     8761 tcatgataag cttcatacaa acttgggcga attaaatcat tcatagcccc atctactata
     8821 acaaaacgct ttgttttatt gtgtttttca taaagcacag agcatacaaa ttctccacta
     8881 ttggcaacca aaaatcttcc tggctccatt cctatagtta catccagtcc gtgtagttga
     8941 gcaagtattc cttgtgcata atcataaaga tcaggctcta catcttcttt ttcatacctt
     9001 actccaagtc caccgcctat atcaaagaat ttaagctcta tttgcaaggc cttaagctct
     9061 cttactaatt ttgcaacaat cgcagccgct tcatggatag gcgagatatc taataattga
     9121 gaacctatat gaaaatgcac tccaataggc tctaaatggg gtgaattttt agcataaaga
     9181 tacatttttc ttgcaaggtc aatttctacg ccgaatttat tttcatttaa acctgtagaa
     9241 atataaggat gagttttagc atttacattt ggattgacac ggatacttat ccttgccttt
     9301 aaatttaact ctttagctac actttctaaa agcatcattt cagcttcgct ttcaagattg
     9361 atatataaaa tatcgtattc taaagcaagt cttaattctt cttgagtttt tcctacgcca
     9421 ctaaaaatta tcttataaga ttttgcacct gcttttaaag cgcgtttaac ctctcctatg
     9481 cttacacaat caaacccgct gtcaagcttt acaagcattt gtaaaagact taaatttgag
     9541 tttgctttta ccgcataaaa aatttgagat tttctagctt taaaagcatt tttaagcttt
     9601 aaaaaacgct ctttaataaa atcaaaatca taaatataaa aaggggtttg aaattcatct
     9661 ttgagttttt tataatccat ttttcacctt tatttttaat tttactatat taaagcttaa
     9721 tttatcggtg cttgtaaaac ataaaaccac ctaaaaaaat taacaaaaca ataggcataa
     9781 caatgcctaa ttcacttaaa atcacaccat tttcgctcaa tcttgatagt aaaaataaca
     9841 taccccaagt aagcaaagtg actacaaaag ctacaaaagc tacaaaagct aaattaaaaa
     9901 atcttgcaat aactgggaaa aaataataca taataagcat taaaaagggt gcaaaaaacg
     9961 gcataaatac aagcttataa agactaattt taagcgattc tatgctgata ttttgtgttt
    10021 taaaaagctc caaactttca agtatatcta agatagaata atcactatca ctagctaccc
    10081 cttcgatgat cttaggctta aaaccttcaa gagtattaag ctctttaaat tcgctgatat
    10141 ttaacccctt attgccaagc tcatattctt taggaagtaa ggttaaattt ccttctttta
    10201 aaatccaatt tttcttttca aaaataccgc tcttagcttc gataaaagaa cttaaattta
    10261 aatccttaat attaaaaatt ttaatatttt gtgcggtact ttgtccatta ttaaccttag
    10321 aaatataaat aaattcgtta ttaaatttta aaaaaacttc accgctttgt tttagcatag
    10381 tgccattttt tagaatattt cttttataat catttgcata agcaaaagga gtaaaattta
    10441 accccacata cacaaaacaa aaaaataaag cccacaaaaa aggaaatatt atgaccaaat
    10501 ttttactaag ccctaaagca taaaggctta caaattcatt agcccttatc atagaaacca
    10561 aagaaagcac caaagcaaag attaaagaaa caggcaagac ataagtaaca gcagaaaaag
    10621 ccaaaaaaat cacataaagc aagctaagat ttgctgcatc gggtaaatca ttgaaattta
    10681 aaagcaaatc aataccacaa taaaaaccca gtaaagacag aaagataata aaaaaattct
    10741 taagataaat tcctgaaata aaacgaacaa atatccacat cttaagcctt taagctatac
    10801 tttgaagata tggctgataa atcatcattg cggataagct caagtaaagc ttttttagaa
    10861 tgctctaaaa ccttacttaa aattaactct tcttcggctc taaatttacc taaaacatga
    10921 gaaataacat tctcaccctt gcccactcct atacgcactc tttcataatc acttccacat
    10981 agattatcta tgcttttaag tccattatgt cctccgctag aaccgcctct tttaaaacgc
    11041 aaagcgccta aattgatatc gatatcatca tgaacgacta tgattctttc acatttgtaa
    11101 aaatcattta ccgcttttac gcttaatcca gaattattca tataagtatg aggtttaaga
    11161 agtaaagaag agcccatttt gaaaagctct cctttgaatt ttgagtttgt gagatttgtg
    11221 aaattgcctt cttttaaaag caagtcaata agcataaagc cgacattatg gcgagtatct
    11281 tcatactctt tgcctatatt gccaagccct acgactaaga tcatctagct ttttctacgc
    11341 ccactaccgc tactctatca gcatctatca tagttactcc cgcaggaact acaatatcac
    11401 gaacaagtaa agcatcaccc acatcaagct tacttacatc aagctcgaag aaattaggta
    11461 aattttctgc tgcgcatttt actttcaatc ttctttttga ttggattaaa acacctttat
    11521 ttttaagacc tatagctgtt cctgtgattt taactggaac catgtattta gaaatcacac
    11581 ctttttgtgc aacttttaaa tccacatgtt taagttctgc agtcacagga tctttttgat
    11641 aatctacaac tacaacgctt aaagtttgag aacctacttt tacatcaaaa attaaagtag
    11701 tttttttacg aacttcctta ataaactcat ttactttaaa agcggcattg atgttttcta
    11761 atccttttcc atagatgttt gcgattagat aaccatctct ttttaaagct ttagcagctt
    11821 ttctaccgat actctctcta acgatgcctt ctaacatctt ttgtcctttc ttaaaaaatg
    11881 agctttgatt atatctaatt ttggcttatg gaaaagtaaa tttatagctt ctttaacttc
    11941 tttaagatat aatttgtttt acaaatatgt atgttaattt aaggcttcat gtgaatgaaa
    12001 aattcaatat taatatagct tggtttttaa taatcttagg tggaattata gaatgctttt
    12061 gggtaagtgg acttaaatat tctacagaaa tttggcacta tattttaaca gccattgggg
    12121 tttgtatttc ttttacttgc tttttaaaag cttgtgaaag acttgaagta agtattactt
    12181 atagtgtttt tgtaggcatt ggcactattg gggtggtttt aaatgaaatg tttattttta
    12241 acgaagctgt ttctataatt aaacttgtgc ttatagcaat tttactttta agtattatag
    12301 cccttaaatg ggtaagcaag gaagcttaag ctatggaatg gttttatttg tttttagcta
    12361 ctgcctgtga aatttttggc gtggtgatca tgaaagaact tgtaagcact aaaaataagc
    12421 tttacctttt agttttgata gtgtgttttg gattttcttt tactttttta agcttaagta
    12481 tgcaaaatat cgctatgagc gttgcttatg ctatatggac aggagctgga accgctggtg
    12541 gggtaatgat aggagtgctt ttttataaag aaagtaaatg ttttttgaaa ctttttttaa
    12601 tcgctgtgat tattacctgt acagcgggtt taaaatttct ttcttgagga ttttttgtgc
    12661 aaatttatgt aagtggaata catactgatg taggaaaaac acattttagc gcagcttttt
    12721 gtgcgaattt taactatgat tattttaaac tcattcaagc aggaactcca acagatagtg
    12781 agtttattgc aaaatttagc ccaaaaacaa agatttttaa agaaggtatt tttttgcaaa
    12841 ctccagcttc tcctcatctt ggaaaaatca aagaaaagct tgattataaa gccttagata
    12901 tcattttacc aaaaagcaaa aacctactta ttgagcttgc gggtgggctt ttttctccta
    12961 tggatgaaaa ttacactatg attgattttg tgaatatttt caaacaccct acgattttgg
    13021 tagcaaaata ctatcttgga agtattaatc atatcttgct tagcattgaa gctttaaagc
    13081 aaagaaatat caatatttta gcccttgtaa tgatgggtaa aaaagatatc ttacaagatg
    13141 attttataaa aaattatgca aaaattccta taatcaatct tgattttttt gatgaaaata
    13201 gcattttaaa taaagatttt aaagagcaaa tgcaagaaat tttacaactt aaaattcctt
    13261 aaaaatctgc tctaaactct ctagtacata aacgatttgt tcttttgtga tgatgtaagg
    13321 aggcataaaa taaatcgtat ttgctaaagg tcttaaaagc aaaccttttt ctaaggcctt
    13381 cctaaataca aaaagtccta cgcgtttata cttggtgctt aaaatatcaa aagcactgat
    13441 catcccgcaa gttctaaaat tacccaaaaa gtcaaatttt tcaagtcttg aaaattcttt
    13501 tttgataaac tcgcttaaaa tttgattttt tactaaaata ttttcatcct caaagatatc
    13561 taaaaccgca tttgctgccg cgcaagctaa ggtatttccc gtatagctat gagaatgtaa
    13621 aaaagccttt tggctttcat aagtatcata aaaagcatta taaatttcat ctcttgtaag
    13681 cactacagaa agtggcataa atccacccgt tatccctttt gaaaggcaga taaaatcggg
    13741 gctttgtttg cattgatgta aggcaaacaa agttcctgtg cgtccaaagc ccactgcaat
    13801 ttcatcaaaa atcacttgca ctccaaattt atggcaaagc tttatggcct catcaataaa
    13861 ccctgcttga tacatatgca tatttcctgc acattgcacc aagggttcaa gtataaaagc
    13921 acaaatttca cttgcatttt tttctaaaat atcttttaaa atttcaagct ctttagtgta
    13981 gtctttgcct tgtggcacag gcgtgcttaa acactctaaa agtaaaggct tataagtatc
    14041 tttataaagc gcaacatcgc ccacacttaa agcccctaag gtttcaccat gataagaatt
    14101 gcttaaagat aaaaatttac tttttttcac ccccttattt aaatgataat gaaaactcat
    14161 cttaagtgcg acttcaatag cgcttgagcc attatctgca taaaaacatt tgttaaaatt
    14221 cctgcctact ttttcgcaaa gtcttgcaga aagcttgatg atgggctcat gtgtaaagcc
    14281 tgctaagatc acatgctcta gctcatcaac ttgtttttta atggcatttg tgattttttc
    14341 attacaatga ccaaaaagat tgacccacca agaactcaca caatccatat aagctttatc
    14401 atcaaaatca taaagccata caccttttgc tttttttata ggaattaaag gtagggtttc
    14461 gtgatctttc atttgtgtgc aagggtgcca aatgtgtttt aaatcgagat tttttaagat
    14521 ttgattttgc attataactt cttttttaaa aatattttgg caaaataata ctttaaattt
    14581 ttaaatttac aggaaaaaaa tgagccttaa aaatatctta gaaacccttg aaaaaaacca
    14641 taatcttaga aaacttacaa gcctcaaaca cgaaggaaat tttgttttta aagagggcaa
    14701 aaagctttta aatttagcgg ggaatgatta tttaaattta agctcttgca aatctttaaa
    14761 agatgaattt ttagacaata tcaaagaaca agacttattt ttttcaagct caagttcaag
    14821 gagcttgagt ggaaatttta caatttatga agaattagaa agctttttaa aatccaaatt
    14881 taaagaaaaa gaaatcttac attttaacag cggttatcat cttaatatct cttgtatagc
    14941 tgcacttgca agcattccaa acacactttt tttagcagat aaattcatcc atgcaagtat
    15001 gattgatgga ctaaaacttg gcggagtaaa attttttcgc ttttatcata acgatatgaa
    15061 tcatttagaa aatttaattc aaaaacatta tgatcattat gaaaatatca tcattttaag
    15121 cgaagcgtta tttagcatgg atggtgattt ttctgatttt aatacactca ttgcctttaa
    15181 agaaaaatac cctaaaatca aactttatat cgatgaagca cacagcgtgg gttgctttga
    15241 tgaggagggc ttgggacttg ttaaagcttt aaatttggaa gaaaaggttg attttatagt
    15301 ttttaccttt ggcaaggctc ttgcttctat gggtgcttgt atgatttgta ataatcttta
    15361 taaaagcttt tttatcaaca aggctagagc ttttatttat tctacagcat tgcctcctat
    15421 caatatagct tggacaaaat ttatttttga aaaaatgagc gaactaaaag aaaaaagaga
    15481 gaaactacaa atcataggca atttttttaa aaatcaactc atagaaaaaa gtcatcaaat
    15541 tttaggcgat gcttacatca tctccttggt tttaggagaa aatcaaaagg ctatagaatt
    15601 agcaaaaaaa cttgaagtaa atggcatttt tgcacccgct ataaaagaac ctactgtgcc
    15661 taaaaataca gctagaattc gtttttcttt gcatgcagga cttagcaaag aagacttaaa
    15721 gaaagtggta gaacttttat gaaaataagc aatttaattc aaaatgaaaa ctcacaagaa
    15781 cttatcttgg tatttggtgg ttttgcttca catcctagtc attttgcaca tttaaaaagc
    15841 gataaaaatg tagttttggt ttatgattat gaaaatttag actttaaatt tgatttaaac
    15901 tctttttcta aaatcactct catagctttt tctatgggag tttgcgtggc aagtagagtt
    15961 ttaaaaaata tagagttttc gcaaaaaata gctatcaatg gtactccttt tggtatagat
    16021 aaattaaaag gaattcatcc tgcaattttt gctaagcaaa ttaaaaaatt tgatcttaca
    16081 gcttttaaaa aatctttatt taaagagcgc gaaaatgaag caaaagattt tatctttaaa
    16141 gatgaaaaag atttaaaaac cgagcttgaa aaacttttcg aatttgcctt aaaagagcgt
    16201 aatgaaagct ttatttggga taaaatttac tcaagcaatc atgatgaaat ttttcctcaa
    16261 aatgctttaa aaaatacttt ttcaaagctt atttttttag atgagccgca ttttgctttt
    16321 tttcatttta aaacttggga tgaaatttga attttttaaa agcaaaagat tatcaaaaac
    16381 acgcaaaagt gcaagattta atgggcttaa aactttgtga aattttaaaa aatttagaaa
    16441 tttcgcattt taaaaaagtg tttgaatttg gttgtggcag aggcgaattt agcgacaaac
    16501 tttcaaaaat tatcactttt gatgaatatt taaaaaatga tattttggat tatcctgata
    16561 atcttaatgt agaaattttt gatatgaata ccctagctac acagaattta agcaagcaaa
    16621 aatttgatct tatcacttct aatgcaagtt tgcaatggct tgatttaaag caggttttgc
    16681 ccacgctagc aaatatgcta aataaaaaag gaattttact tctttctact tttggagaaa
    16741 tgaatttaaa agagatcaaa caaagcacaa gcttgggttt aaaatatttt agcacaaaag
    16801 aacttgaaca aattttcaaa ccctattttt ccgatattaa aatcacagaa gaaattgtaa
    16861 atttggaatt tcaaaacgct ttagaagttt ttagacattt aaaattaagc ggagtaaatt
    16921 ctttgggatt ttatcgctta aacaagcaat tcttaaaaga atttgaagaa aaatttcaaa
    16981 ataaactcac ttatcatcct atttttattt tatgcaaaaa agatacaaaa taaaatttct
    17041 tatgttataa tacaaaaaat caagattatc gacaaaggaa agtgcaatga aaaagctcgt
    17101 gttatgtttt atagtgttgt ttttatcttt aaatttaaat gcacaaaatt taagtgtttt
    17161 cgtagcttct tcggcttcaa aagctatgga agaggtcaaa aatgaatttt taaaatcaca
    17221 ccctaatgac aatatagatc ttgtttttgg tgcttcagga aagtattatc aacttttgaa
    17281 acaagggcgg gaatttgatc tatttttttc agccgataca aaatacgcgc aagcaattta
    17341 tgaggatcaa aacgctttag ataaaccaaa agtttatgtt ttaggtatct tagccctata
    17401 tagcttagat gaaagcttac ttgaaggtgg gatagaaaag ctaaaagata aagcaaataa
    17461 aattcatcac ctaagccttg caaatccaaa ggttgctcct tatggagtag ctgctaaaga
    17521 agtgcttgaa aatttaaatt tagacaaact ctttgaagat aaaattgttt taggtgaaaa
    17581 tatctccgtg cctgttttac atgtcgatag caataatgcg gatttgggta ttgtggctta
    17641 ttctctagta tcttctatca atcatcctaa aggcaaagct attttaattg atcaaaaata
    17701 cttcactcct ttaaaacaaa gctatgtcat cacaaaatac gctaaagata aaaaattagc
    17761 ctttgaattt agcgatttta tcagttcgca aaaagcaaaa gaaatcttta aaaaatacgg
    17821 atttgacaca ccttgaatat cttaaatggt aagattatag agcttttaaa tgagggtgag
    17881 attgtcatcg ttaagatcag tattaaagag caaattttta aagttttaat gcttgatctt
    17941 cattctttgc aagatcttaa aataggtaca aaaattcaag tacttttcaa agaacacgaa
    18001 cttggcttta ctttacccca ttctatttta agtgtggaaa attcatttct agcaaggatt
    18061 aaaagtatca aaaaaggcaa aattctatat catatctttt ttgattttga gggtgatgaa
    18121 atttctagca ttatcaccaa agaaaaagcc ttagagctca aacttgaaga aggacaagaa
    18181 tggctttgct ttgtcaagga aaatgatatc attttaaagg ctgtttatgg ataatgattt
    18241 tttacaaacc ctttatctta cctttaaact tgcatttatc accaccttta tgctcttttt
    18301 catcggagta tttttagcct atcttttaag ctttgtgaaa tttcctttta aaagcttggt
    18361 gcaaaccttt gtagctttgc ccttggtttt gcctccaagt gttttgggtt tttatttgct
    18421 cataagcttt tcacaaaaca gctttttagg acaattttta aaagaatatt ttaacctttc
    18481 tttggttttt agctttgaag gtttggtatt tgcttctttg attttttccc taccctttat
    18541 ggtaaatcct ttacaaagcg ctttttcatc gatcaatcaa aacctacttg atgcttctta
    18601 tactctagga aagggtaaaa tttacacact ttttagagta attttgccca attctaaagt
    18661 agggattttt agcgcttgtg cgatgagttt tgcacacact atcggtgaat ttggagtggt
    18721 gatgatgata ggtggacata aaaaaggtga aactttggtc gcaagtattg ctatttatga
    18781 tgagcttgaa gttttaaact atactttagc acatcaatac gcttttactt tatttgcgat
    18841 ttcttttacc atactcttaa gtctttattt tgtaaataaa aaaatcgctc tataggccac
    18901 ttttatgata aaaatcgata taaaacttcc catcaacaca gcaaaaggca agaagcaact
    18961 agaattaaac acttgcttaa aagcaaatga aatcactgct atttttgggg aaagcggtgc
    19021 gggaaaaaca actctactta aaatcattgc aggacttata aaacctgaat ttggacgcat
    19081 agaagtagga gatgagcttt ggtttgatac ccaaaaaaat gtcaatttag ccatacaaaa
    19141 aagaaaaatc ggctttgttt ttcaagatta cgctcttttt ccaaatatga gcgtaaaaga
    19201 aaacatttct tatgctgcga cttcaaaaca aaaagcagaa gagcttttaa gcttaatgaa
    19261 tttggaaaat ttagccaaaa tttatcccaa aaatttaagt ggcggacaag cacaaagagt
    19321 ggctttagca agggctttag caagagagcc acaaatttta cttttagatg agcctttgag
    19381 tgcattggac tttaaaatgc gatctttttt acaagatgag cttgtgaaaa ttttacaaca
    19441 ttttaaaatc acgactttat tagtaagtca cgatttggct gaaatttaca aattgagcca
    19501 tagaatttta gagcttagtg atggaaaaat catcaaagat gcaagaacaa atgaattttt
    19561 tacctcatca aatttaagtg cgaaattgcg cttgagcgcg actttgcttg agatgaaaaa
    19621 aagtgatatt ttagttattt ttactttgct tttaaatcaa gatatcgtta aaatcacact
    19681 tagcgaagag gaatttttaa aatcttataa agatgtaaaa atcggcgata cgcttttgct
    19741 atccataaaa gcctttaacc ctatcatcgt aggaaaactt gataaatagt gaataaattg
    19801 aaaagttact aaaaccttaa aaacttaaca atttatttta tattgctatt ttttctttat
    19861 gggtatttat attaataaaa caatcactct aataaatctt taagtggaat ttctaggctt
    19921 ttagaaattt tatataagtg ctccaaatta aaatgcttac cgtatctatt acactcacaa
    19981 tttgaataaa acgcaacgga ttttatacct atatctagag ctaactcgag ctgagaaatc
    20041 cctttttgtt ctctaaattt ccttatattt gacgatactt ttttataaaa attcaaaatc
    20101 tctttttcac tagaattact aaagtcatct ttcatttttt atcctatagg attaatatga
    20161 aattaaactt tacaaagata taatttttta aaaaatatcc tataggataa attaaaggag
    20221 aaaaaatgaa attttataat gtcattacga tggtaatttt tattttattt tttgctggat
    20281 gctctgttag tggtatgata actgcggatc ataatggaaa aatgtattgg gtgccggcag
    20341 attgtcctag atataaatat ttttataatg aacctgataa attgatatgt acagatagca
    20401 atggaataga aactggaaga attctttacc ctgcagatga acaacaaata gctaattata
    20461 gatacgaaca gcaaaggcaa gatgagatat ctcaaagaaa catggaacaa cttcgccaaa
    20521 acacagaaaa tcttaaagaa ataaataggc atttttatga aaattttatg cccaaaagac
    20581 acgatgtata tattcattac tgatattata tttaagcata aattagttaa ttgtatttat
    20641 ttcttaaata ctcttgtgaa tatattttct aagggtattt aattttataa tatctccata
    20701 atgcttatat caaatcataa aagatcaaat ttgagtaaaa tttcataatt tacagcacta
    20761 aaaatcctac gaaaattcct actaagcatt atctagtatt acactaaagt acttaaattt
    20821 aaaaaaacca aaattgtaac cattaaagca atccatcgat taaatataac ttactttatc
    20881 attcatttac tatttatgaa aaattatatg ctagtttttt gcttattatt ttatagctaa
    20941 aaattgaggt atgcaaaatg agaaaaagta tgattagttt tttggaaaaa aaggccaaaa
    21001 atgaaaaaat aaccatggta agtgcgtatg attatcatag tgcaagaatt ttagacaata
    21061 gcgatataga tattatattg gttggagatt cattagccat gacggtactt ggtatgcaag
    21121 atactttaag tgttactatg gatgaaatgt tgatttttac caaagctgtt tctcgcggag
    21181 ctaaaaagtc tttcgtactt gctgatatgc cttttatgtc ttatcaaagt tcagatcgtg
    21241 acgctatctt aaatgcctca agatttatca aagaaagcca cgcaaatggg gtaaaagtgg
    21301 aagggggtat agaaatcgca agcaagatta aattgatttc ccaatcagga atacccgtcg
    21361 ttgctcacct aggtttaacc ccacaagctg taaatatgct aggtggctat agggttcaag
    21421 gtaaagattt acaatcggcc caaaaaatta tagatgatgc aaaagctgtg caagatgcgg
    21481 gtgcttgtat gttggtttta gaatgtgtgc ctgtaaaact agcacaaaaa ataagctcta
    21541 ttttagaaat tccaacaatc ggcataggtt caggcaaata ctgcgatgga caagttttag
    21601 tttatcacga tcttttgggt ttaaataaag attttaaagc aaaatttgta aagcattttg
    21661 ataaaattga ccctcaagta ggagttgaaa aatatagaga tgaagttaaa agcggtattt
    21721 ttccttccca agagcacagc tttgattatt tagatgatga attattagat aaattatact
    21781 aaggatacaa atatgcaagt cattacttct gtcaaagaag caaaacaaat tgtaaaagat
    21841 tggaaatcac atcaacttag tataggctat gttccaacca tgggtttttt acacgatgga
    21901 catttaagtt tagtcaaaca tgccaaaaca caagataagg ttatagtaag tatctttgta
    21961 aatcctatgc aatttgggcc taatgaagat ttttctagtt atccaagaga tttagaacgc
    22021 gacattaaaa tgtgtcaaga taatggcgtt gatatggttt ttatccccga tgcaactcaa
    22081 atgtatctta agaattttag tacctatgta gatatgaata cgatcactga taaactttgc
    22141 ggggctaaaa gaccggggca ttttagaggt gtttgcacgg ttttaactaa attttttaat
    22201 atcctaaacc ctgatatagt ctatatgggg caaaaagacg cgcaacaatg cgtagtcgtt
    22261 aggcatatgg ttgatgattt aaattttgat ttaaaaattc aaatttgtcc tatcattaga
    22321 gaagaagatg gcttagctaa aagctctaga aatgtatatc ttagcaaaga agaaagaaaa
    22381 gcgtcactag ctatatctca aagcattttt ttggctgaaa aattagtccg agagggagaa
    22441 aaaaatactt ctaagatcat ccaagctatg aaagatattt tagaaaaaga aaaactaatc
    22501 aaaatcgatt atatagaatt agtcgatttt aacaccatgg aaaatatcga aaatatcact
    22561 gataatgttt taggagcggt ggctgctttt gttggaaaaa caagactcat tgataatttt
    22621 ttagtacaag gattaaaatg aatatcactt tactcaaatc aaaaatacat cgcgcaagcg
    22681 taacagaagc taggcttgat tatgtaggaa gtataagtat agatgaaaaa ttattgcaag
    22741 cgagtggaat tttagaatac gaaaaagtcc aagtagtcaa tgtcaataat ggcgctagat
    22801 ttgaaaccta taccatagcc acgcaagaag aaggagttgt atgcttaaat ggtgctgcgg
    22861 ctcgtcttgc agaagtggga gataaggtga tcatcatgtc ttatgctgat tttaatgaag
    22921 aagaagtaaa aacatttaaa ccaaaagttg tttttgtgga tgaaaataac actgctacaa
    22981 aaataacaaa ttatgaaaaa cacggagcta ttttctaaca tctagctatt tttgtaattt
    23041 tttctatctt agataaattc atttatctaa gataagtaaa aaatgatttt tatatctttt
    23101 aatccattat ttttgcttat cttaacttct agtttttata aaccacatct tttttcatta
    23161 aaaatttttt taaattttat ccctctttga taaccttgtt ttcccttata agttcaaaac
    23221 cattttttaa gaaaaaatct ttagcactta aggatgcgaa agtgtaaatt tcattatgca
    23281 aataagtttt taaaataaaa tcaagtaaat tttgtgctaa accttgtcta acaaaatcag
    23341 gatgagtaaa aagcaaatca agcaatttct gctcttgttt aacacttata aaacttgcga
    23401 tttttcctct tttttcatag acaaagatct catcatattt aaatttttct tcccattgtt
    23461 gtctatcaat tttaatccaa gcacaaattt gatcttttgt ataatcctta gcacaaagtg
    23521 tttttacgct ttgctcaaaa agcgacaaac aagcatttaa atctttaata tcagtttttc
    23581 ttagcaagaa cttttcttaa tgccaagctg gctagggcta aaccaaaaga tgcagtcaca
    23641 cccataaaag atccaagatc tttacaatgc gcttcctcat ctgaaaatac cacatcaaaa
    23701 tttcctttaa agcctgattt tctaagttca taacggaatt ttttcgctaa agcatctccg
    23761 tgggttttaa atatacttgt agtttttata cgcgtaggat caagctttct agccccaccc
    23821 gtagaagaga taaaaatttg acgcttaaaa tcgatcaaat ttgcaagcgc tacttttgca
    23881 ggaatatcat caattgcatc gatgattaaa tcaaattcac ttaaatcaaa attcgctaaa
    23941 aattcattat ctattttact tactataccc ttagcattgt aaattctagc aaaaacctta
    24001 gctttttctt cgcccaaatt ttcactatga atttggcggt tttgattggt gatttcaaat
    24061 ttatccgcat cgattaaagt aagattttga aaaccgctac gataaagtgc gtctacacac
    24121 atcccaccta ctccaccaag tccgcatacg agcaccttgg tttgtgaaat tttattgaag
    24181 ttttcctcgc ttactagcca ttttatacgc gtaaatctat cattcattat ttgcctttaa
    24241 ccatttttta acttttttca ttttgtcata agcacttaaa tcaagcatta taggagttat
    24301 agtcacataa ccctttttca ataaagctat atcgctatct ttctcatctt caaaatccaa
    24361 atttgctgct gctagccaat aatactccac tccgcgtgga ttgatatttg aatgcgcttc
    24421 aaaattatac actcgcttac ctgctttaca aattttaatg ccttttatat tggattttgc
    24481 cggaaaatta atgtttaaaa attctttttt tcctaaagga aagcctttat caaaaatatt
    24541 ttgaacgatt tttttagtaa tttttaaagc atttttaaaa tcaagctctt tttcactttt
    24601 tttgtaaaat tgcgaaagag ctatggctgg aattccttgt aaaactgctt ccatagcacc
    24661 cgcacaagta cctgaatatg tgatatcttc acccacattt gcacctttat taatcccact
    24721 tatcacaaga tcaggcaaac gcgttttata aagcgcatga agagcaagat aaacacaatc
    24781 tgcaggggtt ccatcatcaa gcttgtaaaa tctttttcct actttgataa aacgcaaggg
    24841 ttttgtaagg gttatagaat gtgaacaagc tgatttttca gtagcaggcg caactatggt
    24901 aatttttgct ttaaattctt tttttaacat tttaatgagt tttttaagtc cctcactttc
    24961 aaaaccatca tcattggtaa taagaatttc tttcattgct cttccttgca aaagataaaa
    25021 tttggattgt agcatatttt tgtaatata
//
LOCUS       DBBXOW010000016        25019 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.016, whole genome shotgun sequence.
ACCESSION   DBBXOW010000016 DBBXOW010000000
VERSION     DBBXOW010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25019
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.016"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            30..3533
                     /locus_tag="ACJE1S_000672"
     CDS             30..3533
                     /locus_tag="ACJE1S_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HGG0806239.1"
                     /translation="MIQKSLALAEELQGKIEANISNSEKEFHAKMQKLLNNPENKVML
                     IELLDRSFRCKDKRASFELIEHTLNKYGIADFFSAFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHMRKRKDQDNITLNVNLIGEEVLGEAESKYRIQKY
                     EEALKSSYITYISIKITTIFSQINIIDFEYSKDEVVKRLDHLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVSKFDIKAGIVLQAYIPDSYEYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFVLEGDNYKYIN
                     VGIASHNIFEIAYAYTRISEAGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDNNWNVQKELFLKSLEGIKTLDNST
                     HRTQDRNKAPNIVSAYESGMFNNESDTDFILPQNRAWAKVIRAKYENLENYDVMPVIG
                     DLEFDKNTLNILEVKDKIKDRMIGKAYLAGENEIKKALKVAKNSNFKNTSFDEIHAIL
                     AKAANLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFTEFYPHSLKVLREQNKNTQ
                     FSPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDAGI
                     SKDALIFLPSKGSDISKYLLVDEAVKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYEDEEFKKTLVDAAASMA
                     VGNPFEFKNKLGTLADKPSAKVEKALNELAPYEEWALKPQFLENNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIEIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGVKKSAIGFGRKVGIYNYITQFLDISTSEADENLLNNE
                     FVKTLEKIDLGTNEENKKALNNAILMAKSYAYHYRNEFSVSKDYVNIRGEDNLFSYTK
                     IKNLAFRVCENDNLQDILGVIIAANILNIPLSVSYEENDKISLVKELCKAINLNLEIT
                     NESKAQFVSRLKNFERIRYHGKVSVEDEIYQEAAKEAKIIIREKPLLNGRFELLFYHN
                     EKALSVSFHRYGNLGIRALNH"
     gene            3548..5029
                     /gene="putP"
                     /locus_tag="ACJE1S_000673"
     CDS             3548..5029
                     /gene="putP"
                     /locus_tag="ACJE1S_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HGG0806240.1"
                     /translation="METVQINTPIAIMFVAYAALMLYIGFYFYRQNKNTEDYFLGGRS
                     LGPVVSALSAGASDMSGWLLMGLPGALYASGLIESYIAIGLSIGALLNWSFVAKRLRI
                     YTSVIANSITIPDYFETRFDDDKHILRIVCAIVILIFFTFYVSSGLVGGAKLFEATFG
                     IRYEYALTTGTLIIVAYTFLGGYKAVCWTDLLQGLLMMGALIVVPAVMLYHLGGFGEA
                     MAVIEEIKPNALSMGEGIGALSIVSALAWGLGYFGQPHILVRFMSIRSTKDIPAATFV
                     GISWMVISLIGACFIGLLGIAYVHKFELTLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKRIFNKEASNKTVMNLGRIGVLLVALVAFVISTDK
                     ESSVLSIVAYAWAGFGASFGSVMLFSLFWSRMTRIGAILGMITGAVMVVLWKNYLAEL
                     FNFPIYEIVPGFVAASAVIIIASLLTQVRPGTKAAYERMLKEL"
     gene            complement(5171..5398)
                     /gene="yedF"
                     /locus_tag="ACJE1S_000674"
     CDS             complement(5171..5398)
                     /gene="yedF"
                     /locus_tag="ACJE1S_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HGG0806241.1"
                     /translation="MKITYTLNLEGEACPYPAIATLDALPQLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKILEIDQNGPTLRFLIQKP"
     gene            complement(5402..6613)
                     /gene="yedE"
                     /locus_tag="ACJE1S_000675"
     CDS             complement(5402..6613)
                     /gene="yedE"
                     /locus_tag="ACJE1S_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004295570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HGG0806242.1"
                     /translation="MNSFKQKYLINFWDNSRAMITLGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMDLNGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWFFGVFMVLGIYLG
                     VKLCNTSFFKPKAKLQCANKENIPLLKQNSRAKFHFVLGSILFVAFLIWVFYLVLVNG
                     NISTQSKQSLLALALIFGFAFGFIISRGQICFTACFRDLFLFGRENAIKGALIGMIIA
                     SLIAFAFILHGHNSKLIELSPAVAIGAFLFGFGIVFAGGCECGWTYRACEGQSHFMIV
                     GIANIIGTMILALTYDFLPSAFKEGVKINLLNEFGNLGGFFINLALFILMFACVLFYK
                     KHFFQKLNQKG"
     gene            6771..6865
                     /locus_tag="ACJE1S_000676"
     tRNA            6771..6865
                     /locus_tag="ACJE1S_000676"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6805..6807,aa:Sec,seq:tca)
     gene            6887..8137
                     /locus_tag="ACJE1S_000677"
     CDS             6887..8137
                     /locus_tag="ACJE1S_000677"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HGG0806243.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDYVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHSRCINVIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKDAIGTTGKGIGPSYADKINRTGHRVGELLDPQRLHNALMK
                     DFEANKNYLEFLGIEIPDSDELLSDLKRFNEILTPFITDTTRMLWKALDEDKKVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYTTRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEIDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            8134..8562
                     /locus_tag="ACJE1S_000678"
     CDS             8134..8562
                     /locus_tag="ACJE1S_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="HGG0806244.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIAELRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            8555..9073
                     /locus_tag="ACJE1S_000679"
     CDS             8555..9073
                     /locus_tag="ACJE1S_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HGG0806245.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDTAIADVLTQMDAEDASKIMLSLESRKISGVLSKMDPAKASELT
                     LLLKNMDNNKSN"
     gene            9147..9698
                     /locus_tag="ACJE1S_000680"
     CDS             9147..9698
                     /locus_tag="ACJE1S_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HGG0806246.1"
                     /translation="MRIKLPHIPYITNKIMLDIAHSSFVEIKDNIEKLNPCIKQILED
                     DLMNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFGVILNSEDRHNHL
                     AHRILEELIENDYINFVVSENRVKNLIFSSIDDYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYELIFEKLYQEELRKKGMF"
     gene            9702..10820
                     /gene="carA"
                     /locus_tag="ACJE1S_000681"
     CDS             9702..10820
                     /gene="carA"
                     /locus_tag="ACJE1S_000681"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HGG0806247.1"
                     /translation="MKAYIYIENDIFLTAKAFGKGGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSPTFSNFRAQKSLQEYLEE
                     HGKIGVYGLDTRYLVKMLRDSGNLRAVISTEISSKEELKAALEKSAKIDEINFVKEVS
                     TKKSYAHKHGVWNNATQSYNKAKKNTKKVAVIDYGVKANILNELVEVGLEVEVFPYNT
                     KAEELIKLYQKGQIQGVFLSNGPGEPKILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLENKSVEITAQNHNYNVPEELCEVAIITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            10817..11488
                     /locus_tag="ACJE1S_000682"
     CDS             10817..11488
                     /locus_tag="ACJE1S_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG0806248.1"
                     /translation="MNFLPLNFDFLAIFSVAFLSSFGHCYSMCGGFILAFMNLNSTHK
                     NLFLLTFIYQLFRIFSYILLGIIFGIFGNLLAINAKIQSLSFFILGVFMVILGFSLIF
                     RGKILAFIENRTFFEYFIKKIIKKSMGFKGVKSAMILGFANGFVPCGLVYFFLANAMS
                     RQNVTESILVMLVFGLSTLPAMLFFVKISQYLGVFLKKVFNYLSYFIIVAYGIGLAYM
                     GFKAF"
     gene            11489..12703
                     /gene="bumS"
                     /locus_tag="ACJE1S_000683"
     CDS             11489..12703
                     /gene="bumS"
                     /locus_tag="ACJE1S_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate sensor histidiine kinase-like
                     phosphatase BumS"
                     /protein_id="HGG0806249.1"
                     /translation="MANSVAEQVLKVIEKKTIFFKINLQGIIIDASEKFCKISGYSKK
                     ELIGKHHFILKHPDVKESYINQLLGKLWQKEAYWVVFKNVDKLGKTFYLDAFLIPIVD
                     NKGDLNEIIALSYDISNSFKLNEELVLNHAKLREISVNLEKTAKERKEEFAKLSKDFE
                     YKLKVALEKNEKDTKKIYKEILNSSIEQMISDIAHQWRQPLNELGIAMFQMKQNVQDE
                     KGFTEIYLQSKSTIKNMSETIDIFRTLFKNNENEKNHVSLREILNKVIGIAFETIEKH
                     QVNTRIISKTDYRVIAHENGLMRVFLNLIINSIEAFKTQKVKNIIFSFSKFGKNYIKV
                     KVKDNAGGVDEDILDKIFQPYITTKHPSQGIGAGLYISKQIVESFGGKIQVKNIKDGA
                     CFEIYLKLQEGN"
     gene            12707..13375
                     /gene="bumR"
                     /locus_tag="ACJE1S_000684"
     CDS             12707..13375
                     /gene="bumR"
                     /locus_tag="ACJE1S_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate response regulator transcription factor
                     BumR"
                     /protein_id="HGG0806250.1"
                     /translation="MKELVILVVEDEVKIRESLVNVLSSRYSKVIGAQNGDEGLKKFK
                     KFKPDLIITDIAMPIMDGLDMAKEIKEIANDVPIVVLSAYSEKERLLRSIDIGIDKYL
                     IKPVDVDELFKVLDYLVGEKIETNALVDISKEYQFNKTKRILIHKGQEIVLTKKELAF
                     ISLLLKQPGVLVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEKFIKNVPGLGYKI
                     NIEN"
     gene            13504..14970
                     /gene="ccoN"
                     /locus_tag="ACJE1S_000685"
     CDS             13504..14970
                     /gene="ccoN"
                     /locus_tag="ACJE1S_000685"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HGG0806251.1"
                     /translation="MHPGNALNYDYTVAKYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESKFLMAIGKL
                     HFWLYMITMIVAVISLFAGVSTSKEYAELEWPLDILVVLIWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMAVPTYFVAEMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRIFRRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIIPYYWIRAI
                     GGLLYLIGFFMFTYNIYKSIACGKVLDKEPKSASPMAA"
     gene            14983..15648
                     /gene="ccoO"
                     /locus_tag="ACJE1S_000686"
     CDS             14983..15648
                     /gene="ccoO"
                     /locus_tag="ACJE1S_000686"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HGG0806252.1"
                     /translation="MFSWLEKNPFFFAVAVFIVIAYAGIIEVLPNFAENARPIEGKKP
                     YTVLQLAGRQIYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLMRVGNYRTTDWHENHMWDPVSVVPNSIMPAYKHMFKNNADMETAYAEALTVKKVF
                     NVPYDTENGTKLGTWEEAQAEIKAEAQAIVDQMKNQEVKDAFARGEIKEIVALIAYLN
                     SLK"
     gene            15653..15916
                     /locus_tag="ACJE1S_000687"
     CDS             15653..15916
                     /locus_tag="ACJE1S_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HGG0806253.1"
                     /translation="MEHLVIIWNVIKNLVTLNLSAVQKHEWEIFQGYGFFLFVMFLSI
                     VLYSYWYHLYRAEKKGERNYEKYANLALSDDIDDSVLESKRSA"
     gene            15916..16779
                     /locus_tag="ACJE1S_000688"
     CDS             15916..16779
                     /locus_tag="ACJE1S_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG0806254.1"
                     /translation="MQWLNLQDNVNLLSFIGAILIILITLVVVGRMFKYMKEKKGEAE
                     LSEHSWDGIGEYKNAIPIGWAVIFFLTIVWAVWYFLWGYPLNSYSSIGEYNEEVKAYN
                     TKFEEKFQNLSTEDKVAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGLIDAI
                     KHGAKGMNFPGGEMPAAADLGIAEEDIPAIAAYVAKELSAIKKTSNENLVAKGKEAYA
                     TCAACHGEDGKGQDGIFPDLTKYGSAAFVVDVLHSGKTGFIGAMPAFSILNDTQKEAV
                     GEYVISLSRGE"
     gene            16776..17000
                     /locus_tag="ACJE1S_000689"
     CDS             16776..17000
                     /locus_tag="ACJE1S_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HGG0806255.1"
                     /translation="MMENTNRCVFSLSGVTGMLIATVLLLAILVGLTIWGLKVQQEVM
                     QQPYSLKDIQNVKMLGSKEQDHKSIGGTAQ"
     gene            16997..17098
                     /locus_tag="ACJE1S_000690"
     CDS             16997..17098
                     /locus_tag="ACJE1S_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806256.1"
                     /translation="MSKVLEYLIVIGLVVTAAITAWSVLTANHLHIG"
     gene            17095..17685
                     /locus_tag="ACJE1S_000691"
     CDS             17095..17685
                     /locus_tag="ACJE1S_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806257.1"
                     /translation="MRKILQDGLLAIFLFFIPVQILALEPVVFNENILNQKVVDEINL
                     IGKELQEKSGIFAGVAIGDKSDFQTLLDLHKQLPQSYVLLVLSKNSHKVDIIGSKGAL
                     TLIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYGDMVDRLAQARGIELQHSIG
                     NANRDTINILRILIYGFICFALLYYAQRRMKRKKNA"
     gene            17678..18202
                     /locus_tag="ACJE1S_000692"
     CDS             17678..18202
                     /locus_tag="ACJE1S_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HGG0806258.1"
                     /translation="MLESKKTFWPYGILISIFAIVVACVATIIVASNYPVYEDDFYFD
                     SYQNVENNYNIIQKQQEQFDALFKVEFQNDKIDLIGKRKIASYTISADSYLAQFKITA
                     LNDQANIQNLKSEILLTRPHTREFDQKLLGQIQDGVLSVSLSQLEKGRWQLKIKLSTD
                     DEITGFFSYELNVQ"
     gene            18199..20565
                     /locus_tag="ACJE1S_000693"
     CDS             18199..20565
                     /locus_tag="ACJE1S_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HGG0806259.1"
                     /translation="MILRIFSSSRKIKEYQEKAKAKNALLDSAFLVSDFLDRVCVVNS
                     FKASSYESLLLMQEACLKSKDLEKKLGISAEFFAFLKNNEYLFSFFKELSLEKKSIQD
                     LKNNDYYATYNEHLEILDEVYTNYLLLLKQHNLYDDLSLAQEYKLNLDFLNEYESIYY
                     DLQGFLSKFEEDLLCEISKIKSTIISFKTSKFNLEYLLELDFLKDIHLELDMFYEVNL
                     SQKKILKQEKLSNPNTLVKLKAFELRSLQCAFVMDEISNFVRAGIDPEKIAVITPDES
                     FCELLKLFDKNNMLNFASGVSIKESLFYQKIKALYNGANSDAFIYKIDENYFEQEKMI
                     FDYHNTLLHYLELQFEDFRTRFDQICDLQYFENLIHSFLKDESQELMNLVQKELCFIK
                     DLLKNKSLKLKELMQLFFMQLDQIKLSYVGGGKVTVMGLLESRGLSFDGVVILDFNED
                     FVPKRSINELFLNNEVRKKAGLISYERRENLQRLYYENLMKNAKKLSISFVENEEQTR
                     SRFLDELDFNFFEEKTTPSKAYLNALKLDYQGVELNLNPIKVPVLKHDIFEKELSFSR
                     LNLFLYQKRTYFYRYILELPEARALSDESKAKNQGNFIHKMLEFYYKNYSKNNFNLKI
                     FNDLLEQEYPKYSISELELEIFKLKFIQFAENEKEHFKLGYKVIEQEEEHHKALNIQN
                     HTIRLKGIVDRIDKLEDKHFIIDYKSGKVPEKSFQLAFYKALCDENAEAKFYDLNQMQ
                     FVEEKAKSLDELKECLKDLLEQREEEIEFENDKDEYCPYKIIYKKDFR"
     gene            20562..23324
                     /locus_tag="ACJE1S_000694"
     CDS             20562..23324
                     /locus_tag="ACJE1S_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HGG0806260.1"
                     /translation="MKFKPFLALEASAGSGKTFALSVRFVALILQGAKINEILALTFT
                     KKASNEMKKRIIETFLNLEKESKKSECKELCELLGCEENELILLRDKKKQEFLRQELK
                     ISTFDSFFSRILRAFALNLGLSSDFDTSEEKLDVRAVFLKLLNRQELKDLAYYKVSLE
                     DNHDFFEELENFYENAYFKECVRIPNPSKASINQAYDDLRVYCLSLDHVKGYKYLCTH
                     FKDEVLQLSQFAKSDLLDLTGAPKYLQELEDSDAKFSQKRKAFIKALDAYAKELEEYK
                     IANLMNLLSHFSKAKDIIQKDKNTLSFNDISRRVLDLIRSDFKDMIYFRLDGYISHLL
                     IDEFQDTSVVQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDLL
                     QTEFKQIQKDQLTINYRSKQILVDFVNKTFQSKIKDYTPQLSLESKKGGFVRVIESQE
                     TKVDKDQAKEIQDKTLEALLEQLKFLKSKNIIYDDICILCWKNNDADMILDFLHEQDI
                     PAFTQSNILLENKACIRVLLEYAKYCIFGDKFYLHFLKEMLGFEPLKLKLDLAKSAVQ
                     NVLYLIKELKLDLNDMALIQFIEYAKSKDDFLKLLFEPCTLKIMSEQNRGINIMTVHK
                     SKGLEFDHVILLDSLSKNNPNNKTIMLEYDIDQGWELHIKDSYRKATQESEYKAFIDK
                     ITKADYEDDINKLYVAFTRAKDNLIIIKRNASFQSGNYPSYLNTMLDIEIQELGEIEI
                     QTNDTHLPQKESFQALMEFEKIPLQDIERKENTSSDEIYFGNAFHFFMQNLKLPQGEN
                     FDILCQKVSGKFRHFLNHDDFERLFKRIKNLLANAQFQKLIENKKLLKEQALSFQGEI
                     KQLDLLALGEDEAIIIDYKTGLNFNKHKEQVLLYKEAIEKILAKKSTQAFLVYVLEDK
                     VEIIEV"
     gene            complement(23321..24169)
                     /locus_tag="ACJE1S_000695"
     CDS             complement(23321..24169)
                     /locus_tag="ACJE1S_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WG repeat-containing protein"
                     /protein_id="HGG0806261.1"
                     /translation="MLICNHCNTKNLDIAKFCKECGNSDLYDPQAEEKLEQERRKQEE
                     LRRLEEEKRKIAQEEREKSLKQRKEFISKHKSKIIISMVSFFLIASLSIYQYFYGGKY
                     SRVYISKLEGKCHYDDASSCKMLQTIYKEKCDDGDGKACFAGIFVSGDLIRVKIDGQW
                     SFLDKNGEFAIEPKFDEAWVFSEGLAGVGLNGKWGFIDKSGKFVIKPKFDEAWDFSEG
                     LAKVELNRKWGFIDKSGKFVIKPKFDSIWSFREGLAKVGLNGKYGFIDKSGEFVIEPI
                     FDDIYY"
     gene            complement(24169..24969)
                     /locus_tag="ACJE1S_000696"
     CDS             complement(24169..24969)
                     /locus_tag="ACJE1S_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HGG0806262.1"
                     /translation="MFSLKFKIQEYLQCKNCLKINPEEDAKFCIFCGKELNHPARQRL
                     DYIYSKNPAIIVALLAKVAKADDKIITKDLSKFISSLLDKIEMFYSKEYSGFRNTYAS
                     IFEYEKNQGRSIHELCTGARFYEKEIDFLICLLLDLIYYDAKMSANENALMENIIVGL
                     GLNLIKFREVKLKYEQIYNFTHEKAQQEQPKEDKFTITLEQAYEILNSHPKDDFETIK
                     KNYRKLAKEYHYDNLYSKELPPELLKIAQEMMKKINLAYEIIKETRGA"
BASE COUNT         8756 a         3373 c         4560 g         8330 t
ORIGIN      
        1 atactatttt atccttagga gatgtaaaaa tgatacaaaa gtccttagct ttagctgaag
       61 aattacaagg aaaaatagaa gcaaacattt caaattctga aaaagaattc catgctaaaa
      121 tgcaaaagct tcttaataat cctgaaaata aagtcatgct gatcgaattg cttgaccgtt
      181 cttttagatg taaagataaa agagcaagtt ttgagcttat tgaacatact ttaaataagt
      241 atggtatagc agattttttt agtgcctttg agaaattctt actctttagc tttttaaatt
      301 ttggtaaatt cgcacctaat ttaagtgtgc cattttttgt aaaacattta agagaagata
      361 ctaaagctat ggttttggat gcaaatccta gtgttttaga acctcatatg cgcaaaagaa
      421 aagatcaaga taatatcact ttaaatgtga atttaattgg cgaagaggtt ttaggcgaag
      481 cagaaagcaa ataccgcatt caaaaatatg aagaagcttt aaaatcaagc tatattactt
      541 atatttcgat taaaatcact actatttttt cacaaattaa tattattgac tttgaatact
      601 ccaaggatga agtggttaaa agacttgatc atctttatgc tttagcctta gaagaagaaa
      661 aaaagcaggg tgtgagtaaa tttatcaatc ttgacatgga agaatttaga gatttggaac
      721 taaccgttgc tgcctttatg gaaagtgtgt ctaaatttga tattaaagca ggtattgttt
      781 tacaagctta catacctgat tcttatgagt accttaaaaa actttttgcc ttttcaaaag
      841 aaagagtttt aaaaggaatg aagcccatta aaattcgctt tgtaaaaggt gcaaacatgg
      901 aaagcgaaga gacgattgca agtcaaagag gatgggagct tcctactttt tataaaaaaa
      961 tagacacaga tagcaattat aacaaaatgc ttgattttgt tttagaggga gataattata
     1021 aatatatcaa tgtaggtatc gcaagccaca atatctttga aatcgcttat gcttacacac
     1081 gcatcagtga agcaggagct cttgattctt tcacttttga aatgcttgaa ggtatgagtt
     1141 tgcaatgttc ttatgaatta tctaaaatgc atgatttaat tctttatgca cctgtttgtg
     1201 atgaagcaca ttttaataat gccattgctt atcttgtaag acgccttgat gaaaatacaa
     1261 gcgaagataa tttcatgaga tattttttca atctcaaagt tggggataat aactggaatg
     1321 tgcaaaaaga acttttctta aaatctttag aaggaattaa aacgcttgat aatagcacac
     1381 accgcaccca agatagaaac aaagctccaa atatagtaag tgcttatgaa agtggaatgt
     1441 ttaataacga aagcgatacg gattttattt tgccacaaaa tagagcatgg gctaaagtca
     1501 taagagctaa atatgaaaat ttagaaaatt atgatgtaat gcctgtaatc ggagatttgg
     1561 aatttgataa aaatacttta aatattttag aagttaaaga taaaatcaaa gatagaatga
     1621 taggaaaagc ttatttagca ggcgaaaatg aaatcaaaaa agctcttaaa gtagctaaaa
     1681 attctaattt taaaaataca agttttgatg aaattcatgc tattttagct aaggctgcaa
     1741 atttgatgag agagcgtcgt ggggatttga taggtttggc tgcacttgaa gtaggaaaaa
     1801 ctttcttaga aattgatcct gaagtaagtg aggctattga ttttactgaa ttttatccac
     1861 attctttaaa ggttttaaga gagcaaaata aaaatactca atttagccct aaaggtatag
     1921 gagtaaccat agctccttgg aatttcccta taggtatttc agttggaacc atagcagcac
     1981 cattagcagc tggcaatgtc gtaatttaca agccttcttc gctttcaact ttaacaggct
     2041 atatgctttg taaatgtttt tgggatgcag gaattagcaa agatgcttta attttcttac
     2101 cttcaaaagg aagcgatatt tctaaatatt tacttgttga tgaagcagtg aaattctcta
     2161 ttcttacagg tggagaagat acggcttatg ctatgcttaa agcaaatcct accttgcttt
     2221 taagtgctga aacgggtgga aaaaatgcta cgattgtttc taaatttgca gatcgtgaca
     2281 gcgcgattaa aaatattatc cattctgctt ttagcaacag cggtcaaaaa tgctcggcta
     2341 cttctttgct tgttttagag gaagaagttt atgaagatga agaatttaaa aagactttag
     2401 tagatgcagc tgcttctatg gctgtaggaa atccttttga atttaaaaat aaattaggca
     2461 cattagcaga taagcctagt gctaaagtag aaaaagcctt aaatgaacta gcgccttatg
     2521 aagaatgggc tttaaaacct caatttttag aaaacaatcc ttatttgatg actccaggga
     2581 taaaatacgg caccaaaaaa ggtgatttca ctcatatgaa tgagcttttt gtaccgattt
     2641 taagtgtaat gaaagcaaaa gatttaaaag aagctataga gatagtcaat tcaacaggct
     2701 atggtcttac tgcaggattt gagagcttag atgaaagaga atgggagtat tttcacactc
     2761 atatagaagc aggaaatatc tatatcaata aacctacaac aggagctata gtacttcgtc
     2821 agccttttgg tggggtgaaa aaatctgcta taggttttgg tagaaaagtg ggaatttata
     2881 attacataac ccagttttta gatataagca caagtgaagc tgatgagaat ttgctcaata
     2941 acgaatttgt taaaacttta gaaaaaatag atcttggcac aaatgaagaa aataaaaaag
     3001 ctttaaacaa tgctattttg atggcaaaat cttatgcgta tcattacaga aatgaattca
     3061 gtgtttcaaa agattatgtc aatatacgcg gcgaggataa tctcttttct tatactaaga
     3121 ttaaaaattt agcttttaga gtgtgtgaga atgataattt gcaagatatt ttaggagtta
     3181 tcattgcagc caatatctta aatatcccat tgagcgtgag ctatgaagaa aacgataaaa
     3241 tttctttagt aaaagaactt tgcaaagcta taaatctaaa ccttgaaatc acaaatgaaa
     3301 gcaaagctca atttgtttca agattgaaga attttgagag aattcgctat catggaaaag
     3361 tgagtgtgga agatgaaatt tatcaagaag cggcaaaaga agctaagatt attatcagag
     3421 aaaaaccatt attaaatggt cgttttgagc ttttatttta tcacaacgaa aaagctttaa
     3481 gtgtatcttt ccatcgctat ggaaatttag gcattagagc gttaaatcat taaaccaagg
     3541 agtaaaaatg gaaacagttc aaattaatac ccccatagcg ataatgtttg tggcatatgc
     3601 tgctttaatg ctttatatag gtttttattt ttataggcaa aataaaaata cagaggatta
     3661 tttcctaggt gggcgttctt taggtcctgt agtttctgca ctaagcgcag gggcttctga
     3721 tatgagcggt tggcttttaa tgggtttgcc aggggctttg tatgcaagtg gacttataga
     3781 gagttatatt gctataggac ttagcatcgg agctttattg aattggagtt ttgtagcaaa
     3841 aagacttaga atttatacaa gtgtgattgc aaattctatt acaatacctg attatttcga
     3901 aacaagattt gatgatgata agcatatttt gcgtatagtt tgtgcgattg tcattttgat
     3961 attttttacc ttttatgttt catcaggact tgtgggtgga gcaaaattat ttgaagcaac
     4021 ttttggtata agatatgaat atgcgcttac tactgggacg cttattatcg ttgcttatac
     4081 ttttttaggc ggatataaag cagtttgttg gacggatttg cttcaaggac ttttaatgat
     4141 gggtgcattg atcgttgttc ctgctgttat gctttatcat ttaggtggtt ttggtgaggc
     4201 tatggctgtt atagaagaaa ttaagcctaa tgctttatcc atgggtgagg gtataggagc
     4261 attaagcatt gtttctgcac ttgcttgggg cttgggatat tttggacaac ctcacatttt
     4321 ggtgcgcttt atgtctattc gctctactaa ggatattcct gcggctacct ttgtaggaat
     4381 ttcttggatg gtgatttcct tgataggtgc ttgctttata ggtcttttag ggatagctta
     4441 tgtgcataaa tttgagctta ctcttcaaga tcctgaaaaa atctttattg taatgtcgca
     4501 acttttattt aatccatgga tagcaggtat tttactcagt gctattttgg ctgctattat
     4561 gagtactgca agttcacaac ttcttgtatc aagctctacc atagcagagg atttttataa
     4621 aagaattttc aacaaagaag catctaataa aactgtgatg aatttgggaa gaataggcgt
     4681 tttactggta gcattggttg cttttgtgat ttcaacagat aaagaatcaa gtgttttaag
     4741 tattgtagct tatgcatggg caggatttgg agcaagtttt ggttctgtaa tgcttttctc
     4801 tttattttgg agcagaatga caagaatagg agcgatttta ggtatgataa caggagctgt
     4861 tatggttgtt ctttggaaaa attatttagc agaactcttt aatttcccta tttatgaaat
     4921 agttccaggc tttgtagctg cttcagcagt gataatcatt gcaagcttac ttactcaagt
     4981 acgcccagga actaaagctg catatgaaag aatgttaaaa gaactttaag attttttaga
     5041 aaatgaggat atttgtttaa atatcctcca aatttcctac ttttttatct caaaatgaaa
     5101 ttttttgccc cagcttttaa aattaaaact agagcaaaag tttatcaact ctttaaattt
     5161 ggagccaaat ttaaggcttt tggattaaga accgaagtgt gggaccattt tgatcgattt
     5221 caagaatttt aaaaccacga ttttttgcat cttgaggtat agaattgata ctttgtggac
     5281 aatcgcaaag cacttctagg atttctccgc ttttaagttg cggcaaggca tctagcgtag
     5341 caatagcagg ataaggacaa gcttcacctt ctaaatttaa agtataagta attttcattt
     5401 tttatccttt ttgatttagt ttttgaaaga agtgtttttt ataaaataaa acacaagcaa
     5461 acattaaaat aaaaagagct agatttatga aaaacccacc caaatttcca aattcattga
     5521 gcaagttaat ttttacgccc tctttgaaag cgctaggtaa aaagtcataa gttagagcca
     5581 aaatcatcgt tcctatgatg tttgcaatac ccactatcat aaaatgactt tgtccctcgc
     5641 aagcgcgata agtccatccg cattcacaac cccctgcgaa aactatacca aaaccaaata
     5701 aaaatgcccc aatagccaca gcaggagaga gttcgatgag tttgctattg tgtccatgta
     5761 agatgaaagc aaaagcgatc aaagaagcga ttatcatacc gattaaagcg ccttttatag
     5821 cattttccct accaaataag aataaatctc taaaacaagc agtaaaacaa atttgtcctc
     5881 tggagatgat aaaaccaaac gcaaagccaa aaatgagtgc taaagctaaa agactttgtt
     5941 tgctttgtgt gcttatattg ccattaacaa gcacaagata aaacacccat attaaaaatg
     6001 ctacaaaaag aatactacct aaaacaaaat gaaatttcgc acgcgagttt tgtttgagca
     6061 aaggaatgtt ttctttattt gcacattgta attttgcttt aggtttaaaa aaggaagtgt
     6121 tacaaagttt tacaccaaga taaattccca aaaccataaa aacaccaaaa aaccaagtat
     6181 gcagtgaaaa ataaggtaag cctgtaaaaa agtttgccaa gttacaccca aaggcaagtc
     6241 ttgcgccata gcctgaaaga attccaccta ctatagcttg aaagattctt atattgctag
     6301 cgggtaagcg aaatttgact ttgttggcta aaagtgcggc tactaaacaa cctataaaca
     6361 tgcctataag catgattcca tcggttctcg ttaaaggagt accatttaaa ttttgctttt
     6421 gataataaga atatccattc aaatccatac ctaaaagctc taaaaattct ccaccccaac
     6481 gcgtcatttc tcccgtaaca gcccaaacac caccaaaaat tccaaagtat actgcactta
     6541 aaattccaag tgttatcata gcacgggaat tatcccaaaa attgattaaa tatttttgtt
     6601 tgaaagaatt caaagaagtt cctaaatacc gtaatcatca aaccttgatg ctaaaaaaag
     6661 agtgagatta taacctaatt ttaaattaaa gtcaaaaatc agtgatgctt tgataaaatt
     6721 ttgaaaattt attttgtttt tcatttaaaa atagctataa ttataacttt ggaagattag
     6781 cgtatctggt gatcgtcact gacttcaaat cagatgaaag ggtagttgac tattctttgg
     6841 ggagttcgat tctctcatct tctcgccgta aaatttaagg aaaataatga gtaaagcaga
     6901 tattattgtt ggaattcaat ggggtgatga aggtaaaggc aaagtagtag ataaattatg
     6961 tgaaaattat gactatgtgt gtcgcagtgc aggggggcat aatgcaggac ataccatttg
     7021 ggtaaatggt gtaagatacg cacttcatct tatgccaagt ggtgttttgc attcaaggtg
     7081 tattaatgtg attggcaatg gagttgtggt atctcctgaa gttttaatcg ctgaaatggc
     7141 tcaatttgaa aatttaaaag gcagattgta tattagcgat agagcacatt taaatttaaa
     7201 gcaccattct ttgatagata ttgctaaaga aaaactcaaa ggtaaagatg ctataggtac
     7261 gacaggtaaa ggtataggac cttcttatgc agataaaatt aaccgtaccg gacatagagt
     7321 aggagagctt ttagatcctc aaagacttca caatgcttta atgaaagatt ttgaagcaaa
     7381 taaaaattat ttagaatttt tagggattga aattcctgat tcagatgaat tacttagtga
     7441 tttaaaacgc ttcaatgaga ttttaactcc gtttataacc gatactacaa gaatgctttg
     7501 gaaagctttg gatgaggata aaaaagtgct tttagaaggc gctcagggct ctatgcttga
     7561 tattgatcat ggaacttatc cttatgttac aagctcaagt actatttcag caggcgcttt
     7621 aacaggactc gggttaaatc ctaaagaagc gggaaatatt ataggtattg taaaagctta
     7681 tacaacgcgt gtgggaaatg gagcttttcc tactgaggat aagggtgaag atggagaaaa
     7741 aattgcgcaa attggaaaag aaattggcgt aagcacggga cgtaaaagac gctgtggatg
     7801 gtttgatgca gttgctgtaa gatatacagc aagacttaat ggtcttgatg ctttatcttt
     7861 gatgaagctt gatgttttag atggttttga aaagataaaa atttgtcgtg cttatgaata
     7921 taagggcatg gaaatcgact atataccaag cgatttagaa aatgttcaac ctatttatga
     7981 agaaatagat ggttgggata aagtttttgg tataaaagat tatgatttat tgccagaaaa
     8041 tgctaaaaaa tatatagcaa gacttgaaga gcttgcaggg gttaaggtaa agtatatttc
     8101 tactagccct gaaagagatg atactatcat cttatgaaaa gtaaatataa ttctgttgta
     8161 aaggtaagaa aacaacaact tgataaagca gaatcaaatc ttaatcaagc caaacaaaga
     8221 cagcttgaac atgaaaaagc ttatgaactt tcacgccaag agtgtgaaag tttaggcgta
     8281 ttgccaaaat caggatctat agcagagtta agatcgaatt taagtatggc acaagtagga
     8341 cgcgaggctt tggcaagagc taaggagaaa gtagaacttt ctaaaaaaga aatgaatcat
     8401 tatcagtttt tatatcaaaa agcacattta gattatgaaa aaatgaaggt tttagaagcc
     8461 gaggaaatta aacaaaagca aaaagaactt gccaaggctg aagaaaaatt tttagatgaa
     8521 attgcaatca gtcgtttttt caaaggagaa aaagatgatt aaaaaattta tattgttagt
     8581 ttttatttca agtgtagttt ttggagctga acaagattgt gagcagtatt ttgaagctag
     8641 aaaagctcaa attgaattgc aaactagaga atttgatgaa gcaagacaat ctttagaagc
     8701 ttataaagcc tcttttgaag ctttgcaaaa agaaaggctt gaaaatttag aaaaaaaaga
     8761 ggctgaggtt aatgcaactt tggcaaaaat tgaagaatta aagcttgaaa acgcaaggct
     8821 tgtagaagaa caacaaaaga ttttaaattc aatcaatgat aaaactcaag gtagggttaa
     8881 agaaatttat tcgcaaatga aagatactgc aatagctgat gttttaaccc aaatggatgc
     8941 tgaagatgcg agtaaaatca tgctatcttt agagtctaga aaaatttcag gagtgctttc
     9001 taaaatggat cctgcaaaag cgagcgaatt gaccttattg ctaaaaaata tggataataa
     9061 taaaagcaat taaaaattta attttttaac attcttttac caaaaatata ttattatttc
     9121 aaaattatta gtgaaaaggc ttgaaaatgc gtataaaatt gccacatata ccttatatta
     9181 caaataaaat aatgttagat attgcacatt cctcttttgt tgaaattaaa gacaatattg
     9241 aaaagttaaa cccttgcatt aaacaaattt tagaagatga tcttatgaat gaaagaaagc
     9301 tagatgaaag agttaaagag cttttagaac aacaagaaga tgaaatggag cttatgcaag
     9361 tagatcgtaa aaatatgttt tggcttgtta agaaaaaatt agctcctgaa tttggtgtga
     9421 ttttaaattc tgaagataga cacaatcatt tagcgcatag aattttagaa gaacttatag
     9481 aaaatgatta tattaatttt gtggtaagcg aaaatagagt gaaaaattta attttttcta
     9541 gcatagatga ctatcttaaa atttatgaaa aattagaaga tgaggtttat gaaaaaataa
     9601 gcaattataa aacaaaacct attccaggta gcgaagaata tgagcttatt tttgaaaaac
     9661 tttaccaaga agagcttaga aaaaaaggaa tgttttaaat tatgaaagct tatatttata
     9721 tagaaaatga tattttttta actgctaagg cttttggcaa gggtggaact ttttttggcg
     9781 agcttgtatt taatacttct ttaacaggtt atcaagagat aatatctgat ccttcttatg
     9841 cagggcaatt tatcgtattt tctatgccag aaattggtat agtgggaacc aatgaaaatg
     9901 ataatgaaag caaggaaatt tttgcaagtg gcgttttgat gagagaatta agccctactt
     9961 tttctaattt tcgtgctcaa aaaagcttac aagaatactt agaagaacat ggaaaaatag
    10021 gagtttatgg actagacact cgctatttgg taaaaatgtt aagagacagc ggaaatttaa
    10081 gagcagttat ctcaactgaa atctctagca aagaagaatt aaaagcagct ttggaaaaat
    10141 ctgcaaaaat agatgagatt aattttgtaa aagaagtaag tactaaaaaa tcctacgctc
    10201 acaaacatgg agtttggaat aatgctaccc aaagttacaa taaggctaaa aaaaatacaa
    10261 aaaaagttgc tgttattgat tatggtgtga aagcaaacat tctcaatgag cttgtggaag
    10321 tgggtttaga agtagaagtt tttccttata ataccaaagc agaagaactt atcaagcttt
    10381 atcaaaaagg tcaaattcaa ggtgtatttc tttcaaatgg accaggagag ccaaaaattt
    10441 taaaacaaga aattgctgaa attaaaaaat tagccgaggc taaaattcct atgcttggaa
    10501 tttgtttagg gcatcagctt ttaagtaatg cttttggata tgaaacttat aaaatgaaat
    10561 ttggacaaca cggagctaat catcctgtga tcaacttaga aaacaaaagt gttgaaatca
    10621 ctgctcaaaa ccataattat aatgttcctg aagagctttg cgaagtagca attataacgc
    10681 atagaaatct ttttggagat aatgtcgagg gtgtaaggta taaagactat cctattattt
    10741 cggtgcagca ccatcctgaa agttcatcag gtccgcacga aagtaaatat atttttaaag
    10801 aatttatgaa tttaatgtga atttccttcc tctaaatttt gactttttgg ctatatttag
    10861 tgtagccttt ttatcgagct ttgggcattg ctattctatg tgtgggggat ttattttagc
    10921 ttttatgaat ttaaattcaa cccacaaaaa tttgttttta ttaactttta tttatcaatt
    10981 atttagaatt ttttcttata ttttattggg aataatcttt gggatatttg gaaatttatt
    11041 agctataaat gccaagattc aaagcttatc cttttttata ctcggtgtgt ttatggtaat
    11101 tttaggtttt tctttaattt ttagaggtaa aatccttgct tttatcgaaa atcgcacttt
    11161 ttttgagtat tttataaaaa agattattaa aaaatctatg ggttttaagg gtgtaaaatc
    11221 ggcaatgatt ttaggttttg ctaatgggtt tgttccttgt ggtttggtgt atttttttct
    11281 agcgaatgca atgagtaggc aaaatgttac agaaagcatt ttggttatgc tagtttttgg
    11341 tctttcaacc cttccagcaa tgcttttttt tgtcaaaata tcacaatatt tgggtgtatt
    11401 tttgaaaaaa gtatttaatt atttatctta tttcattatt gtagcttatg gaataggttt
    11461 agcttatatg ggttttaagg ctttttaaat ggcaaattca gttgccgagc aagttttaaa
    11521 agtaatagaa aaaaagacaa ttttctttaa gatcaatttg caaggtataa ttatcgatgc
    11581 aagtgaaaaa ttttgcaaga taagtggtta tagtaaaaaa gagttgattg gaaagcatca
    11641 ttttatttta aaacatcctg atgttaaaga aagttatatc aatcaacttt taggaaaact
    11701 ttggcaaaaa gaagcttatt gggtggtttt taaaaatgtc gataagctag gcaaaacttt
    11761 ttatcttgac gcatttttaa ttcctattgt agataataag ggtgatttaa atgaaattat
    11821 tgctttatct tatgatatta gcaattcttt taaattaaat gaagaacttg tattaaatca
    11881 tgcgaaattg cgtgaaatta gtgtaaatct tgaaaagaca gctaaagagc gcaaggaaga
    11941 atttgcaaaa ctaagcaaag attttgagta taagcttaaa gttgctttag aaaaaaatga
    12001 gaaagataca aaaaagattt ataaagaaat tttaaattct tctatagagc agatgattag
    12061 cgatattgca catcagtgga gacaacctct aaatgagctt ggtattgcta tgtttcaaat
    12121 gaaacaaaat gttcaagatg agaagggttt taccgaaatt tatctacaat ctaaaagtac
    12181 gataaaaaat atgtcagaaa caattgatat ttttagaact ttatttaaaa ataatgaaaa
    12241 cgaaaaaaat catgtttctt taagagaaat tttaaataag gtaattggca ttgcttttga
    12301 aaccatagaa aaacatcaag ttaatactcg aataatctca aaaacagatt atagagttat
    12361 agcgcatgag aatggcctaa tgagagtttt tttaaattta attataaatt ccatagaggc
    12421 atttaagact caaaaagtaa aaaatattat atttagtttt tccaaatttg gaaaaaatta
    12481 tattaaagtc aaggttaagg ataatgcagg cggggttgat gaagatattt tagacaaaat
    12541 ttttcaaccc tatattacaa ctaaacatcc tagtcaaggt ataggagcgg gactttacat
    12601 cagcaagcaa atcgtagaga gttttggtgg aaaaattcaa gttaaaaata taaaagatgg
    12661 tgcttgtttt gagatatatt taaagttgca agaggggaat taaattatga aagaattggt
    12721 tatattggtt gtagaagatg aagtaaaaat tagagaatcg cttgttaatg ttttatcttc
    12781 tcgttacagc aaggtaatag gtgcacaaaa tggtgatgag ggtttaaaga aatttaaaaa
    12841 atttaagccc gatttgatta ttacagatat tgctatgcct atcatggatg ggcttgatat
    12901 ggcaaaagaa attaaagaaa tagcaaatga tgttcctatt gtagtgctca gtgcttattc
    12961 ggaaaaagaa agattgttgc gttctattga tataggtata gataaatatt taatcaaacc
    13021 tgtagatgta gatgaacttt ttaaagtttt ggattattta gtgggtgaaa agatagaaac
    13081 taacgcgctt gttgatattt ctaaagagta tcaattcaat aagactaaaa gaatattaat
    13141 tcataaagga caagaaattg ttttaaccaa aaaagagctt gcttttattt cattgctttt
    13201 aaagcagcct ggggttttgg tattgcatga agatattaag aagaatgttt ggataggtga
    13261 gcatgttagc gatactgcgg ttagaacttt tataaaaaga gtaagagata aagttggaga
    13321 aaaatttatt aaaaatgttc caggtttggg atataaaatc aatatagaaa attaggataa
    13381 aaaaattctt taaaatataa aaaataacaa atgattaaca aaaatattgg ctttaagaaa
    13441 aaatgtataa ttaatagtct ataatataaa cttgttatct taaaaatttt aaggagaaag
    13501 tcgatgcacc caggtaatgc attaaattac gactatacag ttgcaaaata ctttatgttt
    13561 gcgactatat tgttcgggat tgtaggtatg gctataggaa ctcttatagc ttttcaaatg
    13621 gcatatccta atctaaacta tttagcaggc gaatatgcta ctttttcaag acttagaccg
    13681 cttcatactt ctggtgtgat ttttggtttt atgctttcag ggatttgggc aacttggtat
    13741 tatataggac agcgtgttct taaagtaagt atggctgaat ccaaatttct aatggctata
    13801 ggcaagcttc atttttggct ttatatgatt accatgattg tagctgtaat ttctttattt
    13861 gcaggtgtaa gtacctctaa agagtatgct gaacttgagt ggcctttaga tattcttgtt
    13921 gtgcttattt gggttttatg gggtgtaagc atttttggac ttattggaat tcgccgtgaa
    13981 aaaacccttt atatttctct ttggtattac atagctacat ttttaggtat tgctatgctt
    14041 tatcttttta acaatatggc agttccaact tattttgttg cagaaatggg taaatggtgg
    14101 catagtgtat ctatgtatgc agggacaaat gatgctttag ttcaatggtg gtatgggcac
    14161 aatgcggttg cttttgtatt tactgtgggt attattgctc aaatttatta tttcttacca
    14221 aaagaaagcg gtcaaccgat tttctcttat aaactttctt tatttgcgtt ttggggcttg
    14281 atgtttgttt atctttgggc aggtggacat cacttgattt attcaactgt gcctgattgg
    14341 atgcaaacta tgggttcggt tttctctgta gtattgattt taccttcttg gggttcagcg
    14401 ataaatatct tacttactat gaagggtgaa tggagtcaac ttcgtgaaag tcctttgatt
    14461 aaatttatga ttttagcatc aactttctat atgttctcaa cacttgaagg cccaattctt
    14521 tcaattaaat cagtaaatgc tctagctcac tttacagatt ggattccagg acatgttcat
    14581 gatggaactt taggttgggt tggttttatg actatggcag cactttatca tatgactcct
    14641 agaatattta gaagagagct ttatagcaaa tctttaatgg aagcacaatt ttggattcaa
    14701 actacaggta tagtgcttta ttttgcttct atgtggatag caggtatcac tcaaggtatg
    14761 atgtggagag ctacagatga atacggcaac ttgctttaca gctttattga cactgttgta
    14821 gctattatac cttattattg gattagggca attggtggtt tattatatct tataggattt
    14881 ttcatgttta cttataatat ttataaatca attgcttgtg gaaaagtgct tgataaagag
    14941 ccaaaaagcg cttcgcctat ggctgcataa aaaggagaga aaatgtttag ttggttagaa
    15001 aaaaatccat tcttttttgc tgtcgctgtt tttattgtga ttgcttatgc tgggattatt
    15061 gaagtgctgc caaattttgc agaaaatgca agacctatag aaggaaagaa gccttataca
    15121 gttttacagc ttgcaggacg ccaaatttat atcaaagata gctgtaatgc ttgtcattca
    15181 cagcttattc gtccttttaa atctgaaact gatcgttatg gtatgtattc tgtcagtggc
    15241 gaatttgctt atgatagacc ttttctttgg ggttcaaaaa gaacaggtcc tgatttaatg
    15301 cgtgttggaa attatagaac tacagactgg catgaaaacc atatgtggga tcctgtttca
    15361 gttgttccaa attctattat gcctgcttat aagcatatgt ttaaaaacaa tgccgacatg
    15421 gaaactgctt atgcagaagc tttaactgtt aaaaaagtgt ttaatgtccc ttatgatact
    15481 gaaaatggaa ccaagttagg tacttgggaa gaagcacaag ctgaaataaa agccgaagca
    15541 caagctatag ttgatcaaat gaaaaatcaa gaggtaaaag atgcttttgc taggggcgag
    15601 attaaagaaa tcgttgcttt aatcgcttat ttaaatagct taaagtaaaa atatggaaca
    15661 tttagtgatt atttggaatg tgattaaaaa tttggtcact ttgaatttat cagcagtgca
    15721 aaaacatgaa tgggaaattt ttcaaggtta tggatttttt ctatttgtaa tgtttttatc
    15781 aatagtattg tattcttatt ggtatcatct ttatagggca gaaaaaaaag gcgagagaaa
    15841 ttatgaaaaa tatgcaaatc tcgctttgag cgatgatatc gatgatagtg ttttagaaag
    15901 taaaaggagt gcttgatgca atggttaaat ttgcaagata atgttaattt attatctttc
    15961 attggagcga ttcttattat attgattact cttgtagtcg ttggtagaat gtttaaatat
    16021 atgaaagaga aaaaaggtga ggcagaatta agtgagcata gctgggatgg cataggagaa
    16081 tataaaaatg cgattccaat aggctgggct gttatattct ttcttaccat agtatgggca
    16141 gtttggtatt ttttatgggg atatccttta aattcttact caagtatagg tgagtacaac
    16201 gaagaagtta aggcttacaa tactaaattt gaagaaaaat tccaaaactt atctactgaa
    16261 gataaggtag ctatgggaca aaatatcttt ttggttcaat gctctgcttg tcatggaatt
    16321 actggtgatg gtatcaatgg aaaagctcaa aatttaaata tttggggtag cgaagagggt
    16381 ttaatcgatg cgattaaaca tggtgcaaaa ggtatgaatt tcccaggtgg agaaatgcct
    16441 gctgctgcgg atttgggaat tgctgaagaa gatattcctg cgattgctgc ttatgtagca
    16501 aaagagcttt ctgctatcaa gaaaacttct aatgaaaatt tggttgctaa aggaaaagag
    16561 gcttatgcaa cttgtgcagc ttgccatggt gaagatggaa aaggtcaaga tggaattttc
    16621 cctgatctta caaaatacgg ctcagcagca tttgttgtag atgttttaca tagtggtaaa
    16681 acaggcttta ttggagctat gccagcattt tctatattga atgatactca aaaagaagct
    16741 gttggtgagt atgtaatttc tctttcaagg ggtgaataat ggaaaacact aatagatgcg
    16801 tattttctct ttcaggtgtt acgggtatgc tgattgctac cgttttattg cttgcaattt
    16861 tagtaggttt aaccatttgg ggtcttaaag ttcaacaaga agtaatgcaa cagccctaca
    16921 gccttaaaga tatccaaaat gttaaaatgc ttggttcaaa agaacaagat cataaaagca
    16981 taggagggac agcgcaatga gtaaagtttt agaatatttg attgttattg gcttagttgt
    17041 gactgctgcg attactgcat ggtcggtttt aactgcaaac catcttcata taggatgaga
    17101 aaaatactac aggatggctt attagccatc tttttatttt ttatacctgt gcaaattctt
    17161 gcccttgagc ctgtagtttt taatgaaaat atacttaacc aaaaagttgt tgatgagatt
    17221 aatcttatcg gtaaagaact tcaagaaaaa agcggaattt ttgccggcgt agcaattggc
    17281 gataagagcg attttcaaac tttattagac ttacataagc aactcccaca atcttatgtt
    17341 ttgcttgttt tatctaaaaa ttctcataaa gtcgatatca taggttctaa aggagcttta
    17401 actttaatcg ataaagaagc tgtgcttagt ccttatccag gaacaggatc tattttgcct
    17461 attttagcga ccaataaagg cgatatttat aatgcggcta ttttaaatgg ctatggagat
    17521 atggttgatc gtttagcaca agctagaggg attgaattgc aacactctat aggcaatgca
    17581 aaccgcgata ctatcaatat tttaagaatt ttaatctatg gctttatttg ctttgcgttg
    17641 ttatactacg ctcaaagaag aatgaaaagg aagaaaaatg cttgaaagta aaaaaacctt
    17701 ttggccttat ggaattttaa tttcgatttt tgctattgtg gttgcttgtg tggcaactat
    17761 tatagtggca agcaattatc ctgtatatga ggatgatttt tattttgact cttaccaaaa
    17821 tgttgaaaat aattataata ttatccaaaa acaacaagag caatttgatg ccttgtttaa
    17881 ggttgaattt caaaatgata agattgattt gattggtaaa agaaagattg caagttatac
    17941 aatcagtgca gattcttatc tagcgcaatt taaaataaca gccttaaacg atcaagcaaa
    18001 tatacaaaat ttaaagagtg aaattttact tacaagacct cacacaagag aatttgatca
    18061 aaaactttta gggcaaattc aagatggagt tttaagtgta tccttgtctc agcttgaaaa
    18121 aggtagatgg caactcaaaa tcaaacttag cacagatgat gaaataacag gcttttttag
    18181 ctatgaatta aatgttcaat gatactaaga atatttagtt cctcaagaaa gattaaagaa
    18241 tatcaagaaa aagcaaaggc caaaaacgct ttacttgatt ctgcttttct tgtatcagat
    18301 tttttagatc gagtatgcgt ggtaaattct tttaaagcaa gctcttatga gagcttgctt
    18361 ttaatgcaag aagcttgttt aaaaagtaaa gatttagaaa aaaaactagg tatttcagct
    18421 gaattttttg cttttttgaa aaataacgaa tacctttttt ctttttttaa agaattaagt
    18481 ttagaaaaaa aaagtataca agatcttaaa aacaatgact attacgcaac ttataatgag
    18541 catttagaaa ttttagacga ggtttataca aattatcttc ttttgcttaa gcaacacaat
    18601 ttatacgatg atttatcctt agctcaagaa tataaactta atttagattt tttaaacgaa
    18661 tacgaaagta tatattatga tttacaaggt tttttaagca aatttgaaga ggatttgttg
    18721 tgtgagattt ctaaaatcaa aagcacaatc ataagcttta aaacaagcaa atttaatctt
    18781 gaatacctac tagaacttga ctttttaaaa gatatacact tggaacttga tatgttttat
    18841 gaagtcaatc tttcacaaaa aaagatttta aaacaagaaa aactttcaaa tcctaacact
    18901 ttagtcaagc taaaggcttt tgagcttagg tctttacaat gtgcttttgt tatggatgaa
    18961 atttctaatt ttgtccgagc aggaatagat cctgaaaaga tagctgttat cactcctgat
    19021 gaaagttttt gtgagctttt aaaacttttt gataaaaaca atatgttaaa ttttgctagt
    19081 ggagtaagca ttaaagaaag tttgttttat caaaagatca aagccttata caatggagca
    19141 aattcagacg cttttatcta taagatagat gagaattatt tcgaacaaga aaaaatgatt
    19201 tttgattatc ataatacttt gttgcattat ttagaacttc aatttgaaga ttttagaact
    19261 cgctttgatc aaatttgtga tttgcagtat tttgaaaatt taatccacag ttttttaaaa
    19321 gatgaaagtc aagagcttat gaatttggtg caaaaagagc tttgttttat aaaggacttg
    19381 ctcaaaaaca aatccttaaa gcttaaagaa ctcatgcaac tttttttcat gcaattagat
    19441 caaataaagc taagttatgt gggtggtgga aaagtcactg ttatgggact tttagaaagc
    19501 aggggactta gttttgatgg cgttgtcata cttgatttta atgaagattt tgttcctaaa
    19561 agaagtatta atgagttgtt tttaaacaat gaagtgcgta aaaaagcagg gcttataagc
    19621 tatgaaagaa gagagaattt acaaagactt tattatgaaa atttgatgaa aaatgctaaa
    19681 aaacttagca ttagttttgt ggagaatgaa gagcaaactc gatcgcgttt tttagatgag
    19741 cttgatttta atttttttga agaaaaaacc acaccttcta aagcctattt aaatgcttta
    19801 aaactcgact atcaaggcgt agagttaaat ttaaatccta taaaagtacc tgttttaaaa
    19861 cacgatattt tcgaaaaaga attatcgttt agtcgtttga atttattttt atatcaaaaa
    19921 agaacttatt tttatcgcta tattttagaa ttacctgaag ctagagcctt aagcgatgaa
    19981 agcaaggcca aaaatcaagg aaattttatc cataaaatgc tcgagtttta ttataagaat
    20041 tattctaaaa ataattttaa cctaaaaatt ttcaatgatt tgttagagca agaatatcca
    20101 aaatacagca ttagcgaact tgagcttgaa atttttaaat taaaatttat acaatttgcc
    20161 gaaaatgaaa aagagcattt taaattaggt tataaggtga ttgagcaaga agaggaacat
    20221 cataaagctt taaatatcca aaatcatacg atcaggctta agggtattgt tgatcgtatt
    20281 gataagcttg aggataaaca ttttatcatt gattataaaa gtggaaaagt ccctgaaaaa
    20341 tcctttcagt tagcttttta taaggcttta tgcgatgaaa atgcggaagc aaaattttat
    20401 gatttaaatc aaatgcaatt tgttgaagaa aaggccaaaa gcttggatga gcttaaagaa
    20461 tgtctaaaag atttgcttga gcaaagagaa gaagagattg aatttgaaaa cgataaagat
    20521 gagtattgcc cttataaaat catctacaaa aaggatttta gatgaaattt aagccttttt
    20581 tagccttaga agcaagcgca ggaagcggta aaacttttgc cttaagtgtg cgttttgtgg
    20641 ctcttatttt acaaggagca aaaataaatg aaattttagc tctaactttt accaaaaaag
    20701 caagcaacga aatgaaaaaa aggattatcg aaactttttt aaatttggaa aaagaaagta
    20761 aaaaaagcga gtgtaaagag ctttgtgagc ttttagggtg cgaagaaaac gaactgatac
    20821 ttttaagaga taaaaaaaag caagaatttt taagacaaga acttaagata agcacatttg
    20881 attctttttt tagccgaatt ttaagagcct ttgctttaaa tttgggattg agtagcgatt
    20941 ttgatacgag tgaagaaaag cttgatgtta gggctgtttt tttaaaatta ctcaatcgtc
    21001 aagaattaaa agatttagct tattataagg tgagtttaga agataatcat gatttttttg
    21061 aagagcttga gaatttctat gaaaatgcgt attttaaaga atgcgtaagg attcctaatc
    21121 cttcaaaagc ttctatcaat caagcctatg atgatttaag ggtttattgt ttaagcttag
    21181 atcatgtcaa aggatataaa tatttatgca cacattttaa agatgaagtg cttcaattaa
    21241 gccaatttgc aaagtcagat cttttggatt taacaggtgc tccaaaatac ttgcaagaat
    21301 tagaagatag cgatgctaaa ttcagccaaa aaagaaaagc attcatcaaa gctttagatg
    21361 cttatgctaa agagcttgag gaatataaga tcgcaaattt aatgaacctt ttaagccatt
    21421 ttagcaaggc taaagatatc atccaaaaag ataaaaatac tttgagtttt aatgatatta
    21481 gccgaagggt gctagatctt atcagaagtg attttaaaga tatgatttat tttcgcttgg
    21541 atggttatat ttctcattta ttaatcgatg aatttcaaga tactagcgtg gtgcagtatc
    21601 aaattttaag acctttgatc gccgagcttg tttcgggcga gggcgtgaag aaaaatagaa
    21661 ccttttttta tgtgggcgat aaaaaacaaa gtatctatcg ttttagaaag ggtaaaaaag
    21721 aactttttga tttgttgcaa actgaattta aacaaattca aaaagatcaa ctcacgatca
    21781 attaccgctc taaacaaatt ttggttgatt ttgtcaataa aacctttcaa agcaagatta
    21841 aagactacac ccctcaactt tctttagaaa gcaaaaaagg tggctttgtg cgtgtgatcg
    21901 agtcgcaaga aacaaaggtg gataaagatc aagctaaaga aattcaagat aaaaccctag
    21961 aagctttgct agagcagctt aaatttttaa aaagtaaaaa tatcatttat gatgatattt
    22021 gcattttgtg ttggaaaaat aacgatgcgg atatgatttt ggatttttta cacgagcaag
    22081 atatcccagc ctttactcaa agtaatattt tactcgaaaa taaagcctgc ataagagtgc
    22141 ttttagaata cgctaaatac tgcatttttg gcgataagtt ttacttgcat tttttaaaag
    22201 aaatgttagg ttttgagcct ttgaaattaa agcttgattt ggcaaaaagt gctgtgcaaa
    22261 atgtgcttta tttgatcaaa gaattaaaac ttgatcttaa tgatatggct ttgattcagt
    22321 ttatagaata cgctaaaagc aaggatgatt ttttaaagct tttgtttgag ccttgcactt
    22381 taaaaattat gagtgagcaa aatagaggta taaatatcat gactgtgcac aaatccaagg
    22441 gcttggaatt tgatcatgtg attttacttg atagtctttc aaaaaacaat cccaacaata
    22501 aaaccataat gcttgagtac gatatcgatc aaggttggga gcttcacata aaagatagct
    22561 accgaaaagc gactcaagag agcgaatata aagcttttat agataaaatc acaaaagcag
    22621 attacgaaga tgatatcaat aagctttatg ttgcttttac aagagcaaaa gacaatctta
    22681 tcatcatcaa aagaaatgcc tcgtttcaaa gtggaaatta tccaagttat ttaaacacta
    22741 tgcttgatat tgaaattcaa gaattaggcg agatagaaat tcaaaccaat gacacccact
    22801 tacctcaaaa agaaagcttt caagccttaa tggaatttga aaaaattcct ttgcaggata
    22861 tagaaagaaa agaaaataca agctcggatg aaatttattt tggaaatgct tttcactttt
    22921 ttatgcagaa tttaaagctt ccacaaggag aaaattttga cattctttgt cagaaggtga
    22981 gtggtaaatt tagacatttt ttaaatcacg atgattttga aaggcttttt aaaaggataa
    23041 aaaatttact tgctaatgcc caatttcaaa aactcatcga aaataaaaaa ttgctcaaag
    23101 agcaagcttt gagttttcaa ggtgagatta aacagcttga tttgcttgct ttaggcgagg
    23161 atgaagctat cattatagac tataaaacgg gtttgaattt caacaagcat aaagagcagg
    23221 ttttgcttta taaagaagct atagagaaga ttttggctaa gaaatcaact caagcttttt
    23281 tagtctatgt tttagaagat aaggtggaga taatagaggt ctaatagtat atatcatcaa
    23341 atataggctc gattacgaat tctccacttt tatctataaa accgtatttt ccatttaacc
    23401 ctacttttgc taatccttct ctaaagctcc aaatactatc aaatttaggc ttgattacga
    23461 atttcccact tttatctata aaaccccatt ttctatttaa ctcaactttt gccaatcctt
    23521 cgctaaaatc ccatgcctca tcaaatttag gcttgattac gaatttccca cttttatcta
    23581 taaaacccca ttttccattt aacccaactc ctgccaatcc ttcgctaaaa acccatgcct
    23641 catcaaattt aggctcgatt gcaaattctc catttttatc taagaagctc cactgtccat
    23701 cgatttttac ccttattaaa tcgccgctta caaagatacc agcaaaacaa gctttaccat
    23761 ctccatcatc gcatttttct ttatagatag tttggagcat tttacagcta cttgcatcat
    23821 cgtagtggca ttttccctca agtttgctta tataaactct gctgtatttt ccaccataaa
    23881 aatactgata tatgcttagc gaagctatca aaaagaaact caccatgcta attatgattt
    23941 tgcttttatg ttttgagata aattcttttc tttgtttgag acttttttct ctttcttctt
    24001 gagctatttt tcttttctct tcttctagtc ttcttaattc ttcttgtttt cttctttctt
    24061 gttctagttt ttcttctgct tgcggatcgt ataaatcact atttccacac tctttgcaga
    24121 atttagctat atctaaattt tttgtattgc aatgattaca aataagcatt atgcacccct
    24181 tgtttctttg atgatttcat aggctaaatt gatctttttc atcatctctt gagctatttt
    24241 taaaagttca ggtggaagtt ctttggagta gagattgtca tagtggtact ctttggctaa
    24301 ttttctataa tttttcttga tagtttcaaa atcatcctta ggatgagaat ttaaaatttc
    24361 ataagcttgt tcgagagtga ttgtaaattt gtcttctttt ggttgttctt gctgtgcttt
    24421 ttcatgagta aaattataaa tttgttcata ttttagcttt acttctctaa attttataag
    24481 gtttaatcca agtcctacga tgatattttc cataagagca ttttcatttg cgctcatttt
    24541 tgcatcataa tatatcaaat caagcagtaa acatatgaga aaatcgattt ctttctcgta
    24601 aaatcttgca ccagtgcaaa gttcatggat acttctgcct tgattttttt catactcaaa
    24661 aatacttgca taagtatttc taaatccact gtattcttta gaataaaaca tctctatctt
    24721 atcgagcaaa gaagatataa atttggataa atcttttgtg atgattttat catctgcttt
    24781 tgcaactttt gccaaaagcg ctactatgat agcgggattt ttactgtaaa tataatcaag
    24841 cctttgtctt gcgggatgat ttaattcttt tccacaaaat atacaaaatt tagcatcttc
    24901 ttcagggttt atcttaagac aatttttaca ttgaagatac tcttgaattt taaattttaa
    24961 agaaaacaaa ataaaacctt atttttaata taataaaaag taattttaac aaggatata
//
LOCUS       DBBXOW010000017        24818 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.017, whole genome shotgun sequence.
ACCESSION   DBBXOW010000017 DBBXOW010000000
VERSION     DBBXOW010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24818
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.017"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            16..687
                     /locus_tag="ACJE1S_000697"
     CDS             16..687
                     /locus_tag="ACJE1S_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HGG0806263.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLTQFNIKITNFENPKEALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKYNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMHARIMSLIRRTKRAENTNNENINSAFKIDERKHEITYQNKVLTLTPAEYEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRTKINDSSKAPKHIFSVRGIG
                     YKLIG"
     gene            684..1934
                     /locus_tag="ACJE1S_000698"
     CDS             684..1934
                     /locus_tag="ACJE1S_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsS family sensor histidine kinase"
                     /protein_id="HGG0806264.1"
                     /translation="MTRNYSIYTKLVILFVVTFFLVCVLFIVLLKIESNTYSEEEGFK
                     QESFIKNIINSYGNASGVDIGAHLNNSGFVAIQNDYFVKIARLEGQSLFRAGNGENAC
                     TLTSLKYQNKLYLDVQCKDFSALFEEDTNNRVYNLLLIGFFFFSFLVVFMYFSVLKSL
                     EPLKKLRKQVAEVANGGKADFENYQEDEVGKIALEFQKAFKKNQELIQSRQLFLRTIM
                     HELKTPIGKGRIISEMLQEEKQKERLIDIFLRMDSLINEFAKIENLFSKNYNLQFKPV
                     HFSTILNEAKDYLMRDDFNRVVKLNLKHDALINVDMEIFPLILKNLIDNALKYSSNGT
                     CELYCCKECFVIKNPGNPLREPIEHYFEAFTREPYQKVKGMGLGLYIVFEVCKLHNFD
                     IIYFYEEGKHCFKIFFGVKTNNDA"
     gene            1924..2499
                     /gene="recR"
                     /locus_tag="ACJE1S_000699"
     CDS             1924..2499
                     /gene="recR"
                     /locus_tag="ACJE1S_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HGG0806265.1"
                     /translation="MTHKGIEKFNELVESFAKLPTIGKKTAIRLAYHICTGNQLEGMK
                     LAHNIENAIRFIKPCQQCGSLSENELCEICTDDERDKNCLCIVQSPKDVLVIEESKSY
                     GGLYFVLDELNDEKLAQLRQMILKLQSKELIFAFTHNLNSDAMIFYIEDRLKDLNLQF
                     SKIAQGIPSGVNLENVDFISLNKAINFRTKV"
     gene            complement(2501..3034)
                     /locus_tag="ACJE1S_000700"
     CDS             complement(2501..3034)
                     /locus_tag="ACJE1S_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HGG0806266.1"
                     /translation="MKFLVLGIGNIMFADEGIGVHLCKLLEKNYKFTHSNHSLDFVDG
                     GTLALQLSYIIAEYDKMIVLDCIDADDSKIGDVFFFPYDAMPKKINWSGSAHEVEMLQ
                     TLQYMELMGDLPHTQILACVPKRIKPMSFTLSQEIVSAGEIMEKTLLEYLTKEGFSYE
                     KIANHSLQELADISYKN"
     gene            complement(3031..3723)
                     /gene="cybH"
                     /locus_tag="ACJE1S_000701"
     CDS             complement(3031..3723)
                     /gene="cybH"
                     /locus_tag="ACJE1S_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HGG0806267.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAFAIVVLVITGYYLSYV
                     FQNPISNGEPVNFMQAKYRMVHQAVGFVLIACVIFKVYLFFFDRISRKERISIVDALN
                     PKLWIEQIKFYLFLGKHPHLKGVYNPLQFVTYIFFYIVMVGIILTGLILYTHTYHEGL
                     GGLLYEVLRPLEAALGGLADVRTYHRILMWVILIFVPVHIYMAFFNAIKGKDGAIDAI
                     VSGYKFVKEEKN"
     gene            complement(3735..5450)
                     /locus_tag="ACJE1S_000702"
     CDS             complement(3735..5450)
                     /locus_tag="ACJE1S_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HGG0806268.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLTPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLSPARMGEYMEKFKEVQDFVNRAYYPDLVMAGKAYADEPSVLNDI
                     GVNNLYTFQEFQLGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YEGKTNPNYTGLVEGESVDHHGNTVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCLEAKIVANNALKAFRNLVE
                     NLKVDESTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNASL"
     gene            complement(5456..6595)
                     /locus_tag="ACJE1S_000703"
     CDS             complement(5456..6595)
                     /locus_tag="ACJE1S_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HGG0806269.1"
                     /translation="MIDYNQIESRLSALEKLPSLNPENSIPKALERSGFTRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVIWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIEKYKNKYILMVEGGIPMGDTENFLTIGPHGKS
                     GYELSKVASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVQNFGDEGAK
                     NGYCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SRKFDTVFGLGADNVSDKIGIGVLTLTGVAIAAHAVIASMKKNEE"
     gene            complement(6728..8563)
                     /gene="mnmC"
                     /locus_tag="ACJE1S_000704"
     CDS             complement(6728..8563)
                     /gene="mnmC"
                     /locus_tag="ACJE1S_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004808 - tRNA
                     (5-methylaminomethyl-2-thiouridylate)(34)-
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HGG0806270.1"
                     /translation="MKKANLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYSEAFEFEE
                     NDTFIIAESGFGIGLNFFLTLKRFLQAKKRPKKLFYTSIEGFYIEKDKLREIYQKLGF
                     YEEFKEILEAFLKFYPKAKKGYYRFYFKDCFLDLIFDDIAILRELDFNADVWFLDGFS
                     PSKNSAMFDENFIAQVARLSKTNTQICTFSASSALQKNLIKYGFEIQKTKGFRKREMI
                     KAFLRKEYPTLDKEAYFQRIPSLYKNKKVAIIGSGICGATLAYELSLRDFEVSVFEKN
                     DSLGCGASGNESGILSSLILKPDVALGEFSQLAFIEASRFYKQILDLNLKGVIEFAHT
                     PLMQERFISQKDNILFKIDKNEAFLEDGGHIKPKEILKSLFEKSQAKMYFNHEYDFFQ
                     YQEDKFILHFKNQKAMQDFDILIYAMGADTKDFLVYDGMLLSKVRGQVTHLKPFLDNA
                     FALSSKAYICPSDGDLQVIGASYDRLNSNPNPQKADDEENLQNIQEFLKGDEEIIIKG
                     SRVGFRSYSSDRFAIVGAAYDEAFYKQEYKALLWTKNKAQVLPQNIPNLYLNLAHGSR
                     AFSTSVLAARYLCALINEEPLGVFKNFIPCIHPARFLIRKLKKGI"
     gene            complement(8560..10530)
                     /locus_tag="ACJE1S_000705"
     CDS             complement(8560..10530)
                     /locus_tag="ACJE1S_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG0806271.1"
                     /translation="MFRILVFCIALFSICFGAYENELANFDKNFIASKNDAQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNALNLDDKSYANELEESGVSKASINALRKA
                     VIKDKQKVQPDSKNVEVSSFEPPKSTSKPPQTKQESTKTQNNKPQQTKKVDKVYVLKS
                     SKTSQGVVLDLNTNLEQKDIKSFALDEKGNYRYISDFEGILEGGRKEYKFDDYRIVIS
                     QYNPKMIRIVAYAKEKIPLNFDFEDEKISISKKSQAIQKSTPSKQESKTAAKQESEKV
                     VAKQESKPVKTQEAKTNTKKEQENDEPLYVLDVDKSSNSVVLNLSDELDEKDITSFST
                     KDQKFFRQVVSFQGILEGSRKNFTFGQNAVTVTQYNPKTVRIVLSSTKEFKLFKDLDD
                     KSLTLGFSGSTSKSTSTSSKSTSKTASKNVLNSNFKSDKLIVLDAGHGGKDSGALSDK
                     KGSLKEKDIVLSTTLKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLFLSI
                     HANAAPSASKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILNFLN
                     REKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITH
                     PSEGKRIANKSFQDTLVKGIADGVENYFYNNR"
     gene            complement(10530..11621)
                     /locus_tag="ACJE1S_000706"
     CDS             complement(10530..11621)
                     /locus_tag="ACJE1S_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HGG0806272.1"
                     /translation="MSLKSLQIGKHTIKYPIFQGGMGLGISWDKLASAVSLNGGLGII
                     SSVGTGYYENRTHISKELNAKPYGSENFYSREGLQTLINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNIIVSGAGLPTNLPEFTADFPDVALVPIISSPKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLENLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASDEFKNVLLACKKEDIELIKSPVGY
                     PARGVRTNLLDLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLEKLISVKELMDKLVNGE"
     gene            complement(11618..12823)
                     /gene="tyrS"
                     /locus_tag="ACJE1S_000707"
     CDS             complement(11618..12823)
                     /gene="tyrS"
                     /locus_tag="ACJE1S_000707"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HGG0806273.1"
                     /translation="MDIKNILAEIKRGCAEIIDEERIENLIKNYYEKGENFFVKAGFD
                     PTAPDLHLGHSVVLTKMAYLQKHGAIVQFLIGDFTGQIGDPSGKSVTRKKLDKEQVLQ
                     NAKTYEEQVFKILDPQKTQLKFNSQWLNELGATGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKCDIEMGGTDQKFNLLMGRTLQRIYNIGKEQAVMM
                     MPLLEGLDGVNKMSKSLGNYIGVTEKANDMYAKILSISDELMWRYYELLSTKSLEEIE
                     NMKKEISSGNLHPKLAKENLALEITTRFHNEESAKAAKAEFDSVHSGNALPSDIKEFE
                     IEGEIWLAKALVECGLENSTSAARRSINANAVSVNSQKVSDEQMQLGTGEYILQVGKR
                     KFAKLKVNI"
     gene            complement(12839..15034)
                     /locus_tag="ACJE1S_000708"
     CDS             complement(12839..15034)
                     /locus_tag="ACJE1S_000708"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG0806274.1"
                     /translation="MKPVDEELLLEKLIEDIKNCRDLTRAKELLFSICQEDAIVEKAV
                     DYCIKSHEGQVRKSGEPYAVHPILVASLVAFLSENKATILAALLHDVIEDTQCTEEEL
                     RDQFGSEVLKLVLGLTKIVEIREDNLIPSKSKKSLTKSALTFRNMLLASIEDVGVLVV
                     KLCDRLHNMLTLDALREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNDQQMQLGLNEFISKIELLFLSNGFRQGSFQIQKRIKHSYSIYLKMQ
                     RKGVGIEEVLDLLGVRILVENVSDCYLALGVLHTNFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDTKNIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSTNN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRVKVPLLTELKNGDIVRVVTSNDRFYRCSWVDSVKTGKAKASIREFCKQKMR
                     EINLLSAINMLSFIFSVDKNKIENWIERENLGRRIRQVASDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFLLYSNHKIANVDFDYCCHPKRGDAVLAFIENGNAIVHHKLC
                     DRADKMIDNNKDMVLIKWDSNIPKSYKLIFSLENKKGILAEFLAVLAKMQINLLTISL
                     SSDINTVVDYFEITIEIPDNINPDNVRDRLKSYCKILDFTSLNDAYKEA"
     gene            complement(15018..15242)
                     /locus_tag="ACJE1S_000709"
     CDS             complement(15018..15242)
                     /locus_tag="ACJE1S_000709"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HGG0806275.1"
                     /translation="MENRIEEIAAKALERMGDDRYRLSLVVAKRAEQLADGAAPLVDI
                     DKSKLKFADIALYEIAENKITLEGLVETSR"
     gene            complement(15256..15972)
                     /gene="pyrH"
                     /locus_tag="ACJE1S_000710"
     CDS             complement(15256..15972)
                     /gene="pyrH"
                     /locus_tag="ACJE1S_000710"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HGG0806276.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIANEIKELVKNNI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESCGLDVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVIFAAGTGNPYFTTDTTAILRAVEIDAQMVIKA
                     TKVNGVYDKDPNKFDDAVFLQTLSYDEAMQDNIKVMDDTAIALAKDNSLPIVVCNMFE
                     EGNLLKIIQGDNSLCSIVKN"
     gene            complement(16024..17226)
                     /locus_tag="ACJE1S_000711"
     CDS             complement(16024..17226)
                     /locus_tag="ACJE1S_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HGG0806277.1"
                     /translation="MRKILIFLCFFLLSNEMHANAISEKTKNLEENKRIQEQVNKKLE
                     DLANDILSGEKSLKELSAQIETLNSQTLKLEARAKAQNKDLNLLTSQNTDLLKNKANM
                     EGKLIALMAKDFAYDLPIPQGYVESKESFMAFEVLGGLDKILQDEIFKLSKDYEDISK
                     LIDDKQEQIKKINEDLKDYNTQLAKLQNLRQKQVSEIKKQKTDRAIYAKKLENLQDQQ
                     DELRKTLNQLKIIESKQEDKKQSQKTASDSKIVNNTQKIRQIGSSYQGSSTKRYTGKK
                     TIAPLESFTVKQKFGNYIDPVYNIKIFNENVVLRSNKADAVVKSVLDGKIVFAKDTSM
                     LARVVIVEHDNGIHTIYAHLDKIAPNIKVGKNVKKGAVVGRIKNDLTFEVTQKNFHIN
                     PLELISLN"
     gene            complement(17223..18029)
                     /locus_tag="ACJE1S_000712"
     CDS             complement(17223..18029)
                     /locus_tag="ACJE1S_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806278.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILLTNATLRHYEELVNKDYNI
                     IVASSAELDKNVIKTKLSSFSSLEPLDPKDLIDRLKNDISDKNLKVLRDSLPKFYSIK
                     LDYLPTQNELNTIKNQLLSIPSISKVETFAKTHDKVYSLLVLMKFVFWLFLFIIILLS
                     FVLFLKQMRIWLFEHTERVEIMCLFGAPFWFRSFMLYKIVVLDCFIAFIILFVFFTQI
                     YNLSIVQDSLKAVDIILPPINFIVHLGVIFLVTLFICLFCVNSVMFRVKK"
     gene            complement(18016..18681)
                     /locus_tag="ACJE1S_000713"
     CDS             complement(18016..18681)
                     /locus_tag="ACJE1S_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HGG0806279.1"
                     /translation="MSNLIQAHKLSLGYDELVIKEASFTFKDDDFVFITGKSGSGKST
                     LLKSFYGDLELLSGQLEVCGSFMRKIGNSELLKLRQQIGIIFQDYRLIQEYSVEKNVM
                     LPLMIKGYSKKVCHDQASKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVVVVTHRIPSNLRLNYRRFNIENGNMN
                     EIF"
     gene            complement(18730..19926)
                     /gene="trmB"
                     /locus_tag="ACJE1S_000714"
     CDS             complement(18730..19926)
                     /gene="trmB"
                     /locus_tag="ACJE1S_000714"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HGG0806280.1"
                     /translation="MPNFKTRKLKEIILPFEKDGVEFVWMAYNDNVNLIYTRVEEESF
                     FLQIKKGENEFVVKVDKHTKPSKIAYLHKALYIFKQYFCEDVISEAFGIKNNALAEKT
                     PLIANDFEEVLERLEGKIYIEIGFGSGRHLLYQAKNNPQILILGIEIYNPAITQVAKL
                     ARAQGIDNILLVQSDARLLLSVLRSDSIEKIFLHFPVPWDKKPHRRVVSKAFCKECAR
                     VLTTQGVFELRTDSYEYFDFTFKEFLEFSSPQFSIRKNENLEISSKYEDRWKRQEKDI
                     YDLWVWNLDKEEKNVLSEEFDFSDIHLSKNDLMLLEKNFENFTLKKEDFFLHFENIYK
                     QGESLLLKIAFGAFNKPEHCYLHIGEAISFVFKEPFKIQENLKAIKELKKSVKFHFNM
                     KHFLEN"
     gene            complement(19926..21158)
                     /locus_tag="ACJE1S_000715"
     CDS             complement(19926..21158)
                     /locus_tag="ACJE1S_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HGG0806281.1"
                     /translation="MKKFHLSLCLGALTLLFSACSVSQLSNIGSNKELLVNESLPKIN
                     NLKSLSDISNIAFEWDPLYDDNIKGFYLYRSNDANPEFKLVGTIKNKFQTHYVDAKLE
                     PNTKYYYMMRSFNDQGHISEDGKVIEVKTMPRLEAIPFAQAITNLPSRIKLIWRPHPD
                     PRVASYIIERAKADGQEFKKIAEVKNRLNAEFIDEDLKPEESFNYRIIAVGFDGVQSQ
                     PSSILNSTSKALPPQVEHLNASLDGANKVVLTWDAPKYKDFSYYKVYSTSSSFLPYTL
                     LAKTEQNSYEDIVEGAAKSKYYKVTMVDIDELESPMPKDGVEGKTLGIPSSPSIILAQ
                     STSDGIDLEWVDNDSRAVEYEVRRYGGDQNAIFKGVKEKRLKDIKALPGVEYSYEVIA
                     IDSVGLRSEPSKKVKAKQ"
     gene            complement(21106..22071)
                     /locus_tag="ACJE1S_000716"
     CDS             complement(21106..22071)
                     /locus_tag="ACJE1S_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG0806282.1"
                     /translation="MQTFLVDEPSRLDIFLAKNLQQSRNQIASMIEKNCVWVNDKIQN
                     KNSFKLKVGDKLVLNLPLVEEAKPKFDIDFDIEILYEDEDLLVLNKPSNLVVHGAKSV
                     KSATLVDWLIEKQYTLSTLGGEVRAGLVHRLDKETSGAILIAKNNFTHQKLSEQLSDK
                     TMGRIYLALIDLPLKEDKIIIDKALIRSSANAIKKIVTNSFVKGSKEAKSAFVNLAKS
                     EEVSLIGAKLFTGRTHQIRAHLASINRHILGDELYGYRGKYECRIMLHAYFLYFIHPR
                     NGEKIFIQAPLMDDFKQILEKKFILGELNEKISLESLLGCFDSFI"
     gene            22150..23250
                     /locus_tag="ACJE1S_000717"
     CDS             22150..23250
                     /locus_tag="ACJE1S_000717"
                     /EC_number="2.4.99.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008955 - peptidoglycan
                     glycosyltransferase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HGG0806283.1"
                     /translation="MFIPDRRILTHFDYMQPILFVPIILISFFLIFEANAFLAEKQFV
                     YACVGIAAFSVFFLLPIRKLMWLIPIAYWVNIFLLLSTDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQDPPPKNGYKLKQFLKLSFFIILPFLLIAQEPDLGS
                     AMVLLIVGFGVLFIMGVHYKIWLSIIIAIGISSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLIGKSQDEATQTHFNFLPISTSDFIFAYLIERFGFLGGFVLILL
                     YTLLIFHLLSLNQKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWVDNKNK"
     gene            23301..23377
                     /locus_tag="ACJE1S_000718"
     tRNA            23301..23377
                     /locus_tag="ACJE1S_000718"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23335..23337,aa:Ile,seq:cat)
     gene            23598..24797
                     /locus_tag="ACJE1S_000719"
     CDS             23598..24797
                     /locus_tag="ACJE1S_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG0806284.1"
                     /translation="MIIVNDKQLKTLIVKKRTYIKDACTKNLYIEAKDSLKGTIIFFY
                     FRYRLNKKIQSIKIGKYPTTTLSSAREKANIFNDMLAQKIDPKEQIQDKGVKKSKTVK
                     EIFHEWSQVFYKNNTSYNLSKRLETHIISKYEDKHINELAKNDILLVLDKLYVEGKLE
                     TIKRVFLGLKKMLMYAINKEYIENSNILTLDMKALYGSPKKQNLRAITKEERFKELLL
                     AIENYNGSIFTKVALQISPYLFLRSTNIRNLEWSEIDFKNLKIIIPANKMKGGEDFII
                     PLSESVIKLFEFIKPFSFHNSKYVFPSDISKSKTMSENTLNQAIKRLGFGDEMVFHGF
                     RTTASTLLYEFKNLHGQDSEVIELCLDHRERNNVKATYNRSLRLNDRKLLMQYWSDYI
                     DKLKGII"
BASE COUNT         8151 a         4641 c         3418 g         8608 t
ORIGIN      
        1 ataaaggata acaaaatgat taatgtgttg atgatagaag atgatcctga ttttgcccaa
       61 ttattgtcag aatatttaac tcagtttaat atcaaaatca caaattttga aaatcctaaa
      121 gaagctttaa atgtaggtat acaaggctat gattgtttaa ttttagattt aaccttacct
      181 ggaattgatg gccttgaagt ttgtagagaa atcagacaaa aatacaatat tcctatcatc
      241 atttcatctg ctagaggaga tttaagcgat aaggttgtag ggctccaaat tggcgcggat
      301 gattatttac caaaacctta cgatccaaaa gaaatgcacg caagaatcat gagtcttatt
      361 cgtcgcacaa aaagagctga aaataccaac aatgaaaata tcaattcagc ttttaaaatc
      421 gatgaaagaa aacacgaaat cacttatcaa aacaaagtct taactctaac ccctgcggaa
      481 tatgaaattt tagaatatct catccagcaa cacggctata gtgtatctag agaacagctt
      541 gtaagtcgct gtaaaaatct taaagataaa gattctaaaa gccttgatgt tatcatcggt
      601 cgcttaagaa ctaagataaa tgatagctct aaagctccaa aacatatatt ttcagttaga
      661 ggtataggat ataaacttat aggatgacta gaaattattc tatttatacc aaacttgtta
      721 ttttatttgt tgtaactttc tttttggttt gcgttttatt tatcgtgctt ttaaaaatag
      781 aaagcaatac ctacagcgaa gaagaaggtt ttaaacaaga aagttttata aaaaatatca
      841 tcaattctta tggcaatgct tctggagtgg atataggagc tcatcttaac aatagcggct
      901 ttgttgctat acaaaatgat tattttgtaa aaatcgcaag actagaagga caaagccttt
      961 ttcgcgcagg aaatggagaa aatgcctgca ctctcacctc tttaaaatat caaaacaaac
     1021 tctatcttga tgtccaatgc aaagacttta gcgctttatt tgaagaagat actaacaata
     1081 gagtttataa tcttttgttg ataggctttt tctttttttc ttttttggtt gtttttatgt
     1141 atttttcagt attaaaatcc cttgaaccac ttaaaaaatt aagaaaacag gtcgcagaag
     1201 tggctaatgg cggaaaagct gattttgaga attatcaaga agatgaagta ggtaaaatag
     1261 cccttgaatt tcaaaaagct tttaagaaaa atcaagaact catacaatca agacaacttt
     1321 ttctacgcac catcatgcat gagcttaaaa cgcctattgg aaaaggtagg attatatctg
     1381 aaatgctgca agaagaaaag cagaaagaaa gattgatcga tattttttta agaatggatt
     1441 cgttgattaa tgaatttgcc aaaattgaaa atcttttttc aaaaaactac aatcttcagt
     1501 ttaaacctgt gcattttagc accatactca atgaagctaa agattatttg atgcgtgatg
     1561 attttaatag agtcgtcaag ctcaatttaa aacacgatgc cttgattaat gtagatatgg
     1621 aaatttttcc tttgatttta aaaaatctca ttgataatgc tttaaaatat tctagcaatg
     1681 gaacttgtga gctttattgc tgtaaagaat gttttgtgat aaaaaatcct ggcaatccat
     1741 taagagaacc tatagagcat tattttgagg cttttacacg cgaaccatat cagaaagtca
     1801 aaggtatggg cttaggactt tatatcgttt ttgaagtatg caaactacat aattttgata
     1861 ttatttattt ttacgaagaa ggtaagcatt gttttaaaat ttttttcgga gtaaaaacaa
     1921 acaatgacgc ataagggtat agaaaaattt aacgaacttg tagaaagttt tgcaaaatta
     1981 cccactatcg gtaaaaaaac tgctattcgc cttgcttatc atatttgcac aggaaatcaa
     2041 ctcgaaggta tgaagctcgc acacaatata gaaaatgcta tacgctttat aaaaccctgt
     2101 caacaatgcg ggtctttaag cgaaaacgaa ctttgtgaaa tttgcaccga tgatgaaagg
     2161 gataaaaatt gcttatgtat agtgcaaagc ccgaaagatg ttttggttat agaagagagt
     2221 aaaagttatg ggggcttgta ttttgtttta gatgaattaa acgatgaaaa gcttgctcaa
     2281 ttaagacaaa tgatactaaa attacaaagc aaagaactca tttttgcttt cactcataat
     2341 ttaaattccg atgcaatgat tttttatata gaagataggc ttaaagattt aaatttacaa
     2401 tttagcaaaa tcgcacaagg tattccaagt ggagtaaatt tagaaaatgt tgactttata
     2461 tctctaaaca aagccatcaa ttttcgcacc aaagtttaaa tcagtttttg taagaaatgt
     2521 cagctaattc ctgcaaagaa tgatttgcta ttttttcata actaaaaccc tctttagtta
     2581 aatactcaag caaagttttt tccataattt cacccgcgct aacaatctct tgcgatagag
     2641 taaaactcat aggcttgata cgctttggaa cacaagctaa aatttgtgta tgaggcaaat
     2701 ctcccattag ctccatatat tgtaaggttt gaagcatttc tacttcgtgt gcactaccac
     2761 tccaattgat ctttttaggc attgcatcat aaggaaagaa aaatacatcg ccgatttttg
     2821 aatcatctgc atctatacaa tcaagtacta tcatcttatc atactctgcg ataatatagc
     2881 taagttgcaa ggccaaggtg cctccatcga caaaatctaa gctgtgattt gaatgagtga
     2941 atttataatt tttttctaaa agtttgcaaa gatgaacgcc tatgccttca tctgcaaaca
     3001 taatatttcc tataccaagg acaagaaatt tcaatttttc tcttctttaa caaatttata
     3061 accgctaact atagcatcaa tcgcaccatc tttacctttg atcgcattga aaaatgccat
     3121 gtagatatga acgggtacaa agattaaaat aacccacatt aaaattctat gataagttct
     3181 aacatcagcc aagcctccaa gtgcggcttc taaaggtctt aacacttcat acaacaatcc
     3241 tcccaaaccc tcatggtaag tatgagtata aagaatcaat cctgttaaaa taatccccac
     3301 cataacaata tagaaaaata tataggttac aaactgcaaa ggattataaa caccttttag
     3361 atgtggatgc ttacctaaaa atagataaaa tttaatctgc tctatccata attttggatt
     3421 aagtgcatct actatgctga tacgctcctt gcgacttatc ctatcaaaaa agaaaagata
     3481 aactttaaaa atcacacaag caatcaaaac aaaaccgacg gcttgatgca ccattctgta
     3541 ttttgcttgc atgaaattaa ctggctcacc attgcttata ggattttgaa aaacataaga
     3601 aagataatat cctgttataa ccaaaaccac tatagcaaaa gctcttaccc aatgtgttaa
     3661 acgcaaacct atgctaaatt catattcagc ctttctttgc aatttttctt ctttattttg
     3721 cataaaagcc ccttttataa actcgcgttt actttatatt cgcttagatt atttccctta
     3781 gtatccatta catgcaccgc acaagcaata caaggatcat aagagtgaat ttttctaatg
     3841 atttcaagtg gttgttttac atcagcaatt tttaatccta tcaaacattg ctcatagctt
     3901 ccgcccacac cattagcatc ttttggactt gcattccaag tagaaggaac aactgcttgc
     3961 caattttcta tcactccatt tttaatcctg caccaatgac ttagcgttcc gcgtggcaca
     4021 tgccccatat agcgtccttt gtactcttta gaattatcga tcacataagg cgcacaagtg
     4081 ctctcatcta cttttaaatt ttctactaaa ttacggaagg cttttaaagc attattagcc
     4141 acaatttttg cttccaaaca acgcgcagca gttcttccaa gagtgctaaa tacagcattt
     4201 aaaggaagtc ctgtttcttt taaaaactca tctaccacag gaacaacatt ttgattaccc
     4261 ttagcataat ttacaacgat attagccaaa ggtcctactt gcataggatt tccttcatag
     4321 cgtggagcct taatccagct atatttaccc ttagtatcaa ataccttaga atgcactgta
     4381 tttccatgat gatctacact ttcaccctct acaagccctg tataatttgg atttgtttta
     4441 ccctcataag gatgcaaagg ctcattatct gcataccaag aatgggtcgc ttcttcagtg
     4501 atcttatctt cttctacttc atataccttg cttaaatcgc catttttgat gattccgctt
     4561 tcaaatagcc actcatctct accaagctgg aattcttgga aagtgtaaag attgtttacc
     4621 ccaatatcat ttagtacact aggttcatct gcataagctt ttcccgccat aacaagatca
     4681 ggataatacg cacgattaac aaagtcttgc acttctttga atttttccat atattcaccc
     4741 attctagcag ggcttagcaa atccataacg caagttacac caccaacggt taagctttgt
     4801 ggatgtggat ttttagcacc aaaaatagcc atacattgag ctatgattct ttgaattctt
     4861 aaacactcta aataatgcga taaaacgatc aaattttgct ctggagttaa gcgataagta
     4921 ggatgaccat aataagcatt tgcaaaaggt cctaaatttc ctttatctac aaaagtttta
     4981 agtctttgtt gcacttcaag aagtttatct gcacctgttg cataaggatt tgaagtgtat
     5041 ttaaaagcct catcacttgc ttttttaaca tcagcactta aagcacttac aacatctgcc
     5101 caatcaagcc catggagttg ataaaaatgt acgatatgat cgtgtaagaa aagcgctgca
     5161 ttcattaaag ttcttgttaa aagcgcattt aaaggcggag taatacctaa agcattttca
     5221 acagcaacta tacctgcttt ataatgtgaa aaagtacaaa ctccgcaaat tctttgcgtc
     5281 ataaaacccg catctcttgg gtcacgccct ttaacaatgg tttcaatacc acgccacaaa
     5341 gtagagcccg cataagcttc ttttaccaca ttgttatcat caacaacaac ttcaaccctt
     5401 aagtgtcctt ctattcttgt aattggatct actattatct tttgactcat gtattttatt
     5461 cctcattctt tttcatggat gcgatcaccg catgcgctgc gatagcaacg cctgtaagcg
     5521 ttagaacacc tatgcctatt ttatctgata cattatcagc tcctaatcca aaaacagtat
     5581 caaatttacg acttgccata ggctcttcaa aaggtcccat agtatcccaa aaatttggct
     5641 cagaacaacc tatacagcca tgtcctgctt ggataggcca agaagtgtgt tggttaaatc
     5701 tttctctaga gcagttatta aaagtataag gacctttaca acctacttta taaagacaat
     5761 aaccattttt tgcaccctca tcgccaaagt tttgtacaaa ttcacccgca tcaaaatgtc
     5821 cgcgtctttc acaaagatca tgaattctta aaccataagc ccattttggt ctattataaa
     5881 catcaagcgc aggtaactca ccaaaaagaa gataatgtaa aacatttcct actatgtttt
     5941 tttcacttgg cggacaacct ggcacgttga taacggtttt gcttgttacc ttgcttagag
     6001 gttgagcatt gcttggattt ggtcttgcag cttgaattcc gccaaagctc gaacaggttc
     6061 ctatcgcaaa aatcgccaaa gcattttcac tcgctacttt agaaagctca tatccactct
     6121 ttccatgtgg ccctatggtt aaaaaattct ctgtatctcc catagggata ccaccttcaa
     6181 ccattaaaat atacttgttt ttatattttt caatggcact ttctaaattt tcttcagcct
     6241 gccaacccgc tgcagccata acggtttcat ggtattctaa agaaatataa tcaaatatta
     6301 agctatcaat agttggagta tcacttctta ataaactctc gctacagccc gtacattcag
     6361 ccatatgaag ccaaatcaca ggaagtctat ctgcaagttc tgcagctttt gccaccatag
     6421 gggtaaaact cgctggcaat gctaaaaatg ctgtcatcgc ccctgcccat ttcataaaat
     6481 ctcttctagt aaagccagat ctttccaaag cttttggtat agaattttca ggatttaaag
     6541 aaggaagttt ctcaagtgcg cttaaacggg actctatttg attataatca atcattgaaa
     6601 ttccttaatt aatgtaattt attccactta ataataaaac aaagcaaatt aaaaatgtat
     6661 taaaatttaa atttcaatag aaaaatataa acaaaactta aagatatatt aataaaagct
     6721 aaaaaattta tatccctttc tttagcttgc ggatcaaaaa tcttgcagga tgtatacaag
     6781 gaataaaatt tttaaacacc cccaaaggct cctcgttaat caaagcacaa agatatcttg
     6841 cagccaaaac agaagtgcta aaagctcttg agccatgagc aagattaaga tataaattag
     6901 ggatattttg aggcagaact tgcgccttgt tttttgtcca taataaagct ttatattctt
     6961 gcttataaaa agcttcatca taagctgctc ccacaatagc aaacctatcg ctagaataag
     7021 atctaaaacc tactctagag cctttgatga tgatttcctc atcgcctttt aaaaactctt
     7081 gtatgttttg caaattttct tcatcatcgg ctttttgtgg atttggattt gaattcagcc
     7141 tatcataact tgcgccaata acttgcaaat ccccatcgct aggacaaata taagcttttg
     7201 aagaaagggc aaatgcatta tccaaaaaag gttttagatg agtaacctgt cctctaacct
     7261 tacttaaaag cattccatca taaactaaaa aatccttagt atcagcaccc atagcataga
     7321 ttaaaatatc aaaatcttgc attgcttttt ggtttttaaa atgcaaaata aatttgtctt
     7381 cttggtattg aaaaaaatca tattcgtgat taaaatacat ttttgcttga cttttttcaa
     7441 aaagagattt taaaatttct ttaggcttaa tgtgtccgcc atcttctaaa aaagcttcat
     7501 tcttatcaat cttaaataaa atattatctt tttggcttat aaaacgctct tgcatcaaag
     7561 gagtatgagc aaattctatc actcctttta gatttaaatc taaaatttgc ttataaaaac
     7621 gactcgcctc gataaaagca agttgagaaa attcacccaa agcaacatca ggctttaaaa
     7681 tcaaagagct taaaattcca ctttcattgc cacttgcgcc acatcctaaa ctatcgtttt
     7741 tttcaaaaac actgacttca aaatcacgca aagaaagctc ataagctaaa gttgcaccac
     7801 atatgcccga acctatgatg gctacttttt tatttttata taaacttgga attctttgaa
     7861 aataagcttc tttatctagg gttggatatt ctttgcgtaa aaaagctttg atcatctctc
     7921 gctttctaaa acctttggtt ttttggattt caaagccata ttttataaga tttttttgca
     7981 aagcactcga agcagaaaag gtgcaaattt gggtattagt ctttgaaagt cgagcaactt
     8041 gagctatgaa attttcatca aacatggctg aatttttact cggagaaaaa ccatctaaaa
     8101 accaaacatc agcattaaaa tcaagctctc taagaatagc aatatcatca aagattaaat
     8161 ccaaaaaaca atctttaaaa taaaaacgat aatacccttt tttagcctta ggataaaact
     8221 ttaaaaaagc ttctaaaatt tctttaaatt cttcataaaa tccaagcttt tgataaattt
     8281 ctctaagctt gtctttttca atataaaaac cctcaatgct ggtgtaaaat aattttttag
     8341 gacgcttctt tgcttgaaga aatcttttaa gggttaaaaa gaaattaagc cctataccaa
     8401 agccactttc agcaatgata aatgtatcat tttcttcaaa ttcaaaagcc tcactataaa
     8461 caaatttgct ctcatttaaa ccatcttttg agttaaaata aaaatcatca aaatccaaag
     8521 aaaatggggt attgtcttta aagattaaat tagctttttt catctattgt tataaaaata
     8581 attctccaca ccatcagcta tacccttaac caaagtgtct tgaaaacttt tatttgcgat
     8641 tctttttccc tcacttggat gagtgatata tccaatttct atcaaaatag caggcatttg
     8701 agctccaaca agaacccaaa aaggagcttc tcttactcca ccatcgacaa ttttatactt
     8761 cttacgagtt tgggttaaga tatttttttg cacatctata gcaagtttgt ttgaagccac
     8821 gatcttttct ctgtttaaaa aattcaaaat actttgcttt gaaaaataat taatctcttc
     8881 aaaatcaccc tgattttctt tttcagcagc ttttttactt ctttcacttc tagcaggact
     8941 taagaaaaaa gtctccacac cctcactgct ttttgctttt gatgcactag gcgctgcatt
     9001 tgcatggata gataaaaaca aatccgctct tttatcattg gcatattttg ttctatctct
     9061 aagattgata aatttatctg aacttcttgt ataaagtact ttataaccgc gttttttaag
     9121 ctcatttcca agctttaagg tcgtgcttaa aactatatct ttttctttta aactcccttt
     9181 tttatcgctt aaagcaccac tatccttacc cccatgtcct gcatctaaga ctatgagttt
     9241 atcagattta aaattagaat ttaaaacatt tttactagca gtttttgaag tgcttttgct
     9301 tgaagtagaa gtgcttttgc ttgtactgcc actaaaacct aaagtcaaac ttttatcatc
     9361 taaatcttta aaaagcttaa attctttagt tgagctgagt acaatacgaa ctgtttttgg
     9421 attatactga gtaactgtaa cagcattttg cccaaaagta aaattcttgc gactaccttc
     9481 taaaattcct tgaaagctca ctacttgtct aaagaatttt tgatcttttg tgctaaaact
     9541 tgtaatatct ttttcatcaa gctcatcgct taaatttaaa acaacagaat tagaactttt
     9601 atctacatct aaaacatata aaggttcatc attttcttgt tcttttttgg tatttgtttt
     9661 agcttcttga gttttaactg gtttggactc ttgttttgcg actacttttt cactttcttg
     9721 ttttgctgct gtttttgact cttgcttact cggagtactt ttttgtatag cttgtgattt
     9781 tttagaaata cttatttttt catcttcaaa atcaaagttt agaggaattt tttccttagc
     9841 ataagcaacg atacgaatca tcttaggatt gtattgtgaa attactatgc gataatcatc
     9901 aaatttatat tcttttcttc cgccttctaa aataccctca aaatcactga tataacgata
     9961 atttcctttt tcatccaagg caaaactttt tatatctttt tgctctaaat tggtatttaa
    10021 atcaagtacc actccttgac ttgtcttact tgattttaaa acataaacct tatctacttt
    10081 ttttgtctgt tggggtttat tgttttgtgt ttttgtgctt tcttgtttgg tttgtggggg
    10141 ttttgaagta cttttaggag gttcaaagct tgaaacctcg acatttttag aatcaggctg
    10201 aactttttgc ttatccttaa tcaccgcttt tcttaaagca ttgatgctag ccttactcac
    10261 tccgctttct tctaattcgt tcgcataaga tttatcatcc aaatttaaag cattagaact
    10321 tataatcaat ctttttaaaa tttcaatttt agttttttca tcttcattga tcacactttg
    10381 tatataaaga ctttttagct gatgatggaa cttaacttga gcatcatttt ttgacgcgat
    10441 aaaattctta tcaaaattag caagctcatt ttcatatgcc ccaaaacaaa tactaaaaag
    10501 tgcgatacaa aaaactaaaa ttctaaacat tattcaccat tgacgagttt atccataagc
    10561 tctttaacac tgattaattt ttctaaacga tagccattgg ctcctgtaaa gaataatcct
    10621 gtttcttttt ttcccgacca tgcatcaaaa agcctatctg ctatacaata acccaccttt
    10681 gtcgcctctt tgcctcggcc acatggcgct acacaattgc tgatacaatt gatctttggt
    10741 cccattcttt tatcgactaa atcaagtaaa ttagtcctta ctccccttgc aggatatccc
    10801 actggagatt tgataagttc tatatcttct tttttacatg caagcaatac atttttaaac
    10861 tcatcacttg catcgcattc aaaagtacct ataaaacgag ttcccatttg aaccccgcta
    10921 gcacctaaag aaatggcatt ttctatatct tttttatccc aaattccacc cgctgcaatc
    10981 actggaaaag aaccccaatt tttagcctct tcaaccacag gtgcgattaa attctcaagt
    11041 tgataattag gatctaaaca ttgctcatag gtaaaacctt gatgtccgcc gctcttaggt
    11101 ccttcaagca caacagcatc aggcagacgg ttgtatctac tttgccatct tttacagatg
    11161 atttttaaag ccttaggtga agagattata ggaactaaag caacatcagg aaaatctgct
    11221 gtaaattcag gtaaattggt aggaagtcca gcacctgaaa ctataatatt aaaacccact
    11281 tcacaagcat cacgagcaat tcttgcataa tcattacttg cgcataaaat attacaaccc
    11341 aaaggcgcat caccgcaaac ttttcttgca ttatttatca aagtttgcaa gccttctcgt
    11401 gaataaaaat tttcactacc ataaggctta gcattcaatt ctttgctaat atgggtgcga
    11461 ttttcataat atcctgttcc aacagatgag atgataccaa gaccgccatt taatgacact
    11521 gctgaagcca atttatccca gcttatacca agccccattc caccttgaaa aatgggatat
    11581 tttatagtgt gttttcctat ttgaagggat tttaaactca tatattcacc tttaattttg
    11641 caaattttct cttacctact tgtaaaatat actcccctgt gccaagttgc atttgctcat
    11701 cgcttacttt ttgtgaattt acactcaccg catttgcatt aatgcttctt cttgctgcag
    11761 aggtagaatt ttccaaaccg cattctacta aagctttagc aagccaaatt tcaccctcta
    11821 tctcaaattc ttttatatcg cttggcaaag catttccgct atgtacgctg tcaaattcgg
    11881 cttttgcagc cttagcgctt tcttcattgt gaaaacgcgt agtaatctct agcgccaaat
    11941 tttccttagc aagcttagga tgtaaattgc cactagaaat ttcttttttc atattttcaa
    12001 tttcttctaa acttttagta cttaaaagct cataataacg ccacattaac tcatcactaa
    12061 tacttagaat tttagcatac atatcattag ctttttctgt aacgccgata taattcccta
    12121 agcttttact cattttattt acaccatcta agccttctaa aagaggcatc atcatcacag
    12181 cttgttcttt tccgatattg taaattcttt gcagggttct tcccattaag agattgaatt
    12241 tttgatctgt tccgcccatt tctatatcgc attttaaagc aacactatca tatccttgaa
    12301 gtaaaggata taaaaactca catatagaaa tagggctttg ctctttaaaa cgcttcgtaa
    12361 aatcatcacg ctctagcatt cttgctacac taaaggtcga agtaagctct actatcccag
    12421 tagctcctag ttcgttaagc cattgagaat tgaattttaa ttgtgtcttt tgcggatcta
    12481 aaatcttaaa tacctgctcc tcataagtct tagcattttg taatacttgt tccttatcaa
    12541 gttttttacg cgtaacgctt tttccactag gatcgccaat ttgtcctgta aaatcaccga
    12601 ttaaaaattg aactatagct ccgtgttttt gcaaatatgc cattttggtt aaaaccacac
    12661 tatgacctaa atgcaaatca ggtgctgtag gatcaaatcc tgcttttacg aaaaaatttt
    12721 ctcccttttc gtaataattt ttaatcaaat tttcaattct ttcctcatcg atgatttctg
    12781 cgcaccctcg tttgatttct gcaagtatat tttttatatc cattttctac cttttagttt
    12841 aagcttcttt ataagcgtca tttaatgaag taaaatctaa aattttacaa taagatttta
    12901 acctgtctcg gacattatca ggatttatat tgtcaggaat ttctatcgtg atctcaaaat
    12961 aatccaccac tgtattaata tcacttgaca aactaatcgt taataaatta atctgcattt
    13021 tagccaaaac tgccaaaaac tctgctaaaa ttcctttttt attttctaaa gaaaagatta
    13081 atttgtatga tttagggata ttagaatccc atttaatcaa aaccatgtct ttattattgt
    13141 ctatcatctt atctgcccta tcgcagagtt tatgatgaac tatagcattt ccattttcaa
    13201 taaatgcaag tacagcatcg cctctttttg gatgacagca gtaatcaaaa tccacattag
    13261 caattttatg attagaatac aataaaaaat tcccaatctt ttgttctttg atttcgtatt
    13321 tgtcaaacca ataagatttt ttagcgtatt ttttaagccc attgactata tctttcaaat
    13381 aagcactatc actggctact tgtcgtatgc gtctgcctaa attctctctt tcaatccaat
    13441 tttctatctt gtttttatct acactaaaaa taaaacttaa catattaatc gcgcttaaaa
    13501 gattgatttc tctcattttt tgcttacaaa attctcttat gctcgctttt gcttttcctg
    13561 tttttacact atcaacccaa gaacaacgat aaaacctatc attggaagtt acaaccctta
    13621 ctatatctcc atttttaagc tcggttaaaa gagggacttt tacacggtta acataagcac
    13681 tttttgcatg aagtcctact ttagtatgca cctcataagc aaaatcaagc acagtagctc
    13741 ctcttggcaa agtaaaaatt tcaccctttg gagaataaac agccacatct tctacataaa
    13801 gactatcttt tgcatactca taaagctcga tagcattata atcttctgcg ttttcaagat
    13861 tgttcgtact ttgcatcgaa atatcagtaa gccaatcaag tcgcggggct acaacactcc
    13921 catcttcttt gtatttccaa tgtgcagcta taccaaattc agcgatttta tgcatatcaa
    13981 aagtacgaat ttgtgcttcg ataatatttt ttgtatcaaa aagagtggta tgtatagttt
    14041 gatagccatt ttgttttggt aaagctatgt aatctttaaa acgcgaaacc aagggattaa
    14101 aatttgtatg caaaacccct aaagccaaat aacaatcgct cacattttca accaaaattc
    14161 gtacaccaag caaatcaagc acctcttcta tacccacacc ttttctttgc attttaagat
    14221 agatagaata actgtgtttg atgcgttttt gaatttgaaa acttccttgc ctaaagccat
    14281 tgctaagaaa taaaagctcg attttagaaa taaattcatt aagtcctagt tgcatttgct
    14341 ggtcgtttga attaatataa ttatcgataa gcttatactc atcaggcatc aaatacttaa
    14401 agcttaaatc ttctaaataa ttcttaatac tagaaattcc aagtctatgt gctatgggtg
    14461 cataaacgac caaagtttct tcgctaatac gcttttgctt atcttctctt aaagcatcta
    14521 aggttagcat attgtgaagt ctatcgcaaa gttttaccac caaaaccccg acatcttcaa
    14581 tacttgctaa aagcatattt ctaaatgtaa gagcggattt ggttaaactt ttttttgatt
    14641 ttgaaggaat gagattatct tctctgattt ctacaatctt tgtaagacct aaaacaagct
    14701 ttaaaacttc ggatccaaac tgatccctaa gttcttcttc ggtacattgc gtatcttcga
    14761 tcacatcatg taaaagcgca gccaaaattg tggctttgtt ttcacttaaa aaagcaacca
    14821 agcttgcaac caagatggga tgaactgcat aaggttctcc gctttttcta acctgacctt
    14881 cgtgggactt tatgcaataa tccacagctt tttctacaat agcatcctct tgacaaatgc
    14941 taaaaagaag ttcttttgct cttgttaaat ctctacaatt tttaatatct tcaatgagtt
    15001 tttcgagcaa taattcctca tcgactggtt tcaactagac cctctaaagt gattttattt
    15061 tctgctatct catataaagc aatatctgca aattttaatt tacttttatc aatatccact
    15121 aaaggtgctg caccatcggc taattgttct gctctttttg caacaaccaa agaaagacgg
    15181 tagcgatcat ctcccattct ttctagagct ttagctgcta tttcttcgat tctgttttcc
    15241 attagttctc cttgattaat ttttaactat agaacaaaga ctgttatcgc cttgtataat
    15301 tttaagcaaa tttccttctt caaacatatt acatacaact ataggcaaag aattatcctt
    15361 agctagagcg attgcagtat catccataac tttaatatta tcttgcattg cctcatcata
    15421 gcttagggtt tgtaaaaata ctgcatcatc gaatttatta ggatctttat cataaactcc
    15481 gtttactttt gttgctttaa taaccatttg tgcatcaatc tcaaccgctc ttaagatagc
    15541 tgttgtatcg gttgtaaaat aaggatttcc cgttcctgcg gcaaagatta caaccctacc
    15601 tttttctaaa tgtctttgag ctcttctcat aatataagtt tcacaaaaag cttccatttg
    15661 aatcgcactt tgtactctca catcaagtcc gcaactttct aaagcctctt gaatagcaat
    15721 agcattaata acagtcgcaa gcattcccat gtgatcgccg cttgtgcgtt tgataagacc
    15781 gcctttggct gctgaaacac cgcgaatgat atttccaccc cctatcacta tgcctacttc
    15841 tatattgttt ttaaccagtt ctttaatctc atttgctatg aattttaaaa tagaattttc
    15901 aataccaaaa ccattttctc cggctaaagc ttctcctgaa aattttacta aaactctttt
    15961 tctctcttgc attttttctc cttaatcaac ttgaaattat attgaaaatt gcattaaaat
    16021 tagctaattt aaactaataa gttctaaagg attgatatga aaattctttt gtgttacttc
    16081 aaaagttaaa tcatttttta tcctacccac taccgcacct ttttttacat ttttaccgac
    16141 tttgatatta ggtgctatct tatctaagtg tgcataaata gtatgaattc cattatcatg
    16201 ttcgactatc acaactcttg ctagcatact tgtatctttg gcaaaaacta tctttccatc
    16261 taaaacactt ttcactacag catcggcttt attgcttctt aaaacaacat tttcattgaa
    16321 aattttaata ttataaacag gatcgatata atttccaaat ttttgtttta cggtaaacga
    16381 ttctaaaggg gctatagttt ttttacctgt ataacgctta gtagagcttc cttggtagct
    16441 agatccaatt tggcgaattt tttgagtatt attgacaatt ttgctatcgc tggcagtttt
    16501 ttgactttgt tttttatcct cttgcttgct ttctataatt tttaattgat ttaaggtttt
    16561 tcttaattca tcttgctgat cttgcaaatt ctcaagtttt ttagcataaa ttgcccgatc
    16621 ggttttttgt tttttaatct cactgacttg cttttgtctt aaattttgaa gttttgctaa
    16681 ttgggtattg taatctttta aatcttcatt aattttttta atttgttctt gcttatcatc
    16741 gattaatttg cttatatctt cataatcctt agaaagttta aaaatttcat cttgcaaaat
    16801 tttatccaag ccacccaaaa cctcaaaagc cataaaactt tccttgcttt caacataacc
    16861 ttgcggtata ggcaaatcat aggcaaaatc cttagccatc aaggctataa gtttgccttc
    16921 catattggct ttatttttca aaagatctgt gttttgactt gtgagtaaat ttaagtcttt
    16981 attttgtgcc ttggctcgag cttcaagctt gagagtttga gaattaagag tttcaatttg
    17041 agcacttaac tctttcaagc tcttttctcc acttaatata tcattggcta aatcttcaag
    17101 ctttttattt acctgctctt gaatgcgttt attttcttct aaattcttag ttttttcact
    17161 aatggcatta gcatgcattt cattggacaa taaaaaaaaa caaagaaaaa ttagaatttt
    17221 tctcattttt tcaccctaaa catcaccgaa tttacacaga ataaacatat aaacaaagtc
    17281 actaaaaaaa tcacgcccaa atgcacgata aaattaatag gaggcaagat aatatcaacc
    17341 gcttttaggc tatcttggac tatagaaaga ttataaattt gtgtaaaaaa tacaaataaa
    17401 ataataaaag caataaaaca atccaaaacc acaatcttat atagcataaa agatctaaac
    17461 caaaaaggcg caccaaacaa acacataatc tctacgcgtt cagtgtgttc aaaaagccaa
    17521 attctcattt gttttaaaaa caaaacaaaa gaaagcaaga taatgataaa taaaaacaac
    17581 caaaatacaa atttcatcaa aacaagcaaa gaataaacct tatcatgcgt tttagcaaaa
    17641 gtctcgacct tactaatact tggtatgctt aaaagctggt ttttaatggt attaagctca
    17701 ttttgtgtag gcaaataatc aagcttgatg ctataaaatt taggtaaaga atctcgtaaa
    17761 acttttaaat ttttatcaga aatatcgttt tttaaacgat ctatcaaatc tttaggatct
    17821 aatggctcca aactagaaaa ggaagaaagt ttggttttga taacattctt atcaagctca
    17881 gcagagcttg caacgatgat attatagtcc ttattgacaa gctcttcata atgtcttaaa
    17941 gtagcatttg taagtaaaat aaactcaaaa gcaaacatca taaaaagcaa aggcaaaatc
    18001 aaagataagt gggttttaaa aaatttcatt catatttcca ttttctatat taaaacgacg
    18061 ataattcagt cttaaattgc tcggaattct atgcgtaacc actacaacac aagtacctaa
    18121 aagctctcta gctgatttta aaagtgtcca aatgatatct gaagaatact catctaaatt
    18181 tcctgtaggc tcatcgcaaa gcaaaagctt aggattgtgt gctaaagctc tagccatagc
    18241 tactctttgt tgctctcctc cgcttagttg attgggcaat ttatccgctt taaatgtcaa
    18301 atttacatgc tttaaaagct tacttgcttg atcatgacaa acttttttac tataaccttt
    18361 aatcataaga ggaagcatca catttttttc tacgctgtat tcttgtataa gtctataatc
    18421 ttgaaaaata ataccaattt gctgacgcaa ttttaaaagc tctgaatttc caatctttcg
    18481 catgaaagat ccacatactt caagctgccc tgaaaggagt tctaagtccc cgtaaaaaga
    18541 ttttaaaaga gtgctttttc cacttccact tttacctgta ataaaaacaa aatcatcatc
    18601 tttaaaagtg aaactggctt ctttaataac caattcatca taacctaaag aaagtttatg
    18661 cgcttgaatt aaatttgaca tcccatcctc tttgaatttc aaaattcgta aattatgctt
    18721 tatttttgct taattttcaa gaaaatgttt catattaaag tgaaatttaa cacttttctt
    18781 aagctctttt atagctttta aattttcttg tatcttaaaa ggctctttaa aaacaaaact
    18841 aatcgcctct cctatatgta aataacaatg ctcaggctta ttaaaagcac caaaagctat
    18901 ttttaataat aaactttccc cttgcttata aatattttca aaatgcaaaa agaaatcctc
    18961 tttttttaaa gtaaaatttt caaaattttt ctctaaaagc atcagatcat ttttacttaa
    19021 atgtatatct gaaaaatcaa attcttctga taaaacattc ttttcttctt tatctaaatt
    19081 ccacacccaa agatcataaa tatctttttc ttgtcttttc catctatctt cgtatttgct
    19141 agaaatttct aaattttcat tttttctaat gctaaattgc ggtgatgaga attctaaaaa
    19201 ttccttaaaa gtaaagtcaa aatactcata actatccgtt ctaagctcaa aaaccccttg
    19261 ggttgtaagc actcttgcac attctttgca aaatgcttta gaaacaacac ggcgatgagg
    19321 ctttttatcc caaggaactg ggaaatgtag gaaaattttt tctatagaat cagaccgaag
    19381 aacactcaac aaaagtctag catcactttg aactaataag atattatcaa taccttgagc
    19441 gcgtgcaagc ttggctacct gcgtgatggc tggattataa atttctatcc caaggattaa
    19501 aatttgaggg ttgtttttag cttggtaaag caaatgtctt cctgaaccaa aaccaatttc
    19561 gatgtaaatt tttccctcaa gtctttctaa aacttcttca aaatcattag caatcaaagg
    19621 agttttttcg gctaaagcat tattttttat accaaaagcc tcgctgataa catcctcgca
    19681 aaaatattgc ttaaaaatat ataaagcctt atgtaaatag gctattttag aaggtttggt
    19741 atgcttatct accttaacta caaattcatt ttctcctttt ttaatttgta gaaaaaagct
    19801 ttcttcctcg acccttgtgt agattaaatt cacattatca ttatatgcca tccacacaaa
    19861 ttctacccca tctttttcaa agggtagaat gatttcttta agttttctag ttttaaaatt
    19921 tggcactatt gcttcgcctt aactttcttt gaaggctctg aacgaagacc aacagaatca
    19981 atcgctatca cttcatagct atattctaca cccggtaaag ctttaatatc ttttaatctt
    20041 ttttctttta cacccttaaa aatagcattt tgatcaccgc catagcgtct aacttcgtat
    20101 tcaaccgctc ttgagtcatt atccacccat tctaaatcaa taccatcact cgtactttga
    20161 gccagaataa tactaggaga agatggaatt cctaaagttt taccctctac cccatcttta
    20221 ggcataggac tttcaagctc gtctatatct accatggtta ctttatagta tttactcttt
    20281 gcagcacctt caactatatc ttcataagaa ttttgctcgg ttttagccaa aagagtgtaa
    20341 ggaagaaaac ttgaacttgt agaataaact ttataatacg aaaaatcttt gtatttagga
    20401 gcgtcccatg tcaaaactac tttattggct ccatctaagc tcgcatttaa atgctcaact
    20461 tgaggaggta aggccttgct tgtagaattt aaaatagaac ttggctggct ttgcacccca
    20521 tcaaatccaa cagcaataat tctataatta aaactctcct ccggttttaa atcctcatct
    20581 ataaattcag cattcaagcg atttttcacc tcggcaattt ttttaaattc ttgtccatct
    20641 gccttagctc tttctatgat ataagaagca actcttggat ctggatgtgg acgccaaatc
    20701 aatttaattc ggcttggtag attggtgata gcttgtgcaa aaggaatagc ctctaatctt
    20761 ggcatagttt ttacttcaat cacctttcca tcttctgaaa tatgaccttg atcattaaaa
    20821 cttctcatca tatagtaata ttttgtattt ggctcaagct tagcatctac ataatgggtt
    20881 tgaaatttat ttttaatcgt tcctacaagt ttaaattcag gatttgcatc atttgagcga
    20941 tataaataaa atcctttgat attatcatca tataaaggat cccattcaaa cgctatattg
    21001 ctaatatcac taagactttt aagattgtta atctttggca agctttcatt gactaaaagt
    21061 tctttatttg aacctatatt agaaagttgc gaaacactgc aagcactaaa taaaagagtc
    21121 aaagcaccca agcaaagact caagtgaaat tttttcatta agctctccta aaataaattt
    21181 tttttctaaa atttgtttaa aatcgtccat taatggagct tggataaata ttttttctcc
    21241 atttctagga tgaatgaaat acaaaaaata cgcatgcagc ataatcctac actcgtattt
    21301 ccccctatag ccatataatt catctcctaa aatatgacga tttatgctag ctaaatgtgc
    21361 tctaatttga tgcgttctac ccgtaaaaag cttagcccca ataagactca cttcctcgct
    21421 ttttgccaag ttaacaaaag cacttttagc ctccttagaa cccttaacaa agctatttgt
    21481 aactattttt ttaatagcat tagcactgga tcgaatcaaa gctttatcta tgataatttt
    21541 atcctctttt agtggcaaat caattaacgc aagataaatt cttcccatag ttttatcact
    21601 aagctgctca ctaagctttt gatgagtaaa attatttttt gctatcaata tagctccgct
    21661 tgtttcctta tcaagcctat gaacaagccc tgcgcgcact tctccgccta aggtagaaag
    21721 ggtgtattgt ttttctataa gccaatccac caaagtcgca ctcttaacac tttttgctcc
    21781 atgaacaacc aaatttgaag gtttatttaa aaccaacaaa tcctcatctt cgtataaaat
    21841 ttctatatca aaatctatat caaatttagg cttagcttcc tctacaagtg gcaaatttaa
    21901 aacaagttta tctccgactt ttaacttgaa tgaattttta ttttgaattt tatcattaac
    21961 ccaaacgcag tttttttcta tcatcgaggc tatttgattg cgactttgct gaagattttt
    22021 agctaaaaaa atatcgagcc ttgaaggttc atcaactaaa aaagtttgca ttttttcctt
    22081 ataaaatttt atataattta gagttttatt ttataattat attttaatac tacaaattga
    22141 aggcaaattt tgtttatacc tgatagaaga attttaacac attttgatta tatgcaacct
    22201 attttgtttg tacctattat tttaatttcg ttttttttaa tctttgaagc caatgctttt
    22261 ttagccgaaa aacaatttgt ctatgcctgt gtaggaattg ccgcatttag cgtattcttt
    22321 ttattgccta ttcgcaaact gatgtggctt atacccatag cttattgggt caatatcttt
    22381 ttgcttttaa gtacagatat ttttggtgtt gaaaagttgg gtgctaaaag atggcttgaa
    22441 attcctttta ctcattttac catccagccc tctgaaattt ttaaacctag ttttatttta
    22501 atgcttgctt atctcatcta tcaagatcca ccgcctaaaa atggctataa actaaaacaa
    22561 tttctaaagc ttagtttttt tatcattttg ccttttttat tgatcgctca agagcctgat
    22621 ttaggaagtg ctatggtgct tttaatcgta ggttttggcg tgctttttat catgggtgtg
    22681 cattataaaa tttggcttag tatcatcatc gccatcggta taagctctcc catcatttat
    22741 acgcatttgt taaagcccta ccaaaaacaa agaattcatg attttatctc cgaaaaacca
    22801 agctatcaag tcgcacaatc catgatagcc ataggcaatg gcggccttat aggaaaatct
    22861 caagatgaag ctacacaaac gcattttaac tttttgccta tctctacaag tgattttatc
    22921 tttgcatatc ttatagaaag atttggcttt ttggggggat ttgtattgat tttactttat
    22981 actctactca tctttcattt actaagctta aatcaaaagc ttaaggatga ttattttgct
    23041 agggttgcca taaactgcgt agcattgttt atttttattt atgctgcggt aaatatttcg
    23101 atgactatag gatttgcgcc tgttgtcggt atccctttgc ctttttttag ctatggtgga
    23161 agttctttta cgatttttat gattttcttt ggaattttac agcatttgat tacctttaga
    23221 tacttttggg tagacaataa aaataaataa aataatttta agcaaaaata aggtataatt
    23281 ttatctttaa aaattaaggc ggatttatag ctcagttggt tagagcaacc ggctcataac
    23341 cggttggtcg caggttcgag tcctgctaaa tccaccatta cttcttttct gaaattatcc
    23401 caagcaatct taagtaatct aaaattatca attaagatat gataaaatca tactttaaat
    23461 tatctcaaat tatcttaaat tatcttaaat tattttaaat tatcaggatt gacaatttta
    23521 aaagtatatg ttatagtgta tgttaaattt taaaattcaa aaataacata tactttttaa
    23581 cataggaata ttaaataatg attattgtta atgataagca acttaaaact ttaattgtaa
    23641 aaaaaagaac atacattaaa gatgcgtgca ccaaaaatct ctacatcgaa gcaaaagatt
    23701 cgctaaaagg tactattatc tttttttatt ttagatatag gctaaacaaa aaaatacaaa
    23761 gcattaaaat aggaaaatac ccaacaacta cattgtcaag tgcaagagaa aaagcaaata
    23821 tttttaatga tatgttagcg caaaaaattg accccaaaga acaaattcaa gataaaggtg
    23881 taaaaaaatc aaaaaccgta aaagaaattt ttcatgaatg gagccaagtt ttttataaaa
    23941 ataatacttc ttataattta tcgaagagat tagaaactca tattatttct aaatacgaag
    24001 acaaacatat taatgaactt gccaaaaatg atatacttct tgttcttgat aaactttatg
    24061 tagaaggtaa actcgaaact ataaaaagag tcttcttggg tttaaaaaaa atgttaatgt
    24121 atgccataaa taaagaatat atagaaaata gcaatatttt aactttggac atgaaagctc
    24181 tttacggctc gcctaaaaaa caaaatctta gagctatcac aaaagaagaa agatttaaag
    24241 agttgctatt agcaatagaa aattataatg gaagtatatt cacaaaagta gccttgcaaa
    24301 tcagcccata tctattttta agaagtacta atatcagaaa tttagaatgg agtgaaatag
    24361 atttcaaaaa tttaaaaata attatacctg caaataaaat gaaagggggt gaagatttta
    24421 ttataccact aagtgaaagc gtgatcaagt tgtttgaatt tatcaaacct ttttcattcc
    24481 acaattcaaa atatgttttt ccaagtgata taagcaaatc caaaactatg agtgaaaaca
    24541 cattaaatca agccatcaaa agattaggct ttggcgatga aatggttttt catggtttta
    24601 gaacaacagc ttcaaccttg ctttatgagt ttaaaaattt gcatggacaa gatagcgaag
    24661 ttatagagtt atgcttagat catcgagaaa gaaataatgt taaagctact tataatagaa
    24721 gtttaagact aaatgataga aaactcttaa tgcaatattg gagtgattat atcgacaaat
    24781 taaaaggaat aatatgaaaa acaaatattt aaaagaag
//
LOCUS       DBBXOW010000018        24348 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.018, whole genome shotgun sequence.
ACCESSION   DBBXOW010000018 DBBXOW010000000
VERSION     DBBXOW010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24348
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.018"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(191..910)
                     /gene="kdsB"
                     /locus_tag="ACJE1S_000720"
     CDS             complement(191..910)
                     /gene="kdsB"
                     /locus_tag="ACJE1S_000720"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HGG0806285.1"
                     /translation="MIIIPTRLASTRFPEKILCDIGGVPMFIATAKQVSSVDEVCIAV
                     DDEKVLEIAKQYGFKAVLTSKNHESGTDRINEACKKLGLKDDEIIINVQADEPFIECE
                     NLAKFKEFANSCLKQEAFMASCYKDISKDDASDPNLVKVVCDKNDFALYFSRAKIPYE
                     RADYEESFKGHLGIYAYSVKALREFCTLENSALEKAEKLEQLRAIENGKKIKMLQINT
                     SSMGIDTKEDYERALRIYLGK"
     gene            complement(907..2319)
                     /gene="thrC"
                     /locus_tag="ACJE1S_000721"
     CDS             complement(907..2319)
                     /gene="thrC"
                     /locus_tag="ACJE1S_000721"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HGG0806286.1"
                     /translation="MLLVESRNINNKVDFKNALVNPNAPQGGLYSPLSLPQFDGEKYA
                     NLSYKEFALKLIESFEFGHEALFDKALKSYEKFDDKNSPIALKKIKDKTYINELWHGP
                     TRAFKDMALQPFGVLLNEFSQNEKILIICATSGDTGPATLKSFENLENIKVLCMYPKG
                     GTSAIQELQMRALDKGNLKVFAIRGDFDDAQRTLKKLLAKETFKDELSKVGYGLCAAN
                     SVNFGRILFQIIYHYYASLKLYHEFKEEIEILIPSGNFGNALGAYYAKLMGAKISKIK
                     IVSNANNILTDFFTKGEYDLRDRSLKKTISPAMDILISSNIERLLFSKFSDLRTNELM
                     NLLKTEKYFKLEKEELQSLQEDFEADFCTDEECMKFIKESKILIDPHTATCFKMLDTS
                     KPSIITSTAEWTKFTPSMVKALFGRECKDEKADFELLAKEFKVDIKKDLLELFDLKNA
                     DEKVYEIGDIEGEILEWIKK"
     gene            complement(2306..3238)
                     /locus_tag="ACJE1S_000722"
     CDS             complement(2306..3238)
                     /locus_tag="ACJE1S_000722"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HGG0806287.1"
                     /translation="MNEEKKYQLWLDNYFFKPSFFQKCLAFIFLPLSLLYGLCAILNT
                     CFRQKIDFKKPIISVGNLSFGGNGKTPICKAIAREFEGVFIVLRGYRRKSKGLLVVKN
                     ENAILAQVSQSGDEAMEYAFEECVKGVIVSEDRVAGIQKAFELGAKIVLLDDAFSKFH
                     IQKFDILLESKIKPYFNFTLPSGAYRLPKFYEKKADFIACEGRDFIRYSYVKENPKAV
                     LVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELQALLDKHHCDTLMLTFKDYVKVK
                     DFGFKCQIIELNIELKENFKEKLYQYIRSFNVAS"
     gene            complement(3238..3984)
                     /locus_tag="ACJE1S_000723"
     CDS             complement(3238..3984)
                     /locus_tag="ACJE1S_000723"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HGG0806288.1"
                     /translation="MDCEKISQTLCEFIQHKVKDSGLNGVVLGLSGGIDSALVATLCK
                     KALGENVFALLMPTKFSNQENLNDALKLCQELNLKYKIIEIQDILEAFLKQSENTDEL
                     SRGNFAARIRMSLLYDYSALKKALVVGTSNKSELLLGYGTIYGDLAYAFNPIGELYKS
                     EIYGLARYLNLNEKFIQKAPSADLWIGQSDEKDLGFSYELIDKGLKALENQDMKALEN
                     LDKKLLDMLQSRIKNNAFKRNMPEIASLNK"
     gene            4058..4654
                     /locus_tag="ACJE1S_000724"
     CDS             4058..4654
                     /locus_tag="ACJE1S_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HGG0806289.1"
                     /translation="MQILKQACGPYETNCYILNTSKGDFIIDPGVNALSFIKQYAKKP
                     LAILNTHGHYDHVWDNARVKKEFDIPIYIHKNDEFMLQDPFGKGFEPSKADVLIENED
                     ELEISNTRFKFHFLPGHTPGCTMIELMGENLMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFRLLPGHGQETSLRAEQVHLPSWLRYF"
     gene            4666..4971
                     /locus_tag="ACJE1S_000725"
     CDS             4666..4971
                     /locus_tag="ACJE1S_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806290.1"
                     /translation="MNLDFVLLCFFVFLDAFALLGLLLGNKKKNQFNDKKFYKICPCK
                     QMAENGSLSTICIYSAVGGFFYSVLSIGYIGFGDLFLNLIFLFTLLSAYMGWKLKLD"
     gene            complement(5079..5858)
                     /locus_tag="ACJE1S_000726"
     CDS             complement(5079..5858)
                     /locus_tag="ACJE1S_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HGG0806291.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSNKASWVTGHTFIVDGGTTFK"
     gene            complement(5858..6754)
                     /gene="dapA"
                     /locus_tag="ACJE1S_000727"
     CDS             complement(5858..6754)
                     /gene="dapA"
                     /locus_tag="ACJE1S_000727"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HGG0806292.1"
                     /translation="MDKNIIIGAMTALITPFKNGKLDEQSYARLIQRQIDNGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVDICKGTKVKVLAGAGSNATHEAVDLAQFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIANSVDIPVLLYNVPGRTGCEICTETIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMILISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SKLTHLALEENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLC
                     SPSKENFAKIEEVMKKYKIKGF"
     gene            complement(6757..7998)
                     /locus_tag="ACJE1S_000728"
     CDS             complement(6757..7998)
                     /locus_tag="ACJE1S_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M16 family metallopeptidase"
                     /protein_id="HGG0806293.1"
                     /translation="MIDYSKITLKNKLDVYTFPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCSKKNLDKTL
                     ELFAELMENLSLKDEEFQPERSVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSTYYQPKNAILIVSGDIDSEEVFSGAKKHFEKIKNTKPI
                     PKIHTKEPKQDGAKRIEIKKPTQTELLAIGFKIPNFKHKDIPALNALAELLGNGKSSM
                     MNEILVDELNLVNEFYSFANDCIDENLFIFICNCNVGVKAEKVEQELWKIIDRLKKGD
                     FSSKDLQKVKNNVKSDFIFSLDTASAVSNTYGSYLARGDLKPLLEYESNIAHLCEQDL
                     VKSAKKYFDRSNSTTLILRKD"
     gene            complement(7995..9053)
                     /locus_tag="ACJE1S_000729"
     CDS             complement(7995..9053)
                     /locus_tag="ACJE1S_000729"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HGG0806294.1"
                     /translation="MLYNFIKPLLFKLDPENAHALVEGSLRSLNATLPGSLSFFAYNY
                     IVNDDSLKQKLLGLDFNNPVGLAGGFDKNATMIRPLAALGFGFLEFGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNQGAEKIAARLSKIYPFVLPLGANIGKNKITSNDKALE
                     DYFTLFRNFKDLCDYFIVNISSPNTKNLRELQNDDFLSHLLEEARKITNKPILIKIAP
                     DMPIDSALKLCENAILKGADGFIIANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     LAKVLFGKTLLIASGGIDSGELAYERIKNGANLIQVYTALIFKGPSLVRDINKTLIEL
                     LKQDGFMHISEAVGVNLK"
     gene            complement(9099..10832)
                     /locus_tag="ACJE1S_000730"
     CDS             complement(9099..10832)
                     /locus_tag="ACJE1S_000730"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806295.1"
                     /translation="MHKDMTLKDVLIRFKPFYKKYKKEFAIAIFGMILTSIGTAGSFA
                     SLKPILDYIFVEKNEALLYTLPFLLVIIYILKNLGFYLQTYYLSFIGMDTLRILRFKV
                     LKNLLKLDMDFFKRNRSGELVSRCTNDINALQSIVSNIIPDFFRELLTIVGLLIVVFY
                     QSPILAFFALVVLPCAILPLVHFARKLKKYARSIQETNSDLLSRLSEIFSNIELIKAS
                     NTQNKESEKFAKQNNELCRLNLKSTRIDALTSPLMEIIGSLGVAAVIIIGGREVIHGT
                     MSVGSFFAFITALFAIYTPLKRLSSLYGRLQGAIAASERTFYLLDLEPQILNGSKNLE
                     SIARIEFKQVDFAYENPYKSVLKDINFEFNKGEILALVGTSGSGKSSIINLLMRFYDK
                     QKGEILLNDLDISEFSIESLHDRIGLVTQNIYLFNDSFAENVAYSEEPNKEKIIKALK
                     LANAYEFVQEMGGIYAEIKEHGKNLSGGQKQRIAIARALYKNPDLLIFDEATSALDNE
                     SEKAIIETIENLKKDRLVLMIAHRLSTIENADKIAVIDQGQMIAIGSNEELLQSCELY
                     QKFKNKEVDKV"
     gene            complement(10833..12215)
                     /gene="cysS"
                     /locus_tag="ACJE1S_000731"
     CDS             complement(10833..12215)
                     /gene="cysS"
                     /locus_tag="ACJE1S_000731"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HGG0806296.1"
                     /translation="MKLMDSVLKEKIELDQDNVNIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLSLGYRVQFARNYTDIDDKILKKMSESGKSLNELVEFYIANYERDMKALNVL
                     EPDFKPRATYYIEPMLDLIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENVS
                     RLSNEVEKRNESDFVLWKFDENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGV
                     DLLFPHHENEAAQCRCACKRTLAKIWLHNGFVKINGEKMSKSLNNSFFLKDALKDFMG
                     EALRFYLLSSHYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHS
                     NIAKQILEVLSDDLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIF
                     GFGFMDENLYFQWGVAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQD
                     TPQGTIWEKI"
     gene            complement(12215..13666)
                     /gene="murJ"
                     /locus_tag="ACJE1S_000732"
     CDS             complement(12215..13666)
                     /gene="murJ"
                     /locus_tag="ACJE1S_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HGG0806297.1"
                     /translation="MKSLVFKNFIINALGILFSRVLGLARDVLIALFLGAGIYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMYQFSVIVFLFCLLVSFFS
                     SFFTKLFAFGFSSDTIALASPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKDAPQDTLYYFSYATVLSGVAQLILHLMVLRKNPVIRAMALSVKF
                     RRAKAKLEGFYSNFFHGVLGSSATQISSLLDTTIASFLMTGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALSFMQRALAVLSILLIVSSIVGSVFALEISKL
                     LFERGNFTHEDSIITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAFIAFKALLI
                     SALCSVLFIFLIKDESLKVIAVALSSSLSAFYLLIANIKEFGFKNFFALISFKFCFLM
                     ITGLVVFTILLYEIKPYLIEALLWIVASVKGVF"
     gene            13770..15635
                     /locus_tag="ACJE1S_000733"
     CDS             13770..15635
                     /locus_tag="ACJE1S_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein A"
                     /protein_id="HGG0806298.1"
                     /translation="MALDEKIISYTENPSRELLSVASRTNIALNELDFHLLAFSTQYC
                     LENTEWIKIAEKDLTLFEKDEVFLKEDLQIKQEYKIEIFHQTRQDKTANAIKLIANKN
                     LTKIVAQINFNELKYHEKLTFELLQIIYKKMLKLKFLIGIRIFDFKKELIRICNEHKK
                     NTLNKTLQINVAKGVEPIQSQDEALVLLYKEKAKDYTIDEKRSGIIAVDENEVVLRYN
                     KFKQGKEGKDLNLHTLKVIDANQNKIKFNCSSLAFKTVEYEDYTEYLALKKGYVVEDQ
                     DKFDIANLLEFNNKVDFKNIGIIRAGLDKNVKINIKFISDMQDAVNSGVGIECEELNI
                     TGSVGSNTNLKATRMRVEGTTHTKSKIYAKEAYIKTHRGFAQADKLNIDLLEGGNIKA
                     KEVRIKKSLGGVIEADRIYIEQLESNNSCVFYNNVVIERFEGENNKFHTKIKKMDKDY
                     DQELLKIKNEISSLHHKISKLKQYILSNKNNVLDIEKKVLELKNQGQNIPSQYEKFLK
                     NFSIQNANLNKLQNQEKELLEYRKKIHDELLALEEDLFKAKFINKSGKWSDMNEIRFS
                     LLEPKEDIFYSSSTKESAKFIALKKIIQNNQEYIEIDKKLDYEEKDIEWLLPSKE"
     gene            15611..16162
                     /gene="ruvA"
                     /locus_tag="ACJE1S_000734"
     CDS             15611..16162
                     /gene="ruvA"
                     /locus_tag="ACJE1S_000734"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HGG0806299.1"
                     /translation="MVVAIEGIITKKEPTFAIIKCASGLSYGVFISLFCAAKLETHQK
                     YELFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGASTAMAICSSLDVNSFYKAL
                     NLGDESVLKKVPGIGPKSAKRIIVELGDAKVQLESVSDDKSEALAALLSLGFKQDKIL
                     SVLSTCNGKDTSELIKEALKKLA"
     gene            16172..17212
                     /locus_tag="ACJE1S_000735"
     CDS             16172..17212
                     /locus_tag="ACJE1S_000735"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HGG0806300.1"
                     /translation="MKLAILFGGNSYEHEISIVSAVVLKKVINTDLTFIFCDEKRRFY
                     LIPSEKMNSKTFSGGAYQKEKELFLRQKAFYHKSLWSEKNLDLDCVINLIHGRDGEDG
                     KIASLLEFFDIKFIGPRVEASVLSFNKEFTKLYAQSVGVKTLDYQMLRKSQKQDFTAH
                     FPCILKPARLGSSIGISIAKNEKELDYAKDVGFEFDTDILVEDFKSNIKEYNLAGCMI
                     KDEFIFSIIEEPKKKEFLNFEQKYLSFSGHNELIEADLSEELKQKLKDNFAKIYNPLF
                     KGALIRCDFFILDNEVYLNEINPNPGSLANYLFKDFNKIIEQLALSIESEKKIKITYE
                     FLHSINGQKGKL"
     gene            17272..17487
                     /locus_tag="ACJE1S_000736"
     CDS             17272..17487
                     /locus_tag="ACJE1S_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HGG0806301.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPLIEKLKKSESGKMVILKNNKFEA
                     VLLSMKEFERLQNAMQLLENIYKNQKV"
     gene            17489..18220
                     /locus_tag="ACJE1S_000737"
     CDS             17489..18220
                     /locus_tag="ACJE1S_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG0806302.1"
                     /translation="MALVNVIYNNDTYELSYEILNQDKKKSLLILHGWGANKELMKQA
                     FSKNLNDFCQIYLDLPGFGNSSAPKSLYSQDYVNIIKEFLKEKKLDIDIFLGHSFGGK
                     IAALLVLDFQKAQLVLLSNSGILAKKSFKVRFKIMLFKFLKKLGLGRFYRYFASKDGA
                     NLNPLMYQTFKNVVDEDLSQTFAKIDNKSLIFWGIDDKATPLKSGEAMHKLIKNSEFY
                     PLEGDHFFFLKHSLFIANKIKENQC"
     gene            18214..19641
                     /locus_tag="ACJE1S_000738"
     CDS             18214..19641
                     /locus_tag="ACJE1S_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HGG0806303.1"
                     /translation="MLTNTLYFINSLFFNFCVAFYLMSALQWYSYKFKRVFFHYHRPL
                     WHLYFLFLPYFFFLTFPLYSLAYFALIHTPILYFWNKSIDKKLVFTSKVKWFFVFVFI
                     YNTLFAILALRFSFLFNLFALPFALISLKIFELFSNLYFKNKAKAKLQNNPQLKIILI
                     TASFGKTNIKNFLYELLKDDFKTYKTPRSVNTLLGIIADINTNLSDDTQIYIAEAGAR
                     VKGDIDVITRFLEPQICIVGEIGNAHLEYFKNIENTRKTKLEALNSKRLEKAFLHTST
                     QKSEDELILLYDDKLQDIQASLQGLEFKINLENKTYEFKSQILGDFNAQNLCACILCA
                     NYLGVKIEKIQKQVLKINSVEHRLQIISKEPKFIIDDGFNGNYKGMSASYKLCKNYKG
                     RKVLVSPGIVEVDKDENVKLAKIINECFDLAVITAQVNADIFKKELKIKTIILKEKAD
                     LVKVLAKETQQGDLILFSNDAPSFM"
     gene            19790..23299
                     /locus_tag="ACJE1S_000739"
     CDS             19790..23299
                     /locus_tag="ACJE1S_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HGG0806304.1"
                     /translation="MQKNSFLKIYGLIPFLLVAFINAFVDLGHKIIIQNTIYKVYEGS
                     TQLLLTAIVNALILLPFILMLSPSGFLADKYPKNLIMKLSAAFSVMLTIIICISYYNG
                     AFWTAFTLTFIMGIQAALYSPSKYGFIKELVGKDLLAMGNGAVNAVSIVAILAGMSLF
                     SLSFESLYDINHNSSEEVLKQVAPLGFLLILFSLIELYLAWRLPKLKDEIKELKFDSK
                     RYLSGKLLMSNLKLIFENKVIWLCIVGISIFWAISQLYLVSFPVFSKNELFIENTFFV
                     QVSLGFSGIGVVLGSLIAGRFSKNYIELGLIPFGALGVFLMALIMPYFTSLITYSFIF
                     FIFGFCGALFIIPLNSLIQFHAKENELGKILAGNNFIQNIAMLTFLVLATLFANLEIN
                     VIYLFYFITLVAFLGAIYVVFKLPFSLVRMLLSIAFLGRYRLLVEGFKNIPEKGGALL
                     LGNHISFIDWAIVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGVIPVSSAASKASLEL
                     IAERIKQGDLVCLFPEGVLSRHGQLNEFKGGFEYVCSNLEEDDGVILPFYIRGLWGST
                     FSRSDEEFSARNRTLSKRNIAIAFGAPMSLHSKKEEVKAKVFELSFMAWKSQCEAMHT
                     IARAFITSAKRNLSNIAIIDSLAGAISYRKLLSLSFILSTLIKENSKKINSNFERGSY
                     APKEECVGILLPASFASSLLNLSVLLAQKVVVNLNFTAGEKALQAAVKSAQISQIYTS
                     KKFLEKLESKGVSLNFGEEVNLIYMEDVVEIFKKQKSKILAMMMAVSILPSFILKAIF
                     APSKNNLAIAAILFSSGSEGTPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLESIKSITFADPTDALGIAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDAIMFESLRVVVSGAEKLKSEVRSAFEMKFKKSIFEGYGATETTPVASVNLPNRFDA
                     DYWIVHRASKEGSVGMPLPGTAVRIVDPNTYETLKTNEDGLILIGGHQVMVGYLNNKE
                     KTDEVIKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGALEEEIAKF
                     IDTNIVKFCTVALEDEKKGEQVALLIECDEEFFEGVCEAIKSSSMPAIFKPSRYLKVE
                     KIPLLGSGKVDLKGAKELAKSLV"
     gene            complement(23378..24289)
                     /locus_tag="ACJE1S_000740"
     CDS             complement(23378..24289)
                     /locus_tag="ACJE1S_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HGG0806305.1"
                     /translation="MFIFSPLFTIFILLAGGYFAKRVGILKQKQARTFLDFAIVFALP
                     CLIFDKAYHLNFDFSLIVLIFIGFFSCALAAFIVVFLGFIFNFSKATLVSMFLLSCFG
                     NTIFVGMPIVEGIFANAQFGAEVILYDALATTLPISLLGPFILSLGSGEKVSLVANIK
                     KILSFPPFLALLLGFLCKLISLPEFIFSPIRLFGGAATPVALFAIGLGLGFMAIKTAY
                     KPTILVILAKMVLAPLIFVLLLKLFGFEMKASIIVAIIESATPTMTLAGAMVMKAKLD
                     SNLAVSTVAFGVLFAFISMPILVWALA"
BASE COUNT         8525 a         4130 c         3520 g         8173 t
ORIGIN      
        1 attagcaaaa cttattttag aattttcttt actttcttta ttagcttttg cttgtgaaag
       61 tatagaacca tagtttgagt tatcattgat gctaaagata ctcatattaa ttccttaatt
      121 tagatttttc tgccttcaat ctaaatatat taaaataata taagcaaaat ctgttccact
      181 ttggaataaa ttattttcct aaataaattc gcaaagccct ttcatagtct tctttggtat
      241 caatccccat gctactagtg ttaatttgaa gcatttttat ctttttacca ttttcaatag
      301 ctcttaattg ttccaatttt tcagcttttt caagggcgga attttccaaa gtgcaaaatt
      361 cacgcaaagc tttaacacta taagcataaa ttcctaaatg tcctttaaaa ctttcctcat
      421 agtctgccct ttcgtaagga attttcgctc ttgaaaaata taaagcaaaa tcatttttat
      481 cgcaaaccac tttcaccaaa ttcggatcgc ttgcatcatc tttactgata tctttataac
      541 aacttgccat aaaagcttct tgtttcaaac aagaattagc aaattcttta aatttggcta
      601 aattctcgca ttctataaag ggttcatctg cttgtacatt gatgatgatt tcatcatctt
      661 ttagaccaag ctttttacaa gcttcattga tcctatctgt gccactttca tgatttttgc
      721 ttgttaaaac cgctttaaaa ccatattgtt tggcaatctc taacactttt tcatcatcta
      781 ctgctatgca aacctcatcc acactagaaa cctgtttagc agtagcgata aacataggca
      841 caccacctat atcacaaaga attttttcag gaaaacgcgt tgaagctagt cttgtgggta
      901 tgataatcat tttttaatcc attctaaaat ttcaccttcg atatctccta tctcgtagac
      961 tttttcatca gcatttttaa gatcaaaaag ctctaaaaga tcttttttga tatctacttt
     1021 aaattcttta gccaaaagct caaaatctgc tttttcatcc ttgcattctc taccaaaaag
     1081 tgcttttacc atactcggag taaatttagt ccattctgct gttgaagtaa taatacttgg
     1141 ctttgaagta tcaagcattt taaagcaagt tgctgtatga ggatcaatta aaattttact
     1201 ctctttaata aatttcatac attcttcatc agtacaaaaa tcagcttcaa aatcctcttg
     1261 taagctttgc aattcttctt tttctaattt gaaatatttc tcagttttta acaaattcat
     1321 caattcatta gtcctaagat ctgaaaattt agaaaataac aatctttcaa tatttgaaga
     1381 aataagtata tccatagctg gagaaatcgt cttttttaaa cttctatccc taagatcata
     1441 ttctcctttg gtgaaaaaat cagtaaggat attgttagca ttagaaacaa tttttatctt
     1501 agaaatttta gctcccatta atttagcata atacgctcct aaagcattgc caaaattccc
     1561 acttggtata agaatttcaa tctcttcttt aaattcatga taaagtttta agcttgcata
     1621 gtagtgatag atgatttgaa ataaaattct accaaaattt acagaattag cagcgcaaag
     1681 tccgtatcct actttgctta actcgtcctt aaaagtttct tttgcaagca atttttttaa
     1741 agtgcgttgt gcatcatcaa aatctcccct gatagcaaaa acctttaaat ttcccttatc
     1801 taaagctctc atttgaagct cttgtatagc acttgttcca ccttttggat acatgcaaag
     1861 cactttaata ttttctaaat tttcaaagct tttaagcgtt gcaggtcctg tatctccact
     1921 cgtagcacaa atgattaaaa ttttttcatt ttgagaaaat tcatttaaaa gcactccaaa
     1981 aggttgcaaa gccatatctt taaaggctct tgtaggccca tgccaaagct cgttgatgta
     2041 tgttttatct tttatctttt ttaaagcgat aggtgagttt ttatcatcaa atttttcata
     2101 actttttaaa gctttatcaa acaaagcctc atgtccaaat tcaaaactct ctatcaactt
     2161 taaagcaaat tctttataag ataagttcgc gtatttttcc ccatcaaatt gaggtaaact
     2221 taaaggcgaa taaagcccac cttgtggagc attgggatta actaatgcat ttttaaaatc
     2281 tactttattg tttatatttc tactttcaac tagcaacatt aaaactcctt atatattgat
     2341 ataatttttc tttgaaattt tcttttaatt ctatattcaa ttctataatc tgacacttaa
     2401 atccaaaatc cttcacctta acataatcct taaaagttag cattaaagta tcacaatgat
     2461 gcttatccaa caaagcttgc aattcttctt ttttaaattc ataatgatct ttaaaaaaat
     2521 aacaagccct agcctttata aaatgctcat aaagcctaaa aggctttgca atcgctgtaa
     2581 ctaaaactgc cttaggattt tcttttacat aagaatagcg tataaaatcc ctaccctcac
     2641 aagctataaa atcagctttt ttttcataaa atttaggcaa acgataagca ccgcttggta
     2701 aggtaaaatt aaaataaggc ttgatcttgc tttcaagcaa aatatcaaat ttttggatat
     2761 gaaatttaga aaaagcatca tctaaaagca ctattttagc ccctaactca aaagcttttt
     2821 gaattcctgc taccctatct tcacttacga tcacaccctt tacacactct tcaaatgcgt
     2881 actccatcgc ctcatcgcca ctttgtgaaa cttgagctaa aattgcattt tcatttttaa
     2941 ccacaagcaa acccttgctt ttacgcctat agcctctaag cactataaaa acgccttcaa
     3001 attcccttgc tatagccttg caaataggcg tttttccatt tcctccaaag cttaaatttc
     3061 ctacgcttat aatgggtttt ttaaaatcaa tcttttggcg aaaacaagta tttaaaatcg
     3121 cacataaacc ataaagcaaa ctcaaaggta aaaaaataaa agctaaacat ttttgaaaaa
     3181 agctgggctt aaaaaaataa ttatcaagcc aaagttgata ctttttttct tcattcatta
     3241 tttattcaaa ctcgcaattt caggcatatt tcttttaaaa gcattgtttt ttattcttga
     3301 ttgaagcata tctaataatt ttttatctaa attttctaat gctttcatat cttgattttc
     3361 aagcgctttt aatcctttgt ctataagctc ataagaaaaa cccaagtctt tctcatcact
     3421 ttgtcctatc caaagatccg cacttggagc tttttgaatg aatttttcat ttaaatttaa
     3481 atatcttgct aatccataaa tttcactttt ataaagctct cctataggat taaaagcgta
     3541 agctaaatct ccataaatcg tcccataacc caaaagtaat tcgcttttat ttgaagtacc
     3601 aaccactaaa gcttttttta aagcagaata atcataaagc aagctcattc taatacgtgc
     3661 agcaaaattt cccctgctta actcatctgt attttcactt tgttttaaga aagcctctaa
     3721 aatgtcttga atttctatga ttttgtattt taaattcaat tcttgacaaa gttttaaagc
     3781 atcgtttaaa ttttcttgat tagaaaattt tgtaggcatt aaaagcgcaa aaacattttc
     3841 acccaaagcc ttcttacaaa gcgtcgccac caaagcagaa tcaatccccc cgctaagtcc
     3901 taaaacaacg ccatttaagc ccgagtcctt aaccttgtgc tgaatgaatt cacataaagt
     3961 ctgagaaatt ttttcacaat ccataaactt acctttaaac aatcaatgta taattataat
     4021 tcattttagg ttcaaatttc aataaaaaag gctaaaaatg caaattctaa aacaagcttg
     4081 cggtccttat gagacaaatt gctatatttt aaacacctct aaaggggatt ttataataga
     4141 tcctggcgtt aatgctctaa gttttataaa gcaatacgct aaaaaacctt tagcgatttt
     4201 aaacactcac gggcattatg atcatgtatg ggataatgct agagtaaaaa aagaatttga
     4261 cattcctatt tatatccata aaaatgatga atttatgcta caagatcctt ttggaaaagg
     4321 ttttgagcca agtaaagctg atgttttaat cgaaaatgaa gatgagcttg aaatttctaa
     4381 cactcggttt aaattccatt ttctccctgg gcatacgcca ggctgtacca tgatagaact
     4441 tatgggtgaa aatttgatgt ttagcggaga ttttttattt tatagaagta taggaagatg
     4501 ggattttcct tattcagatg ctaatttaat gaaacaaagc ttggaaaaag tgatgactta
     4561 taaagaagac tttagacttt tacctggaca tgggcaagaa acaagcctta gagctgaaca
     4621 agtgcattta ccttcttggc ttagatattt ttaaaggtga tttttgtgaa tttagatttt
     4681 gtgttgcttt gcttctttgt ttttttagat gcttttgcgc ttttgggctt gctcttagga
     4741 aataagaaaa aaaatcaatt caatgataaa aaattttata aaatttgtcc ttgcaaacaa
     4801 atggcagaaa atggctcttt aagtacgatt tgtatttatt ctgctgtggg tggatttttt
     4861 tatagtgtat tgtctatagg ttatattgga tttggcgatt tatttttaaa tttgattttc
     4921 ttatttacgc ttttgagtgc ttatatgggc tggaagctaa aacttgatta aactctgttt
     4981 ttataattgt tttaaaaaat ttatttttat aagtgcaagt ttttaagcaa gcacttaaaa
     5041 aataaataat attttttaag taaaattaaa tttttatctt acttaaaagt cgttccacca
     5101 tctacgatga aagtatgtcc tgttacccag cttgctttat ttgagcaaag aaaaagacaa
     5161 gcaccagcta gatcttcagg ctgtcccata cgatttaaag gacttaaatt tatagttgct
     5221 tgtttaacct cttcataatt tgtaaaagct cttaaagcat ctgtttcaat cggcccaccg
     5281 ctgactacat ttacacggat atttttttct ccaagctctg ttgctgcata tcttgccatt
     5341 gcttcaaccg cagcttttgc tgtgccgtgt cctgagtaat tttctatata aaccaaattt
     5401 ccagtagaag aaattgaaat aatacttcca ccccctactt tttccattct cttagctgct
     5461 tcttgagctc ctacaacaaa agcatttaca gtagcggtaa agatattgtt aattcctttt
     5521 ggttttaact tcataaattt agtataacca cccacaactg cacgtcctga aatgatagca
     5581 tttgagataa aataatccac tctatcaaaa tccacatcaa ttttttcaaa aagttcttta
     5641 taggtttcag gttctaagat attaaactca taagctctag ctttgatttt ataatttttc
     5701 tccaaatctt gaaccatttc atcagcaatt tgcgcattag aattataagt aaaagctata
     5761 tttgcaccca ctttagcaaa ttcataaact atagctttgc ctatcccgcg agttccaccg
     5821 ctaatcacta aagtttttcc ttgaaattct gtattcatta aaatcctttg atcttatatt
     5881 ttttcatcac ttcttcaatt ttagcaaaat tttccttact tggagaacaa agaggaagtc
     5941 taaattccaa actttcaata agtcctgcta tatacatggc agtttttata gggatgggat
     6001 tgctctcgca aaataaaatt ttattgatat tataaagctc atcattaatc tttttagctt
     6061 ctttataatt ttcttccaaa gccaaatgag taagcttgct aatcatatca ggcaacaaat
     6121 ttgaagtaac tgaaatcacc cctttgcccc cattagaaag tataggataa ttgatcgcat
     6181 cttcacctga aatcaatatc atccttggtt catgcgcaag caaatcaacg catttgtcta
     6241 tatttccgct tgcttcctta accccataga tattttcaca atctctaaat aatttaataa
     6301 tagtctcagt gcaaatttca cagcctgttc ttccagggac attgtataaa agcacaggaa
     6361 tatccacact atttgcgatc gctttataat gctcataaag tccttgctgt gttggtttgt
     6421 tataataagg agccacactt aaaattccat ctgctccatg ctctttggca aattgagcca
     6481 aatccacagc ttcatgggta gcattacttc cagcacccgc tagaacttta accttagttc
     6541 ctttacaaat atctactgca atttcaatac aagttctatg ttcttcatgg gttaaagtcg
     6601 cgctctctcc tgttgtccca acaggaacta ccgcatcgat gccattatca atttgtcttt
     6661 gtatcaatct tgcataactt tgctcatcta acttgccatt tttaaaaggt gtaatcaaag
     6721 ctgtcattgc tccgataatg atatttttat ccatttttaa tcctttctta aaatcaatgt
     6781 agtcgaattt gatctatcaa aatatttttt agcgctttta accaaatctt gctcgcacaa
     6841 atgggctata ttgctttcat attctaaaag aggttttaaa tcccctctag ccaaataaga
     6901 accataagta tttgaaaccg cacttgctgt atcgagtgaa aagataaaat cactcttgac
     6961 attatttttt actttttgca aatccttgct cgaaaaatcg ccctttttaa gtctatctat
     7021 gatcttccaa agctcttgtt ctactttttc tgcttttacg cccacattgc aattacaaat
     7081 aaaaataaac aaattctcat ctatacaatc atttgcaaaa gaataaaact cattgactaa
     7141 atttaattca tcgactaaaa tttcattcat catagaactt tttccatttc ctaaaagttc
     7201 tgctaaggca tttaaagcag gtatatcctt atgtttaaaa ttaggaattt taaaacctat
     7261 ggcaagaagt tcggtttgag ttggtttttt aatctctatc cttttagctc catcttgttt
     7321 aggctctttg gtatgaattt ttggaatagg tttagtgttt ttgatttttt caaaatgttt
     7381 tttggctcca ctaaaaacct cttcgctatc aatatcccca cttactatca aaatagcatt
     7441 tttaggctga taataagtac tatgaaattc tttaatatct tctatgctcc aattttctat
     7501 atccttaaaa aagcctatag gggtccaatg ataaggatga tacataaaag cgtgattaaa
     7561 aagtctaaag tacaaatacc ctaaaggatt attatccgtt ctccatctac gctcttctaa
     7621 gaccacactt ctttcgggtt gaaattcctc atctttaagg cttaaatttt ccataagctc
     7681 cgcaaaaagc tctaaggttt tgtctaaatt tttcttagaa catttgatat aataatgagt
     7741 ataatcaaaa cccgtgctgg cgttatcaac cccgccaaag cccttaacta tctcatcaaa
     7801 ttcccctgct tttaaatttt tagtgctttt aaaatttaaa tgttcaagca tatgagctat
     7861 accgcttttt cccatgatct catttcttga acccacttta taaaaaatat ctacactgat
     7921 aacatcgctg tttttattta caggaaaagt ataaacatct agtttatttt ttagtgtaat
     7981 tttactatag tctatcattt taaatttact cccaccgctt cgctaatatg cataaaacca
     8041 tcttgtttta ataattctat aagagtttta ttaatatctc ttaccaatga aggcccctta
     8101 aaaatcaatg ctgtataaac ttgtattaaa ttagctccat ttttgattcg ctcataagca
     8161 agctcgccgc tgtctatccc tccacttgca ataagtaaag tttttccaaa taaaacctta
     8221 gcaagctctt taaagaaaat accgcttttt tcagtgatga gccttccgct tatgccgcca
     8281 aaagttctgt tattatcaag aagagaataa tctacacttg tattggctat gataaaacca
     8341 tctgctcctt ttaagatagc attttcacaa agctttaaag cgctatctat aggcatatca
     8401 ggagcgattt ttatcaaaat aggtttgtta gtgatttttc tagcttcttc aagaagatga
     8461 cttaaaaaat catcattttg aagttctctt aaatttttag tattaggtga agaaatattg
     8521 acgataaaat aatcacacaa atctttaaaa tttctaaata aagtaaaata atcctccaaa
     8581 gctttatcat tgcttgtgat cttatttttt cctatgtttg ctcccaaagg caaaacaaaa
     8641 ggataaattt ttgataatct tgcggcgatt ttttctgctc cttgattatt aaaacccatt
     8701 gcattttgta tgctttcttg ttttacaagg cgaaataaac gcggtttttc atttccctct
     8761 tgaggctttg gagtaaaggt tccaaactct aaaaaaccaa aaccaagagc cgctaaaggg
     8821 cgtatcatgg tggcattttt atcaaatcct cctgctaaac ccacaggatt attaaaatca
     8881 agtcctagta atttttgttt caagctatca tcatttacaa tataattata agcaaaaaag
     8941 ctcaaagagc ctggcaaagt ggcatttaag gaccttaaac tgccctccac taaggcatga
     9001 gcattttcag gatcaagctt aaaaagtaag ggttttataa aattataaag catattattc
     9061 ctcgtttttt taaaatttta actaaattta acttaaaact agactttatc tacttctttg
     9121 tttttaaatt tctgataaag ttcgcaactt tgcaaaagct cttcattgct tcctatagca
     9181 atcatttgcc cctgatcaat cactgcgatc ttgtctgcat tttctatagt gcttaaacga
     9241 tgggcaatca ttaaaacaag tctatctttt tttaaatttt ctatagtctc gatgatggct
     9301 ttttcacttt cattatcaag agctgaagtt gcttcatcaa aaataagcaa atcaggattt
     9361 ttatacaagg ctctagctat ggcaatgcgt tgtttttgac ccccgcttaa atttttacca
     9421 tgctctttta tctctgcata aattcctccc atttcttgga caaattcata agcattggct
     9481 agttttaaag ctttgataat cttttcttta ttaggctctt cgctgtaggc tacattttca
     9541 gcaaagctgt cgttaaaaag ataaatattt tgtgttacaa ggcctattct atcatgcaag
     9601 ctttctatgc taaattcact gatatctaga tcatttaata aaatctcacc cttttgctta
     9661 tcataaaaac gcattaaaag attgatgata gatgattttc cactcccgct tgttccaaca
     9721 agcgcaagaa tttcaccctt gttaaattca aaattaatat cttttaaaac actcttataa
     9781 ggattttcat aagcaaaatc tacttgttta aattcaatcc ttgctatact ttctaagttt
     9841 ttacttccat ttagaatttg tggctctaaa tcaagcaaat aaaaagtcct ctcgcttgct
     9901 gctattgcgc cttgtagtct accataaagc gaagataatc tttttaaggg tgtataaata
     9961 gcaaaaagtg ctgtaataaa agcaaaaaaa ctacccacgc tcatcgtacc atggatcact
    10021 tctcttcctc cgatgataat taccgcagcc actccaagcg atccaataat ctccataagt
    10081 ggactagtta gagcatcaat gcgagtggat tttaaattca aacgacaaag ctcgttgttt
    10141 tgtttggcaa atttttcgct ttctttgttt tgagtattgc tcgccttaat aagctcaata
    10201 tttgaaaaaa tttcactcag tcttgaaagc aaatcagaat ttgtttcttg tatacttcta
    10261 gcgtattttt ttaattttct agcaaaatgc accaagggca aaatcgcaca aggtaaaact
    10321 actagagcaa aaaaagccaa aataggactt tgataaaata ccactatcaa taaacccaca
    10381 atggttaaaa gctctctaaa aaaatcagga atgatattag aaactatgct ttgaagagcg
    10441 ttaatatcat tagtgcaacg acttactagc tctccgcttc tgttgcgttt aaaaaaatcc
    10501 atatcaagct ttaaaagatt ttttaaaacc ttaaaacgca aaattcttaa agtatccatt
    10561 cctataaaac ttaaataata agtttgtaaa taaaaaccca aattctttaa aatataaata
    10621 ataacaagta gaaaaggtaa ggtatagagc aaggcctcat ttttttcaac aaaaatataa
    10681 tctaaaatag gctttaaaga tgcgaaactt ccagctgttc ctatactagt aagtatcatc
    10741 ccaaaaatag caatggcaaa ttctttcttg tattttttat aaaaaggctt aaaacggatt
    10801 aaaacatctt taagagtcat atctttatgc atttaaattt tctcccaaat cgttccttgc
    10861 ggcgtatctt gcaaagcaat gccaagcttg agcaagtctt ctctgatctg atctgctttg
    10921 gcaaaatctt tatttttctt agcttcgttt ctttgcaaaa tttgatcttg aattttttct
    10981 ttcaactctt tggcgacacc ccattgaaaa tataaatttt catccataaa accaaagcca
    11041 aaaattttag ccagttcgct taaagcttct ttgatttttt gttttaattc tttattttta
    11101 ctttgctgat caagctctaa atttgcatta gttataaact catctaaaag cgccaaagcc
    11161 ttagagatat ttaaatcatc acttaaaact tctaagattt gcttggcgat attgctatga
    11221 atctctatat catttaaaat tccaaaatct ggggtttttc ccacagcaag tcttttttta
    11281 agacgataaa acttatccaa gcgttttttt acattttcta aatcatctaa agaataatta
    11341 aaatgagctc tataatgaga acttaaaaga taaaatctta aagcctctcc cataaaatct
    11401 ttgagtgcat cttttaagaa aaagctattg tttaaacttt tgctcatctt ttctccattg
    11461 atttttacaa agccattgtg aagccaaatt tttgccaaag ttcttttgca cgcacaacga
    11521 cattgtgctg cctcattttc atgatgagga aataacaaat ccactccacc tgcatgtata
    11581 tcaagagtat cgccaaaaat agaatcaatc atagccacac attcagtatg ccaacctggt
    11641 cgcccttttc caaattcact atcataaaaa ttttcatcga atttccaaag aacaaaatca
    11701 ctctcatttc ttttttcaac ttcattactc agtcttgaaa cattttcttc tgtgttacga
    11761 tgagataagc ttagataatc ctcatctttg ctagtatcaa aatacactcc atcttctaaa
    11821 gtataagtaa agccattttt actaagctta tggataagat ctaacatagg ttctatataa
    11881 tatgtcgcac gaggtttaaa atcaggctct aaaacattta aagctttcat atctctttcg
    11941 taatttgcta tataaaactc aacaagctca tttaagctct taccgctttc actcattttt
    12001 tttaaaattt tatcgtctat atctgtataa tttctagcaa attgcaccct atagcccaaa
    12061 gaaagtaaaa ccctacgcaa caaatcaaaa caaacactgc ttctagcatg acccaaatgc
    12121 gcatcatcat acacagtagg tccacataaa taaatattga cattatcttg atcaagttcg
    12181 attttttctt ttaaaacgct atccattaat ttcatcaaaa cactccttta acactagcaa
    12241 cgatccacaa caaagcctct ataagataag gcttgatctc ataaagtaaa attgtaaaaa
    12301 caacaagtcc tgtaatcatt aaaaaacaaa atttaaaaga tattaaagca aaaaagttct
    12361 taaaaccaaa ttctttgata ttggcaataa gcaaataaaa agcacttaaa gagcttgaaa
    12421 gcgccacagc tataaccttt aaactctcat ctttgattaa aaaaataaaa agcacagagc
    12481 ataaagcact aataagcaaa gctttaaagg cgataaaagc ggctgttttt tgtttgaatt
    12541 tagcataaag ccataaagaa aataattttt gtaagccaaa aggcaaaagc cctatcaaat
    12601 aagcgattaa aacataagct gtgataatac tatcttcgtg agtaaaattc cctctttcaa
    12661 ataaaagctt tgaaatttct aaagcaaata cagaacctac gatacttgaa acaatcaaca
    12721 aaatacttaa aaccgctaaa gctctttgca taaaacttaa ggctaaattt tcttgatcgc
    12781 tttttaaatg ctttaaaatt ttaggaaaag aaacttgagt taaggctata gcaaaaagag
    12841 ctaaaggaag ctgaaaaacg cggtttgcat aataaagata agaaatacta cccgtcatta
    12901 aaaaactcgc tattgtcgta tcaagcaaag agcttatttg tgtagcagaa gagcctaaaa
    12961 ctccatgaaa aaaattgcta taaaaaccct ctagtttagc ctttgctcgt ctaaatttca
    13021 cacttaatgc catagcgcgt atcacaggat tttttcgcaa caccattaaa tgcaaaatca
    13081 attgtgccac accgcttaat acagtcgcat aagaaaaata ataaagcgta tcttgaggag
    13141 catctttatc aacaaaaaat gcggctataa ctatacttag attaaacaaa gctgccgaaa
    13201 aagaagtgat gaaaaatttt tgtctataat ttaaaatcgc tcctaaaaag gtaaccaaaa
    13261 aaataaaaaa caaataccaa aaattaatcg ccaccaaagg agaggctaaa gctatagtat
    13321 cggaactaaa cccaaaagca aaaagcttgg taaaaaatga agaaaaaaag cttactaaaa
    13381 gacaaaataa aaacactata acactaaatt gatacatcac actcacgcaa aaagcgcctt
    13441 ttttctttgc tttgacaaag ttaggtaaaa agctttgccc aaacgcccct tcagcgaaaa
    13501 ttcttctaaa aaaggcaggc atttttaatg ctacaaaaaa aatatcacta taaattccag
    13561 cccccaaaaa aagagcgatt aaaacatcac gcgctagacc caaaacgcga gaaaataaaa
    13621 ttcctaaagc attgataata aaatttttaa acactaaact cttcataaac tttcacaaaa
    13681 tttcaaatat aaaagctatc attttaacta aatttgatta aaaattgact ataatattga
    13741 atttaaatta aacaataaag gggaaagttt tggctttaga tgagaaaatc atttcctata
    13801 ctgaaaatcc ttctcgcgaa cttttatctg tagcttcaag aactaatatc gctttaaatg
    13861 aacttgattt tcatctttta gctttttcga cacaatattg tcttgaaaat accgaatgga
    13921 taaaaattgc tgaaaaagat ctcactcttt ttgaaaaaga tgaagtattt ttaaaagagg
    13981 atttgcaaat caaacaagag tacaaaatcg aaatttttca tcaaacacgc caagataaaa
    14041 ccgcaaatgc tatcaagctg attgctaata aaaatttaac aaaaattgtc gctcaaatca
    14101 attttaatga gttaaaatat catgaaaaat taacttttga acttttgcaa attatctaca
    14161 aaaaaatgtt aaagcttaag tttttaatag gcattcgtat ctttgatttt aaaaaagaac
    14221 tcatccgtat atgcaatgaa cacaagaaaa atactttaaa taaaaccttg caaatcaatg
    14281 tagccaaagg tgttgaacct atacaaagcc aagatgaagc cttagttttg ctttataaag
    14341 aaaaggctaa agattatact atagatgaaa aacgctcggg tattatagca gttgatgaaa
    14401 atgaagttgt attaagatat aacaaattca agcaaggcaa agaaggaaaa gacttaaatt
    14461 tacatacttt aaaagttata gatgctaatc aaaacaaaat caaatttaac tgctcctcat
    14521 tagcatttaa gactgtagaa tacgaagatt acacagaata tttggcgcta aaaaagggtt
    14581 atgtagttga agatcaagat aaatttgata ttgcaaactt gcttgaattt aataataaag
    14641 ttgattttaa aaatataggc ataatccgcg caggattgga taaaaatgta aaaataaata
    14701 tcaaatttat atccgatatg caagatgctg ttaattcagg tgtaggaata gaatgcgaag
    14761 aactcaatat cacaggaagc gttggaagca atacaaattt aaaagctaca agaatgagag
    14821 ttgaaggcac cacgcacaca aaatctaaaa tttatgccaa agaagcctat ataaaaacac
    14881 atcgcggttt tgctcaagca gacaaactaa acatagatct cttagagggt ggcaatataa
    14941 aagccaagga agtaaggatt aaaaaaagct taggtggagt gatagaagca gatagaattt
    15001 atatagaaca attagaaagc aataattcat gtgtgtttta caataatgtt gtcatagaac
    15061 gctttgaagg tgaaaataat aaatttcata ctaaaataaa aaaaatggat aaagactacg
    15121 atcaagaact tttaaaaata aagaatgaaa tttcatctct tcatcataaa ataagcaaac
    15181 tcaaacaata cattctatca aacaaaaaca atgttttaga tatagaaaaa aaagtcttag
    15241 agcttaaaaa tcaaggacaa aatataccaa gccaatatga aaaattttta aaaaatttct
    15301 ctatacaaaa tgcaaactta aataaacttc aaaaccaaga aaaagaactt ttagaatata
    15361 gaaaaaaaat ccacgatgag cttttagcac tagaagagga tttatttaaa gctaaattta
    15421 tcaacaaaag tggaaaatgg agcgatatga atgaaatcag attttcgctt ttagaaccta
    15481 aagaagatat tttttattct tcttccacta aagaaagtgc aaaatttata gctttgaaaa
    15541 aaatcataca aaataatcaa gaatatatag agattgataa aaaacttgac tatgaagaaa
    15601 aggatataga atggttgttg ccatcgaagg aataatcaca aaaaaagaac ccacttttgc
    15661 tatcataaaa tgcgctagtg gtttaagcta tggggttttt atctcacttt tttgtgctgc
    15721 taagcttgaa actcatcaaa aatacgagct tttcatcact caaatcatca aagaggattc
    15781 taataaattc tatggttttt tagataaaga tgagcaaaaa atgtttgaaa tgcttttaaa
    15841 agtaaatgga gtgggcgcaa gcactgcgat ggctatatgc tcaagtttgg atgtaaattc
    15901 tttttataag gctttaaatt tgggagatga gagtgtactt aaaaaagttc caggcattgg
    15961 tccaaaaagc gccaaacgca tcatcgtaga acttggagat gccaaagtcc aactcgaaag
    16021 tgtgagcgat gataaaagcg aagccttggc tgctttgctt tctttgggat ttaaacaaga
    16081 taaaatatta agcgttttaa gtacttgcaa cggaaaagat acaagcgaac ttatcaaaga
    16141 agcactaaaa aaactagcat aaggaaaaat aatgaaatta gcgatacttt ttggcggaaa
    16201 ttcttacgaa catgaaatca gcattgtaag tgctgtggta ttaaaaaaag tgataaatac
    16261 ggatttgaca tttatttttt gcgatgaaaa aaggagattt tatttaattc ctagcgaaaa
    16321 aatgaattct aaaaccttta gcggtggtgc ttaccaaaaa gaaaaggagt tatttttaag
    16381 acaaaaggct ttttatcata aaagtctatg gagtgaaaaa aacttagatt tagattgtgt
    16441 gatcaacctc atccacggaa gagatggaga agacggaaag atagcttctt tgcttgaatt
    16501 ttttgatatc aaattcatag gtcctagggt tgaagcaagt gttttatctt tcaataaaga
    16561 gttcacaaaa ctttacgcac aaagcgttgg ggttaaaact ctagattatc aaatgcttag
    16621 aaaaagtcaa aagcaagatt ttacagctca ttttccttgc attttaaagc ctgcacgact
    16681 tgggagcagt atagggatta gcatagctaa aaatgaaaag gaattggatt atgctaagga
    16741 tgtgggtttt gagtttgata ctgatatttt ggtagaggat tttaaaagta acatcaaaga
    16801 gtacaatctt gcaggatgta tgatcaaaga tgaatttatc ttttcaatca tcgaagaacc
    16861 aaagaaaaaa gaatttttga attttgagca aaaatatctt agtttttcag gccataacga
    16921 acttatcgaa gctgatttga gcgaagaatt aaagcaaaag cttaaagata attttgccaa
    16981 aatttataat cctttattta aaggtgcttt aatccgttgt gattttttca tcctagataa
    17041 tgaagtttat ctgaatgaaa tcaatccaaa tccaggctct ttagcaaatt atcttttcaa
    17101 agattttaac aaaattatag agcaacttgc tctaagtata gaaagcgaaa agaagattaa
    17161 aatcacttat gaatttttac attctattaa tggacaaaaa ggcaaattat aaagctttaa
    17221 gagaaagtat gttaaatttt acataaaatt ttatgtattt taggaaaatt tatgctttct
    17281 tttaaacaag atgaaatcta taccgccaca gaagttgtgc gaaactttag ccctttgatc
    17341 gaaaaactaa aaaaaagcga atcgggcaaa atggtcatct taaaaaataa taaatttgag
    17401 gccgttttgc tcagtatgaa agaatttgaa cgcttgcaaa atgctatgca actcttagaa
    17461 aatatttaca aaaaccaaaa ggtttaagat ggcgcttgta aatgtgattt ataataatga
    17521 tacttatgaa ttaagttatg aaattttaaa tcaagataag aaaaaatctt tactcatatt
    17581 gcatggatgg ggtgcaaata aggagcttat gaagcaagct ttttctaaaa atttaaatga
    17641 tttttgtcaa atttatctag atttacctgg ttttggaaat tcaagtgcgc caaaaagtct
    17701 ttatagtcaa gattatgtaa atatcataaa agaattttta aaagaaaaaa aacttgatat
    17761 tgatattttt ctaggacatt cttttggtgg aaaaatagct gctttacttg ttttggattt
    17821 tcaaaaagct caacttgttt tgctttcaaa ttcaggcata cttgcaaaaa aatcttttaa
    17881 agtgcgtttt aaaatcatgc tgtttaaatt tctaaaaaaa ttgggtttgg gtagatttta
    17941 tcgttatttt gcaagcaaag atggagcaaa tttaaaccct ttgatgtatc aaacttttaa
    18001 aaatgtagta gatgaagatc tgagtcaaac ttttgctaaa atcgacaata aaagccttat
    18061 tttttggggg attgatgata aagccacccc tttaaaaagc ggagaagcaa tgcacaagct
    18121 tatcaaaaat agcgaatttt atcctttaga aggggatcat tttttctttt taaaacattc
    18181 tttatttata gccaataaaa tcaaggaaaa ccaatgctaa ccaatacact ttattttatc
    18241 aattctttgt tttttaattt ttgtgtagct ttttatctta tgagcgcttt acaatggtat
    18301 tcttataaat ttaaacgcgt attttttcac tatcatagac ctttgtggca tttgtatttt
    18361 ttatttttac cttatttttt ctttttgact tttcctttat attctttggc gtattttgca
    18421 cttattcata ctccgatttt atatttttgg aataaaagca tagataaaaa actcgtcttt
    18481 acaagtaagg ttaaatggtt ttttgttttc gtatttattt acaataccct ttttgccata
    18541 cttgctttgc gtttttcttt tctttttaat ctttttgccc tgccttttgc tcttataagt
    18601 cttaaaatct ttgagctatt tagcaattta tattttaaaa ataaagccaa agccaaactt
    18661 caaaacaatc cacaattaaa aatcatactc attactgcaa gttttggaaa aacaaatatt
    18721 aaaaatttcc tctatgagct tttaaaagat gattttaaaa cctacaaaac ccctcgctct
    18781 gtaaataccc tacttggcat tatcgcagat atcaatacaa atttaagcga tgatacacaa
    18841 atttacatag cagaagcagg agcaagagta aaaggcgata ttgatgttat aacgcgtttt
    18901 ttagagcctc aaatttgcat tgtaggagag ataggaaatg cgcatttaga gtattttaaa
    18961 aatatagaaa atacgcgaaa aaccaaactc gaagctttaa attccaaaag attagaaaaa
    19021 gcttttttac atactagcac ccaaaaaagc gaagatgagc ttatcttgct ttacgatgat
    19081 aaattacaag acattcaagc aagtcttcaa ggtttggaat ttaagatcaa tttagaaaat
    19141 aaaacatatg aatttaaaag ccaaattcta ggagatttta atgctcaaaa tctttgcgct
    19201 tgtatacttt gtgcaaatta tctaggcgta aaaatagaaa aaattcaaaa gcaagtttta
    19261 aaaatcaatt cagtagaaca tcgcttacaa atcatctcta aagagcctaa attcatcatc
    19321 gatgatggtt ttaatggaaa ttataaaggt atgagtgcaa gctataagct ttgcaaaaac
    19381 tataaagggc gcaaggtttt agttagccct ggtatagtag aagtagataa ggatgaaaat
    19441 gtaaaattag ccaaaatcat caatgaatgc tttgatcttg ccgtcatcac agcacaggtt
    19501 aatgctgata tctttaaaaa agaacttaaa ataaaaacca tcatactcaa agaaaaagca
    19561 gatcttgtta aggttttagc aaaagaaacc caacaaggcg atttgatact tttttctaat
    19621 gatgcaccta gttttatgta agtttatctt gtgaataatt ttaaagataa agatatttaa
    19681 gaaagatttc taattcttat cttaaatcat cttctatttt attgttagaa ttttatgata
    19741 aaatcaatgc cacttttata aagttttcat aaatttagga gtaaattata tgcaaaaaaa
    19801 ttctttttta aaaatctatg ggctcatacc ctttttgctt gtagctttca tcaatgcttt
    19861 tgtagattta gggcataaaa tcatcattca aaatactatt tataaggttt atgaaggtag
    19921 cacacagctt cttttaacag ccattgttaa tgctcttatc cttctacctt ttattttaat
    19981 gctttcaccc tcaggatttt tagcagacaa atatccaaaa aatcttatca tgaaactctc
    20041 agcagctttt agcgttatgc ttacgattat catttgtata agctattata atggggcttt
    20101 ttggacagct tttacactta ctttcatcat gggaattcaa gctgcacttt attctcctag
    20161 caaatacggc tttattaaag aattagtcgg aaaagattta cttgcgatgg gaaatggtgc
    20221 agttaatgca gtaagcatcg tggctatact agctggaatg agtctttttt ctttaagttt
    20281 tgaaagctta tatgatataa atcataacag ctcagaagag gttttaaagc aagttgcacc
    20341 tttgggattt ttacttatac ttttttcact catagagctt tacttagcgt ggcgtttacc
    20401 taaacttaaa gatgagataa aagaattaaa atttgattct aaacgctatt tgagcggaaa
    20461 attgttgatg agcaatttaa aacttatttt tgaaaataaa gtaatttggc tttgtatcgt
    20521 tggaatttcg atattttggg cgatatcgca attatatctt gtaagttttc ccgtatttag
    20581 taaaaatgaa ctttttattg aaaatacttt ttttgtacaa gtttctttag gattttcagg
    20641 gattggagtc gttttaggct ctttaatagc gggtaggttt tctaaaaatt atatcgagct
    20701 tggactcatt ccttttgggg ctttgggcgt gtttttaatg gccttgatta tgccctattt
    20761 tacaagtttg attacatata gttttatctt ttttatcttt ggtttttgcg gtgcgttatt
    20821 tatcatacct ttaaattctc ttatacaatt tcatgcaaaa gaaaatgaac tgggtaaaat
    20881 tttagcaggc aataacttca tacaaaatat cgccatgctt acttttcttg ttttggcaac
    20941 tttatttgcc aatttagaaa tcaatgtaat ttatttattt tacttcatta cacttgttgc
    21001 ttttttgggt gcgatttatg tagtctttaa actccctttt tctttagtaa gaatgctttt
    21061 aagcatagca tttttaggac gctatcgttt gcttgtggaa ggctttaaaa atatccctga
    21121 aaaaggcggt gccttgcttt tgggcaatca tatttctttt atcgattggg ctatagtgca
    21181 aatggcaatt cctagaaaaa tttattttgt catggagcga agtatttatt ctaaatggta
    21241 tatcaaaatt tttcttgata aatttggtgt cattcctgtt tcaagtgcag caagcaaggc
    21301 tagcttagag cttattgcag agcgtattaa acaaggggat ttggtttgtc tttttcctga
    21361 aggcgtgctt tcaagacatg ggcaactcaa tgaatttaaa ggtggatttg aatatgtttg
    21421 ctcaaattta gaagaagatg atggggtgat tttacctttt tatatacgcg gactttgggg
    21481 tagcactttt tcaagaagtg atgaggagtt ttcagctaga aatcgcacct taagcaaaag
    21541 aaatatcgct atagcctttg gtgctcctat gtctttacat tctaaaaaag aagaggtaaa
    21601 agctaaagtt tttgaacttt cttttatggc ttggaaatct caatgcgaag caatgcatac
    21661 catagcaaga gcttttatca ccagcgctaa gagaaatctt agtaatatag ctataatcga
    21721 ctctttagca ggagcgatta gctatagaaa attattgagt cttagtttta ttttaagcac
    21781 ccttataaaa gaaaattcaa aaaaaatcaa tagcaatttt gaacgcggat cttatgcgcc
    21841 caaagaagaa tgtgtaggaa ttttacttcc tgcttctttt gctagttctt tgctaaattt
    21901 aagtgtcttg cttgcacaaa aagttgtagt aaatttaaat tttactgcgg gagaaaaagc
    21961 cttacaagca gcagtaaaaa gtgctcaaat ttcacaaatt tatacttcta agaaattctt
    22021 agaaaaatta gaaagcaaag gcgtgtcttt aaattttggt gaagaagtaa atcttatcta
    22081 catggaagat gtggttgaaa tctttaaaaa acaaaaaagt aaaattttag caatgatgat
    22141 ggcagttagt attttaccta gctttatatt aaaagcgatc tttgctcctt ctaaaaacaa
    22201 tcttgccata gcagctattc tttttagcag tggtagcgaa ggcactccaa aaggcgtaat
    22261 gttaaataac cgaaatatcc taagcaatat cgctcaaatt tcagatgtgc tttgcacaag
    22321 aaacaacgat gtaatacttt catccttgcc accttttcat gcttttgggc taactgttac
    22381 tacattttta cctttacttg aaagtattaa aagcattact tttgctgatc caaccgatgc
    22441 tttaggcata gcaaaagctg tagccaaaaa caatgttacg ataatgtgtg gaacctcgac
    22501 cttcttagga atttacgcta gaaataaaaa gcttgatgcc attatgtttg aaagcttaag
    22561 agtggttgtt tcaggagctg aaaagcttaa aagcgaagtt cgatctgcct ttgaaatgaa
    22621 atttaaaaag agtatttttg agggctatgg agcgactgaa accactcctg ttgcaagcgt
    22681 gaatttgcct aatcgctttg atgcggatta ttggatagtt caccgcgcaa gcaaagaagg
    22741 aagtgtgggc atgcctctac ctggaactgc agttcgcatt gtcgatccta atacttacga
    22801 aactctaaaa acaaatgaag atgggctgat actcataggc ggacaccaag tcatggtagg
    22861 atatcttaac aacaaagaaa aaaccgatga agtcatcaaa gaaatcgatg gcataagatg
    22921 gtataacacc ggcgataaag ggcatttaga tgaagatgga tttttgtata tcgtagatcg
    22981 ttattcgcgt tttgcgaaaa tcggtggaga gatgatatct ttaggtgctc tagaagaaga
    23041 aatcgctaaa ttcatcgata caaatatagt gaaattttgc accgtagctt tagaagatga
    23101 gaaaaaaggc gaacaagttg ccttgcttat agaatgtgat gaagaattct ttgaaggtgt
    23161 ttgcgaagct ataaaaagct caagtatgcc tgctattttc aagccaagtc gctatctaaa
    23221 agtagaaaaa attccacttt taggctctgg aaaagtggac ttaaaaggcg ctaaggaatt
    23281 agcaaaaagc ttggtttaaa ataataaatt tttagcaaag agataaatac tctttgcttt
    23341 tttaattttt tcttataatt ctttcatata tttaaattta cgccaaagcc caaactaaaa
    23401 ttggcataga aataaaagca aaaagcactc caaaagccac agtacttaca gctagattgc
    23461 tatctaattt agccttcatt accatagctc ctgctaaagt cattgtaggc gtggcacttt
    23521 ctatgatggc aactatgatt gaagctttca tttcaaaacc aaaaagcttt aataaaagca
    23581 caaaaattaa aggtgctaaa accattttag ctaaaatcac aagaatagta ggtttataag
    23641 cagttttaat cgccataaaa ccaagcccca aacctatggc aaaaagtgcc actggagtag
    23701 ctgcaccacc aaataaacga ataggggaaa aaataaattc aggcaaggat attaatttac
    23761 acaaaaaacc caaaagcaaa gccaaaaaag gtggaaaaga aagaattttt ttaatatttg
    23821 ctaccaaact tactttttca ccacttccca aagaaaggat aaaaggcccc aaaagagaaa
    23881 taggcaaagt agtagctaaa gcatcatata gtattacttc tgcgccaaat tgcgcattag
    23941 caaaaatgcc ttcaacgata ggcataccca caaaaatagt atttccaaag caagagagta
    24001 aaaacatact cactagtgtt gcttttgaaa aattaaaaat aaaacctaaa aatacgacta
    24061 taaaagcagc aagagcacaa ctaaaaaatc ctataaatat caaaacaatc aaagagaaat
    24121 caaaatttaa atgataagct ttatcgaaaa ttaaacaagg caaagcaaaa acgatagcaa
    24181 aatctaaaaa ggttcttgct tgtttttgtt ttaagatacc cactctttta gcaaaatacc
    24241 cacctgctag taagataaaa atcgtaaaca aaggactaaa aataaacata ccatatcctc
    24301 ttcttgtttc attacttata aagataattt taaaaatgga aaaaatta
//
LOCUS       DBBXOW010000019        24151 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.019, whole genome shotgun sequence.
ACCESSION   DBBXOW010000019 DBBXOW010000000
VERSION     DBBXOW010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24151
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.019"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            294..2075
                     /locus_tag="ACJE1S_000741"
     CDS             294..2075
                     /locus_tag="ACJE1S_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HGG0806306.1"
                     /translation="MQRRVFLKGSALGSMVAFFGGSNLSAAVLKDKELLGFKAVSAST
                     KDEVIVPEGYEAKVLISWGDPLFSKAKAYDESKNIDMNAVDNARFVFGDNNDGMSFFS
                     LSKNRGILAINNEYINPEIMFNHQGKNLSKEDVLYEQASVGVSVLEIQKKGNEWAVVL
                     DSKYNRRIDANTKMEVSGAAKKEVLKDKKFAYGTFANCANGQTPWGTYISCEENFDDY
                     FGSSDENLKFDENFKRYGFKTKSEYGWEKFDERFDLAKNLDEANRFGWIVEINPFDAK
                     STPIKRTALGRFKHENAEFIVEKDGLVIVYMGDDEIDEFIYKFVSKHKYVKGGDTSKI
                     LDEGTLYVGQFNGNVGDFRGSGKWIALEYGKNGLDESKGFKSQADILINTRLAASVVG
                     ATPMDRCEWIASHKESGSREVFATLTNNKNRTQANAANPRTKNLYGQILKWIPKNSHK
                     DDEFTWEIFTLVGNPDNQKGLNKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KGEYAGMGNNCMLAANPKTGEIKRFLTGPIACEITGIAFDEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSIVMIRKLDGGVIGA"
     gene            complement(2200..3138)
                     /gene="trxB"
                     /locus_tag="ACJE1S_000742"
     CDS             complement(2200..3138)
                     /gene="trxB"
                     /locus_tag="ACJE1S_000742"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HGG0806307.1"
                     /translation="MLDVAIIGGGPAGLSAGLYTTRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQISKNEDGSFTIRLEGGKTE
                     LAKAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIELITSASIDEVYGDKMGVAGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCDMEEGGQVSVNLKMQTNVPGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3274..3588)
                     /gene="trxA"
                     /locus_tag="ACJE1S_000743"
     CDS             complement(3274..3588)
                     /gene="trxA"
                     /locus_tag="ACJE1S_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HGG0806308.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3643..3981)
                     /locus_tag="ACJE1S_000744"
     CDS             complement(3643..3981)
                     /locus_tag="ACJE1S_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HGG0806309.1"
                     /translation="MGFASYLSGILGEDKACDFLKKQKFEILKRNFRSKFGEIDIIAK
                     KDGILHFIEVKFTQNNYEVSERLNVKKYEKILKTIEFYELKHGILDDFQMDLICISDD
                     MIQFFENISF"
     gene            complement(3981..5231)
                     /locus_tag="ACJE1S_000745"
     CDS             complement(3981..5231)
                     /locus_tag="ACJE1S_000745"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HGG0806310.1"
                     /translation="MKVAILGYGVVGSAVARVLIQNKEIIRARCGQDIIPVVALAKSQ
                     KENALIPIVTNVDEILQRDDIDVFVELMGGVETPFKIISEILKKNKPVVTANKAMLAY
                     HRYELEELAKNTTFGYEASVAGGIPIIKALKEGLSANNILSIEGILNGTSNYILSAMN
                     SKGLNFDDVLKKAQELGYAEADPTFDIEGQDAAHKLLILASIAYGLRAKPEDILIEGI
                     SKISAEDMYFAKEFDFTIKLLGIAKAQNSIVELRVHPTMISKDKMIAKVDGVMNAISI
                     VSDILGESLYYGAGAGGNATASAVIADLMDIARNEPKGPMMGFENNLNFKLLNRDEIY
                     TKYYLRLKVEDKTGVLSKITQLMSENNISIDSFLQKPKQGETYSTLFFTTHHTFEKSI
                     QNLLSILEKQDFIKAKPFMMRIEE"
     gene            complement(5233..6438)
                     /locus_tag="ACJE1S_000746"
     CDS             complement(5233..6438)
                     /locus_tag="ACJE1S_000746"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HGG0806311.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGKDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYGVNLDPESEVVATM
                     GSKEGFVNLARAIINPGDVAIVPAPAYPIHTQAFIIAGGNVAKMPLKYNEKFELDENK
                     FFEDLDKTLHESIPRPKYVVVNFPHNPTTVTCEKSFYERLVATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEVEGAKDVAVETYTLSKSYNMAGWRVGFTVGNKRLVAALKKIKSW
                     FDYGMYTPIQVAATIALDGDQSCVDEIRATYDKRMHILLEAFENAGWKLHKPRASMFV
                     WAKLPESKMYLKSLEFSKQLLQHAEVAVSPGIGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKEE"
     gene            complement(6451..7257)
                     /locus_tag="ACJE1S_000747"
     CDS             complement(6451..7257)
                     /locus_tag="ACJE1S_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806312.1"
                     /translation="MVKKIFIFLFLANSVFAVSSLELVKNLVANPSKDSQLRLLFPSS
                     SYMDNKGNPDIAKISRILKTNSLINLTLPEPRTLKLNFKAKADSVVFFKILTDALTNL
                     GYIYFIPTDMILRDGNIDYTIQVESQYILDPGALYALLKDNSVYIDNIKRIGTYDYEY
                     DLNFENAQLNTNIDLKLNSTQALERPLKDYVFTLQGASNLMIDAHDADFWFPKVLFLD
                     KNLNLIKAVKSQAQNNHFSELIPSGAVYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(7251..8198)
                     /locus_tag="ACJE1S_000748"
     CDS             complement(7251..8198)
                     /locus_tag="ACJE1S_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806313.1"
                     /translation="MLNWKKIEDLNLKEVAARTKIELEFLEALVKKDFATLNRFNVRG
                     FVKILSREYELDFTDFNEEFETYLNENNLNDTTTKPKMITPKLDAYSQKSTSFVSFII
                     IVIIIALIGFGIYYFDYIKSFFQKDQNNSSAAVVDIIGKAQSNLKALENNVVVIDNQA
                     EENETEANLTQIQNTELNNTKEEIKQISTTPNNTNANEENLSTNDSLATTNQEVAEVS
                     KALNKEAHFKASGKIWIGLIDLSNYRKTSLVKENDFNLSLEVNRLVLTGAAALSVFDE
                     NGKEQKFPAGNSKRFLIKDGKITSISAAEFMKLNKGKEW"
     gene            complement(8191..8874)
                     /gene="rlmB"
                     /locus_tag="ACJE1S_000749"
     CDS             complement(8191..8874)
                     /gene="rlmB"
                     /locus_tag="ACJE1S_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HGG0806314.1"
                     /translation="MIVYGKQIFFYILERHKELINELYLAKECDKETFKKIASSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKEYEFKDLHTLKKGEFIAILYGISDVGNIGAIVR
                     TAYALGVDGLIFIGERLAMEGVIRTSSGAALDLEIALNNDIFTVLNELKQVGFKLFAS
                     ASGGKQIHHYKVDKGKKALILGSEGLGLSAKIIKKCDECVGIEMKNNFDSLNVSVAFA
                     ILCDRMINA"
     gene            complement(8887..9711)
                     /gene="rsmI"
                     /locus_tag="ACJE1S_000750"
     CDS             complement(8887..9711)
                     /gene="rsmI"
                     /locus_tag="ACJE1S_000750"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HGG0806315.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDIFFCEDTRVSKSLLSLL
                     SSKFEIDFGDKKFISFHTHNEKKVLENLDLEFFNQDIAFLSDAGMPGISDPGQFLIDF
                     ALENDIQFEVLPGANAALVALVSSALCEKEFIFMGFLANKGKERQKDIQKILNHPYPS
                     VIYESPKRILSLIEQIAILDSQREVFVIKEISKKFEAKFKGKAIDLFNELKQVNLKGE
                     WVVVLAKNDKDNISHSLCENDILELEIPLKTKSKLLAKMNGKNPKEIYQKLLLSQS"
     gene            complement(9714..9914)
                     /gene="rpmE"
                     /locus_tag="ACJE1S_000751"
     CDS             complement(9714..9914)
                     /gene="rpmE"
                     /locus_tag="ACJE1S_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HGG0806316.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFVTKSNKSELRVDICSSCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9993..10646)
                     /locus_tag="ACJE1S_000752"
     CDS             complement(9993..10646)
                     /locus_tag="ACJE1S_000752"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HGG0806317.1"
                     /translation="MQFLYHKQAGEEILKLKGEEFAHLKARRIKENEILSLRNLEDDF
                     IYEYKISNLDRNSCLLYFLHKHFKSHPQSELDLALAVIDTKILEKTLPFLNELGVKKL
                     HLVFTEFSQRNFKLDFERLEKIIISSCEQCGRSHKMQIQSYKNIQEFSKVFPDAVLVD
                     FEGEVKEFDKTRLYFIGPEGGFSPKEKQMFKEKICLKVPNILRSQSAAIAVAAKILL"
     gene            complement(10647..11054)
                     /locus_tag="ACJE1S_000753"
     CDS             complement(10647..11054)
                     /locus_tag="ACJE1S_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806318.1"
                     /translation="MDKSYEFFLALHLYSLYASGFLMFFYLVLTQGNFKTEFIFIRRI
                     RLFLPIYYVFLALMLFTGSLLLAIKQFQTHLNLWLMIFSWIFIFALAIFHFIQFKKAR
                     RLRRYITFRRISFMILFCELVLLILPFLTGKYL"
     gene            complement(11055..11477)
                     /locus_tag="ACJE1S_000754"
     CDS             complement(11055..11477)
                     /locus_tag="ACJE1S_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG0806319.1"
                     /translation="MGKNLSILISLFAVLFLNACSDDKEFNHKNQNTTEEIVQIEQND
                     EKTEFSDTNLPLPVDDEASISEDYDVNPSVINSLYKQKCATCHGEKGEVKTKKGIAIK
                     NLSSEKFIQRLQNLKDEAHNFLTQEQRENLAKYISKEK"
     gene            complement(11477..12058)
                     /locus_tag="ACJE1S_000755"
     CDS             complement(11477..12058)
                     /locus_tag="ACJE1S_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-pyruvoyl tetrahydropterin synthase family
                     protein"
                     /protein_id="HGG0806320.1"
                     /translation="MIIRKLFEFENAHIVRFCSSSRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTHMRQIIDSFDHAITLFNQDDESYLNEMKKYSQRWISLPVNVSAEN
                     FCRVFFILIDALLKQTKMINGEQGVNLQSIIVHETRTGYAQGFKEDAYSPTMPKITLE
                     DIEFSPAIKAEWNDIEFYDKLKNLHIFTNPKEV"
     gene            complement(12055..12798)
                     /locus_tag="ACJE1S_000756"
     CDS             complement(12055..12798)
                     /locus_tag="ACJE1S_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HGG0806321.1"
                     /translation="MQLVESFLSIQGEGKYSGKLAIFMRFAGCNFNCSGFGVKLIKNG
                     KTLKGCDTIRAVFTKEFNEEYEILNASELFKRVLDLKKDFNPIVVITGGEPLIHHENP
                     EFIDFIQALLKNNFEVHFESNGSIELDFEKYPFYKECVFALSVKLQNSGMGKEKRLNF
                     NALKGFKHYAKDSFYKFVLNSSQLESLSLEILEILEKAPNEIFCMPMGENEQNLKQNA
                     LKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12801..13763)
                     /gene="moaA"
                     /locus_tag="ACJE1S_000757"
     CDS             complement(12801..13763)
                     /gene="moaA"
                     /locus_tag="ACJE1S_000757"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HGG0806322.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFNHQPKENLLS
                     FEELFLFVKVAIDEGIEKIRITGGEPLLRKDLSVFIKMINDYKKDLDLAITTNGFLLK
                     DFAKDLKDAGLKRLNISLDTLESKKAKILAQKDVLDSVLAGIDEALSVGLKVKLNTVV
                     LKGLNDDELIPLLEFAKSKNIQIRFIEFMENIHAYGKLQGLKRDEIIQILSQKYQVKL
                     IKKAEKAPVSIYSADGYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDINAAANILQEVLRNKPEKNRWSVVDNETSSRAFYQTGG"
     gene            complement(13779..14297)
                     /locus_tag="ACJE1S_000758"
     CDS             complement(13779..14297)
                     /locus_tag="ACJE1S_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806323.1"
                     /translation="MSNDVLYLVFMIVLLVAILAYMNIKDKESSAKINKLQGVVEDIT
                     KELHYLRKELGVKDEGDQEEEDYKITLLKEEIQITLEKQISAKITPVLRTLKTMEHII
                     EDFQNEQQNRILNLEQKAQSMTKLTPNYDTEEQKIVDLFKEGKSIEQIAKDLRIGTGN
                     VELVLKFKQLIK"
     gene            complement(14290..14790)
                     /locus_tag="ACJE1S_000759"
     CDS             complement(14290..14790)
                     /locus_tag="ACJE1S_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806324.1"
                     /translation="MEISLFKAGFEASLECCDIENNHFLQEYLKLGAISQLSKWKKLA
                     LRVDFDEGEKIIFDLLLSLKEDILRLEDSLDKNKDLLVLKQKGVVESLNFEYLNFLDE
                     ILEEGKEYYIRFDLNNQKMAIFAKAQNKKLAQIIKIKPEDRIAFDAFVVQLQRDMIRN
                     KKDKNE"
     gene            complement(14781..15665)
                     /gene="mqnP"
                     /locus_tag="ACJE1S_000760"
     CDS             complement(14781..15665)
                     /gene="mqnP"
                     /locus_tag="ACJE1S_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis prenyltransferase MqnP"
                     /protein_id="HGG0806325.1"
                     /translation="MNTIWNKFKDILELVVFKHSIFALPFLFSSMIVASKLVNDSAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIIL
                     NAIIFILCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     VMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKVGLHSIPAKFGSKATLFISAF
                     CHVLAVLFWLLFVWQVWGVALGNIALFGVIISGIILAFEHKIVHKNFAHIDKAFFTLN
                     GYLSIIFFIFIWVDLVWK"
     gene            15737..16606
                     /gene="miaA"
                     /locus_tag="ACJE1S_000761"
     CDS             15737..16606
                     /gene="miaA"
                     /locus_tag="ACJE1S_000761"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HGG0806326.1"
                     /translation="MFFQIALIGTTASGKTYIANALAKEFNAVVLSLDSLCVYKEINI
                     ANAKPSKDELANLNYFGVNLLSVDEHFNVELFIREYQKAKEFALINDLPLIIVGGTGF
                     YLKTMIDGLSQKIQDTTSTLSNDEIYALLLKIDPAYKIEKNDTYRLKKWLSIYESTNE
                     IPSDFLKKTQKDGVLKDIEIYELVWDREILRKRIEARTKEMIDNGLIEEARMLFSNFD
                     NNLKALNSIGLKECKEYLENQISLKELESLISIHTSQLAKRQRTFNKKFQSTPLEFSK
                     ALELLRNKFLAKE"
     gene            complement(16592..17155)
                     /locus_tag="ACJE1S_000762"
     CDS             complement(16592..17155)
                     /locus_tag="ACJE1S_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HGG0806327.1"
                     /translation="MDFYSLILLSCALAMDAFAVSLCKGFSVKKLNLKHYIITGVYFG
                     GFQALMPAIGYAIGITFASFIASIDHWIAFVLLSLIGLKMIKESFENENCDTNSNQFG
                     FKIMFALAVATSVDALAIGVSFAFLDVDLFLALFLIGSITFILCAIALELGNKFGTRF
                     RNKAEFLGGAVLIILGIKILVEHLFFS"
     gene            17328..17402
                     /locus_tag="ACJE1S_000763"
     tRNA            17328..17402
                     /locus_tag="ACJE1S_000763"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17361..17363,aa:Glu,seq:ttc)
     gene            17564..17971
                     /locus_tag="ACJE1S_000764"
     CDS             17564..17971
                     /locus_tag="ACJE1S_000764"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HGG0806328.1"
                     /translation="MSHDTNFFLLYFKDKIPKDSLIFLKESLEKASEEQKEKLLFIKL
                     KNPLYGLLFAFLLPGLDRIYNGNIILGILKIISAILVSIGLIIAEDKNDESTMLIFIN
                     LFFILSVWVILDYFLVWKDICQNNLKKIFEVLQ"
     gene            18129..18395
                     /locus_tag="ACJE1S_000765"
     CDS             18129..18395
                     /locus_tag="ACJE1S_000765"
                     /inference="COORDINATES: protein motif:HMM:NF017007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HGG0806329.1"
                     /translation="MGLFGVDRFYKGDILLACIKLAFFIIPLFATFAAFIALLDESHS
                     IFIDYFAIFALMFVVASIWKLVDIYLVFVGIKKDNFHKILNFFS"
     gene            18501..19163
                     /gene="sodB"
                     /locus_tag="ACJE1S_000766"
     CDS             18501..19163
                     /gene="sodB"
                     /locus_tag="ACJE1S_000766"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HGG0806330.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFASKDLVSIIKSSSGGVFNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            complement(19190..20395)
                     /locus_tag="ACJE1S_000767"
     CDS             complement(19190..20395)
                     /locus_tag="ACJE1S_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HGG0806331.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     SFIKERLGVEIQTAQIDADDSDAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YVDTANYEHPDLAKFEYKEQWARNDKFKEAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWEKGEWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVM
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGIKDGKDRQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMDELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(20431..21339)
                     /locus_tag="ACJE1S_000768"
     CDS             complement(20431..21339)
                     /locus_tag="ACJE1S_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806332.1"
                     /translation="MMLEIKNLSKNFGKIQALKNINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAQLEQASSCEFLKCKGEVAMMFQNYALFPHLNVEKNILFALYDKKDKKQILEDL
                     LKTFEIENLRYKKIDEISGGQAQRVAFARAVARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKLIQKQKITAIMVTHDIEDAYCMSDKIAFLDKGEILAHADPKELYFKPNHKSARIL
                     PDLNIIEEELDLEDEFFQWIASKNYTFGYAELKIGNRFEATILQKEFLGAFYRLKVRY
                     KNIDFFMLLSSNYTLKEKINFDIINF"
     gene            complement(21323..22939)
                     /locus_tag="ACJE1S_000769"
     CDS             complement(21323..22939)
                     /locus_tag="ACJE1S_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806333.1"
                     /translation="MLKTLKYYKIGAILLALFLTLPIFGIFAELFYILFQNFNTSNLA
                     EISSIKENLSHFFDYLFLKFIKDTLIVSIGVLLLSLILGVSSAYLMANYNFYFCRILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHEVFGFRIDFFNHYGVIFVLGISLYPYIYL
                     FAKTAFKSEAIEAYEVAKIMGYSEFRIFSRIMLLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSILSGILMIFVFLIMYIDYYYKNKHHYSFNQNL
                     TLFIKKRKLSHIKQILACFYCFIIALLGFILPFIWLVYWGLKDFKLFEAEFYIISFQT
                     IILAFITALITTLLAYFLMFSSRIIKNNFFSLCILKLSSLGYSIPAAALGISMIVLFV
                     FLDKIFHLNLLGTSLIILVFAYIIRFLASAIYSLEGGYNKIHLNTDEASLNLRPSYLI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLLIVLLSLIVVIWMDKITRKDDVRN"
     gene            complement(22939..23943)
                     /locus_tag="ACJE1S_000770"
     CDS             complement(22939..23943)
                     /locus_tag="ACJE1S_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009881850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG0806334.1"
                     /translation="MKKIFSLCLLGFSLLGAAELNIYSARHYDADFQIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNSGLLSPVKSKYLEDTIP
                     AHLRDKDGEWFAITKRARIIAYNKNANTDISKMKNYEDLAKPEFKGQIVMRSATAPYS
                     KTLLASIIANDGDENAKVWAKGVLDNLATKPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQEAAKKFMEFMLTP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSQIAEKVKEAVKIYDQVGFR
                     "
     gene            complement(23944..24066)
                     /locus_tag="ACJE1S_000771"
     CDS             complement(23944..24066)
                     /locus_tag="ACJE1S_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806335.1"
                     /translation="MKKLVLFLFCLGFAFACSEHSNADFKDHDKTKYNSQYKDK"
BASE COUNT         8259 a         4061 c         3368 g         8463 t
ORIGIN      
        1 actaatatga aatattgatt ttacatatta gtttatatgt tggctaatat atacaattta
       61 gattgatatg caagtatcaa tctaaagatt ttgatttgtt gatactttta tttattactc
      121 attgatatct ttaattcatt attcaccaat acctagatag gttgggtgtt gatgaaattt
      181 atttacaaat tcttcttata tatttcttat cttacttatt tgaaagtttc taaaaagttt
      241 ccaaacattt ctatactttc attgttttaa tttcaatacg gagcagaaaa caaatgcaaa
      301 gaagagtatt tttaaaaggt tcagctttag gttctatggt ggcttttttt ggaggttcaa
      361 atttaagtgc tgcggtactt aaggataaag agttgttagg ttttaaagct gtaagtgcaa
      421 gcacaaaaga tgaagtcata gtgcctgagg gctacgaggc taaagttttg atatcgtggg
      481 gagatccact ttttagcaaa gcaaaagctt atgatgaaag taaaaatatc gatatgaatg
      541 cagtggataa tgctcgcttt gtttttggag ataataatga tggtatgagt tttttttcac
      601 tttcaaaaaa tagaggaatt ttagccataa ataatgaata cattaatcct gaaattatgt
      661 ttaatcatca gggtaaaaac ttgagcaaag aagatgtttt atatgagcaa gcaagtgtgg
      721 gtgtaagtgt attagaaatt caaaaaaagg gtaatgaatg ggctgtagtt ttggattcta
      781 aatacaatcg tagaattgat gcaaatacta aaatggaagt aagcggagca gctaaaaaag
      841 aagttttaaa agataaaaaa tttgcttatg gaacttttgc aaactgtgca aatggtcaaa
      901 ctccttgggg aacttatatt agctgtgaag aaaattttga tgattatttt ggaagttctg
      961 atgaaaattt aaaatttgat gaaaatttta agcgatatgg ctttaaaaca aaaagcgaat
     1021 acggctggga aaaatttgac gaaagatttg atctagctaa aaatttagat gaagcaaatc
     1081 gttttggttg gatagtagaa atcaatcctt ttgatgcaaa aagcactcca attaaaagaa
     1141 cagccttagg tcgctttaaa catgaaaacg cagaatttat agtagaaaaa gatggtttgg
     1201 ttatcgttta tatgggcgat gatgaaatcg atgagtttat ttataaattt gttagcaagc
     1261 acaaatatgt aaaaggtgga gatacaagta aaattttaga tgaaggaact ttgtatgtag
     1321 gccaatttaa tggcaatgta ggggatttta gaggcagtgg aaaatggata gctttagagt
     1381 atggtaaaaa cggcttagat gaaagtaaag gatttaaatc acaagctgat atacttatca
     1441 atacccgcct tgctgcaagt gtagtgggtg caactcctat ggatagatgc gagtggatag
     1501 caagccataa agaaagtggc tctagggaag tttttgctac tttaaccaat aacaaaaacc
     1561 gtacacaagc taatgcagct aatcctagaa caaaaaatct ttatgggcaa attttaaaat
     1621 ggataccaaa aaattcacac aaggatgatg aatttacttg ggaaattttt actcttgtgg
     1681 gcaatcctga taatcaaaaa ggtttaaaca aagggtcaaa taatatcact agtgaaaata
     1741 aatttaattc tcctgatgga cttaaatttg atagagatgg aagactttgg atacaaacag
     1801 atggttctta ttctaataaa ggcgaatatg cgggaatggg aaataattgt atgctagcgg
     1861 ccaatccaaa aacaggtgaa atcaaacgct ttttaacagg gcctatagct tgtgagataa
     1921 caggaattgc ttttgatgag gattatacta ctatgtttgt aggtatacaa catccaggag
     1981 aaggacttaa gggtagtact tttccttatg gaaaaacacc aagatcaagt atagtaatga
     2041 taagaaaact tgatggtgga gttataggag cttaattaaa gatctaaaga acttataata
     2101 atatctcttt tatcccaaag attaaataag atcaaaatta taagttcttc tttatttaga
     2161 ttgttttaag tcttaaaaaa tctaggacaa attcctagat taatgcaagc tttctatata
     2221 agccatagca ctaagcgctg ctacggctcc atcgcctgcg gcacaaataa cttgttttgg
     2281 agcatctttt ctaagatctc ctgctgcaaa aagcccagga acattagttt gcattttaag
     2341 attgacactt acttgcccgc cttcttccat atcgcatagg aattttccat catcttgttt
     2401 taaaatttca tttcttacat taagtcccac aaaggtgaaa attcctggca catttaaatc
     2461 tctaatgcta ccatctttta attttacttt cacgcctgca acacccattt tatcaccata
     2521 tacttcatct atgcttgcac tagtgataag ttcgattttt tcatttttct tcactttttc
     2581 tactgtagaa ggcgcagctc taaattcgtc cctacggtgg attagataaa ctttagagca
     2641 aatattggct agatataatg cttcttctaa agcagtatca ccaccaccta aaaccgctac
     2701 ttctttattt ttatagaaaa aaccatcaca agttgcacaa gtgcttacac ccttgccaaa
     2761 aaattcatcc tcacctttaa aacctgctct ttttggagca gaaccagtgc aaactatcac
     2821 tgcttttgca agttctgttt taccgccctc tagtctaatg gtaaaacttc catcttcatt
     2881 ttttgaaatt tgttctacac ctaccatttc atgctttaag ccaaaacgca tacattgctc
     2941 actccaaggt gccataaaag aaattccatc cataacttgt gcaacacctg gataattttc
     3001 aatttccgaa ctagaagtaa tttgccctcc tggcatccct ttttcaaaca ttactacatt
     3061 tttaagacca cccctagttg tgtaaagtcc agcactaagt cctgcaggtc ctccacctat
     3121 aattgctaca tctaacattc tttttccttt gtaatttgaa ttttattaag aatgatatac
     3181 aaattattct taatagtagt taataaaaat tattatttag tataaatttg aaatttttga
     3241 ataaaaggct agtaaaacca gccttgaaga tttttatagt aaagaattta atttatcgct
     3301 gattgcttgt tttgattgag caccaactaa ttgatctacc acttcaccat ttttaaagaa
     3361 gataagagta gggatagagc gaacgccaaa ttcagctgct aaatcgcctt gctcatctgt
     3421 atttacttta caaatttttg ctttaccgtc aaagtcattc gcaagttcat caattactgg
     3481 agcaagcatt ctgcaaggtc cacaccatgg agcccaaaaa tcaactaaag caacaccttc
     3541 ttttgcttgt gcaaaattat cacttgttaa ttcgatatat tttcccataa tttttccttt
     3601 cactaatttt tgtaattgta ttttattttt ttaaatatta gcttaaaaac tgatattttc
     3661 aaaaaattgt atcatatcat cactaataca gataagatcc atttgaaaat catctaaaat
     3721 cccatgtttt aattcataaa attctatagt ttttaaaatt ttttcatatt ttttaacatt
     3781 taagcgttca gaaacttcat aattattttg agtaaattta acctcgataa aatgtaaaat
     3841 tccatctttt ttcgcaatga tatcaatctc gccaaatttt gaacgaaaat tacgctttaa
     3901 aatttcaaat ttttgttttt ttaaaaaatc acaagcctta tcttcgccta aaattccact
     3961 aagatatgat gcaaatccca ttattcttct atgcgcatca taaaaggctt agccttgata
     4021 aaatcttgtt tttccaagat agaaagtaaa ttttgaatac ttttttcaaa ggtatgatga
     4081 gtggtaaaaa ataaagtgct gtaagtttca ccctgttttg gtttttgcaa aaagctgtct
     4141 atcgaaatat tattttcgct cataagttga gtaattttag ataaaactcc tgttttatct
     4201 tctactttta atcttaaata atattttgta taaatttcat ctctatttaa aagtttaaaa
     4261 tttaaattat tttcaaagcc catcatagga cccttgggtt catttcttgc tatatccata
     4321 agatcagcga taacagcact tgctgtagca tttcctcctg cacctgctcc ataataaaga
     4381 ctttcgccaa gtatatcact gactatgcta atagcattca tcaccccatc gacttttgct
     4441 atcattttat ctttactgat catagtagga tgcactctta attctactat ggaattttgg
     4501 gctttagcta tgcctaaaag cttgatagta aagtcaaatt cttttgcaaa atacatatct
     4561 tcagcagaaa ttttactgat accttcgatt aaaatatctt caggtttagc gcgtaaacca
     4621 taagcaatgc ttgctaaaat caaaagcttg tgcgcagcat cttgcccttc tatatcaaag
     4681 gtcggatctg cttctgcata accaagttct tgcgcttttt ttagcacatc atcaaaattt
     4741 aaacccttgc tattcatagc gcttaaaata taattgctcg tgccattgag tataccttca
     4801 atactcaaga tattatttgc gcttagtcct tcttttaaag ctttgataat aggaattccg
     4861 cccgcaacac ttgcttcata gccaaaagtt gtatttttag ctaactcttc aagctcatag
     4921 cgatgataag caagcatagc tttgtttgca gtgactacag gcttattttt tttaagaatt
     4981 tcactgataa ttttaaaagg tgtttcaacc ccacccatta attccacaaa aacatctata
     5041 tcatctcgtt gcaaaatttc atctacattt gtaacgatag gaatcagggc attttctttt
     5101 tggcttttag caagagcaac aacaggaatg atatcttgtc cgcatcttgc acgaatgatt
     5161 tctttatttt gaattaaaac acgagcaaca gcactcccta caaccccata tcctaaaata
     5221 gcaaccttca ttttattctt ctttcaagta ttttttaata ttgcgtgcag cttgacgaat
     5281 gcggttttca ttttctatta aagcaattct tacatactca tctccagctt caccaaaacc
     5341 aatacctgga ctcacagcta cttctgcgtg ctgcaaaagt tgtttagaaa attccaagct
     5401 ttttaaatac attttacttt caggcagttt tgcccaaaca aacatactag ctcttggttt
     5461 gtgaagtttc caacccgcat tttcaaatgc ttctagcaag atatgcattc ttttatcata
     5521 agtagcacga atttcatcta cacaactttg atccccatct aaagctatag tagcagctac
     5581 ttgtataggg gtatacatac cataatcaaa ccatgatttt atctttttaa gagcagctac
     5641 taagcgttta tttccaactg taaatcccac acgccaacct gccatattgt aagattttga
     5701 aagagtgtag gtttctacag caacatcttt tgcgccctct acttctaaaa tagaaggggt
     5761 tttataatca tcataagtta aatccgcata agcgatatcg gaaataatat aaaatcgctc
     5821 tttttttgca gttgcaacca atctttcata aaaacttttt tcacaagtta ccgttgttgg
     5881 attgtgtgga aaattaacca ctacatattt tggacgcgga atgctttcat gcagggtttt
     5941 atccaaatct tcaaagaatt tgttttcatc aagctcaaat ttttcattat atttaagagg
     6001 cattttagct acatttcctc ctgctatgat aaaagcttga gtatggatag gataagctgg
     6061 agctggcact atagccacat ctcctggatt gataatcgct cttgctaaat tgacaaaacc
     6121 ctctttagag cccatagtcg ctactacttc actttcagga tctaaattta ctccgtattt
     6181 tcttttatac caattgcaaa tagctaggcg aagtttataa atccccatag aggtagaata
     6241 ccccgaagtt ttgtctttat tggcgctttc acaaagttta tcaatgatat gttgaggggt
     6301 tttaccatcg ggatttccca tagaaaaatc gatgatatcc tttccagcac gccttgctgc
     6361 cattttgatc gcatttactt ctgcaaaaac ataatttgga agcctttcta tggtattgaa
     6421 acgaatttca tcaaacattt ctcttccttt ttattttttt agggtgattt ttaaacctct
     6481 tcggatattg tctaaactat acatatcact tacaattgca taaactgcac cgcttggaat
     6541 aagctctgaa aaatgattat tttgagcttg actcttgact gctttaataa gatttaaatt
     6601 tttatctaaa aataacactt taggaaacca aaaatcagca tcatgagcat caatcatcaa
     6661 atttgaagcc ccttgaagag taaatacata atctttaagc ggtctttcta aagcttgtgt
     6721 ggaattaagt tttaaatcaa tattagtatt aagctgagca ttttcaaaat ttaaatcata
     6781 ctcatagtca taagtaccta tgcgcttgat attgtctata taaactgaat tatcttttaa
     6841 aagagcgtat aaggcacctg gatctaaaat gtattgagat tctacttgta tggtatagtc
     6901 tatattgcca tcgcgtaaaa tcatatccgt aggaataaaa tatatatatc caagatttgt
     6961 aagtgcgtca gttaaaatct taaaaaatac aacagaatct gctttagctt taaaattaag
     7021 ctttaaagtt cgaggctctg gtagagttag gttgattaaa gaattggttt ttaaaattct
     7081 tgaaatttta gctatgtctg gattgccttt attatccata tagctggagc taggaaacaa
     7141 aagacgcaat tgagaatctt tagaaggatt agcaactaaa tttttcacta gctctaaact
     7201 agaaacagca aaaacagaat tagctaaaaa taaaaaaata aagatttttt ttaccattct
     7261 ttacctttat ttaacttcat aaattcagcc gccgaaatac ttgtaatttt tccatcttta
     7321 atcaaaaagc gctttgaatt tcctgcagga aatttttgtt cttttccatt ttcatcaaaa
     7381 acacttaaag ccgcagctcc tgttaaaacc aaacgattta cttctaaaga aagattaaaa
     7441 tcattttctt ttacaagact agtttttcta taatttgata aatcaatcaa acctatccaa
     7501 attttacccg aagctttaaa atgagcttct ttattgagag cttttgagac ttctgcaact
     7561 tcttgatttg ttgttgctaa agaatcattt gtgcttaaat tttcttcatt ggcatttgta
     7621 ttatttggtg tggtagaaat ttgttttatt tcttcttttg tattgttaag ttctgtattt
     7681 tgtatttgag ttaaattggc ttctgtttca ttttcttcag cttgattgtc aatcacaact
     7741 acattatttt ctaaagcttt tagattagat tgtgcttttc cgataatatc tacaacggcc
     7801 gcacttgagt tgttttgatc cttttgaaaa aaagatttaa tataatcaaa ataataaatc
     7861 ccaaaaccta taagtgctat aattataact ataattataa aagatacaaa actagttgac
     7921 ttttggctat aagcatctaa tttaggggtt atcatcttag gcttggtggt tgtatcgtta
     7981 agattatttt cattgagata ggtttcaaat tcttcattaa aatccgtaaa atcaagttcg
     8041 tattcacgac ttaaaatttt tacgaaacca cggacattaa aacgatttaa ggtggcaaaa
     8101 tcctttttaa ctaaagcttc taaaaattcc aattcgattt ttgttctagc agcaacttct
     8161 tttaaattta aatcttcaat ttttttccaa ttaagcattt atcatcctat cacaaagtat
     8221 tgcaaaagct acactgacat taaggctgtc gaaattattt ttcatttcta tgcctacaca
     8281 ttcatcgcat ttttttatta ttttagcact taatcccaaa ccttcacttc ctaaaatcaa
     8341 agctttttta cccttatcga ctttataatg atgaatttgt ttacctccac ttgcactagc
     8401 aaaaagctta aatcctactt gtttaagctc atttaaaacg gtaaaaatat cattatttaa
     8461 agcaatttca agatctagcg ccgctccact gctcgtgcgg ataacgcctt ccatcgcgag
     8521 tctttcgccg ataaaaataa gtccatccac tcctaaagca taagctgttc ttacgatagc
     8581 tcctatattt ccaacatcac tgataccata aagaatagct ataaattcac cctttttaag
     8641 agtgtgcaaa tctttaaatt catactcttt aatatctagt aaaaaacctt gatgatttcc
     8701 acctttagca taagcttggg ctgttttaaa atcaagtttt ttgatcttaa agcctgaact
     8761 agcaattttt ttaaaagttt ctttgtcgca ctctttagct aaataaagct catttataag
     8821 ctctttatgt cgttctaaaa tataaaaaaa tatctgtttt ccataaacta tcattctaaa
     8881 ttttacctaa ctttgactta aaagcagttt ttgataaatt tcttttggat tttttccatt
     8941 catctttgcc aaaagcttgc tttttgtttt taaaggtatt tcaagctcta aaatatcatt
     9001 ttcacacaag gaatgactaa tgttatcttt atcattttta gccaacacaa caacccactc
     9061 accctttaaa tttacctgtt ttaattcatt aaaaagatct atagccttgc ctttaaattt
     9121 ggcttcaaat tttttagaaa tttctttaat cacaaaaact tctctttgac tatctaaaat
     9181 agctatttgt tctattaaag acaaaatgcg tttaggagat tcgtaaataa cactaggata
     9241 aggatgattg agtatttttt ggatatcttt ttggcgttct ttgcctttat tggctaaaaa
     9301 acccataaaa ataaattctt tttcgcacaa agccgagctt acaagtgcca ccaaagctgc
     9361 attagcaccg ggtaaaactt caaattggat atcattttct aaagcaaaat caattaaaaa
     9421 ttgcccagga tcactaatcc ctggcatacc cgcatcactc aaaaaagcaa tgtcttgatt
     9481 aaaaaattcc aagtctaaat tttctaaaac ttttttttca ttgtgggtgt gaaaagatat
     9541 aaatttttta tctccaaaat cgatttcaaa tttagaagaa agtaaagaaa gtaaagactt
     9601 gcttaccctt gtatcttcac aaaaaaaaat atcgcaagtc tttaaaagct ctaaagcacg
     9661 aaaagaaata tcgcttaaat ttcctatggg tgtaggaata aaataaagca taattattgc
     9721 attgcgtatt ttttcttaaa tttctctaca cgacctgctg catctacgat tttttcgcta
     9781 cctgtgaaga aaggatggca gcttgaacaa atatcaactc ttaactcact tttgtttgat
     9841 ttagtaacaa aagtattgcc acaagcgcag ctaactttgc attctacata ttctggatga
     9901 atttcttttt tcatagcttt ttccttaaaa ttaaaacaat aagcggtgat tatattaaat
     9961 ttaatataaa aaaaacatta atttaagtaa aattaaagca atatttttgc agccactgca
    10021 atggcagcac tttgacttct caaaatatta ggaactttaa ggcaaatttt ttctttaaac
    10081 atttgttttt ctttggggct aaatccaccc tctggaccta taaaataaag tcgagtttta
    10141 tcaaattcct ttacctcacc ttcaaaatca accaaaacag catcaggaaa aaccttgcta
    10201 aattcttgta tatttttata gctttgaatt tgcattttgt gacttcttcc gcactgctca
    10261 caagatgaaa tgatgatttt ttctaatctc tcaaaatcaa gtttaaaatt tctttgagaa
    10321 aattcagtaa aaacaaggtg taatttttta actccaagtt catttaaaaa aggaagtgtt
    10381 ttttccaaaa ttttagtatc aataaccgcc aaggctaaat caagttcgct ttgtggatga
    10441 gacttaaaat gcttatgtaa aaaataaagc aaacaagaat tacgatctaa atttgaaatt
    10501 ttatattcat aaataaaatc atcctctaaa tttcttaaag ataaaatttc attttcttta
    10561 attcttcttg ctttcaagtg agcaaattct tcgcccttaa gttttaaaat ttcttcccct
    10621 gcttgcttgt ggtataaaaa ttgcatttat aaatatttac ctgttaaaaa aggtaagatt
    10681 aaaaggacaa gttcacaaaa taaaatcata aaactaatgc gtctaaaagt tatatagcgt
    10741 cttaatctac gagctttttt aaattgtata aaatgaaaaa tagctaaagc aaaaataaaa
    10801 atccaagaaa aaatcatgag ccaaagattt aaatgtgttt gaaattgttt aatcgctaaa
    10861 agcaaagaac ctgtaaaaag catcaaggct aaaaaaacat agtatatagg taaaaacaaa
    10921 cggattctgc ggataaatat aaattcggtt ttaaaatttc cttgagtcaa gacaagataa
    10981 aaaaacatta aaaatccact agcataaaga ctataaagat gtagagctaa aaaaaattca
    11041 taacttttat ccatttattt ctccttgctg atatattttg ctaaattttc tctttgttct
    11101 tgggttaaga aattatgagc ttcatctttt aaattttgaa gtctttgaat aaatttttca
    11161 ctgcttaaat ttttaattgc aatacctttt ttggttttaa cttctccttt ttctccatga
    11221 caagtagcgc atttttgttt atataaagaa ttaataacac ttggatttac atcatagtct
    11281 tcgctgatac tggcctcatc atcaaccggt aagggcaaat tcgtatcgct aaattcggtt
    11341 ttttcatcat tttgttcaat ttgtactatt tcttcggtag tattttggtt tttgtgatta
    11401 aattctttat catcactaca agcgtttaaa aataaaactg caaataagct tattaaaata
    11461 cttaagtttt tacccattaa acctccttag gatttgtaaa aatgtgtaaa tttttcaact
    11521 tatcataaaa ttctatatca ttccattctg cttttatagc aggtgaaaat tctatatctt
    11581 caagtgtgat ttttggcata gtaggactat aagcatcttc tttaaaccct tgtgcatagc
    11641 ctgttcttgt ttcatgtact ataatgcttt gcaaatttac accttgttcg ccatttatca
    11701 tcttggtttg ttttaataaa gcatcgatta aaataaaaaa tacacggcaa aaattttcag
    11761 cactgacatt aacaggcaag cttatccagc gctgcgagta ttttttcatt tcatttaaat
    11821 aagattcatc atcttgatta aaaagtgtaa tagcatgatc aaagctgtca ataatttgac
    11881 gcatatgggt ttttaaaagc ccaaagtcat aaaccattcc cgcattatct aaatacttgc
    11941 tttcaagtaa aacctcaacc ttgtaagaat gtccatgaat actactttta caacgacttg
    12001 aagaacaaaa tctaacaata tgagcatttt caaattcaaa taattttctt ataatcatac
    12061 accctcttta tcattccaaa gacgaatatg gattctatca gaataattat aaccattttt
    12121 aatacaaaac tcggctattt ttaaagcatt ttgttttaaa ttttgctcat tttctcccat
    12181 aggcatacaa aaaatttcat taggcgcttt ttctaaaatt tctaaaattt ctagtgacaa
    12241 actttctaat tgactggaat ttaaaacaaa tttgtaaaag ctatctttag cataatgctt
    12301 aaagccttta agggcattga aatttaatct tttttcttta cccatcccgc tattttgaag
    12361 cttgacactt agagcaaaaa cacattcttt ataaaaagga tatttttcaa aatcaagctc
    12421 tatgcttcca ttgctttcaa aatgcacttc aaaattattt ttcaataaag cttggataaa
    12481 atcgataaat tctggatttt catgatggat taagggttct cctccagtaa tcaccacaat
    12541 aggattaaaa tcttttttta aatcaagcac gcgtttaaaa agttcacttg catttaaaat
    12601 ttcatattct tcattaaatt ctttagtaaa aactgccctt atagtatcgc aacctttaag
    12661 agtttttcca tttttaataa gctttacccc aaagcctgag caattaaaat tacatcctgc
    12721 aaaacgcata aaaatggcta gttttccgct atatttgcct tctccttgta tacttaaaaa
    12781 actttcaaca agttgcaaat ttaacctccg gtttgataaa aagcgcgaga tgaagtttcg
    12841 ttatctacca cactccatct atttttttca ggtttattgc gtaatacttc ttgtaaaatg
    12901 tttgcagcag cgttaatatc accttttctc actgcttctt taatgcttaa agcctcatca
    12961 aaataaagac aaggtataag taaaccctca gcgcttaagc gaatgcggtt gcaagaatca
    13021 caaaattcat ggctatgtgg atctataatc ccaaattcat aaccatccgc actataaata
    13081 ctcacaggag ctttttcagc ttttttaatg agttttactt gatatttttg acttagaatt
    13141 tgtatgattt catctctttt tagaccttgt aattttccat aagcatgtat attttccata
    13201 aattcaataa agcgaatttg aatgttttta gattttgcaa attccaaaag aggtatcaac
    13261 tcatcatcat ttaaaccctt taacacaaca gtgtttagct tgacttttaa acctacgctt
    13321 aaggcctcat caatccccgc taagacacta tctaaaacat ctttttgcgc gagaattttt
    13381 gcttttttgc tttctagggt atcaagagag atatttaaac gcttcagtcc agcatcttta
    13441 agatctttag caaaatcttt taataaaaaa ccattcgttg taatggctaa atcaagatct
    13501 tttttataat catttatcat ttttataaac acacttaaat ctttacgcag taaaggctct
    13561 cctccagtga tacgaatttt ttcgatccct tcatcaatag ccactttaac aaacaaaaaa
    13621 agctcttcaa agctcagtaa attttcttta ggttgatgat taaaaggaat ttttggcata
    13681 caataaagac aacgaaaatt acatctttgg gttactgata ttctaagata attaatcttt
    13741 ctgccaaact gatcaataag cattgcctct cctagtgatt atttgataag ttgtttaaat
    13801 tttaaaacaa gctcaacatt tccagtgcct atacgcaaat cttttgcaat ttgctctata
    13861 ctttttccct ctttaaataa atccacaatt ttttgctctt cggtatcata atttggtgtt
    13921 aattttgtca tactttgtgc tttttgttcc aaatttaaaa tacgattttg ttgctcattt
    13981 tgaaaatctt ctataatatg ctccatggtt tttaaagttc ttaaaacggg ggtaattttt
    14041 gcactgattt gtttttcaag cgtgatttga atttcttctt tcaatagagt aattttatag
    14101 tcctcttcct cttgatcgcc ctcatctttt acgcctaatt ctttgcgtaa ataatgaagt
    14161 tcttttgtaa tatcttcaac cacgccttgg agtttgttta tttttgcact actttcttta
    14221 tctttgatat tcatataagc taatattgca accaaaagta cgatcataaa aactaaataa
    14281 agcacatcat tactcatttt tgtccttttt atttcttatc atatctcttt gcaattgaac
    14341 cacgaaagca tcaaaagcta ttctatcttc gggttttatt ttgataattt gagctaattt
    14401 tttattttga gctttagcaa aaatggccat tttttgatta ttaagatcaa atcttatgta
    14461 atactctttt ccttcttcta aaatctcatc taaaaaattt aaatattcaa aatttaaaga
    14521 ttcaaccacg cctttttgtt tgagtactaa aagatcttta tttttatcca aagaatcctc
    14581 aagtcttaaa atatcttctt ttaagctcaa aagtaaatcg aaaatgattt tctcgccctc
    14641 atcaaaatcc acacgcaagg cgagtttttt ccattttgaa agttgagaaa tggcacctaa
    14701 ttttagatat tcttgtaaaa aatggttatt ttcaatatca caacactcta aagaagcttc
    14761 aaatcctgcc ttaaaaagac ttatttccat actaaatcaa cccaaataaa aataaaaaat
    14821 attatactta aatatccatt taaagtaaaa aacgctttat caatgtgagc aaaattttta
    14881 tgtacaattt tatgttcaaa agccaaaata ataccgctga taatcactcc aaataatgca
    14941 atatttccaa gcgctactcc ccaaacctgc caaacaaaaa gtagccaaaa taatactgct
    15001 aatacatggc aaaaagccga gataaataaa gtcgccttag agccaaattt agcagggata
    15061 gaatgaagtc ctactttttt atcatactcc atatcttgta aagagtaaag caaatcaaat
    15121 ccagccgtcc aaaaagttac ccctaagcat aaaatcacac tataaatgtg aatttcaccc
    15181 atgactatca cactgcctgc aataggtgca agtcctaaac aaaatcctaa aactaaatgc
    15241 gctaaagaac taaagcgttt aaaagcagaa taaattgcca atacaaaaag cacaggaaaa
    15301 gaaagataaa aagccaaagt attgataaaa taagaacaca atataaaaat aatcgcatta
    15361 aggataataa aaatccaaac gcttttgcgt cctatttttc cactgacatt agggcgattt
    15421 gcacagcgag gattgtcttt atcgatatct tcatccatta aacgattggt cgccatagca
    15481 aaatttcttg cacttacagc acaaataata cccaaaatca aagccttaaa accaaaccaa
    15541 gcgctatcat taacgagttt tgaagccact atcatagatg aaaataaaaa gggcaaggca
    15601 aaaatagaat gcttaaatac cacaagttcc aaaatatctt taaatttatt ccaaattgtg
    15661 ttcatgtttt tcactttaaa atattttttg ctatgatttt actaaaattt tcataaattt
    15721 taggataaat tatcacatgt tttttcaaat cgcacttata ggaaccactg ccagtggaaa
    15781 gacttatata gcaaatgcct tagctaaaga atttaatgca gtggttttaa gccttgatag
    15841 tctttgtgtt tataaagaaa tcaatatagc caatgccaag ccatctaaag atgagcttgc
    15901 aaatttaaac tattttggag taaatttatt aagtgttgat gagcatttta atgtagaatt
    15961 atttataaga gaataccaaa aagcaaaaga atttgctctt ataaatgatt tgcctttgat
    16021 tatagtaggt ggaacaggtt tttatctaaa aacgatgata gatggtttaa gtcaaaaaat
    16081 tcaagatacg actagcactt taagtaatga tgaaatttat gctcttttat taaaaattga
    16141 tccggcttat aaaatagaaa aaaatgatac ttatcgtctt aaaaaatggc taagtattta
    16201 tgaaagtaca aatgaaattc ctagtgattt tttaaaaaag acacaaaaag atggggtgct
    16261 taaggatatt gaaatttatg agcttgtatg ggatagagaa attctaagaa aacgcataga
    16321 agcaagaaca aaagaaatga ttgataatgg gcttatagaa gaagcaagaa tgcttttttc
    16381 aaattttgat aacaatctta aagcattaaa ttctataggg cttaaggaat gcaaagagta
    16441 tttagaaaat caaatttctt taaaagagct tgaaagtttg attagtatac atacatcaca
    16501 gcttgccaag cgtcaaagaa cttttaataa aaaattccaa agcactcctt tggaattttc
    16561 taaagcccta gagttactta gaaataaatt tttagctaaa gaataaatgc tcaactaaaa
    16621 tttttatccc taagattatc aaaacagctc ctcctaaaaa ttcagctttg tttctaaagc
    16681 gagtgccaaa tttattgcct aattctaaag caatagcaca taagataaaa gtaatagagc
    16741 ctattaaaaa taatgccaaa aacaaatcaa catctaaaaa ggcaaagcta actcctatag
    16801 ctaaggcatc aacacttgta gctacagcta aggcaaacat gattttaaat ccaaattgat
    16861 ttgaattggt gtcgcaattt tcattctcaa aagattcttt aatcattttt agcccaatta
    16921 aagaaagtaa aacaaaggct atccaatgat caatacttgc aataaaagat gcaaaagtga
    16981 tgcctatagc atatccaata gctggcatta aagcttgaaa accaccaaaa taaactcctg
    17041 taataatata gtgttttaaa ttcaattttt taacactaaa tcccttacat aaagatacag
    17101 caaaagcatc catcgctagt gcacaggata aaagaataag actataaaaa tccatgacaa
    17161 ctcctatgaa agatgtaaaa gttgagaatt ataataaaaa tttcttaatt aattttttta
    17221 atgaaattat gattaaaaat ttatagcagt ggattatatt taattaaact ttaagaataa
    17281 aaaatatata attcaacttc gtttttattt ttactccttt taaaagtggc ccattcgtct
    17341 agcggttagg acatcgccct ttcacggcgg taacacgagt tcgagtctcg tatgggtcac
    17401 cacttaaatc ctttttttaa tatttccgaa atcaatcata gatgttcttt aggattttta
    17461 cttaatattt ttattgtttt tcataaaaat ggatttataa acttataaga attttatttg
    17521 tagaattttt tgttttatta gaatgatgag gattaataaa caaatgagcc atgataccaa
    17581 ttttttcttg ttatatttta aagataaaat tccaaaggat tctttaattt ttcttaagga
    17641 aagtttagaa aaagcaagcg aagaacaaaa agaaaagctt ttatttatca aactgaaaaa
    17701 tcccctatat ggacttttat ttgctttttt gcttcctggt ttagatagaa tttataatgg
    17761 caatataatt ttaggtatac ttaaaatcat atcagcaata cttgtttcta taggtttaat
    17821 aatagcagaa gataaaaatg atgaaagcac tatgctgatt tttataaatt tatttttcat
    17881 actaagtgtt tgggtgattt tggattattt tttggtatgg aaagatattt gtcaaaataa
    17941 tcttaaaaaa atttttgaag ttttacaatg aagcaagata aaacgatatt gctcatattt
    18001 aaagataaga ttcccgaaga aaggctattt atcttagagg aagaattaaa aaaagccaaa
    18061 aagatctaag tgctctttat gctatctctc ttaaaaatcc tttggttggc cttgtattaa
    18121 gtataactgt gggattattt ggggttgata gattttataa gggcgatatc ttgttagctt
    18181 gtattaaatt agcttttttt ataatacctt tatttgctac ttttgctgct tttatagcat
    18241 tgttagatga gagccattcg atttttatag attattttgc catttttgct ttaatgtttg
    18301 ttgttgctag catttggaag cttgtagata tttatcttgt ttttgtaggt attaaaaaag
    18361 ataattttca taaaattctt aattttttct cttaaaaaat gtcttggaaa tttaaagaaa
    18421 taattaaaga ctttcttagt ctttttatat aatttttatg ctacaatatt ttgtcaaact
    18481 actaaattaa aggagaaatt atgtttgaat taagaaaatt accttatgat accaatgctt
    18541 ttggtgattt tttaagtgct gaaactttta gttatcatca tggaaaacac cacaatactt
    18601 atgtaacaaa tcttaataat cttatcaaag atactgaatt tgcaagtaaa gatcttgtaa
    18661 gcattattaa aagttcaagt ggtggagtat ttaacaatgc tgctcaagtt tataatcatg
    18721 atttttattt tgattgcatt aaaccgatca caggctgtgg ctgtggtggc tcatgccaaa
    18781 gtatggatgc taatttacaa gcagctttag aaaaagaatt tggttcttta gagaatttca
    18841 aagctgaatt tatcaaaggt gcgacagggg tttttggttc aggttggttt tggttagttt
    18901 ataatactaa aaatcaaaaa ttagaatttg tgggtacttc aaatgcagct acacctatca
    18961 ctgaagataa agttccttta cttgttgtgg atgtttggga gcatgcttat tatgtagatc
    19021 atcgtaatgc gcgtcctgcg tatttagaaa aattctatgc tcatattaac tgggaatttg
    19081 tagcaaaagc ttatgaatgg gctttaaaag aaggtatggg atcagttagc ttttacgcaa
    19141 acgaacttca tcctgtaaaa taatacaagg catcttaaaa gatgcctttt tactctccta
    19201 aacttggagt catttcgata atcttccatg gaagtccttg agaattaagc tcatccataa
    19261 aaggttttgc gtcaaattct tccatattaa acacaccttt tccttgccaa attcctttag
    19321 cgattagttt tgtacctatc atcgcaggaa ctcctgtagt gtagcttacc gcttgtgcgc
    19381 cggtttcttt atagcattct tcgtgattgc aaacattata aatataaact tgtctgtctt
    19441 tgccatcttt tataccacgg attacacaac ctatattggt ataacctttt gtgcgaggac
    19501 ctaaacttgc aggatcagga agtagggttt tcaaaaattc tataggaatg atttctttac
    19561 cttgatgcat cacaggtttt atacctagca ttccaacatt ttcaaggcat ttcatatgag
    19621 ttaaataact ttgtccaaaa gtcataaaaa agcgaattct cttcaagccc ttgatatttt
    19681 ttaccaagct ttcaagctct tcgtgataaa gtaagtaact atcttttacg cctacttcag
    19741 gataatccca ttccattttt atttccatcg gttgtgtttc tatccactcg cctttttccc
    19801 agtagcgtcc cttagcagaa acttctctaa gattgatttc gggattaaaa ttagtcgcaa
    19861 aagcatagcc atgatcgcct gcgttacaat ctaaaatatc tatataagaa atttcatcaa
    19921 ataaattttg ctgcgcataa gcacaaaaaa catttgtaac gccaggatca aacccacttc
    19981 ctaaaagtcc taaaattcct gcttctttaa atttatcatt tcttgcccat tgttctttat
    20041 actcaaattt agctagatct ggatgctcat agtttgctgt atcaacataa tcaattcctg
    20101 cttttatgca agcatccatc aagcttaaat cctgataagg caaagctaca ttaagcaaaa
    20161 tttgcgcccc tgttttttta ataagctcta caaccgcatc gctatcatct gcatcaattt
    20221 gtgcggtttg aatttctact cctagacgct ctttgataaa actagcaatt tcatcgcatt
    20281 tgcttttggt tctacttgct agagtgattt tactaaaggt atctgaattc attgcgcatt
    20341 ttacggtagc tacgcgactt accccgcctg cgcctataat taaaagattt ttcattggtc
    20401 gtgtccttaa agaaatttta ggaattttag ctaaaaattg ataatatcaa aatttatttt
    20461 ttcttttagc gtgtaatttg agctgagcaa cataaaaaaa tctatatttt tatatcttac
    20521 tttgagtcta taaaaagctc ctaaaaattc tttttgcaaa attgtagctt caaaacgatt
    20581 tcctatttta agttctgcat agccaaaagt ataatttttt gaagcaatcc actgaaaaaa
    20641 ttcatcttct aaatcaagct cttcttctat gatatttaaa tcaggtaaaa ttctagcact
    20701 tttatgatta ggcttaaaat aaagctcttt aggatctgca tgagctagaa tttctccttt
    20761 atcaagaaag gcgattttat cagacataca ataagcatcc tcgatatcgt gagttaccat
    20821 aatggctgta attttttgtt tttgtatgag tttttttagc tctcttctta agtcttgttt
    20881 taaattctga tctaaattag aaaaaggttc atctaaaagc aaaagtttac agcctcttgc
    20941 tactgctcta gcaaaagcca ctctttgcgc ttgtccgccc gaaatttcat caattttctt
    21001 atatcttaaa ttttcaattt caaaggtttt taacaaatcc tctaaaattt gttttttatc
    21061 ttttttatca tagagtgcaa aaagtatatt tttttcaaca tttaaatggg gaaataaagc
    21121 atagttttga aacatcatcg ccacttcgcc cttgcatttt aaaaattcac aagagctcgc
    21181 ttgttctagt tgggcgatga ttcttaaaag tgtactttta ccacttccgc tccctcctaa
    21241 aatgcttaaa aattctcctt ctttaacatg aagattgata ttttttaaag cttgtatttt
    21301 gccaaaattt tttgataggt ttttaatttc taacatcatc tttccttgtg attttatcca
    21361 tccaaataac aactattaaa gaaagtaaaa caatgagcag cgaaggcaaa gcagcatcat
    21421 aaattctctc atcacttgca aaccaaaaag cttttacact tagagtttca aaaccaaaag
    21481 gagctaaaat tctactcaaa ggaagctctt ttatggtatc gataaaaaca atgataaaag
    21541 ccaaaaataa aaaatgtttc attaaaggag tatgaatttt aaaaaataag atcaaataac
    21601 tcggccttaa atttaaactt gcttcatcgg tgttaagatg gattttatta taaccccctt
    21661 ctaaagaata aattgcactc gctagaaaac gaataatata agcaaaaact aaaataatca
    21721 atgaagtgcc taataaatta agatgaaaaa ttttatctaa aaacacgaaa aggacaatca
    21781 tgctaattcc taaggcagcc gcaggtatag aataacccaa agaacttagc ttaagaatac
    21841 ataggctgaa aaagttattt tttatgattc ttgagctaaa cattaaaaaa taagccagta
    21901 aagtcgtaat caaagctgtg atgaaagcca atataatggt ttgaaaacta atgatataaa
    21961 attctgcttc aaaaagttta aaatctttta gcccccaata aacaagccat ataaaaggca
    22021 agataaatcc taataaagcg atgataaaac aataaaaaca ggctaaaatt tgctttatat
    22081 gacttaattt cctttttttg ataaaaagag ttaaattttg attaaaacta taatgatgct
    22141 tgtttttata ataataatct atatacatga ttaaaaaaac aaaaatcatc aaaattcctg
    22201 acaaaatact agatgaataa gaatcattca aatcatacca gagtttaaaa atccctgccg
    22261 aaaaggtatc tacccccaaa taagccgaag ctccatagtc gcttaaagtt tccatcaaca
    22321 caagcaaagc tccagaaaaa atagcaggtc ttgcacttaa aagcatgatg cgtgaaaaaa
    22381 ttctaaattc agaatatccc ataattttag ctacttcata agcttctatg gcttcgcttt
    22441 taaaagcagt tttggcaaat aagtaaatat aaggatataa agaaattcct aagacaaaaa
    22501 taactccata gtggttgaaa aaatctatcc taaaaccaaa aacttcatga aaaaagccct
    22561 gaaaatccat aattccaaca tatacaaaag ctaaaatata agcaggtatt gccaagggca
    22621 aaatgagtaa tttttctaaa atcctacaaa agtaaaaatt ataatttgcc atcaaataag
    22681 cactacttac acctaaaatc aagcttagta ataacacccc tatactaact atcaaagtat
    22741 ctttgatgaa ttttaaaaac aaataatcaa aaaaatgact caaattttct ttaatggatg
    22801 aaatttcagc caaattgctt gtattgaaat tttgaaaaag aatataaaaa agctcagcaa
    22861 agatgccaaa aataggtaga gtaagaaaaa gggcaagtaa aattgcccct atcttgtaat
    22921 actttagggt tttaagcatt atctaaaacc gacttgatca taaattttaa cagcctcttt
    22981 aaccttttct gctatttgac tcacaggtat ttgatcttct ttaaaagttc caaaatcttt
    23041 tactgtttgg cttaattcta catcatttct tataggaaat tcataattgc tatcagtgag
    23101 aattttttgg atttctggag ttagcataaa ttccataaac ttcttagctg cttcttgatt
    23161 tttgcttgat tttgtcatag caataccgct gatatttata tgagttcctc tattgtcttg
    23221 atttggaaaa ataataccta aggaatttcc aacttctaca tcttttggat ttttagaatt
    23281 ttttaaaagc cctatataat aagtattcat aacagcaaat ttagcctcac ctgcaaaaac
    23341 ttgtctggct tgatccctat ctccaccctt tggtttggtt gcaagattgt caagcacacc
    23401 cttagcccat actttagcgt tttcatctcc atcattagct ataatagaag ctaaaagagt
    23461 tttgctataa ggagctgtag cacttctcat aacgatttgt cctttaaatt caggcttagc
    23521 caaatcttca tagtttttca ttttgctaat gtcagtgttt gcatttttat tgtaagcaat
    23581 aattcttgct ctttttgtaa tcgcaaacca ttccccatct ttatctctta aatgagcggg
    23641 tatagtatct tctaaatatt ttgatttaac agggcttaaa agtccagaat tttttgcttc
    23701 tgtaagattg gatatatcgg ctgttataaa aatatcagca ggcgaattgc ttccttcaag
    23761 cgaaagtctt ttgatgagtt ctgaagcttt agcttgagta tgattaactt taatgcctgt
    23821 tttttcctca aattttttta taatctgaaa atcagcatca taatgtcttg ccgagtaaat
    23881 gttaagttct gcagcaccta gtaaagaaaa acctaataaa cataaagaaa agattttttt
    23941 catttatttg tccttatatt gagaattata tttagtttta tcatgatctt taaaatcagc
    24001 attagagtgt tcagagcacg caaatgcaaa acctaagcaa aataaaaata aaactaattt
    24061 tttcattatt tctccccccc cccttttttt ttgtgattaa aattagacta atttttgata
    24121 aaggatatta atattaaaaa gtaaatataa a
//
LOCUS       DBBXOW010000020        23454 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.020, whole genome shotgun sequence.
ACCESSION   DBBXOW010000020 DBBXOW010000000
VERSION     DBBXOW010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23454
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.020"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(62..2428)
                     /locus_tag="ACJE1S_000772"
     CDS             complement(62..2428)
                     /locus_tag="ACJE1S_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HGG0806336.1"
                     /translation="MKIIFLVLLSICTLFSFELTLNTGRENNQAFAVLHASNDLDFTC
                     QKITIEDKIHFECEIIGVVDNKLSNQSFTAFDLKFIKEPQKIKMIILPKMSARMFDLS
                     QNIYIDKELDSSSAHKSKSFTFIFTPELERAKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVIIPQSADINTYLRIKNEYDKANYTQVVIDAQNAINRYRGSIFMNEFILYKLRAQS
                     QIYTQDPSMRDQQVLEKMIDEAKNWNRTFTSDKNFPEVLHIMLRTYIALSQRADIEYT
                     MSILNNEQPNSYFTQLARLDYADYIYPLNEKERAIDIYEDIYFNTKNLDLAARAAMSL
                     IKDYLANNQIDKAVQYVNTILKANPEYFPKDMFRSLELAKLFNQHKQYDISASIYEDV
                     FVKMPKIDDRYEQVLKDLALTLAMTSRSSDANKYLDLYMDNYLDGKYLDEIRKANDEV
                     FFALADNNATFLHQRYANLMKEYAQKDENIVNKALSEDVALYYKEGNLSAVLTYKDQI
                     ENKKLTNSAKLLEQAAIQLLNNDLKADNCINAVNIFTQFNAYEIGQKIENKKQMLACL
                     MRTSNMQQAMDYIDKNHNEDSIFYGLQKASILYDNKQYPLALNIAREIANSRILKSDE
                     ENFKAYYLQFLSYLKMDDYNMAIKILQILESFPMNFTMVEAYDNLLIYANDHNMQTTI
                     LTYAPKAIDYQNLKGINLFSPNLEFIYLDTLAKTNQNQEALAVLIDLLKLKLSDEDRA
                     RALYIQSMTYERMQNTQAQKESLKQCLELKTTSNWQNLCRDKNQILAQ"
     gene            complement(2441..3814)
                     /locus_tag="ACJE1S_000773"
     CDS             complement(2441..3814)
                     /locus_tag="ACJE1S_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HGG0806337.1"
                     /translation="MLGNIDLSSLNIPLSYPFAFLIAVAIVLLLCSGFWKFHRTFYMA
                     TSSLSLIVSVFLILNNIAAQGLEAKGFLGTLNNDIVSLYASLVILCFSFLYLLMQKEE
                     NQGEFYSLFLFMVAGLLLMVSSSNLILIFIGLESSSLALYTLIAMRGSNNAISSAIKY
                     FSVAAVGSGFFVMASALIYIRTGTLDLGLKLALDKDPMLLGAGVMIFVLCAIKLSLAP
                     FHFWLKDVYSSAHVNLVAFISVVPKIAMFVVVIRLFSFLNHLGFENILNVLAVFSMLV
                     AALAALSQKDVKKMFAYSSIVHSSFVLAACIPLLNAADDVLNSIFVYWVLFGFANYGV
                     FLILSTFKGSSFEEFNALLFKKPLIALSLSFCVLSLAGIPPFGAFWGKVMVLKTLIVA
                     EYWYLALFMALASLIMLYAYLKLIIHALFIKTQAKASEHLNFIQSFILAFCTLISVFA
                     LFLLLKI"
     gene            complement(3804..5294)
                     /locus_tag="ACJE1S_000774"
     CDS             complement(3804..5294)
                     /locus_tag="ACJE1S_000774"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HGG0806338.1"
                     /translation="MLNYLIFFPLIAAFVTLVLNRGGIKVFSVIASLMVLGLNIKIWQ
                     DYLNGINLEYQLPFKVVNFMSYHIGADSIALILMLLSSLMIFLSFLFLKIEQKAMVSC
                     IFFLEFAIMGLFSSLDGLLFYVFWEFSLLPLLYIMGVYGKDYRAGIKFFIYAFAGSIL
                     MLLALIYQAYATYKLLNIFTFDIEIWKNNASAMSFNEQILLFGAFFIAFAIKAPLFPF
                     HTWAPKVYANSPILVSMMLVAFKMAPFGFLRFCLPLFPDASVYFMPLVVALCIVSILY
                     NALIAYRASNLKELIAYSSISHLGVMILGIFSFNALGLSGAVFYMFAHGIVTGALFLM
                     AELLYKKYGTLEISYYHSLANKAPLFTIFFTLILLASISLPLTISFVGEFLILLGVAK
                     LNLLYALLAGLVIILGAIYMLHVFRKMFFMQKESQLETCSLHAREILSLIPIVVLIFY
                     LGIAPKIFLDPLNKDADFIVEKMKERAIDDQTIRFLNHLEGENNVR"
     gene            complement(5296..7086)
                     /gene="nuoL"
                     /locus_tag="ACJE1S_000775"
     CDS             complement(5296..7086)
                     /gene="nuoL"
                     /locus_tag="ACJE1S_000775"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HGG0806339.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSERKIFVAYVCSLLIGISAF
                     CSLYLLFNNQAFNVSLFEWFIGLSFGFNIDAISLTMMSVVGVVATCVHFYSIFYMAHD
                     KDFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNNTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYIQAGTLKYNEVFAIAQNLDHNALVLIASCLFIGAMGK
                     SAQFPLHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRAGEIYSLVPEVSYFIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLVTHAFFKSLL
                     FLGAGNVMHAMDDQLDIKKMGGLFKSLKITAIFMTIGSLALAGIYPLAGFFSKDLILG
                     YSFIAHYHGIFLILLISAFLTAFYSFRLLMLVFFTPSRHDKHPHEASKIALLAMSPLV
                     VLAIIAGLFEHSFFEYLSTQLIFIDAQNKLVMICASVAAVLGVVLAIIAYKASWFKDS
                     IEQNKIHKLLSNDYFIPKFYHEFIVSKYESLCAVLKHCDTYIFDAIVDKIAYYCNLIS
                     QKIIMSNSLNLMLRFLVAGFVILLILVWVV"
     gene            complement(7089..7382)
                     /gene="nuoK"
                     /locus_tag="ACJE1S_000776"
     CDS             complement(7089..7382)
                     /gene="nuoK"
                     /locus_tag="ACJE1S_000776"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HGG0806340.1"
                     /translation="MVEKYFFIAIAMFIVGLIGILKRQNLIMLFISSEILLNAANLAL
                     VAASKMHQDLNGQVFALFVMGVAACEVAVGVAFCVLWYRRKGTLELKSLKEEV"
     gene            complement(7382..7897)
                     /locus_tag="ACJE1S_000777"
     CDS             complement(7382..7897)
                     /locus_tag="ACJE1S_000777"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HGG0806341.1"
                     /translation="MIEILAFTFFSVVVLGFFLVAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDSSKEFKEKLRAKKSFFLLVILSAVL
                     LLFMLLGFKHQNIAGDLALSDPNLFDYNKQLAFAIFSKYLLAFEFIAILLLIALICAI
                     VLTHKELTKER"
     gene            complement(7894..8559)
                     /gene="nuoI"
                     /locus_tag="ACJE1S_000778"
     CDS             complement(7894..8559)
                     /gene="nuoI"
                     /locus_tag="ACJE1S_000778"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HGG0806342.1"
                     /translation="MKNYYLIDEKRKTPTSTWQKISQALKRSVKLELFVGLWVVMREM
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENARKKVGNYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDADLLVKKTPNYYEVLQEREKNLCTDEECTLPNLAPQG
                     EVK"
     gene            complement(8569..9567)
                     /gene="nuoH"
                     /locus_tag="ACJE1S_000779"
     CDS             complement(8569..9567)
                     /gene="nuoH"
                     /locus_tag="ACJE1S_000779"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HGG0806343.1"
                     /translation="MSDFAFFALEALIKCIIVIAIFATLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKLIFAIAPLIAAICAFVSLAAIPMLP
                     EFTLFGRTIQPLIADINVALLFVIGTSGLCFYAIFLGGLASNNKWSIIGAARGLVAII
                     SYESVGALALIAIVMLVGSFSLIDINNYQSDGFFSWLIFKQPLAFALFVIALFIETNR
                     TPLCLTENEADIVAGYGTEYSGLRWGMFFIGEYASMIAGAILITLLFLGGFNDFYFIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMRMCYLILIPLAVLNLLITAFAVLI"
     gene            complement(9560..12022)
                     /locus_tag="ACJE1S_000780"
     CDS             complement(9560..12022)
                     /locus_tag="ACJE1S_000780"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HGG0806344.1"
                     /translation="MTIKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNIQRHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDMLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDVKQSGISNQKAKIYRVSNDFAFA
                     SLNKAARFAFDTQNEASKDEKAFKELVELFEKNEIRNIKFNSFITNEEALILQNFKKK
                     FGLNLINNEALKFKDFLEEFISNGGEFYNATTQDITKSDFLVVAGTLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPIEDVGIAKYSKNFISHTHKSGDEEQILYFLLQKFTQDENIK
                     ANLAEFFVNENKEIEESINEEVIEQVVEKDEEGNEISKEVKKVVPKKVKKTIEVKRSV
                     FAKNLGIDEDKLEDLLLKKANFTLIIGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDESMQEGKTLGYNERGDFSFSYEEHANLASSSLNQQEGTFLNYD
                     KKVVPTNAALEFDGYFLNDLANALGFDEEYTINYTKRLPINKGFSPLEFDSLDNFYTN
                     GGECKRGYDLNLECHKKSAKNEFIAPHLQNLTLQEDEILLYSANPSYQFGRFSNRASA
                     TNEAIFLGVSQNLAKEKNLQDKDLVKLKIKDKELSLSVRIDKDIKNGAFLPYFDEKID
                     TLSFFDERFIVANLEKLGASHE"
     gene            complement(12019..12711)
                     /locus_tag="ACJE1S_000781"
     CDS             complement(12019..12711)
                     /locus_tag="ACJE1S_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806345.1"
                     /translation="MSYERALCFVDMLSLKNKILCEKIQGENIYISCLEDKNLNAKFY
                     KCEIASLSYVLALLCKMSEMDNFQDLDEGYLSAESCLGEEEASEILDFLENAKYLIVD
                     ENINSYKDSENIKYFLNFLSQKYKLKILDSNEKECDFKNAKLSTLKELDSYDGLVLFR
                     ANLKDDNLHCSKQFLQIAKCKDKSEVEVLAKDFSLKTTLCLDENLQGTIAFLNYDQQG
                     FDFTPIRIKEAK"
     gene            complement(12708..12935)
                     /locus_tag="ACJE1S_000782"
     CDS             complement(12708..12935)
                     /locus_tag="ACJE1S_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HGG0806346.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKESV"
     gene            complement(12932..14158)
                     /gene="nuoD"
                     /locus_tag="ACJE1S_000783"
     CDS             complement(12932..14158)
                     /gene="nuoD"
                     /locus_tag="ACJE1S_000783"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HGG0806347.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPTIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPEGFLNELLAFCDKFPKDIADYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCATLYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14160..14954)
                     /locus_tag="ACJE1S_000784"
     CDS             complement(14160..14954)
                     /locus_tag="ACJE1S_000784"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HGG0806348.1"
                     /translation="MMRKYSDKKNAQLQNYYKDRFYHAPHTQKLDVNESAFKQDYEVL
                     KTEVDIINSFIELDFWVIEIKKEDNVKTLQMLHTLGYLNFTEASAIDFVADKNGFEVF
                     YQLLNLEKRLRVRVRTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWYGHPLLKTYPLQGDEFAQWYEIDKIFGKEYREVVGVEQRDPGFADDKDTLNF
                     ARLYHEVPKGGSRKEVSFKQEYQEDGGVAFVKKVKRDEAKILEKRR"
     gene            complement(14951..15454)
                     /locus_tag="ACJE1S_000785"
     CDS             complement(14951..15454)
                     /locus_tag="ACJE1S_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HGG0806349.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLV"
     gene            complement(15436..15825)
                     /locus_tag="ACJE1S_000786"
     CDS             complement(15436..15825)
                     /locus_tag="ACJE1S_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HGG0806350.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIVALIFILLDIEVVFLFPWALIFKDLGWFGLLE
                     VFVFILLLGVGFLYAYKKGAFAWQSIK"
     gene            complement(15943..16608)
                     /locus_tag="ACJE1S_000787"
     CDS             complement(15943..16608)
                     /locus_tag="ACJE1S_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG0806351.1"
                     /translation="MLEVKNLGKFYEFKKHWYLKKEKHLIFENINFSLKENENLMILG
                     QSGAGKSTLARILCFLENPSFGEIIYKNLNPHSLDKTKQRLLRKEIQYCFQDQKAALN
                     PYKKIKNLIQDGLENFNIKKEQEKILEFFDRFNLKKQILEQKPYELSGGEATRVGLIR
                     ALILEPKVLILDEITSSLDMKNSKEILKFLYHYQQENLISYIFITHQDGFFVNFKCKK
                     MKL"
     gene            complement(16601..17311)
                     /locus_tag="ACJE1S_000788"
     CDS             complement(16601..17311)
                     /locus_tag="ACJE1S_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG0806352.1"
                     /translation="MKVRNLSLKLNQKKIFENISFDIKIAKSLMIVGESGVGKSLLGK
                     SLIRLLDPKFEINADEWSFNEVSVFNLNQNELRAFRSKVGLVLQDAELSLYPYLNIGN
                     LFHLILKTHTKLNQKDRKRYAFDLLEKLGFDDVDLLWHSYANELSLGMARRVSLALAL
                     LSKPQILICDEITASLDKENVQKIIQILKKLKNTLGLVCITHDLNLVNSLADEVLFLE
                     KNQAQLFRVDEFLRIYHA"
     gene            complement(17308..18063)
                     /locus_tag="ACJE1S_000789"
     CDS             complement(17308..18063)
                     /locus_tag="ACJE1S_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806353.1"
                     /translation="MFLILSALFAPLLAPFDVLESHLNHLHQAPNLTYYLGTDFLGRD
                     VFSRLLFALRISLFIGICSSFLSIFFALFYLFLARCFFYTFWMRILDLFLALPAFLLM
                     MFFQSFVGVNIFLMIFLIALVHWPFIARIVESELKRLENLDFYKASIVLGRTKFRAFF
                     KDLLPALKSLIFVLFIFNIIHAIATEATLSFFGLGLGFNIPTLGTLLNESSKAIFIGA
                     WWMILFPLLALMFLFLPLLWLGNYLQKIGGVRS"
     gene            complement(18089..19033)
                     /locus_tag="ACJE1S_000790"
     CDS             complement(18089..19033)
                     /locus_tag="ACJE1S_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806354.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLYFSKGSVAYANKVNSQSKELV
                     QRIEANLGLDKPLLEQYQIWLFKALKGDLSVSFLSGESVLKLIKERMANTLILSLSAL
                     VLLFLLSVFLALLGHYYKESFIDKLITFLAFNFFALPPFVLALFFVLIFGIFWQVLPI
                     TGTSDIGFEDDFFNRLKHLILPVLVLVLSHLALFLRIARNFINETFSQIFVQNLYARA
                     LREKDIYFLVLRYSLSPIIAYFGGSALSFMMGTYVVESVFAYEGLGSLLFESILFKDF
                     PMALALIFFSVLLAAFFTFLSDVFAWILNPRLKRLKFV"
     gene            complement(19034..20572)
                     /locus_tag="ACJE1S_000791"
     CDS             complement(19034..20572)
                     /locus_tag="ACJE1S_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0806355.1"
                     /translation="MLRWFILLFLLFFNLEAKIPKDTLIVAVENEISRINPAYSEDHD
                     AVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSYDIFLREDVLWHDGVKFSADDVK
                     FSLEAFKNPKNNSSVYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
                     SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPS
                     VASVELKNGKIDAALIDVSLLNIFKKDENFKILRERSADYRALMFNLENEFLKDIQIR
                     KALNYAVDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYNPKKAQDLILALGFK
                     KNDEGIFEKDGKILEFEIWTMSNDPLRVSLAGILQSEFKKIGVIAKVVAKPAGSFDYS
                     KVDSFLVGWGSPLDPDFHTFRVFESSQDSALNNEGWNFGHYHDKKVDIALQKARNTLN
                     LEERKKYYKEFIDALYENPPFIFLTYLDFALVYNAKLEGVKARNLGHHGVGFTWNIYE
                     WSKK"
     gene            complement(20676..23453)
                     /locus_tag="ACJE1S_000792"
     CDS             complement(20676..23453)
                     /locus_tag="ACJE1S_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding and (Fe-S)-binding domain-containing
                     protein"
                     /protein_id="HGG0806356.1"
                     /translation="MANFKAFYNEAKYIFKDRIFNDYARCYAYGIDASCYFYIPKIVI
                     IAKNEDEIKQIIQLANTYKTPITFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDAN
                     EITLGCGVVGIHANESLAFLKKKIGPDPATINSALIGGIINNNSSGMCCGTKDNSYKT
                     LRSIRVILANGSMLDTSDALSVARFKDENKKLINELREIKEEINANKELKDLIIKKFK
                     IKNTTGYSLNAFVDYDDEIDILAHLLVGSEGTLGFVSEVKLAVLDDLEFKACALLFFD
                     NINNAANTIKEFAKVDFISSAEIMDYASLKAASNYDELRDILADIKEGNTCVLIQSEH
                     SNELKLDENINKIKEISKLAYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVIT
                     EDVCFNIEDLADGIKSIQELFYKYGFSDNGIIFGHALAGNIHFIITPDLNNKLEFDNF
                     SNLVKEMSNIVASYGGSIKAEHGTGRMVAPFVEVEWGKQAYLINKKIKSIFDKDNLFN
                     PDVIISDDKDIYKKNIKQASWIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREI
                     KRLESLNDDESKAKLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNI
                     GFISKILGNLAYKNHEKTLKIAKFSLSIANKFDNLSLDNKLEKASNFLSIIPRTRAYL
                     PKVNDYELKSRKRACNVVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYA
                     PNDLCCGKAYENFQDIQDKNIQKINDFLSNIDSPIVLDHSACSAKLISDHSKYEIYDL
                     SEYLLKFIAPKLRIDKINENVGLYIMCAARKLGLNENIIKLAKLCTNGKVLIDNDTYC
                     CGFAGYKGFFKPQLNINATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAY
                     LLDECSEKQFN"
BASE COUNT         8562 a         4445 c         2919 g         7528 t
ORIGIN      
        1 aatccaagct aagcaatcac aaaacaaaaa tcatctcaat gcatagaaaa tcaaattaag
       61 cttattgggc taaaatttga tttttatctc gacataaatt ttgccaatta gaagtagttt
      121 taagctccaa acactgcttt agactttctt tttgcgcctg agtattttgc attctttcat
      181 aagtcatact ttgtatatat aaagctctag ccctatcttc atctgaaagc tttaatttta
      241 acaaatctat taatactgct aaagcttctt gattttgatt ggttttcgct aaagtatcaa
      301 gataaataaa ttctaaattg gggctaaaaa gattaattcc ttttaaattt tgatagtcga
      361 tagccttggg cgcataagtt aaaatcgttg tttgcatatt gtgatcgttt gcgtaaatta
      421 ataaattatc ataagcttca accattgtaa aattcatagg aaagctttct aaaatttgta
      481 aaattttaat agccatatta taatcatcca ttttcaaata agacaaaaat tgcaaataat
      541 aagctttaaa attctcctca tcactcttta aaattctaga atttgctatt tctcgagcta
      601 tatttaaagc taatggatat tgtttattat cataaagtat agatgctttt tgcaaaccat
      661 aaaaaataga atcttcatta tgatttttat cgatataatc cattgcttgt tgcatatttg
      721 aagttctcat aagacaagct agcatttgtt ttttattttc tatcttttgt ccaatttcgt
      781 aagcattaaa ttgtgtaaat atattaacag cattgataca attatcggct tttaaatcat
      841 tgtttagaag ctgaatagct gcttgctcta ataattttgc agaatttgtt aatttcttat
      901 tttctatctg atctttatag gtcaaaactg cacttaagtt accctcttta taataaagcg
      961 caacatcttc gcttaaagct ttattgacta tattttcatc tttttgagcg tactctttca
     1021 tcaggtttgc ataacgctga tgtaaaaatg tagcattatt atccgctaag gcaaagaaaa
     1081 cctcatcatt tgcttttcta atttcatcta aatattttcc atctaaataa ttatccatat
     1141 ataaatcaag atatttgtta gcatcacttg atcttgaagt catagctagg gttaaagcta
     1201 gatcctttaa aacctgctca tatctatcat caattttagg catttttaca aaaacatctt
     1261 cataaatact tgcacttatg tcatattgtt tatgctgatt aaaaagctta gcaagctcta
     1321 aagatctaaa catatccttt ggaaaatatt caggattggc ttttaaaatt gtattgacat
     1381 attgcacagc tttatcgatt tgattattgg caagataatc tttgattaag ctcattgccg
     1441 cccttgctgc caaatctaaa tttttggtgt taaaataaat atcctcataa atatctatag
     1501 ctctttcttt ctcgtttaaa ggatagatgt aatcagcata atcaagtctt gctagctgag
     1561 taaaataact attgggttgc tcattattta aaatcgacat agtatattct atatcagcgc
     1621 gttgcgataa agcaatatag gttcttagca taatatgcaa gacttctgga aaattcttat
     1681 cgcttgtaaa agtacgattc caatttttag cctcatcaat cattttttcc aaaacttgct
     1741 gatcgcgcat acttggatct tgagtgtaaa tttggctttg tgctctaagc ttataaagta
     1801 taaactcatt cataaaaata ctaccacgat agcgattgat agcattttga gcatctataa
     1861 ccacttgagt ataattagcc ttatcgtact cattttttat acgcaaatag gtattaatat
     1921 cagcactttg agggatgatg acaggatctg aatttaaatc caaagctccg acataaggca
     1981 agctttcatg cgggaagttg atgttaaaat caagcccatc atagtctttt gcgcgttcaa
     2041 gttcaggagt aaatataaaa gtaaaacttt tacttttatg tgcactagaa gagtctagtt
     2101 ctttatctat ataaatattt tgtgataaat caaacattct tgcgctcatt ttaggcaaga
     2161 taatcatctt aatcttttga ggctctttga taaattttaa atcaaaagca gtaaagcttt
     2221 gattgcttaa tttattatct actacgccta taatctcgca ttcaaaatgt atcttatctt
     2281 cgatagtaat tttttgacaa gtaaaatcta agtcattact agcatgtaag accgcaaaag
     2341 cttgattatt ctcgcggcct gtgtttaggg ttaattcaaa agaaaaaaga gtgcaaatac
     2401 tcagcaatac caaaaatata attttcatac aataattata ttatatttta agtaacaaaa
     2461 ataaagcaaa cacactaatt aaagtacaaa aagctaaaat aaaactctga ataaaattta
     2521 aatgctctga agctttagct tgggttttta taaacaaagc atggatgatt aacttcaagt
     2581 aagcataaag cataatgagc gatgctaaag ccataaaaag ggctaaatac caatactcag
     2641 cgacaattaa agtttttaac accatcacct taccccaaaa agcaccaaat ggaggaattc
     2701 cagccaatga aagcacacaa aaactaagcg ataatgcaat caaaggcttt ttaaacaaca
     2761 aagcattaaa ttcttcaaac gaacttccct taaaggtact aagaatcaaa aacacaccat
     2821 aattagcaaa accaaaaagc acccaataaa caaatataga atttaaaaca tcatcggccg
     2881 catttaacaa aggtatacat gctgctaaaa caaaactaga atgcactata gaactataag
     2941 caaacatctt tttgacatct ttttgactca atgcggctaa agctgcaaca agcattgaaa
     3001 atacagccaa tacatttaaa atattttcaa atcctaaatg atttaaaaag ctaaaaagtc
     3061 tgataactac aacaaacatt gctattttag gaacaacaga gataaaagcg accaaattta
     3121 catgtgctga agaatacaca tcttttaacc aaaaatggaa aggagctaaa gaaagtttga
     3181 tagcacataa aacaaaaatc ataactcctg cgcctaaaag cataggatct ttatcaagag
     3241 ccaattttaa acccaaatcc aaagtgcctg ttctaatata aatcaaagcc gacgccataa
     3301 caaaaaagcc cgagcctact gccgcaacgc taaaatattt aatagcactt gaaatagcat
     3361 tattacttcc gcgcatagca ataagtgtat aaagagccaa ggaagagctt tcaagtccta
     3421 tgaaaatcaa gatcaaattt gagcttgaaa ccataagtaa aagccccgct accataaata
     3481 aaaacaaact ataaaattcg ccttgatttt cttctttttg catcaaaaga tataaaaacg
     3541 aaaaacataa aataaccaaa gaagcataca aagaaacaat atcattattt aaagttccta
     3601 aaaatccttt tgcttctaag ccttgcgcag cgatattatt taaaattaaa aaaacactca
     3661 caatcaaaga taaagagcta gtagccatat aaaaagttcg atgaaatttc caaaaacccg
     3721 aacaaagcaa aagcacgata gccacagcaa tcaaaaatgc aaaaggatag gataaaggga
     3781 tatttaagct gcttaaatcg atattaccta acattatttt ccccttctaa atgatttaaa
     3841 aatcgaatgg tttgatcatc aatagctctt tctttcattt tttcaacgat aaaatccgca
     3901 tctttattta aaggatctaa aaaaatcttt ggtgctatac ccaaataaaa aattaaaact
     3961 actataggta ttaaagaaag aatttctctt gcgtgcaagg agcaagtttc aagctgactt
     4021 tctttttgca taaaaaacat ttttctaaat acatgaagca tataaatagc acctaaaata
     4081 atcacaagtc ctgccaaaag agcataaagt aaattaagtt ttgcaacacc taaaagaatt
     4141 aaaaattctc caacaaaaga tattgtcagt ggtaaagata tacttgcaag taaaatcaaa
     4201 gtaaagaaaa tagtaaataa aggcgcttta ttggctaaag aatgataata agaaatttca
     4261 agtgtaccgt attttttata taaaagttca gccattaaaa acaaggctcc tgtaacaata
     4321 ccatgtgcaa acatataaaa tactgctcca ctaagtccca aagcattaaa agaaaaaata
     4381 cctaaaatca taaccccaag gtgagaaatc gaactataag cgatcaattc ttttaaattt
     4441 gaagcacggt aagcaattag agcattataa agtatactta ctatacacaa agctaccact
     4501 aaaggcataa aatacacact tgcatcagga aaaagtggca agcaaaagcg taaaaatcca
     4561 aaaggagcca ttttaaatgc tacaagcatc atagaaacta aaataggcga atttgcataa
     4621 acctttggtg cccaagtatg aaaagggaaa agcggtgctt taatagcaaa ggcgataaaa
     4681 aatgctccaa aaagtaaaat ttgttcatta aaactcatag ccgaagcatt atttttccaa
     4741 atttctatat caaaagtgaa aatatttaaa agtttgtagg tcgcataggc ttgataaatt
     4801 aaagctaaaa gcattaaaat cgaacccgca aaggcataaa taaaaaattt aatccctgct
     4861 ctataatctt taccatatac tcccataata taaagcaaag gcaaaagtga aaattcccaa
     4921 aatacataaa agagtaagcc atcaagcgaa gaaaataatc ccataatcgc aaattctaaa
     4981 aagaatatgc aagataccat tgctttttgc tcaatcttta aaaataaaaa acttaaaaat
     5041 atcatcaagg agcttaaaag cattaaaatc aaagctatgc tatcagcgcc tatatgataa
     5101 ctcatgaaat tgactacctt gaaaggaagt tgatattcaa ggtttattcc atttaaataa
     5161 tcttgccaaa tcttgatatt taaaccaagc accattaaac tcgctatgac gctaaaaact
     5221 tttatacccc cacgattcaa aacaagagtt acaaaagcgg caattaaagg aaaaaagatt
     5281 agataattta acattttaca ccacccatac caaaataagc aaaatcacaa atcctgccac
     5341 caaaaatcta agcattaaat taagactatt actcataatt attttttgcg aaatcaaatt
     5401 acaataataa gcaattttgt ccactatagc atcaaaaata taagtgtcac aatgttttaa
     5461 aactgcacac aagctttcgt attttgaaac tataaattca tgataaaact tagggataaa
     5521 ataatcattg ctcaaaagtt tatggatttt attttgctct atgctatctt taaaccaaga
     5581 agccttatag gctataatgg ctaaaactac acccaaaaca gccgctacgc tcgcacaaat
     5641 cattacaagt ttattttgag catcgataaa aatgagttga gtgctaagat attcgaaaaa
     5701 actatgctca aacaagcctg cgataatagc taaaaccacc aaaggactca tagccaaaag
     5761 ggctatttta cttgcttcat gtggatgttt atcgtgtcta gaaggagtaa aaaataccaa
     5821 cattaaaagt ctaaaactat aaaaagcggt taaaaaggct gaaattaaaa gaattaagaa
     5881 aattccatga taatgagcga taaaagaata acccaaaatc aaatcttttg agaaaaagcc
     5941 tgctaaagga taaattcctg ccaaagccaa agaacctata gtcataaaaa tagcagtgat
     6001 ttttaaagat ttaaaaagcc cacccatttt tttaatatct aattgatcat ccattgcatg
     6061 cataacattt ccagcgccta agaaaagtaa agatttaaaa aaagcatggg ttactaagtg
     6121 aaataaagct ataccataag ctccaagtcc tgcagccaca aacatatatc caagctgcga
     6181 taaagtagaa taagcgataa tgcgttttaa atccctagcc accaaagcca tggaagctgc
     6241 aaaaatagcc acaaatgctc ctaataaagc gataaaataa gaaacctcag gcactaaaga
     6301 gtaaatttct cctgcacgaa taaccaaata aacccccgca gttaccatgg tagcagcatg
     6361 gattaaggct gaaacaggcg taggtcctgc cattgcatct gcaagccatg tatgaagagg
     6421 aaattgcgcg gattttccca tagctccgat aaataaacaa cttgcaatca aaaccaaagc
     6481 attatgatct aaattttgtg ctatggcaaa tacttcattg tattttaaag tgcctgcttg
     6541 gatataaagc caaaaaattc ccaaaagcat acccaaatcc gcaatacgat tcataataaa
     6601 agcttcatta gctgcaaaag aataggtatt gtttttatac caaaaaccga tcaaaagcca
     6661 agagcaaagc cctacccctt cccagcctac aaaaagtcct aaaaaattat cactcatcac
     6721 taaaaaaagc attgaaaata caaaaagccc taaataagca aaaaatttat taaaatcttt
     6781 atcatgagcc atataaaaaa tactataaaa atgcacacaa gttgctacaa cacccacaac
     6841 actcatcata gtaagagaaa tagcatctat gttaaatcca aagcttaaac ctataaacca
     6901 ctcaaataaa cttacattaa aagcttgatt gttaaaaagt agatacaaag aacaaaatgc
     6961 acttatacca atcaataaag aacatacata agcgacaaaa atttttcttt cacttaaagc
     7021 aaaacaactt gcaaataaaa aagctacaaa agggctaaaa agagaaatca aagctaaatt
     7081 ttgcattatc aaacctcctc ttttaggctc tttaattcta aagtgccttt tcttctatac
     7141 caaagtacgc aaaatgctac acccacagcc acttcgcaag cagccacacc catcacaaaa
     7201 agagcaaaaa cttgtccatt taaatcctga tgcatcttag aagctgcaac aagagctaaa
     7261 tttgctgcat tgagtaaaat ttcacttgaa ataaaaagca taatgagatt ttgtcttttt
     7321 aaaataccga ttaatcctac aataaacatt gcaatagcta taaaaaaata cttttctacc
     7381 attatctttc ctttgtaagc tctttatgtg taagcacgat cgcacaaatt aaagcgatta
     7441 aaagcaaaat agctataaat tcaaaagcta aaagatattt tgaaaaaata gcaaaagcaa
     7501 gttgcttatt ataatcgaat aaatttggat cgcttaaagc taaatcaccc gcgatatttt
     7561 ggtgcttaaa gcctaaaagc ataaacaaaa gcaaaacagc acttaaaatc actaaaagaa
     7621 aaaaactctt cttagctctt aatttttctt taaattcttt ggagctatca aaaaacatca
     7681 tagcaaagct ataaagccca agcacagccc cgctataaac tatgatttgt atcactccta
     7741 aaaactctgc atcaagtaaa aaataaaaac ccgataaaaa aaccattcca ccggctaaag
     7801 cagaaagaga ataaagcata tttttactca aaaccgctac taagaaaaaa cctaaaacca
     7861 ctacactaaa aaatgtaaaa gctaaaattt ctatcattta acttctcctt gtggagctaa
     7921 atttggcaat gtgcattctt catcagtgca taaatttttt tctctttctt gtaaaacttc
     7981 ataataattt ggagtttttt tcacaagtaa atccgcatcc tttctaaggc tacccgcacc
     8041 ctcaaattca acttgatttt taagcttatc aataggagtt aaaaaatctt gtttatagcc
     8101 aaaataagat ctttgttcgg ctgcattttc atactctgtg ccatgaacta tagcaagttc
     8161 aggacaaact tcagcacaaa aaccacaata aatacaacgc cccaaattaa tactataatt
     8221 tcccaccttt ttacgagcat tttcatctaa agaagtttcc atcctgatac aattactgat
     8281 gcaaatcttc tcacaaagcc cacatcctat gcatctttca ttttcacttt ctataaaacg
     8341 cataagacgg tgtacagcgc ggtagcgatt gtcaagcttt accttttcaa agggatattt
     8401 tatggttgcg ctattgtttc tttttagcat ttcacgcata accacccaca atcccacaaa
     8461 aagctctaat ttcacacttc tttttaaagc ttgtgaaatc ttctgccaag tgctagtagg
     8521 agtctttctt ttttcatcaa ttaaataata atttttcatc acaaactcct atataagtac
     8581 tgcaaaggca gtgattaaaa gatttaaaac cgccaaagga attaaaatta aataacacat
     8641 tctcatcact tgatcaggac gaagttgtgg aaaagctgct ctagcccaaa aataccaaaa
     8701 gaagataaaa cttgatttta ctatcatcat aatccagcca ggtataaaat aaaagtcatt
     8761 aaaaccgcct aaaaataaaa gcgtaatcaa aatcgctcct gctatcatag aagcatattc
     8821 tcctatgaaa aacatacccc atctcaaacc cgaatactcc gtaccataac ccgcaacgat
     8881 gtcggcttca ttttcagtta aacaaagtgg agttctattg gtttcgataa ataaagcaat
     8941 cacaaaaagt gcaaaagcta aaggctgttt aaaaataagc catgaaaaaa atccatcgct
     9001 ttgataattg ttaatatcta tcaaagaaaa agatcctaca agcatcacaa tagctattaa
     9061 agcaagggct cctacactct cataagaaat gatagctaca agccctcttg cagcacctat
     9121 gattgaccat ttattgttac ttgcaaggcc acctaaaaat atagcataaa aacaaagccc
     9181 cgaagttcct ataacaaaaa gcaaagccac attaatatca gcaatcaaag gctgtatagt
     9241 gcgtccaaat aatgtaaatt caggaagcat aggaatagcc gctaaagaaa caaaagcaca
     9301 aatagctgca atcaaaggcg ctatagcaaa aatcaatttt tgtgaatttg aaggtatgat
     9361 atcttcttta gtaaaaagtt ttatcatatc tgctacaagc tgaataagtc caaaaggtcc
     9421 taccatatca ggcccaatgc gtctttgaaa ataagccaaa acctttcttt ctgcataagt
     9481 tgcaagtcct gctaaggtag caaaaattgc aatcactata atacacttaa ttaaagcctc
     9541 taaagcaaaa aaagcaaaat cactcatgac tcgctcctaa tttttctaaa tttgccacaa
     9601 taaatctttc atcaaaaaaa cttagcgtgt cgattttttc gtcaaaataa ggtaaaaaag
     9661 ccccattttt tatgtcttta tctatacgca cgctaagact taattcctta tctttaatct
     9721 taagttttac aagatcttta tcttgcaagt ttttttcttt tgccaaattc tgactcactc
     9781 ctaaaaaaat cgcttcattg gttgcacttg cacgatttga aaatctacca aattgataac
     9841 taggatttgc actgtaaagc aaaatttcat cttcttgtaa tgttaaattt tgcaaatggg
     9901 gagctataaa ttcattttta gcactttttt tatggcattc taaatttaaa tcatatcctc
     9961 ttttgcattc tccaccattg gtataaaaat tatcaagact atcaaattcc aaaggagaaa
    10021 aacctttgtt aataggaagt cttttggtgt aattgatcgt atattcctca tcaaaaccta
    10081 aagcattagc caaatcattt aaaaaatatc catcaaattc taaagctgca ttggttggaa
    10141 ctactttttt atcgtaattt aaaaaagtac cctcttgctg atttaaactt gagctagcca
    10201 aattagcatg ttcttcataa gaaaagctaa aatctcctct ttcgttataa cccaaagtct
    10261 tgccttcttg catactctca tccaaatcac aaatcatagc cacacctaag gtatttgtat
    10321 gtgtaggatt taaaaagact ttaaaaggag ttgtattttg gatcaaagct aataatttag
    10381 ccaatttttt agcattttta tgaaaataaa aatcacttcc tataatcaaa gtaaaattag
    10441 cctttttaag caataaatct tctaatttat cctcatctat acccaaattt ttagcaaaaa
    10501 ccgagcgttt tacttctata gtttttttca cttttttagg cacgactttt ttcacttctt
    10561 tagaaatttc attaccctct tcatcttttt ctacaacttg ctctataact tcttcattaa
    10621 tactttcttc tatttcttta ttttcattta caaaaaattc agctaaattt gcttttatat
    10681 tttcatcttg agtgaatttt tgaagtaaga aatataaaat ttgctcctca tctccgcttt
    10741 tgtgagtatg tgaaatgaaa tttttagaat actttgcaat gcctacatct tctataggat
    10801 gaaaataaag tcccgagcct ttattcatca ctaaggcatt gttgatttta tagctaagcg
    10861 taggcgcatc gtatcttaaa agcgttcctg caacgactaa aaaatcactt tttgtgatat
    10921 cttgggttgt agcattataa aactcaccgc cattacttat aaattcttcc aaaaagtctt
    10981 taaattttaa agcttcgtta ttgataagat ttaagccgaa tttctttttg aaattttgca
    11041 aaatcaaagc ttcttcgttt gtgataaagc tattgaattt aatatttcta atctcatttt
    11101 tttcaaaaag ttctacaagc tctttaaaag ctttttcatc cttacttgcc tcattttgcg
    11161 tatcaaaagc aaatcttgca gccttattta aactcgcaaa agcaaaatca ttgcttacgc
    11221 gataaatttt agctttttga ttgctaatac cgctttgttt gacatcataa tacataagct
    11281 cacaatcact tgaatgcgga tttgaagcag gaattctttt taactcccaa atattagaag
    11341 tatattggaa tttagaacct atcaaagccc ctgttggaca tacactagtg cactctccac
    11401 aaaaagaaca atcaagcata tctccatttg cagggcctat caaactcttt tgaaatttcg
    11461 tccaaatcgc ataagcgtct ttacccatac tttctttaaa gctattatct acactatcac
    11521 ctccgcgagg cactgttttt aaagcacttt cgccgatttt atccttacaa actgtgatac
    11581 aacgctcaca cactatacaa agtgcaggat cgtaattaat cattccccaa tgtttatgcg
    11641 gtttatgtgt gtctttaatc caatgtcttt ggatatttac acggctttta tgagtgaaat
    11701 tttgcaattc acactcgcct gatttatcgc aaactccaca ttctaaagga tggttgatac
    11761 aataagcttg catgatctca tttctttcat cccaaagatt ttgtaaatca ctttctacaa
    11821 ccataccctc ttttgcttta gtattgcaag aatacacttt tttaccatca gcctctacca
    11881 tacacatacg acaagccaaa gtcgggctac agcctgaaag atagcaaatt gctgggataa
    11941 aaatatcatt tcttcttgct atatttaaaa tatattcgcc ttcttcaaag gcgcaatcta
    12001 tgccatttat tttaattgtc attttgcttc ctttatgcga attggagtaa aatcaaaacc
    12061 ttgttgatca taatttaaaa aggctatagt gccttgcaaa ttttcatcca aacaaagtgt
    12121 ggttttaaga ctaaaatcct tagccaaaac ttcgacttca cttttatctt tgcattttgc
    12181 aatttgtaaa aactgcttag aacaatgcaa attatcatcc tttaaatttg ctctaaaaag
    12241 caccaaacca tcatagctat cgagctcttt taaagtactc aattttgcat ttttaaaatc
    12301 acattctttt tcattactgt ctaaaatttt aagtttgtat ttttggctta gaaaatttag
    12361 aaaatattta atattttcac tatctttgta agaattaata ttttcatcta caattaagta
    12421 ttttgcattt tctaaaaaat ctaaaatttc actcgcctct tcttcaccaa gacaagattc
    12481 tgcactcaaa tatccctcat ctaagtcttg aaaattatcc atttcgctca tcttacaaag
    12541 caaagctaaa acataactca aacttgcaat ttcacattta taaaatttcg catttaaatt
    12601 cttatcttca aggcaagaaa tataaatatt ttcaccttga attttttcac ataaaatttt
    12661 atttttaaga cttagcatat ccacaaaaca aagcgctctt tcataactca tacgctttcc
    12721 tttttaatca ctatagtcca atccacttga ttaaatttca aggaatttaa aagctcacag
    12781 ccttgttctt ttacaaaaga aaagcttttt tcaacaggag aaaaatcgcc gatttcaaaa
    12841 agcaccacta aaacctcacc ttgttttgct tcttttatga tttgtgctaa atcttcaaaa
    12901 agctctttgc tttttcttaa atctactctt ctcatcgatc tatctcacct aaaactatat
    12961 ttacatttcc cataatggcc acaacatcag ccaaataagt ccccacaagc atttcttcaa
    13021 aaaatgcaca atgccaataa ctaggcgttc tagcctttaa acgataaggt cttcctgtac
    13081 catcactatg gataaaaaag ccaagctcac cttttggact ttcagtaggc acataaactt
    13141 cgcctttagg gggttttaaa ccttgagtga ttaaaacaaa atgctgcatt aaagaataat
    13201 tctgcgttaa aatttgttcc tttgaggcac ttacatactc aggatgcgta gctaaaattt
    13261 caggcggagt atctttataa agcgtggcac attgtctaag gattttcaaa ctttcacgaa
    13321 attcttgcat ataaacttta tatcttgcat aagaatcccc ttgtgtagca taaggcacac
    13381 caaattcaac ttcattataa agcaaataag gctcttcttt gcgtatatcg tattttatac
    13441 cacttcctct taacatcaca cctgtacaac cccaatttaa ggcttgttct ttggtaacca
    13501 cacctacatt ttcagttctt aaacgccaaa ttctattatc atctaaaaga tcttcataat
    13561 cagcgatatc tttaggaaat ttatcgcaaa atgccaaaag ctcatttaaa aaaccttcag
    13621 gcaaatcaag cataactcca cctattctca tagaagaatg tgtaagtctt gctccacaat
    13681 atttttctat caaatccaaa acatactcgc gttctctaaa gcaatacaaa aatacactca
    13741 tcgccccaat atcaagtgcg tgagttgcaa gccaaagcaa atgcgatgcg atgcgattaa
    13801 gctctaaaag tatcattctt atcactgctg cacggcgtgg aatttctaag ccgcaaagct
    13861 tttcaacagc tgcacaataa gcataattat tagccgacgc agcgatataa tccatcctat
    13921 cagttgtcgg gataaactct tgatatatca tattttcagc cattttttcc ataccacgat
    13981 gcatatagcc tatggtaggg cgcgctttta caacctgctc tccatcaagt tctaaaataa
    14041 ggcgtaaatt tccatgtgct gaagggtgct gtggccctaa attaataatc atttttgagt
    14101 cttcttgctc aaaagctata ttttcataat aaggttttaa cttgctagga atttgcattt
    14161 taacgccttt tctctaaaat ttttgcttcg tcgcgtttga ctttttttac aaaagcaacg
    14221 cctccatctt cttgatactc ttgtttaaaa gatacctctt ttctagatcc accttttggt
    14281 acttcatgat acaatcttgc aaaattgagt gtatctttat catctgcaaa acctggatct
    14341 ctttgctcaa ctcctacgac ttcgcgatat tctttaccaa aaattttatc gatctcatac
    14401 cactgcgcaa attcatctcc ttgcaaagga taggttttta aaagaggatg tccataccaa
    14461 tcatcaggca ttaaaatacg ctttaaatta ggatgattta tgataaaaat tccaaacata
    14521 tcataaattt ctctttcact ccaatttgcg cccttaaaaa catgtgctac gctttgcaag
    14581 cgttctttta cacccacaaa agttctaaca cgcactctta atcttttttc taaatttaaa
    14641 agctggtaaa atacttcaaa accattttta tcagctacaa aatcaatagc acttgcttct
    14701 gtaaaattta aatatcctaa ggtatgaagc atttgcaggg ttttaacatt gtcttctttt
    14761 ttgatttcta tcacccaaaa atcaagttct ataaaagaat ttataatatc aacttctgtt
    14821 tttaaaacct cataatcttg cttaaatgca ctctcattga catccaattt ttgagtatgg
    14881 ggtgcatgat aaaacctatc tttataataa ttttgaagct gggcattttt tttatcgcta
    14941 tattttctca tcacaccaac ctttttggag ctattttgcg actagctttt tcttttcgaa
    15001 tttttttctg taaaatcatc aaggcaaact gaaagctttc agggcgtggg gcacagcctg
    15061 gtacataaat atcaactgga atgatcctat ctacaccttg aacggtagaa taagtattaa
    15121 acataccccc tgtatttgca caacttccca tagaaatcac ccatttagga tcgggcattt
    15181 gatcatatag ccttcttgta aattcagcgt gcttcttaca taaagtccct gcgataatca
    15241 tcacttcact atggcgtgga gaagctctaa aaatcgttcc aaatctatca aaatcatatc
    15301 ttgatccccc tgctgccatc atctcgatcg cgcaacaggc gagtccgtag gataaagccc
    15361 acaaagaatt acttctcccc cattgaacaa gcttatctac gcttgttaaa accactggca
    15421 aaccactggc ataatttact tgatgctctg ccatgcaaac gctccttttt tataagcata
    15481 taaaaatcca actcctaaaa gtaaaataaa aacaaatact tctaaaagcc caaaccatcc
    15541 taaatcttta aaaatcaaag cccaaggaaa taaaaacacc acttctatat ctaaaagaat
    15601 aaaaatcaaa gctacgatga agaattggga attaatctta ttagcttgtt ttaccggaat
    15661 tggaccacat tcataaattc caagtcctag ttttttacga ttttttgcag caaaattatt
    15721 gccaatttta gaagctaaaa aaaccaatcc aaaaaaaata acactagcta gcactaacat
    15781 taaaaatata ccgaaataag gatgcgaagc atcaatgtgg gacatttttt ctcctttttt
    15841 taaacacttt gaatcacttc acaacaaaaa ataaaattta cacactttgt tctattttac
    15901 tctaaacttt ctatattgaa acttaataag aataaatatt gtttaaagtt tcattttttt
    15961 acacttaaag ttaacaaaaa acccatcttg atgagtgata aaaatataag aaatcaaatt
    16021 ttcttgctga taatggtata aaaattttaa gatttctttt gaatttttca tatcaagact
    16081 agaagtaatt tcatctaaaa taagcacttt tggctctaag atcaaagcgc ggataagtcc
    16141 cacgcgagtg gcttctcctc cacttaactc atagggtttt tgctctaaaa tttgtttttt
    16201 taagttaaag cgatcaaaaa attctaaaat cttttcttgc tcttttttta tattgaaatt
    16261 ttctagacca tcttggataa gatttttgat ttttttatag gggtttaaag ctgctttttg
    16321 atcctgaaaa caatactgaa tttcttttct taaaagtctt tgttttgttt tatcaagact
    16381 atgaggattt aaatttttat atataatttc tccaaaactt ggattttcta aaaaacaaag
    16441 tattctagct aaagtgcttt ttcctgcgcc actttgccct aaaatcatca aattttcatt
    16501 ctcttttaaa gaaaaattga tattttcaaa aatcaaatgt ttttcttttt tcaaatacca
    16561 atgcttttta aactcataaa atttacctaa atttttaact tcaagcatga taaatcctta
    16621 aaaattcatc cactctaaaa agttgcgctt gatttttttc taaaaaaagc acctcatctg
    16681 ctaaagaatt gactaaattt aaatcatgtg tgatacaaac taagcctaaa gtatttttta
    16741 atttttttaa tatttgaatg attttttgca cattttcttt atctaaagaa gctgtaatct
    16801 catcgcaaat taaaatttga ggcttgctta ataaagctag agctaaactc actcttcttg
    16861 ccatacccaa acttaattca tttgcataag aatgccacaa taaatctaca tcatcaaagc
    16921 ctaatttttc aagcaaatca aaagcatatc ttttacggtc cttttgattt aattttgtat
    16981 gagtttttaa aataagatga aataaatttc ctatattcaa atacggataa aggctaagct
    17041 ctgcatcttg taaaacaagt ccgactttag aacgaaatgc acgaagttcg ttttgattta
    17101 aattgaaaac agaaacttca ttaaagctcc attcatctgc gttgatttca aatttaggat
    17161 caagcagtct gattaaggat tttcccaaaa gactttttcc aaccccactc tcacccacaa
    17221 tcatcaaact cttagctatt ttaatatcaa aacttatatt ttcaaagatc tttttttgat
    17281 ttaattttaa gcttaaattt cttaccttca agatcttact ccaccgattt tttgcaaata
    17341 atttccaagc cataaaaggg gtaagaataa aaacataaga gctaaaagtg gaaacagtat
    17401 catccaccaa gcgcctataa aaatagcttt tgaagattcg tttaacaagg ttcctaaagt
    17461 cggtatatta aaaccaagac ctaagccaaa aaaactcaaa gtcgcttcag tagctatggc
    17521 atgaatgata ttaaatataa aaagaacaaa tattaaagat tttaaagctg gcaataaatc
    17581 cttaaaaaaa gctctaaatt tagtccttcc taacactata cttgctttat aaaagtctaa
    17641 attttctagt ctttttaact cgctttctac aatccttgct ataaaaggcc aatgcactaa
    17701 agcgattaaa aaaatcatta aaaatatatt tacacccaca aaactttgaa aaaacatcat
    17761 caacaaaaaa gcaggcaaag ctaaaaaaag atctaaaatt cgcatccaaa aagtataaaa
    17821 aaaacatctt gctaaaaata aataaaaaag agcaaaaaat atagacaaaa aagaactaca
    17881 aattcctata aataaagaaa ttctcaaagc aaaaagcaaa cgcgaaaata catctctacc
    17941 taaaaaatca gtccctagat aataagtcaa attaggagct tggtgcaaat gatttaaatg
    18001 actttctaaa acatcaaaag gagccagtaa aggcgcaaac aaagcactta aaatcaaaaa
    18061 cattaaaggc gtaagaaaaa gtattatctt aaacaaattt caaccttttt aatcttggat
    18121 ttaaaatcca agcaaaaaca tcgcttaaaa atgtaaaaaa agcagcaagt aaaacactaa
    18181 aaaatatcaa agccaaagcc ataggaaaat ccttaaaaag aatgctttca aaaagcaaac
    18241 tcccaagccc ctcataagca aaaacactct caaccacata agttcccatc ataaaactta
    18301 aagcactgcc tccaaaataa gctataatag ggcttaaaga atatcttaaa accaaaaaat
    18361 aaatatcttt ttcccttaag gctctagcgt ataaattttg aacaaaaatt tgtgaaaaag
    18421 tttcattgat aaaatttcta gctatgcgta aaaacaaagc taaatgagat aaaacaagca
    18481 ctaaaacagg caaaataaga tgttttaagc ggttaaaaaa atcatcttca aagcctatat
    18541 cactagtccc tgttataggc aaaacctgcc aaaaaattcc aaaaatcaaa acaaaaaata
    18601 aagccaaaac aaaaggcggt aaagcaaaaa agttaaaggc tagaaaagtg atcaatttat
    18661 ctataaaact ttctttataa taatgcccca aaagtgccaa aaaaacactg agtaaaaaca
    18721 aaagcactaa ggcgcttagg cttaaaatca aggtatttgc catcctttct ttaatgagct
    18781 ttaaaacact ttccccactt aaaaaagaaa cacttaaatc cccttttaaa gccttaaaaa
    18841 gccaaatttg atactgctct agcaagggct tatccagccc taaattggct tctattcttt
    18901 gaaccaattc cttgctttga gaattgactt tatttgcata cgctacacta cctttactaa
    18961 aataaagcaa aacaaagcat aaaaaagtgc taaaaaatgc gataaaaata ctaaaaacta
    19021 agcgttttag cacttatttt ttactccact cataaatatt ccaagtaaaa cctactccat
    19081 gatggcctaa atttcttgct ttaacaccct caagtttagc attataaact aaggcaaaat
    19141 caagataagt tagaaaaata aaaggaggat tttcatacaa agcatcaata aattctttat
    19201 aatacttttt gcgttcttcc aaatttaaag tatttctagc tttttgtaag gctatatcta
    19261 cctttttatc atgataatgc ccaaaattcc aaccctcatt atttaaagca ctatcttgcg
    19321 aactttcaaa cactctaaag gtatgaaaat caggatctaa aggacttccc caacccacta
    19381 aaaaactatc tactttagaa taatcaaaac tgcccgcagg ctttgctaca accttagcta
    19441 taacccctat ttttttaaac tcgctttgca aaattcctgc caaactcacc cttagaggat
    19501 cattactcat agtccaaatt tcaaattcta aaatcttgcc atctttttca aaaataccct
    19561 catcgttttt cttaaaacct aaagccaaaa tcaaatcttg ggctttttta ggattgtatt
    19621 cataagtttt aaaagcttta gaatccgccc aagaacgctc taaaggatga ttggctacaa
    19681 aaccataatc atgcaaaaga tttttgacta tactttgctt atcaacagca taatttaaag
    19741 cctttcttat ttgaatatct tttaaaaatt cattctctaa attaaacatt aaagctctat
    19801 aatcagcaga tctttcacgc aaaattttaa aattttcatc ctttttaaaa atattcaata
    19861 aagaaacatc aatcaaagcc gcatcaattt tgccattttt aagctctacg cttgcaaccg
    19921 aaggatcaaa aatatgtttg atgataagtc ttggggtttt tacttttgta agataaaaat
    19981 tctcattagc tttaaactct acatattcgc cctttttcca ttttacaaat ttataaggac
    20041 ctgtgcctat gggattttga ttaaaagaag cagtatttaa gtctttatca ctaagtaaat
    20101 gtttaggaag cattcctata cttaaagcat ctaaaaatgc aggaaaaggt ttagaaagcg
    20161 tgattttaag atgataagga tttaaaattt ctatactttt aatatcttca aaattcacat
    20221 aaactgaaga attattttta ggatttttaa aagcttcaag actgaattta acatcatcgg
    20281 cactaaattt cactccatcg tgccacaaaa catcttcacg caaaaagata tcatagctaa
    20341 gtccatcctt gctaacattc cacgacgcag ctaaatcagg ctttaagctc atatgctcat
    20401 caaaacgcgt aagtcctgaa aatacaagat taatcaccgc atcatgatct tcgctatatg
    20461 caggatttat ccttgaaatt tcattttcca cagctacgat taaagtatct tttggaattt
    20521 tagcctcaag attgaaaaac aataaaaata gtaaaataaa ccatctaagc acttgtaact
    20581 cctcaaattt aaaattaaaa aaattataaa ataaaaaata agaagccaca agccctatag
    20641 ggggataatt tgctttaaat tatggatttt atttatcaat taaattgctt ctcactgcat
    20701 tcatccaata aatacgctat atgctgccaa gatatacccg tagcatcgct taatcctatc
    20761 tcgcaagtgc ttgatgtact aaacccgcgc ttaatatttg ttttggcata aaatttttta
    20821 aagccctttg tagcattaat atttaattga ggcttgaaaa agcccttgta tccagcaaac
    20881 ccacaacaat aggtatcatt atctattaat acttttccat tcgtgcatag ctttgcaagc
    20941 ttgattatat tttcatttaa accaagcttt ctagcagcac acatgatata taatcctaca
    21001 ttctcattga ttttatcaat gcgtaactta ggagcaataa attttaataa atactcgctt
    21061 aaatcataaa tttcatactt tgaatgatca ctaattaact tagcactaca agcactatga
    21121 tctaacacta tgggtgagtc tatattgctt aaaaagtcat tgattttttg tatattttta
    21181 tcttgaatat cttgaaaatt ctcataagcc ttaccacaac ataaatcatt gggtgcataa
    21241 ataatgccta tatttgcttt tttacacaag ctttcaaata cttcttgcaa acttctttta
    21301 tcatgcattt tttcatttgg tttaaagctt ttattaagac agcttgtaaa ataaaccaca
    21361 ttgcaagctc ttttacgact ttttaactca taatcattca ccttaggcaa atacgcccta
    21421 gttcttggta taatgctaag aaaattgctt gctttttcga gcttattatc aagacttaaa
    21481 ttatcaaatt tatttgcgat acttaatgaa aatttagcaa tttttagagt tttttcatga
    21541 tttttatatg ctagatttcc taaaatttta gatataaatc ctatattatt ttttctatat
    21601 tttaatgaaa aatcagcaaa attaatcccc aaaggacatg aaaaagagca caccccacaa
    21661 gcagcacaag agctgtctac taaatgattg taatattttt taatatcctt taattttgct
    21721 tttgactcat catcatttaa gctttcaagg cgtttgatct ctcgtaagat cgcaattctt
    21781 tgtcttggag taattgtata ttcatttgat ggacaaaatc tttcgcaaaa tccacattcc
    21841 atacaggtat ttaatttctc atcaatccaa ctggcttgtt tgatattttt cttataaata
    21901 tctttatcat cgctaatgat tacatcggga ttaaataaat tatccttatc aaagatactt
    21961 ttgatttttt tattaatcaa ataagcttgc ttaccccatt ctacctccac aaaaggtgcc
    22021 accatacgcc ctgtgccgtg ttcagctttt atacttccac cataagaagc tactatatta
    22081 gacatttctt taactaaatt tgaaaaatta tcaaattcaa gcttattgtt taaatccggt
    22141 gtgataataa aatggatatt gcctgctaat gcatggccaa aaatgattcc attatcacta
    22201 aaaccatatt tataaaacaa ttcttgaatg cttttaattc catcagctaa atcctcgata
    22261 ttaaaacaca catcttcagt aattaccgtt gagcctgcct ttctaagact agctgctata
    22321 ggcaagagtg cttttctaat cttccaccat aaatcatatt cggccttatt cttactaaaa
    22381 tatgacttat aagctagttt ggaaatttct tttattttat ttatattttc atcaagctta
    22441 agctcattac tatgctcact ttggatcaat acacaagtat taccctcttt aatatcagct
    22501 aaaatatctc ttaactcatc ataatttgat gcagctttta aacttgcata gtccattatt
    22561 tcagcagaac ttataaaatc aactttagca aattctttta tagtgtttgc agcattattg
    22621 atattatcaa aaaacaataa agcacaggcc ttaaattcca aatcatccaa aacagcaagc
    22681 ttaacttcgc ttacaaatcc caaagtccct tcagagccaa caagtaagtg tgctaaaatg
    22741 tctatttcat catcataatc aacaaaggca ttaaggctat aacctgtggt gtttttgatt
    22801 ttaaattttt tgattattaa atcttttaat tctttattag cattaatctc ttctttgatc
    22861 tctctaagtt cattaattaa ttttttattt tcatctttaa atcgagccac acttaaagca
    22921 tcgctggtat caagcatact accatttgcc aaaatcaccc taatacttct taaggtttta
    22981 tagctattat ccttagttcc acagcacatt ccgcttgaat tgttatttat aatccctcca
    23041 attaaagctg aatttatagt agctggatca ggtcctattt ttttcttcaa aaaagcaaga
    23101 ctttcattag catgaatgcc tactacacca catcctaaag taatttcgtt agcgtctttg
    23161 ttaattttta tttttttaaa ggcaaattta atcactacaa gcactccatc acaagagctt
    23221 tgtccactta aacttgtacc tgctgctcta aatgttatag gagttttata agtatttgct
    23281 aattgaataa tttgcttaat ttcatcttca tttttagcaa taatcactat ttttggaata
    23341 taaaaataac acgacgcatc aatgccataa gcatagcatc tagcataatc attaaaaatt
    23401 ctatccttaa aaatatactt agcctcatta taaaaagctt taaaatttgc cata
//
LOCUS       DBBXOW010000021        22860 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.021, whole genome shotgun sequence.
ACCESSION   DBBXOW010000021 DBBXOW010000000
VERSION     DBBXOW010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22860
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.021"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            1088..1537
                     /locus_tag="ACJE1S_000793"
     CDS             1088..1537
                     /locus_tag="ACJE1S_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806357.1"
                     /translation="MAKNKNQNENTTQTNEKSNVTTQTNQNSERISRAEFLRRRIEGK
                     KRTIDLNSNAQVFVSDSIAGTEIFSDLRMLDAMDSTIRKLWGNGVDSKDAETWVKEIN
                     SIKESINELQNKGREILVKVGNVRHISNNVLRRTILREIQAQNVKAE"
     gene            2056..2514
                     /locus_tag="ACJE1S_000794"
     CDS             2056..2514
                     /locus_tag="ACJE1S_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG0806358.1"
                     /translation="MFNQITVIGNICQDIKLSYSQSGVAFLNNAIASSYKYVANDGTV
                     KEEVCYLNFSVFGRLAENMNQYLHKGSKIFLQGRMVQENYTDKEGKNRTNYKIAVETM
                     KFLDSKPTDNNQSGNPYGNVQEPAMPEANQKVQQQVPNNQPRAEGENFPF"
     gene            2620..2826
                     /locus_tag="ACJE1S_000795"
     CDS             2620..2826
                     /locus_tag="ACJE1S_000795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806359.1"
                     /translation="MKDFFKKLSIFTKISTKAILRFMESIGVGLFVNSLYGLQMGDSR
                     AFIILIESLLILAIVALSSIFLKD"
     gene            3082..3372
                     /locus_tag="ACJE1S_000796"
     CDS             3082..3372
                     /locus_tag="ACJE1S_000796"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806360.1"
                     /translation="MGYYPNIVSKYAIEYNYDLKIPQYDYQEFIIALNDLNINYCQSE
                     FNLERVEVDVEQIEQLPLDNFEGDLLILAQTLKTASKFDYARKSGFVIIDFF"
     gene            3509..4405
                     /gene="bet"
                     /locus_tag="ACJE1S_000797"
     CDS             3509..4405
                     /gene="bet"
                     /locus_tag="ACJE1S_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HGG0806361.1"
                     /translation="MDTKTTKNTKITNTQNQAVSTSFTQEKIELIKKHFFPNNATIVE
                     MEYCLNIANKYNLDPFLRQIFFVPRRAQVKINDKKEWVDKIEPLVGRDGFLAIAHKTG
                     KFGGIRSYSEIKQFPRLNNGKWEYIQDLVAVCEVYRTDSDKPFVVEVAYNEYVQKRET
                     GEATSFWTTKPDTMLKKVAESQALRKAFNLSGLYSAEEMGVGMTESDNIIIDVEAYQT
                     NTQENKKKVDFSQNFSQSTATTFSEDERQVLLSLGLEVKNENNYYWIVGNTYGLTDKL
                     KKLGYKYHPDKKTWWKQIENVA"
     gene            4542..5126
                     /locus_tag="ACJE1S_000798"
     CDS             4542..5126
                     /locus_tag="ACJE1S_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806362.1"
                     /translation="MNLQRKIKTIEKEKTKLLKSHKSLLEASNEIDLYNLVIEKEFSK
                     FYKAVNSKYPCRSREWDERMDFAQDYSDILKKIANVERLQSLINKKSKENEDGYKVGD
                     FLYSSWGYEQTNIDFYQVIATTEKTIFLAEVKADVKVTGWERGLKSPCKNALKLDKAA
                     FKTLSNSPKDSRGGGYAKSLYKYKGKALEFTSDY"
     gene            5140..5847
                     /locus_tag="ACJE1S_000799"
     CDS             5140..5847
                     /locus_tag="ACJE1S_000799"
                     /inference="COORDINATES: protein motif:HMM:NF015347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HGG0806363.1"
                     /translation="MKKYKYTPKTKEELKALVKNESIHLGDIDTSKITDMSCLFFKST
                     REDFSGIETWNTSNVEDMSYMFYGCHAFNQDISGWNVSRVRYMNSMFSGCHAFNQDIS
                     GWNVSRVKNMEEMFYGCYNFNQNISSWDVYEVESMSWMFYDCYNFNQDISKWNVFNVA
                     YMENMFWGCKNFNQPLGRWNVSNVKNMVGMFWGCESFNQPLEKWNTSRVKYTDDMFEN
                     CPIDNSNKPEALQELSI"
     gene            5934..6149
                     /locus_tag="ACJE1S_000800"
     CDS             5934..6149
                     /locus_tag="ACJE1S_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806364.1"
                     /translation="MNKNKEKLEKEFWDFVALITLFFICTIIFSFAKLAVLAALCWIM
                     FLLFAFIYPVKWIVQFFLSFFKKKEGR"
     gene            6151..6984
                     /locus_tag="ACJE1S_000801"
     CDS             6151..6984
                     /locus_tag="ACJE1S_000801"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806365.1"
                     /translation="MGTRSWIAMETNSGFYVDRIYCHFDGYVKGVGYTLLQYYNDPKS
                     VKDLIKHGDIRALRQDLSQCEKLQINKSSKMLFTDFVKATEGNRTNDIEYFYLYTQNR
                     WHYCKACEGNILTQELQFNYNKEKLLEETKQYALEKFENNQAFSLDTNSAKFLNYVWE
                     LAYINKDEAYELFEKEMINLKLSSEEIEEALQSLDVEIDEDLSGEYLTRIITQEIFRL
                     YLEGERSSCLIGTFDKKIDNLVQKYFFSYTENLNFDEETTLDEFVKEKQIDLLEAYFE
                     K"
     gene            6999..7625
                     /locus_tag="ACJE1S_000802"
     CDS             6999..7625
                     /locus_tag="ACJE1S_000802"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806366.1"
                     /translation="MSSRSVTNIISVSIDENCNKNIRGSSFSSLYGQIGYNILIGIKT
                     LAEDDFWGKYPHYKDFVEEIFVNQSNLLNQVDYEGTADVVFYKKNNKIFACVRCRVED
                     NNSAFFSDQVVFDEKFIRETSFIHPISYFMDEYISREAIISIDKYIEYRYAEKPNETN
                     SLIKEIVDNFVDFYKVEPLKPNFDFSKFDETLNKIIMSKHFPKTKDEF"
     gene            7639..7887
                     /locus_tag="ACJE1S_000803"
     CDS             7639..7887
                     /locus_tag="ACJE1S_000803"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806367.1"
                     /translation="MEKIIIIAKESDIRVYKNPNDAKEYLKKYFDEFSDKTYTDHDHA
                     SIDSFVDKLDTNENTIGFFVEDNYDLSPVVFTGKIHLL"
     gene            7982..8941
                     /locus_tag="ACJE1S_000804"
     CDS             7982..8941
                     /locus_tag="ACJE1S_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HGG0806368.1"
                     /translation="MNKNKFDEFVAKNLPQALKKDTEQSLGDRSKYVGSSDIGGCLRK
                     AYLDKTTSYEHDLATLIRFQRGHVAEGIIEKMLDGLNPTLQKEVKLTIEGFDLKAHID
                     FCLESKNEIVVVEAKSVNTAVDKPYDSWVMQVNFQLALLATQTQKKLRAYVVAINLNT
                     GWFKSFEINHNQTFEKLAIENAQLLANSLLNKEEPAPSEQLYCSTCPHKKTCPLMMKK
                     SEGSELSGDLLEVGKKIIELNARKKELEKELEEKKALIEEYMRTCGAKKIKVDDSFFS
                     LSNDTTSTSFDTKALKDNEPELYESLFEKYQKTSQRKGYLAIK"
     gene            9040..9645
                     /locus_tag="ACJE1S_000805"
     CDS             9040..9645
                     /locus_tag="ACJE1S_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806369.1"
                     /translation="MTLRELLNFLSDPKNEAFYLNRIKIPMYLVVNPLMLEDEFFVYD
                     DSFKKIWVGKIFKFLSNKSITPSYFIRKDNYDASIDIDLIESTQWQVLKKQISFEATF
                     EEKGKIIGSIDFDRFNDEAKFRIIEKYEDLKAKHKMLCIDFRAKLRSSGHPREVEKEF
                     LEEIHLTTACYDNILLEIEHAFQHYAEHKTLHMKTQTWTYR"
     gene            9661..10074
                     /locus_tag="ACJE1S_000806"
     CDS             9661..10074
                     /locus_tag="ACJE1S_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806370.1"
                     /translation="MKYKKKVFSAINTSFKIAYCYVVEAKCNDHLSEHLRLGIFTSFE
                     EALTFIAKNFYKTTKSKISYSRETNNTWIIDNCEIKNQSIRHRVTDCCIENIAVDARE
                     IRIRVDTNNFIILDNGKLIEISKPFFHDQVAYLNS"
     gene            10165..10776
                     /locus_tag="ACJE1S_000807"
     CDS             10165..10776
                     /locus_tag="ACJE1S_000807"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806371.1"
                     /translation="MKITVDIWKEIPELKNLKKHFSDDEILSLDSYGKYVFSSQEYAN
                     KLVEENKKYYLNTDLENRNSILKQALKLEKNEIKSFLHSDNFIAFIKDMILFSKKYFD
                     KTGAGHYKFFEGLRMPFLDYDFNDTQDRVKIFLTALERGSIAYVCFYEDYLKLEPICN
                     KDMILFVSKNENFSRNCKLPTESIQKLKKELLEYIETNNLSMN"
     gene            10864..11241
                     /locus_tag="ACJE1S_000808"
     CDS             10864..11241
                     /locus_tag="ACJE1S_000808"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806372.1"
                     /translation="MKKINILASSKNSKKLEEGFWFTKDKTIALGNDDSNLDEVYEHL
                     KECIDKSKDLSKFDGECIRVIISANGNYFDEGSESVRFRFNGCGSLGVFHNWECDKHK
                     AFSPLVWKLWSFLHEQIGAAKVA"
     gene            11307..11606
                     /locus_tag="ACJE1S_000809"
     CDS             11307..11606
                     /locus_tag="ACJE1S_000809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806373.1"
                     /translation="MGYRCHIAKHYEVEYENGSYFNNSENKLLSLLEKVGLLEDAWMN
                     EGHEDLEVSRQDTLSLDLEEYVLDEEERGFLEDLIEVAKTAPYAKKSGFIRLSWF"
     gene            11616..11909
                     /locus_tag="ACJE1S_000810"
     CDS             11616..11909
                     /locus_tag="ACJE1S_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806374.1"
                     /translation="MNFKCYIVEKYEIVYGKGHFQNETQKLEDLFEKLQIDYSEPSDF
                     IIEIPTEQLFSLKLSNYQLDSDELIFMTNLIKTAKTAKYCKDFGFIRIDWRGQ"
     gene            11906..12118
                     /locus_tag="ACJE1S_000811"
     CDS             11906..12118
                     /locus_tag="ACJE1S_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806375.1"
                     /translation="MSGFKIIPSKHFAERLQERKVDLSLVASIYQEIAKNPFQKIYKL
                     MNSNSAIVFAVNRDNGVITIITGYPV"
     gene            12131..12622
                     /locus_tag="ACJE1S_000812"
     CDS             12131..12622
                     /locus_tag="ACJE1S_000812"
                     /inference="COORDINATES: protein motif:HMM:NF012487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HGG0806376.1"
                     /translation="MLKMILGTMKAGKSAKIIEEASNILFQDEVIIIRPSCDIREFFT
                     RKHKNSDLQNFTFGNENTSLDSYSFIFVDEIQFFKKDFLEKIINLSRKKEIFITVAGL
                     INDVEGNSWGNVETLKSYADEILHLKADCDCCGRKESAAFHVGDGGINNNYFVFCEEC
                     YKM"
     gene            12755..12928
                     /locus_tag="ACJE1S_000813"
     CDS             12755..12928
                     /locus_tag="ACJE1S_000813"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806377.1"
                     /translation="MSKTQILTDALKQMYEKQEIEKIKRLLIMGFKDAENDEEYQKEQ
                     LELAEAGVGDGII"
     gene            12915..13286
                     /locus_tag="ACJE1S_000814"
     CDS             12915..13286
                     /locus_tag="ACJE1S_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG0806378.1"
                     /translation="MVSSKIVKYGELWIADFEPQVGEEITKKRPALILSNNLLNSNQK
                     LVFVVPLTTWQEEFKKRIWLIKVDKNNINNLNVDSAINCSQIKSFSKDRLIKKIGEVD
                     ERIMENTRNMINVFLSPQFNS"
     gene            13448..13873
                     /locus_tag="ACJE1S_000815"
     CDS             13448..13873
                     /locus_tag="ACJE1S_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806379.1"
                     /translation="MLTYTNELVVARLARALAYKEAKKDKSKVDFLINLFKKQIQNCI
                     KATEHFTDRVSQRFEEVENDTLSVAISRAIRNTSPLQHGADYHIATAQKYLDKDSNIV
                     VVLERQGEFGAVLVTTYKRGQENLLSDEELADLKKRGVL"
     gene            13873..14052
                     /locus_tag="ACJE1S_000816"
     CDS             13873..14052
                     /locus_tag="ACJE1S_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806380.1"
                     /translation="MGIICMFGIFSLVYVLICLFCMLIMMCFGKLKPMSLLRFLMLFL
                     TAPLVWLELILEGKK"
     gene            14082..14864
                     /locus_tag="ACJE1S_000817"
     CDS             14082..14864
                     /locus_tag="ACJE1S_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013890495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HGG0806381.1"
                     /translation="MKKYKYTPKTKEELKALVKDESIYLGDIDTSNITDMSCLFTNST
                     RKDFSGIEKWNTSKVITMAHMFSLCRFFNQDISRWDVGEVENMSYMFHGCHYFNQPLD
                     DWDVRNVETMAGMFWGCESFNQNISKWNVGRVVNMDSMFARCYDFNQPLGDWDVRKVE
                     NMNSMFSSCKSFNQPLGDWDVRKVENMNSMFSSCKSFNQPLDDWDVKSVKSMRFMFHK
                     CYVFNQDISKWDVRKDQYTENTFLDCPIDNSNKPEALQELSI"
     gene            14953..15360
                     /locus_tag="ACJE1S_000818"
     CDS             14953..15360
                     /locus_tag="ACJE1S_000818"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806382.1"
                     /translation="MKNDELVHYINQNFQKDWLKIKNEELVLIYTGELKKNLDNKNIQ
                     SELDLHSNHNEKSFQKFLKSEITYVSNNEKLYPNSFGLTNAPLFIFNRINNKKKQIAV
                     FAYMDYAVFDWVDYLKRYGEVKFSGFLNLLESV"
     gene            15458..17026
                     /locus_tag="ACJE1S_000819"
     CDS             15458..17026
                     /locus_tag="ACJE1S_000819"
                     /inference="COORDINATES: protein motif:HMM:NF025085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HGG0806383.1"
                     /translation="MSANMLKIIKEANQDFEWYPTTEEMINSLINGLNVKYLTSVLDI
                     GAGDGRVLDMLNNKISIDNLYSIEKSELLIQAMSKNILNIGRDFWETSLVEKQVDLIF
                     CNPPYSEYENWMTRIIKEANFDTLAFIVPERWKENIFIQQAIQQRGLDYKIIDSFDFL
                     NAERKARAKVDLIVFKPKPDDKDSFEFFLEERFGFTMPNDRFDKIEKEKKAVDELHSQ
                     CNIIKSEDLVDFLLNKYNEELKLYIDSIENLSKVNNSVLEYLDIDKSKVLKGLEARLK
                     RIKAIYWDELFKKLSPISSKVISRIRSSLSSSVITKAHIEFNRGNIESVLCWFAKNIN
                     EHIELSYLNFFDRLSKENNAFLYKSNQRFDYGNWRYRKSEYDDTDEFKNIKLKLDYRI
                     VVPYLAQVDHWRHNEQTNEFMQDLKVIANNLGFSFSCEFYFKFNAGESGSIYLDNGAK
                     FFEYKAYKNGNVHFKFSQDFMAKFNLAVGRLRNWLTKEEAKEEFKDVSEDIIDEIFDK
                     PLLLDFKNMKLLSF"
     gene            17093..17551
                     /locus_tag="ACJE1S_000820"
     CDS             17093..17551
                     /locus_tag="ACJE1S_000820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806384.1"
                     /translation="MDLKTNEEVKEIVIFLENFLNKYGCDSNREYFCYLKNTFLKHIS
                     IINEIGFDMLEILLDDLITSDRIYYNNDAEIIQDIASKFFSVVLFEAHKEIFGNFLVD
                     FCIKRIYLKDERFVIDIYHSQSKEQLESKIDQFGIVPNQYDLFILSNLIQ"
     gene            17721..19280
                     /locus_tag="ACJE1S_000821"
     CDS             17721..19280
                     /locus_tag="ACJE1S_000821"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806385.1"
                     /translation="MAKFTPEELEELECNFTIIKSNSEVPAIGKNPLEERIIEIFHEM
                     DFQVLKAKDLNDNTIYFLWDEQREKYYLSNSIEKNYLASELKKSGLNFKVQNGYCLIN
                     DLKVIDCLNSTSLEVLIDFLPYDYYEDHEINIDEIFKGENMDKFIEISKDLIKHYGLD
                     NVANETEINALAYALQDCCAMHNEKSELSFTDKQIDDFKSYIVEYHIKGDNEPNNEQS
                     VEDIAYSLHYSMLLSSAPEEIVDDVDRDLFINKVEMGIDGRYQVSFLCDDADSLLKRL
                     KNCIMLGIELNKYIKFCIKNTDNFYELESLEDVFITEEIFNVKKHIENAPSNEVQDKE
                     LALKICSDLDAYYSFYEDAFSKICFDDIKTIKTLQNNDEREEFLKDLLSLSDNEFRIF
                     EEAMEAYKKLSNKKSSNLLLNEILLNLSSLRQSNDSKEIGFIDSFFNDNNTVYSGKVM
                     LNNSNVNVYIQSWKNKDGDLDDEDITEVLDKDFDFLEYAVAEIKGKVIDKILAVKIYE
                     ELNVIKNQLLN"
     gene            19328..20494
                     /locus_tag="ACJE1S_000822"
     CDS             19328..20494
                     /locus_tag="ACJE1S_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HGG0806386.1"
                     /translation="MKYDLERLNNIPIMDVLESLGAISDRNKKIIHCFNITAHKNNDH
                     NASLGVYENTNTCHCFACGVGGNPVNVVKIMFNGNFKEACEYLHTQFNIPFLDGVQAT
                     YKKAFEKPKPKAKDYVFFDPNKEYVEVEKLLPYVQSYSKLTKAQRLKLIYTTIYRFSL
                     STEQKAKNLYYIKRGIREISLVKKIGFLSFDNIKDLENLLKKYFPMEDLIEFKIFSRE
                     KQVWKYAFNVAFVPNFDLYTDMIVGFSLRVIDSTYNGAKEVNISCGNIVFATPFGLEN
                     KPLKECEKVVITEGHIDCLSAKSYYKQDSKTLFISFAGTFSFREEILTVFKGKRIMLC
                     FDKDEAGLNGEKSLSEKLNLLNIENHSLTWDIVDGKDLNDLLLADKMGSIKLIA"
     gene            20555..20722
                     /locus_tag="ACJE1S_000823"
     CDS             20555..20722
                     /locus_tag="ACJE1S_000823"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806387.1"
                     /translation="MTTKKQRKLCIEELASRGIYAYEHDGLVVVSIDEIDQSFILHDG
                     EVIARAKKCED"
     gene            20731..21096
                     /locus_tag="ACJE1S_000824"
     CDS             20731..21096
                     /locus_tag="ACJE1S_000824"
                     /inference="COORDINATES: protein motif:HMM:NF022151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2493 domain-containing protein"
                     /protein_id="HGG0806388.1"
                     /translation="MKLLVCGGRDYTDIEHFNKEMDNVFSLYQNQIDTIIEGGARGAD
                     NMAKNYALKNKINLVEVKADWQHFGKAAGPIRNQRMLSMLDSNDCVLAFWNGVSKGTK
                     NMIEIARNKNIKVIIINIK"
     gene            21116..21730
                     /locus_tag="ACJE1S_000825"
     CDS             21116..21730
                     /locus_tag="ACJE1S_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002801175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806389.1"
                     /translation="MKNNEIFTKAFRFTDEGDLVITLTPDFECFLAENQIKNSQDFAD
                     KFSDTLDENRYFDIPRILCYKEDLKSTPFEDFDNEYFVFVPNDTNIDLDSLSYAVSAL
                     NPSNQKDFLIEAMKTKIKKGEINKENLKENLENKIKYISEQIPIVFEGKVGEDTIEKL
                     LKEKETIVLPNVTKYAKNSINEYFENEKDEILEELNAICKKNMI"
     gene            21761..22167
                     /locus_tag="ACJE1S_000826"
                     /pseudo
     CDS             21761..22167
                     /locus_tag="ACJE1S_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790364.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            22316..22804
                     /locus_tag="ACJE1S_000827"
     CDS             22316..22804
                     /locus_tag="ACJE1S_000827"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806390.1"
                     /translation="MKDDKILLPQKSQFGDKFWLIRDNLAVCENGRIFNYDELGKLIE
                     TQYECILDNVSKASSKKILANIIDLKNIIIDDYFINLIEHTIDGNKFEFSHDMNLIKY
                     KGYVANLNTLEIAGLAQEMEKVGDELILPDFPKRLDENLIREFQALIKLVFRKDCNKI
                     KL"
BASE COUNT         8732 a         2747 c         3989 g         7392 t
ORIGIN      
        1 gttatttttt gataaataat aatagttttt ttccaaaact atttctaaat actaactaat
       61 agatatttga gccttaaaaa ttaacttttt taattattat tacagttccg cattttatta
      121 ttacagttcc gcattttttc aaaaaagaga gtttttttgc ttataaataa cttaagatta
      181 tggagaatag gggtaaaatt attattataa cagttccact tacgaaaaaa taggcattag
      241 aagggtgtga attaaactaa aaaacttaac taaaatttaa tagtatggaa aaatagagat
      301 tttggattat tataacagtt ccacttgtga taaaaatatg gaaaaatagg tatttatatg
      361 gtttttttaa aaaaataata aaaactattg acttttttaa aaaaacaaaa tataatttgc
      421 tcattaactt tttattaagt tcggaatagc aataaggaat gacaggtcca cacctcctgc
      481 cttatatagc tttgtgatga gcgagtcaca tagaaacagg ttgtgatatt gaaattcggt
      541 tagctcttag ccgattaatt cccttctaat tgctgggaag agctggtcaa gaacattacg
      601 atgtggagat cagacagatt cgtaagtctg ctcgcaatta cgctaagata tagtcttaga
      661 tagggttgat ataccaagct ttagtagaaa tactattgtt tcctaattgg ataggtaaaa
      721 aatatcaatt catgagtcag tcagcagcta agattctaag tttaaaatat aatttgaatt
      781 tgcagagttt gctaaagtat tgcttttaac tttaaagggt actaacccaa atttttaaaa
      841 aaattgaaac aaaggatact tttagtatcc ttttaagtta aaacaatacc aaactcacga
      901 gtaaattctg caaattcaaa tttgttttaa atatgaataa agttcagaga ctatcgaaag
      961 ggtatcatct tttttagatg agagaaccaa gtagagtagg ttataagcga tatattcaaa
     1021 tcttttttaa taaccccatt tcattcattt taaactttca aagtatttaa ataaacaagg
     1081 aaattctatg gcaaaaaata aaaatcaaaa tgaaaataca actcaaacaa atgaaaaatc
     1141 aaatgttaca actcaaacaa atcaaaattc agagagaata tctagggcag agtttttaag
     1201 aagaagaatc gaaggcaaaa aaagaactat cgatttaaat tcaaacgctc aagtatttgt
     1261 tagtgattcc atagcaggta ctgaaatttt ttctgatttg agaatgttag atgcaatgga
     1321 ctcaaccata agaaaattat ggggaaacgg agttgattct aaagatgcag aaacatgggt
     1381 aaaagaaatc aattcaatta aagaaagcat caatgaatta caaaataaag gtagagaaat
     1441 tttagtaaaa gttgggaatg taagacatat ctccaataat gttttaagaa gaacaattct
     1501 tagagaaatt caagcacaga atgttaaagc tgagtagttt ttgaaatggg gtaaaaagga
     1561 tttttttata caagataacc caaacggagg ggactgtttt actacagtca agatatagtc
     1621 cgttctttag cgtgagctaa agctgccaaa taagcatttt ggtcctttta atgtttattt
     1681 tggcgtacgc aaagttgcga tttgcgtaga acgcaaagta agtttataca tgggtattaa
     1741 tttaaacgaa taggaatcca ttagatggat aaaggttctt aaataagaac gcaaatttta
     1801 tctcatcttt tggtgaagca tattctttgt gtttttattt aagaatttct tattcttgaa
     1861 gttatacaca aagtatttat tatgatgaca gatttacttg atgaatacat cgctctttta
     1921 gagcataatt taatcccttt tttagggatt tcttttttgt tttataaaag caaaaagaat
     1981 atccctattt agggcgtgtt ctcttttgtt tttataagac aaatgtctta aataaatttt
     2041 tttaaaggag aacacatgtt caatcaaatt acagttatag gtaatatttg ccaagatatt
     2101 aagttgagct attctcaaag tggtgtagct tttttaaata atgctattgc tagtagctat
     2161 aaatatgttg ctaatgatgg cacagttaaa gaagaagttt gctacttaaa cttcagtgtt
     2221 tttggcagat tagccgaaaa catgaatcaa tacttgcaca aaggctcaaa aatctttttg
     2281 caaggaagaa tggttcaaga aaattataca gataaagaag gaaaaaatag aacaaactat
     2341 aagattgctg ttgaaactat gaagttttta gatagcaaac ctactgataa taatcaatca
     2401 ggaaatcctt atggtaatgt tcaagagcct gctatgcctg aagctaatca gaaggtgcaa
     2461 caacaagtac ctaataatca gcctagagca gaaggtgaga attttccttt ctaattctaa
     2521 ataattaaca agcccgctgt tggggtattt ttatcccaac acgggatatt ataccccttg
     2581 acttttagcg ttttttgtta taagataagg agaagaaata tgaaagattt tttcaaaaaa
     2641 ctatcgatat ttacaaaaat atccacaaaa gcaattttaa gattcatgga atctattggc
     2701 gtaggattat ttgtaaatag tctttatggt ttgcaaatgg gcgatagtag agcttttatt
     2761 atcctcatcg aaagtttgct aattttggcg atagttgcgc tatcatcgat ctttcttaag
     2821 gactgatctt tttttgaaaa aaggagagag aatggatggt tatgatatag ctattttaat
     2881 cggtgctatc actcttattt ttggtacatt ggctttagta gctcactatt ttaacgacaa
     2941 acacactaac gaaagtaaaa gctaatcttt agcttttagc ttaacacgcc ctataagttg
     3001 ggaatagatt tttttattcc cttcttgggc aatataaatt tctattcctt ttttatttaa
     3061 aaatacaaaa aaggattaaa aatgggatac tatccaaata tagtttcaaa atatgcaatt
     3121 gaatacaatt acgatttaaa aataccacaa tatgattatc aagagtttat cattgcgctc
     3181 aatgatttaa atattaatta ttgtcaatca gaatttaatt tagaaagagt tgaagtggat
     3241 gttgaacaaa tagaacagtt gcctcttgat aattttgaag gagatctttt aattttagca
     3301 caaacactaa aaactgctag caaatttgat tatgctagaa aaagcggttt tgtgattata
     3361 gatttctttt gaactaattg tgtaacaaca ataaaagctt tttagcttaa cacgccctat
     3421 aagttgggaa tagatttttt tattcccttc ttgggcaata taaatttcta ttcctttttt
     3481 atttaaaaat acaaaaaagg aaataacaat ggatacaaaa accacaaaga atacaaaaat
     3541 cacaaacact caaaatcaag ctgttagcac ttcattcaca caagaaaaaa ttgaactgat
     3601 taaaaaacac ttctttccta acaatgctac aatcgttgaa atggaatatt gtctaaatat
     3661 tgctaacaag tacaatttag atccgttttt aagacagata ttttttgtgc cgagaagagc
     3721 gcaggttaaa attaatgata aaaaagagtg ggtggataaa attgaacctt tagtgggaag
     3781 agatggtttt ttggctattg cccacaaaac gggtaaattt ggtggaattc gctcttatag
     3841 cgaaattaaa caattcccac gattaaataa tggaaaatgg gaatacattc aagatttagt
     3901 tgccgtttgt gaagtttatc gaactgatag tgataaacct tttgtcgtag aagttgctta
     3961 taatgaatat gtacaaaaga gagaaacagg cgaagctact tcattttgga ctacaaaacc
     4021 tgataccatg ctaaaaaaag tagccgagtc acaagcactt agaaaagctt tcaatcttag
     4081 tggattatat tctgctgaag aaatgggcgt tggaatgact gaaagtgaca atattattat
     4141 tgatgttgaa gcttatcaaa ccaatactca agaaaacaaa aagaaagttg atttctcaca
     4201 aaacttttca caatcaactg ctacgacttt tagcgaagat gaaagacaag ttttgttatc
     4261 tttaggactc gaagtgaaaa atgaaaacaa ttattattgg attgtaggaa acacttatgg
     4321 attgacagac aaactcaaaa aattaggcta taaatatcac cctgacaaaa aaacatggtg
     4381 gaaacaaatt gaaaatgtag cttaattcgg taatctcgcg ctagaattat ctagtgctaa
     4441 cttaatttaa attgattcct atggtgggaa tagacattcc cgcttttagg gaatattcta
     4501 ttcctttttt taattatcaa atcaaaaaaa ggaaaaatac aatgaattta caaagaaaaa
     4561 taaaaacaat agaaaaagaa aaaactaaac ttcttaaatc acataaaagt ttgcttgaag
     4621 cttctaatga aattgatctt tacaatctcg tgatcgaaaa ggaattttca aaattttaca
     4681 aagctgtaaa tagtaaatat ccttgcagaa gtagagagtg ggatgaaaga atggattttg
     4741 ctcaagacta cagtgatatt ttaaaaaaaa tcgcaaatgt tgaaagactt caatctctta
     4801 tcaataaaaa aagtaaagag aacgaggatg gttataaagt aggggatttt ctctattcaa
     4861 gttggggata cgaacaaaca aacattgatt tttatcaagt tatagccaca accgaaaaaa
     4921 ccatttttct tgcagaagta aaggcagatg tgaaagtaac aggttgggaa agaggtctaa
     4981 aaagtccatg caaaaatgct ttaaagcttg acaaggcagc ttttaagacg ctttcaaatt
     5041 ctccaaaaga ttcaagaggt ggtggttatg ctaaaagtct ttataaatat aaaggcaagg
     5101 ctcttgaatt tacaagtgat tactaaaaag gataataaaa tgaaaaaata caaatacacg
     5161 cctaaaacca aagaagagct taaggctcta gttaaaaatg aaagtattca tctaggtgat
     5221 attgatacaa gcaagatcac tgatatgagt tgtttgttct ttaaatctac tcgtgaagac
     5281 ttctcaggta ttgaaacttg gaatacttca aatgttgaag atatgtctta tatgttctat
     5341 ggttgccatg ctttcaacca agatatttca ggttggaatg tgagtagggt taggtatatg
     5401 aattctatgt tttcaggctg ccatgctttc aaccaagata tttcaggttg gaatgtgagt
     5461 agggtaaaaa atatggaaga aatgttctat ggctgctata acttcaacca aaacatttca
     5521 agttgggatg tttatgaagt tgaaagtatg tcatggatgt tttatgattg ctataacttc
     5581 aaccaagata tctctaaatg gaatgttttt aatgtagctt atatggaaaa catgttttgg
     5641 ggttgcaaga acttcaatca acctttaggc aggtggaatg tcagcaatgt gaagaatatg
     5701 gttggaatgt tttggggttg cgagagcttc aatcagcccc tagagaagtg gaatacttct
     5761 agggttaaat atactgatga tatgtttgaa aattgtccta tagacaattc aaacaagcct
     5821 gaagctttgc aagaattatc tatttaaaca aatcaagccc taaggtggga tagttttatc
     5881 ccactaggga tacttctatc ctttttattg ttaaaaaata aaaaggaaaa ataatgaata
     5941 aaaataaaga aaaattagaa aaggaatttt gggattttgt ggctctaatt acgctatttt
     6001 ttatatgcac tatcatattt tcttttgcta aattagcagt gttagcagct ttatgttgga
     6061 taatgtttct actttttgca ttcatttatc ctgtcaaatg gatagtgcaa ttctttctgt
     6121 ctttttttaa aaaaaaggag gggagataaa atgggtacaa gatcttggat tgcaatggaa
     6181 acaaatagtg gcttttatgt ggatcgtatt tattgtcatt ttgatggcta tgttaagggt
     6241 gtaggttata ctcttttaca atattataat gatcctaaat ctgttaaaga tttaataaaa
     6301 catggtgata ttagagcttt aagacaagat ttaagtcaat gtgaaaaact acaaatcaat
     6361 aaaagcagta aaatgctttt tacagatttt gtaaaagcta cagagggtaa taggacaaat
     6421 gatatagagt atttctatct ttacacgcaa aatcgttggc attactgcaa agcttgcgag
     6481 ggaaatattc taacacaaga gcttcaattc aattacaata aagaaaagct tttagaagaa
     6541 acaaagcaat atgcacttga gaaatttgaa aataatcagg cattttcctt ggatacaaat
     6601 tcggctaaat ttctaaacta tgtttgggag ttagcctata taaataagga tgaagcttat
     6661 gaattatttg aaaaagaaat gatcaatttg aagctaagca gtgaagaaat agaagaagct
     6721 ttacaaagcc ttgatgtaga aattgatgaa gatttgagtg gtgagtattt aacaagaatc
     6781 attacgcaag aaatttttag attatactta gagggagaaa gaagcagttg tttaatagga
     6841 actttcgata aaaaaatcga taatcttgtt caaaaatact tctttagcta cactgaaaat
     6901 cttaactttg atgaagaaac tactttagat gaatttgtca aagaaaaaca aattgattta
     6961 ctagaagctt atttcgaaaa ataaaaaaag gataaaaaat gagtagcaga tcagttacta
     7021 atattattag tgtgtctatt gatgaaaatt gtaataaaaa tattagagga agcagttttt
     7081 cttcgttata tgggcaaatc ggttacaata ttttaatcgg cattaagact ttagcagaag
     7141 atgatttttg gggaaagtat ccacattata aagattttgt tgaagaaatt tttgttaatc
     7201 aatcgaattt gctaaatcag gttgattatg aaggaactgc agatgttgtt ttttacaaaa
     7261 aaaataacaa gatatttgct tgtgtaagat gtagagttga agacaataac tctgcttttt
     7321 tttctgatca agttgttttt gatgaaaaat ttatcagaga aacaagcttt attcatccta
     7381 tcagttattt tatggatgag tatatctcta gggaggcaat tatttcaata gacaaatata
     7441 ttgaatatag atatgcagag aaacctaatg agactaatag tttaataaag gaaattgtag
     7501 ataattttgt tgatttttat aaagtagagc cactgaagcc aaatttcgat tttagtaaat
     7561 ttgatgaaac tctaaataag attattatgt ctaagcattt tcctaaaact aaagatgaat
     7621 tttaaaaagg agagaaaaat ggaaaaaatc atcataattg caaaagaatc agatattagg
     7681 gtttataaaa atcctaatga tgcaaaagag tatttgaaaa aatattttga tgagttttca
     7741 gataagacat atacagatca tgatcatgct tcaatagata gttttgttga taaacttgac
     7801 acaaatgaga atactattgg attctttgtt gaagataact atgatttgtc tcctgtagta
     7861 tttacaggaa aaatacactt actctgattt tctatacagc cctaagttgg gatagtttta
     7921 tcccactagg gatacttcta tcctttttgt tgttaaaaaa taaaataaaa aggaaaatac
     7981 aatgaataaa aataaatttg atgaatttgt agcgaaaaac ttgccacagg ctttaaaaaa
     8041 agataccgag cagagtttag gagatagatc caaatatgtt ggatcatctg atataggtgg
     8101 ttgtcttaga aaggcttacc ttgataaaac aactagctac gagcatgatt tagccactct
     8161 tattcgtttt caaagggggc atgttgctga aggcattatc gaaaaaatgc ttgatggatt
     8221 aaaccctacg cttcaaaaag aagttaagtt aacaatagaa ggctttgatc taaaagctca
     8281 tatagatttt tgcttggaga gcaagaatga aattgttgtt gttgaggcta aaagcgttaa
     8341 tacagctgtt gataaacctt atgactcttg ggttatgcag gttaattttc aacttgcctt
     8401 acttgcaaca caaacacaaa agaaattaag agcttatgtt gttgctatta acttaaatac
     8461 aggttggttt aaatcgtttg aaataaatca taatcaaaca tttgaaaaat tagcaattga
     8521 gaatgctcag cttttagcca attctctttt aaacaaagaa gagcctgctc ctagcgaaca
     8581 actttattgt tctacttgcc ctcataaaaa aacttgtcct ttaatgatga agaaaagtga
     8641 aggtagtgaa ttaagtggtg atttgctcga agtaggtaaa aaaataattg agttaaatgc
     8701 tagaaaaaaa gagcttgaaa aagaacttga agagaaaaaa gccttgattg aagagtatat
     8761 gcgaacttgc ggtgctaaga aaatcaaagt cgatgacagc ttcttttctt tatcaaatga
     8821 tactacaagc acgagctttg acacaaaggc tttaaaagat aatgaacctg aactttatga
     8881 aagtcttttt gaaaaatatc aaaaaacttc tcaaagaaaa ggttacttgg ctattaaata
     8941 gaacaaagca tgagcaagac attagcaaac aagctagcaa aagaagctcg ataaaaagag
     9001 ctatttttgc tctttaacat tataagcaaa ggaatataga tgacacttag agagttatta
     9061 aattttttat cagatccaaa aaatgaagca ttttatttaa acagaattaa gattcctatg
     9121 tatttagtgg ttaatccatt gatgcttgaa gatgaatttt tcgtttatga tgatagcttc
     9181 aaaaaaatat gggtaggaaa aattttcaaa tttttatcaa ataaaagcat tacgccttct
     9241 tattttatac gcaaggataa ttacgatgcc tctattgata ttgatttgat tgaaagtaca
     9301 caatggcaag tcttgaaaaa acaaataagt tttgaggcta cttttgagga aaaaggcaaa
     9361 attattggct caattgattt tgatagattt aatgatgaag caaaatttcg gattattgaa
     9421 aaatatgaag atttgaaagc caagcataaa atgctatgta tagattttag agctaaatta
     9481 agaagctcag ggcatccacg agaagttgaa aaggaatttc ttgaagaaat acatttaaca
     9541 acagcttgtt acgacaatat cttgttggaa atagagcatg cctttcagca ttatgccgaa
     9601 cataaaacac ttcacatgaa aactcaaact tggacttacc gataaaaaca aaggaaaaaa
     9661 atgaaatata aaaaaaaggt atttagcgca ataaacacaa gcttcaaaat tgcctattgc
     9721 tatgtagtag aggcaaaatg caacgatcat ctttcggaac atttaagact tggtattttt
     9781 acaagttttg aagaggcttt aacatttatt gctaaaaatt tttacaaaac tacaaaatct
     9841 aaaatctctt actcaagaga aacaaataat acttggatta tcgataattg cgaaataaaa
     9901 aaccaaagta ttagacatag agtaacagat tgttgtattg aaaatatagc tgtagatgca
     9961 agagagattc gcattagggt tgacactaat aactttatca ttttagataa tggaaaatta
    10021 attgaaatta gcaaaccttt ttttcatgat caagttgcat atctaaacag ctaagacaaa
    10081 tcaagcccta agttgggata gtcttatccc actagggata cttctatcct ttttgttatt
    10141 aaaaaaaata aaaaggaaaa ggaaatgaaa attactgtag atatatggaa ggaaattcca
    10201 gagttgaaaa atttaaaaaa acattttagc gatgatgaaa tacttagttt agattcttat
    10261 ggaaaatatg tttttagctc tcaagaatat gcaaataagt tggtagaaga gaataagaaa
    10321 tattatctga atactgattt ggaaaataga aattctattt taaaacaagc cttgaagcta
    10381 gagaaaaatg aaattaaatc ttttttacat agcgataatt ttattgcttt tataaaagat
    10441 atgatcttgt tttcaaaaaa atattttgac aaaacagggg caggacacta taaattcttt
    10501 gagggattga gaatgccttt tcttgattat gattttaatg atactcaaga tagagttaaa
    10561 atatttttaa ctgccctaga aagaggcagc attgcttatg tgtgttttta cgaggattat
    10621 ttaaaacttg aacccatttg caataaagat atgattttgt ttgtttccaa gaatgaaaat
    10681 tttagtagaa attgcaaatt acctactgaa agtattcaaa agctaaaaaa agaattatta
    10741 gaatatattg agactaataa tttgtccatg aattaatcaa gccctaaggt gggatagttt
    10801 tatcccacta gggatacttc tatccttttt gttgttaaaa aataaaataa aaaggaaaat
    10861 acaatgaaaa aaataaatat acttgctagc tcgaaaaact ccaaaaaatt agaagaagga
    10921 ttttggttta ccaaagataa aactattgca cttggaaatg atgatagtaa tttggatgaa
    10981 gtttatgaac atttaaaaga gtgtattgac aaatccaaag atttatcaaa gtttgatggt
    11041 gaatgtatta gagtaatcat tagtgctaat ggtaattatt ttgatgaagg aagcgagagt
    11101 gttagatttc gctttaatgg ttgtggttct ttaggagtat ttcacaattg ggagtgtgat
    11161 aaacacaaag ctttttctcc tcttgtttgg aaactatggt cttttttgca cgagcaaata
    11221 ggagctgcaa aggttgctta acggcgcaat ttatttaaat tgctaacaat atacaaaaat
    11281 aattaaatat caaaaaagga aaaattatgg gatacagatg tcatatagca aaacattatg
    11341 aagttgaata cgaaaatggt agttatttca ataatagcga aaataaatta ttaagcttat
    11401 tggaaaaagt tggtcttctt gaagatgctt ggatgaacga aggacacgaa gatcttgaag
    11461 tttctaggca agatacactt tctcttgatt tagaagaata tgttttagat gaagaagaaa
    11521 gaggtttttt agaagactta attgaagttg caaaaacggc accttatgct aaaaaaagcg
    11581 gctttattag actatcatgg ttttaggaga ttaatatgaa ctttaaatgt tacatagttg
    11641 agaaatacga aatagtttat ggtaaagggc attttcaaaa tgaaacacaa aagcttgaag
    11701 atttatttga aaaattacaa attgattatt ctgagccaag tgattttatt atagaaatcc
    11761 ctacagaaca gttgtttagc ttgaaattat ctaattatca attggatagc gatgagctaa
    11821 tctttatgac aaatcttata aaaacagcta aaacagctaa atattgcaaa gattttggct
    11881 ttattagaat agattggaga ggacaatgag tggtttcaaa attattccta gcaaacattt
    11941 tgcggaaaga ttacaagaaa gaaaagttga tcttagcctt gtggcttcga tctatcaaga
    12001 aattgcgaag aatccatttc agaaaattta caagcttatg aatagcaatt ctgctattgt
    12061 ttttgctgtg aatcgagaca atggtgttat cacaataata acaggatatc ctgtttaaaa
    12121 gggagcttgt atgcttaaaa tgattttagg tactatgaag gcaggaaaat ctgctaaaat
    12181 catagaagag gcttctaata tattatttca agatgaagtt atcatcattc gcccaagttg
    12241 tgatataaga gaattcttta cgagaaaaca caagaatagc gatttgcaaa acttcacttt
    12301 tggaaatgaa aacacaagtt tagattcata tagctttatc tttgtagatg aaatacaatt
    12361 tttcaagaaa gattttttgg aaaaaattat taatctttca agaaaaaaag aaatatttat
    12421 aacagttgca ggcttaatca atgatgtaga aggaaattct tggggcaatg tggaaacact
    12481 aaagtcttac gcagatgaaa ttttgcattt aaaagcggac tgcgattgtt gtggtagaaa
    12541 agaaagtgcg gcttttcatg tgggcgatgg tggtattaat aataactact ttgttttttg
    12601 tgaagagtgc tataaaatgt agtttatttt gcacataatt tgtgttataa tttgtgtata
    12661 aaattacaca caaggaaaac acatgcaaag aattaattta actctcaaca gtgaggcaag
    12721 cttaatgctt gataaattag taaaggatct aaaaatgagt aaaactcaga ttttaacgga
    12781 cgcattaaag caaatgtacg aaaagcaaga gattgaaaaa ataaaaagat tgttaattat
    12841 gggttttaaa gatgcagaaa atgatgaaga gtaccaaaaa gaacaacttg aacttgcaga
    12901 agcaggagtg ggtgatggta tcatctaaaa ttgttaaata tggcgaactt tggattgctg
    12961 attttgagcc acaagtaggc gaggaaatca ccaaaaaacg ccctgcatta attttaagca
    13021 acaatcttct taattctaat caaaaacttg tttttgttgt gcctttaaca acttggcaag
    13081 aagaatttaa aaagagaatt tggctaataa aagttgataa aaataatatc aataatttaa
    13141 atgtagattc agccataaat tgctctcaaa taaagtcttt ttcaaaagat agattaatta
    13201 aaaaaatagg tgaagttgat gaaaggatta tggaaaacac aagaaatatg attaatgttt
    13261 ttttaagtcc acaattcaac tcttaatttc tactttttac actacaacta cacaacacaa
    13321 tgttcattat tgaaatatgt tgatataaga atgtagtgct tactaaaact cgcctttagg
    13381 ggatgctttt attccctaaa gggatcatta gtatctctta ttggctaatc aattaggaga
    13441 tgcaaaaatg ttaacttata caaacgagct tgttgtagct aggcttgcaa gagctttagc
    13501 ttataaagaa gctaaaaaag acaagagcaa agttgatttt ttaataaatc ttttcaagaa
    13561 acaaatccaa aactgcatta aagcgacaga gcattttaca gatcgtgtat cacaaagatt
    13621 tgaagaagtc gaaaatgata cattatcagt tgctatttca agagctatta gaaacacctc
    13681 acctttacag catggtgctg actatcatat tgcaacagct caaaaatatc ttgataaaga
    13741 tagcaatatt gttgtcgttc ttgaaagaca aggtgagttt ggagcggttt tagttaccac
    13801 atataaaaga gggcaagaaa atttgctttc tgatgaagaa ttagctgatc ttaaaaaaag
    13861 aggagttttg taatgggcat aatatgtatg tttgggatat ttagtttggt ttatgtttta
    13921 atttgccttt tttgcatgtt aattatgatg tgttttggca aattaaagcc tatgagttta
    13981 ttaagatttt taatgctctt tctaactgca cctttggtgt ggttagagct tattttagaa
    14041 ggaaaaaagt aaatggaata ttggaagaaa aggaaaatac aatgaaaaaa tacaaataca
    14101 cgccaaaaac caaagaagag cttaaggctc tagttaaaga tgaaagtatt tatctaggtg
    14161 acattgacac aagcaatatc accgacatga gttgtttgtt tacaaactct actcgtaaag
    14221 acttttcagg tattgaaaag tggaatacaa gtaaggttat aactatggct cacatgttct
    14281 cgttatgtag attctttaat caagatatct caagatggga tgtgggtgag gttgaaaata
    14341 tgtcttatat gtttcatggt tgccattact tcaatcagcc tttagatgat tgggatgtta
    14401 gaaatgttga aaccatggca ggaatgtttt ggggttgcga aagttttaac caaaatattt
    14461 ccaaatggaa tgtgggtaga gttgtgaata tggattctat gtttgcaaga tgttatgact
    14521 tcaatcaacc tttaggtgat tgggatgtta gaaaagttga aaatatgaat tctatgtttt
    14581 caagttgcaa atccttcaat caacctttag gtgattggga tgttagaaaa gttgaaaata
    14641 tgaattctat gttttcaagt tgcaaatcct tcaatcaacc tttagatgat tgggatgtga
    14701 agagcgttaa aagtatgcgc tttatgtttc ataaatgcta tgttttcaat caagatatct
    14761 caaaatggga tgtgagaaag gatcagtata ctgagaatac ttttttagac tgccctatag
    14821 acaattcaaa caagcctgaa gctttacaag aattatctat ttaaacaaat caagccctaa
    14881 ggtgggatag ttttatccca ctagggatac ttctatcctt tttgttgtta aaaaaaataa
    14941 aaaaggaata aaatgaaaaa tgatgaattg gttcattata ttaatcagaa ttttcaaaaa
    15001 gattggttaa aaattaaaaa tgaagaactt gtattaattt atacaggtga attgaaaaaa
    15061 aatttagaca ataaaaatat tcaaagtgaa ttggatttac attcaaatca taatgaaaaa
    15121 tcttttcaaa aatttttaaa atcagaaata acttatgtat ctaacaatga aaagttatat
    15181 ccaaatagtt ttggattaac aaatgcaccc ttatttattt ttaatagaat aaataacaaa
    15241 aagaagcaaa ttgctgtatt tgcctatatg gattatgcgg tatttgattg ggttgattat
    15301 ttaaaaaggt atggtgaggt taaattttct ggatttttga atttattgga gagtgtataa
    15361 ttttttaatt taataacccc taggtgggat agttttatcc cactagggat acttctatcc
    15421 tttttttgtt ttaaaaatat aaaaaaagga aaaaataatg tcagcaaata tgttaaaaat
    15481 aataaaagaa gcaaatcaag acttcgaatg gtatcctaca actgaagaaa tgatcaattc
    15541 tttaataaat ggtttaaatg taaaatactt aacaagtgtt ttagatatag gcgcaggtga
    15601 tggtagagtt ttggatatgt taaacaataa aatatctatt gataatcttt attcaataga
    15661 aaaatccgag cttctcattc aagcaatgtc aaaaaatatt ttaaatatcg gtcgagattt
    15721 ttgggaaact agccttgttg aaaaacaagt agatttgatt ttttgcaatc ctccttatag
    15781 cgaatatgag aattggatga caagaattat caaagaggct aattttgaca ctttggcttt
    15841 tattgtccct gagcgttgga aagaaaatat ttttatccaa caagctattc agcaaagagg
    15901 cttagattac aagattattg atagttttga ttttcttaat gctgaaagaa aggcacgagc
    15961 taaggttgat ttgatcgttt ttaagccaaa acctgatgac aaagattctt ttgaattttt
    16021 tttagaagag cgatttggat ttacaatgcc aaatgatcgc tttgataaaa tagaaaaaga
    16081 aaaaaaagca gtcgatgaac ttcactcaca atgtaatatt ataaaaagtg aagatttagt
    16141 tgattttctt ctaaacaaat ataatgaaga actcaaactt tacattgata gcattgaaaa
    16201 tctaagtaaa gtaaacaact cagtgcttga gtatttagac atagacaaaa gtaaagtttt
    16261 aaaaggttta gaggcaagat taaaaaggat aaaagctatt tattgggatg aattgtttaa
    16321 aaaattatct cctattagct caaaagttat ctcaaggatt cgttcaagct taagtagttc
    16381 tgtaataact aaagctcaca tagaatttaa tagaggtaat atagaaagtg ttctttgttg
    16441 gtttgcaaaa aatatcaacg aacatataga actatcttat ctaaactttt ttgatcgcct
    16501 ctcaaaagaa aataatgctt ttttatataa gagcaatcaa agatttgact atggtaattg
    16561 gcgctataga aaatcagagt atgatgatac tgatgagttc aaaaatatta aactaaaatt
    16621 agattatcgt attgtagtgc catatctagc acaagtagat cattggagac ataacgaaca
    16681 aacaaatgaa ttcatgcaag atttaaaagt tattgcgaat aatttggggt tttcgtttag
    16741 ttgtgaattt tattttaagt ttaatgcggg agaaagtggt tctatttatt tagacaatgg
    16801 agctaaattc tttgagtata aggcttataa aaacggaaat gttcacttta aattttctca
    16861 agattttatg gctaagttta atttagccgt aggaagattg agaaattggc ttacaaaaga
    16921 agaggcaaaa gaagaattta aagatgttag cgaagatatt atcgatgaaa tatttgataa
    16981 gccattattg ctagatttta aaaacatgaa attgctttct ttttaaccgc ctatgctcta
    17041 gcgagatagt ttttttgcta gagattttct atttttataa aaaaggaaaa atatggattt
    17101 aaaaacaaat gaagaagtaa aagagattgt tatattttta gaaaattttt taaacaaata
    17161 cggatgtgat tctaatagag aatatttttg ctacctgaaa aacacatttt taaaacatat
    17221 ttctataata aatgaaatag gttttgatat gctcgaaata ttgctagatg atctaattac
    17281 aagtgataga atctattaca ataatgatgc tgaaattatt caagatatag ctagcaaatt
    17341 ctttagtgtt gttttatttg aagcgcacaa agagattttt ggtaatttct tggttgactt
    17401 ttgtatcaaa cgcatatatc ttaaagatga gcgatttgta attgatattt atcatagtca
    17461 aagcaaagag caattggaaa gcaagattga tcaatttgga attgtaccga atcaatatga
    17521 tttgtttatt ctttcaaatt taatacagta gatctctgat tattttaaag ccctaagttg
    17581 ggatagtttt atcccactag ggatacttct atcctttttg ttgttaaaaa ataaaaagga
    17641 aaatacaatg aaaaaataca aatacacgcc taaaaccaaa gaagagctta aggctctagt
    17701 tgaaactgta aggattacta atggctaaat ttacccctga agaattagaa gaattagaat
    17761 gtaattttac aatcattaaa agtaactctg aagttcctgc tataggaaaa aaccctctcg
    17821 aagaaagaat tattgaaatt tttcatgaga tggattttca ggttctaaaa gcaaaagatt
    17881 taaatgacaa tacaatctac ttcttatggg atgaacaaag agaaaaatac tatctttcaa
    17941 actcaataga aaaaaattat ttagctagtg agttaaaaaa gagtggttta aatttcaaag
    18001 ttcaaaatgg ctactgtttg attaatgact taaaggttat cgattgctta aattctacct
    18061 ctttagaagt tttaatcgat ttccttccgt atgattatta cgaagatcat gaaatcaata
    18121 tcgatgaaat ttttaaagga gaaaatatgg ataaatttat agaaatatca aaagatttaa
    18181 ttaaacacta cggcttagat aatgtagcaa atgaaactga gattaatgcc ttagcttatg
    18241 ccctacaaga ttgttgtgca atgcacaatg aaaaaagtga gctaagcttt acagacaaac
    18301 aaatcgatga ttttaaaagt tatattgtcg aatatcatat taaaggcgat aatgagccta
    18361 ataatgagca aagcgtagag gatatagctt atagcctcca ttattcaatg ctgctaagct
    18421 cagctcccga agagattgtc gatgatgtag atagagatct tttcattaat aaagtcgaaa
    18481 tgggaattga tggcagatat caagtttctt ttctttgcga tgatgcagat tctttgttga
    18541 aaagattgaa gaattgtatt atgcttggga tagagcttaa caaatacata aaattttgca
    18601 ttaaaaatac agataatttt tatgagcttg agtctttgga agatgttttt attactgaag
    18661 agatttttaa tgttaaaaaa catattgaaa acgctccaag taatgaagtt caagataaag
    18721 agttagctct taaaatttgt tctgatttgg atgcctatta tagtttttac gaagatgctt
    18781 tttcaaaaat ttgttttgat gatattaaga caattaaaac acttcaaaac aatgatgaaa
    18841 gagaagaatt cttaaaagat ttattgtcac taagtgataa tgagtttagg attttcgaag
    18901 aagctatgga ggcttataaa aagctaagta acaaaaagtc ttctaattta ctattaaatg
    18961 agattttgct caatttaagc agtttaaggc aatcaaacga tagtaaagag ataggtttta
    19021 tagattcttt ctttaacgac aataatactg tgtattcggg caaagttatg ctaaataata
    19081 gcaatgtcaa tgtttacata caaagttgga aaaacaaaga tggtgactta gatgatgagg
    19141 atattacaga agttcttgat aaggattttg attttttaga atatgctgtt gcagaaataa
    19201 aaggcaaagt tattgacaaa atcctagcag tgaaaatata tgaagagctt aatgtaatta
    19261 aaaatcaact tttaaactaa acttcgcatt agtctttaag gctaatgcta atatgtaagg
    19321 agaattaatg aaatatgatc ttgaaagact taacaatatt cctattatgg atgtgctaga
    19381 gtctttaggt gcaattagcg atagaaataa aaaaattatt cactgcttta atataactgc
    19441 acacaaaaat aatgatcata acgcttcttt aggcgtttat gaaaatacaa atacttgcca
    19501 ttgttttgca tgtggagtag gtggaaatcc tgtcaatgtt gtaaaaatta tgtttaatgg
    19561 caatttcaag gaagcttgcg aatatttgca tacgcaattc aacattcctt ttttagatgg
    19621 agtgcaagca acctataaaa aagcatttga aaagcccaag cctaaagcta aggattatgt
    19681 attttttgat ccaaataaag aatatgtaga agttgaaaaa ctacttcctt atgtgcaaag
    19741 ttattcaaag ttaacaaaag cgcaaaggtt gaaattaatt tatacaacta tctatcgctt
    19801 ttctttatct actgagcaaa aagcaaaaaa cctttattat ataaaaagag gaattaggga
    19861 aataagcttg gttaaaaaaa ttggtttttt aagttttgac aatattaagg atcttgagaa
    19921 tcttttaaag aaatattttc ctatggaaga tttaatcgag tttaaaattt ttagtagaga
    19981 aaaacaagtt tggaaatatg cttttaatgt cgcttttgtt ccaaattttg atctttacac
    20041 agatatgatt gtaggtttct cacttcgtgt tattgatagt acatataacg gagctaaaga
    20101 agtgaatatt tcctgcggca atattgtttt tgcaacgcct tttggtttag aaaataaacc
    20161 attaaaagag tgcgaaaaag ttgttattac tgaagggcat attgactgtc tatcagcaaa
    20221 aagctattac aaacaagatt caaaaacctt gtttattagc tttgcaggaa ctttcagttt
    20281 tagagaagaa atacttaccg tgttcaaagg taaaagaatt atgctttgtt ttgataagga
    20341 tgaagcaggg ctaaatggag aaaaaagttt aagtgagaaa ttgaatcttt taaatattga
    20401 aaaccatagt cttacatggg atatagtaga tggaaaagat ttaaatgact tacttttggc
    20461 agataaaatg ggcagtatta agcttattgc gtagcaataa agagcgtaaa ttactgcaga
    20521 attgcaaatg caattaactt agaaaaggaa aaagatgaca acaaaaaaac aaagaaaatt
    20581 gtgcattgaa gagttggcga gtagaggtat ttatgcttat gagcatgatg gtttagttgt
    20641 cgtgagtatt gatgagattg atcaatcttt cattttacac gatggggaag ttattgctag
    20701 agcaaaaaaa tgcgaagact aggagattag atgaaactat tagtatgtgg tggaagagat
    20761 tatacagata tagaacattt caataaagaa atggataatg tattttctct atatcaaaat
    20821 caaatagata ctatcattga aggtggggct agaggtgctg acaatatggc taaaaattat
    20881 gccttaaaga ataagattaa tcttgttgaa gtcaaggcag attggcaaca ttttggaaaa
    20941 gctgcaggtc ctattagaaa tcaaagaatg ttatctatgt tagatagcaa cgattgtgtt
    21001 ttggcttttt ggaatggagt ttcaaaagga acaaagaata tgatcgagat agctagaaat
    21061 aaaaacataa aagtaataat catcaacata aaatagaata aaaaaggaga aaacaatgaa
    21121 aaacaatgaa atttttacaa aagcttttag atttactgat gaaggtgatt tagttatcac
    21181 tttaacacct gattttgaat gctttttagc cgaaaatcaa atcaaaaata gtcaagattt
    21241 tgcagataaa tttagtgata ctcttgatga aaatagatat tttgatattc caagaattct
    21301 ttgttataaa gaagacttaa aaagcacgcc ttttgaagat tttgataatg aatattttgt
    21361 gttcgttcca aatgatacaa atattgactt agacagctta agttatgctg ttagtgcttt
    21421 aaatccttca aatcagaaag attttttaat tgaagccatg aagacaaaaa ttaaaaaagg
    21481 tgaaatcaat aaagagaatc taaaagaaaa tttagagaat aaaatcaaat acattagtga
    21541 acaaattcct attgtttttg aagggaaggt aggtgaagat acaatagaaa aacttttgaa
    21601 agagaaagaa actatcgtgc ttccaaatgt aacaaaatat gcaaaaaata gcattaatga
    21661 gtattttgaa aatgaaaaag atgaaatact tgaagaatta aatgctatat gcaaaaaaaa
    21721 tatgatataa tcaaggagaa atacaatgca aggcaatata gtgagaaatt attatatttc
    21781 agaaggtgta aaagctttat tttctgtcta ttttaaagat caaactgaag aaaatttcat
    21841 taaagctctt aatgaattta acaaagaaaa tcaaataaat tctcaagaga taaaagatga
    21901 agctcttaga gaaattaaag aagagctttc aaaattagca actacagatc ttttgaatgc
    21961 taaaatcgat aaggttgaag ccaaaatcga taaggttgaa gcttcattga atgctaaaat
    22021 cgataaggtt gaagccaaaa tcgataaggt tgaaaacaag ctagatagtt ttaaaacaga
    22081 agtcaaaaca tatgtaatta ttcttgctgc tttaatgttt ttttgcagcc tacaattttt
    22141 gatttaatta aatctatttt taaataattt tttagagaag caaggtttta ttccttgctt
    22201 gctcaacctt ttttctttta aagttcttta cgaagaattt caaaagaaaa aatttggttt
    22261 ttgaaatcaa aagtattttt tgctagaatt taaaaaaata aaaaaggcaa aaaatatgaa
    22321 agatgataaa atcttattac cccaaaaaag tcaatttggt gataaattct ggctaatacg
    22381 agataattta gcagtttgtg aaaatggcag aatttttaat tatgatgagt taggaaaatt
    22441 gatagaaact caatacgagt gcattttgga taatgtttct aaagcaagtt ctaaaaaaat
    22501 tttagcaaat ataatagatt taaaaaatat catcatcgat gattatttta taaacttgat
    22561 agaacataca atagatggta ataaatttga atttagccat gatatgaatt taatcaaata
    22621 taaaggctat gtagcaaatt taaacacttt agagattgca ggactagcgc aagagatgga
    22681 aaaggtagga gatgaactga ttttgcctga ttttccaaaa agactagatg aaaatcttat
    22741 aagagagttt caagccctga taaagttagt ctttagaaag gattgtaata aaattaaatt
    22801 gtagaaaacg cactttttaa cgaataaacg ctcaggtgaa gtgctaaacc tttattttag
//
LOCUS       DBBXOW010000022        22269 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.022, whole genome shotgun sequence.
ACCESSION   DBBXOW010000022 DBBXOW010000000
VERSION     DBBXOW010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22269
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.022"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..1109
                     /gene="dnaJ"
                     /locus_tag="ACJE1S_000828"
     CDS             <1..1109
                     /gene="dnaJ"
                     /locus_tag="ACJE1S_000828"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HGG0806391.1"
                     /translation="EILEITQSADKDTIKKAYRKMALKYHPDRNQGDKEAEDKFKLVN
                     EAYEVLSNEEKRAIYDRYGKDALKGGGFGSGGAGFGGFEDLGDIFSSFFGGGFGGASQ
                     RRKKSSDEKFQAELVVNLKLSFKEAVFGCKKNIDFTYKSSCKTCSGTGAKDGKLQTCP
                     KCKGRGQVGISQGFITFAQTCPDCKGSGESASEKCKDCKGKGYEELKDSVEVNIPEGI
                     DNGMNLRVAAKGNLSKSGDRGDLYVKVIVEEDDTFIRDDEDIYIEFPVFFTQAILGQS
                     IKVPTIRGEATLNLPKGAKDGQRFVLEREGVKDVHSSRIGNQIVQIAIKFPNSLNDEQ
                     KELLEKLSESFGIKDGMHHEQKGLFEKITHWFKS"
     gene            complement(1249..2499)
                     /locus_tag="ACJE1S_000829"
     CDS             complement(1249..2499)
                     /locus_tag="ACJE1S_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HGG0806392.1"
                     /translation="MKLVKLSLVAALAAGAFSVANATPLEEAIKDIDVSGVLRYRYET
                     GNEWSDINGVAPNEGGNISGKQDHKYRAQLNFSGAIADNFKAFVQLDYNAKDGGYGTN
                     NGSTTRAYAADNSSTLNVRQLYLTYTDENVATSVILGKQQLNTIWTDNAIDGLVGTGV
                     KVVNNSIDGLTLAAFAVDSYNSDEQGGELGKVLNFSENLYGAAAIGSYEVFNGQLNPQ
                     LWLAYMTDNAFFYALDAAYNTTIFDGVNWTLEGAYLGNSLDNEHKDLGNGNGNFFALN
                     GSIEVNGWDATLGGLYYGKKDKATVTVIEDQGNLGSLLAGEEIFYTKGSKLNGDTGRN
                     IFGFVKAGYTFNETVRLGADFVYGGTKTEAGNGGDKLEAVARVDYKYSPKLNFSAFYS
                     YVNVDKDTDSTHRDAVRLQALYKF"
     gene            complement(2781..4124)
                     /locus_tag="ACJE1S_000830"
     CDS             complement(2781..4124)
                     /locus_tag="ACJE1S_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG0806393.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCVAMILIGIPVILAENVIGRKSMTNSVDTFKGKWKFVGYMGLLGSFGIMAYYMVLGG
                     WVFVYVFELIIGNFDLSHTVTKDFTEYFFNEKISFNPLGVGIFTTLFVLINYIILRRG
                     IIDGIEKSVKFLMPLLFICLILVVGRNLSLEGAINGVKFYLTPDFDKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLSKNENMAKTAIYTGVLNTLIAVLAGFMIFPALFAAGL
                     EPDKGPSLVFQTLPIAFSHIHFGTIICILFFILLLIAALTTSLPIYQVIISVLEEKFK
                     LSKKTAINLTLGSIFILGNIPCILTYGPWRDITLIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWVLGKEQSIKELSNEGKLKSMGFKIWFYYIKFIIPLIIFAIFIYGIAN"
     gene            complement(4175..4843)
                     /locus_tag="ACJE1S_000831"
     CDS             complement(4175..4843)
                     /locus_tag="ACJE1S_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HGG0806394.1"
                     /translation="MKLKSLQIGHIKDYKGFKSAFIKDLYLEEVDINSLGILNDNIAD
                     TKHHGGKNKALFANSYHNYALWENFLGKKLACGMMGENLTLENLHEQNVCIGDIHRFE
                     NAILQVSEPRKPCVKISKVHQNPNFTQEIFKTGLSGWYYRVLEGKKIHAHSKIELIEK
                     NPINLSVLELNHLFYNPHQALKQNPSLLEKLSKLDTLISQNWHETIQKRLKNTYNLDY
                     MQNL"
     gene            complement(4840..6540)
                     /gene="dsbD"
                     /locus_tag="ACJE1S_000832"
     CDS             complement(4840..6540)
                     /gene="dsbD"
                     /locus_tag="ACJE1S_000832"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HGG0806395.1"
                     /translation="MRFIFTLLFTCYFLFASVLSLNEAFEVKSSSYDSAVSIDIKLGK
                     DIYLYSNQLKLYLNQNDISSLINLPPSTQRLNEKVYYQDLNLALPNLLLERFAQNQNN
                     QIKLQFQGCSEQGLCYNPQTWYFDLKHKDNKFEISAPYKEKQKTLSAKSEESMIANFL
                     ATDNLFWILLSFLGYGLLLSLTPCILPMIPILSSLIVAKSETKFSKKHSFFLSFIYVF
                     FMSLAYAIVGVIASFLGASVQGLLQKPSVLIFFALIFVLLALAMFESFRFELPLKFQN
                     FLHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLTGALIYIANTGDALLGASALFIMS
                     FGMGIPLLFIGLGLGFLKAGAWMQKVKIFFGFVMLAMAIWILSRIIETRYILIAFGIL
                     GVFFSVFMGIFEQAFNAVAKIKKSLLILVLAYSLSIFLGGIFGAKNFLNPLNLNQNMP
                     LNSSKLNYNFINDLNTLQKEIKTSTRPIMFNFTASWCENCKLLDELTFSDERIQEKLK
                     NFHLIKIDLTQNSDKDLEIMKEFGVFGPPVLIFFEKGKENLRITGFISAHDLLQKLEK
                     "
     gene            6635..7516
                     /gene="ppk2"
                     /locus_tag="ACJE1S_000833"
     CDS             6635..7516
                     /gene="ppk2"
                     /locus_tag="ACJE1S_000833"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HGG0806396.1"
                     /translation="MQEKVPAKIQEETKKDEIYVSVKKKKSTIEYEKDLKNLQIELLK
                     FQNYVKAKGLKVLILIEGRDAAGKGGAIKRLIEYLNPRGCRVVALEKPSDVEKTQWYF
                     QRYVTHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSNLM
                     FFKFYFSVSKEEQKKRFEKRRIDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVDYADKKIGDFSKIDQDLVRSGEEEIRKMEAN
                     LEKIDNKKADEKIKDLD"
     gene            7521..8711
                     /locus_tag="ACJE1S_000834"
     CDS             7521..8711
                     /locus_tag="ACJE1S_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HGG0806397.1"
                     /translation="MLERVKNLSDKYYEKIVNLRHQIHMHPELEFEEENTARLVCEIL
                     DEYGIKYEKNIAKTGILASIEGRKPSTKKAQCVLLRADMDALPVQEETNLSYASKING
                     KMHACGHDGHTAGLLGAVLILNELRDEFSGTIKFMFQPAEEGSGGAKPMIEAGILENP
                     HVDAVFGCHLWGPLLENTAQIVSGEMMAGVDVFDLEFIGKGGHGAHPHTTIDPIVMAS
                     KFVSDVQCIISRRLRPVDAGVITIGKFHAGTTFNVIPQNAILQGTVRFLSDENQKLLQ
                     SSIENTARAVALEFGGDFKLDYKREYPPLINDENAAKIARKAFGKVLGEQNIISVAKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLKNPTLHHSSTFCWEDENLKVLMQGDSMMALE
                     FLNS"
     gene            8793..9965
                     /locus_tag="ACJE1S_000835"
     CDS             8793..9965
                     /locus_tag="ACJE1S_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0042802 - identical protein binding
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HGG0806398.1"
                     /translation="MKNRVVLIVVILALFGVGAYFIFFNDNEKITYLTQKVKKIDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGSHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNFYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDQ
                     MEVRMEIAEADVGKIKIGTELDFSLLSDPQKTYQASIASIDPADTQISDSSTSSGSSS
                     SSSSSSSSNNAIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKDVIAVPTYAIKNDAK
                     GYYVEILQDQKAVKKYVKLGIKDSVNTQILEGLSEGELLVVSSSGDNAAPKLRLRF"
     gene            9965..11890
                     /locus_tag="ACJE1S_000836"
     CDS             9965..11890
                     /locus_tag="ACJE1S_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806399.1"
                     /translation="MIFLNNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDEPSSGSYIFDDYEVTQLNSDEKARLRREKIGFIFQRYNLLNLLSANDNVAL
                     PAVYAGKKVQERNFRAQELLGNLELEHKIESKPNELSGGQQQRVSIARALMNGGELIL
                     ADEPTGALDSKSGIMVLEILKKLNTQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDS
                     KKDKIVYQGQVKSMPKEKKTLTLLKNQAFECLKIAYSSILAHKLRSILTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLD
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLKLQVGRILNNEDIETNANV
                     AVLDFNAKKNLFPRQKSEDVLGRVVIFNSQPFKIIGVLQKDTEKPIEDNVVRLYMPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAVIRILEIKRGQRDFFTFNSDTFKQAIT
                     ANKRTTTILTASVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICSMGAILGVLLSVFVIFGFNTLSTDFPMILNAYSVLLGLLSSVLIGVIFGFF
                     PARNAANLNPISALSKE"
     gene            11892..13256
                     /locus_tag="ACJE1S_000837"
     CDS             11892..13256
                     /locus_tag="ACJE1S_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HGG0806400.1"
                     /translation="MKNLLSILLAFFLSACGVKLSLPKEPTMSEESFKDLNITYDWYK
                     AYDNAKLNEFLNFVLLNNSDINIARSTLLTALARADLIDYDFYPTLSANLGLSGEKNL
                     NSGVQSKKFSNSLNLSYELDIYGRIRDSSSASDFSAKASAYDLENLKISMINTALNGI
                     FELAYFNDVDNLLKEYLANLEQMRELYAYKFELGKIEELDLLNIEQNLLKARQDLLRN
                     EQNRNLLIKNLQDLIGKQEGFAYIDYFKALTLSDFKNLNPNFNIPLEALVYRPDVRSK
                     LNTLKSAFKDYTSVQKSIFPSISLGGALNGSDKQFDDSFKFEVLSGNIKISLPFLDYG
                     RVKQNIKISQFDYESALVNYEQSLQSAMNEFALNYKDYQSNTMLLQILKDTSFKQELI
                     TQAYWEKYNLGKSELKDYLDASNTLNSAKQSLLGARFTLLKTINSYYQITALNYDERN
                     LEMP"
     gene            complement(13327..14496)
                     /locus_tag="ACJE1S_000838"
     CDS             complement(13327..14496)
                     /locus_tag="ACJE1S_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HGG0806401.1"
                     /translation="MQIKQFKAILLILIFSINLYANNTNHTIDEILSQTKNKSALSNY
                     ASKKDLKLLEQKLKEHKNIGIRIYGDSHTAADFFPRVIRGYLIKSNSIGFAYPLQPKY
                     QQNLNLDYSYKDYEILNSRNTDTAGIDFPLGGIIAKAKEKGAKITLDTNLDKKKFKVG
                     FVFKAPNNTNAFSIKDAQNKSYELRSVANKWSYKEYELVFPLQISALQKNAQLGGYFI
                     TSKEDNAYLDTIAINGAKSDLWMSWNKKVSEQELKLLSNDLILLAYGSNDALFKGFEK
                     NKFKKNLKDWIHTLKTYNKNALIMLVSPPTVVKKQGKKYTLAPDFFAIRQALYEVAKE
                     EKTLLFDMHQFMQDSGGKNKWIEQKLSLQDVHLTIKGYELMAKKLLDDLKKYVHY"
     gene            complement(14486..15466)
                     /locus_tag="ACJE1S_000839"
     CDS             complement(14486..15466)
                     /locus_tag="ACJE1S_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HGG0806402.1"
                     /translation="MKMIKFFFILIIVFVLVCLVMNQSIFSYIEQKYHFTFYPKNDIL
                     QEANGFKNKLEQIRAILSNEPLPQNIEENIMVQEDMDELNASNDFIDKNTTIEDIQQT
                     EDENVSFIDNTKLEVHKGDEFLFIGDSLMQGVAIALNRDLIDLGLKANDLSKQNTGLS
                     YKSYFDWAKATKEAFAKNPNIKYLVVLLGANDPWDIKKGGVYHRFGSDSWIDIYTYRV
                     NEIINIAKQHHAKILWFEIPPVKKNELNEKIQILNKIYSEEILKNKQIFINTKLFFSV
                     NDEFSTYIKNENNKSIKMRTDDGIHFTSNGAKEMSKLLLQHITIKEENAN"
     gene            complement(15467..16843)
                     /locus_tag="ACJE1S_000840"
     CDS             complement(15467..16843)
                     /locus_tag="ACJE1S_000840"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HGG0806403.1"
                     /translation="MTYFSLEFSILMIVFFAIYWAFKDNYKIQNILILAFSYLIYILI
                     NPYFALILFIYTFFIHFFALLIFVRRKRYIFATCITFIILNLCFFKYFPNIKGSLDQV
                     LSFLGLDFLNIELILPIGISFYTFASITYLVDVYKKHHLESFLNLATFLSFFPTLLAG
                     PIMRSAFFFEQAYQKREFKHANLIIILLIFGIVKKVLIANYLGIYAKNILDFPQSYNF
                     IQLLSAIYAYAVQIYCDFSGYVDLVCAFALMLGFTLPPNFNMPYLAKNLKEFWARWHI
                     SLSTFIRDYIYIPLGGNRKGMPRTVANILIAFILSGLWHGSTLAFGVWGLLHGLGIVF
                     IHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYNKNLEDALEYFKACYNNFFQIPS
                     YNDIYMLASFAVLFMIYPLFVNFREYCVRILNLTPFLLKPFVITFILLLVFAFMPNGI
                     PDFIYSSF"
     gene            complement(16893..17393)
                     /locus_tag="ACJE1S_000841"
     CDS             complement(16893..17393)
                     /locus_tag="ACJE1S_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HGG0806404.1"
                     /translation="MLSKKVVDLLNEQINKEMYAANLYLSMSSWCYENSLDGAGLFLF
                     QHASEESEHARKLITYLNETDSHVELKEVKQPEQNFKSLLDVFEKTYEHEQSITKSIN
                     DLVEHMLGNKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLISDNGNGLYLADQYIKN
                     LALSKK"
     gene            17732..18727
                     /locus_tag="ACJE1S_000842"
     CDS             17732..18727
                     /locus_tag="ACJE1S_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HGG0806405.1"
                     /translation="MKKILALSVASFALAGALNAADLKIAGSSTVYPFTSFVAEEYAA
                     IHNTKTPIVESLGTGGGFKVFCEGITDISNASRAMKFSEFETCKKAGVTDIVGIMVGY
                     DGIVLAQNKANAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTVEELVMSDISKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGLFGYGFLVSNVDKINAADIDGVKADEKNIADGKYDLARSLFIYINAKKNPKEAF
                     EFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            18737..19651
                     /gene="pstC"
                     /locus_tag="ACJE1S_000843"
     CDS             18737..19651
                     /gene="pstC"
                     /locus_tag="ACJE1S_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HGG0806406.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            19648..20736
                     /gene="pstA"
                     /locus_tag="ACJE1S_000844"
     CDS             19648..20736
                     /gene="pstA"
                     /locus_tag="ACJE1S_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HGG0806407.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQITEKSWLLANSEVDQYMKQKYNRLSE
                     KQRTLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVVGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAGAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            20733..21473
                     /gene="pstB"
                     /locus_tag="ACJE1S_000845"
     CDS             20733..21473
                     /gene="pstB"
                     /locus_tag="ACJE1S_000845"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HGG0806408.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKNKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            21536..>22269
                     /locus_tag="ACJE1S_000846"
     CDS             21536..>22269
                     /locus_tag="ACJE1S_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0806409.1"
                     /translation="MIINQIYSIDSCDDVELNIKRGSKLEFRLTYDDSKEIEAIVCII
                     PGGAEDMNNYIYVDDYLARNYNVAIININYHCIGNRPHLGSSFYLDDIDKIILDTSLK
                     TINLNHINVFDINSYENLNNAFIRIDQEIQKLKLNQKLNQNYKLRTHVSFLPSKNEYQ
                     NFGIMQAMDILNAIFYIKENSPFKLMGGGIRTILFGNSYGGYLANLCAKIAPWSIDFI
                     LDNSSFVNLFGNIFRLIGFGKEIDFT"
BASE COUNT         7694 a         3185 c         4055 g         7335 t
ORIGIN      
        1 atgaaatttt agaaattact caaagtgctg ataaagatac cattaaaaaa gcttatagaa
       61 aaatggcttt aaaataccac cctgatagaa atcaaggaga taaagaagct gaagataaat
      121 tcaagcttgt aaatgaagct tatgaagttt taagcaatga agaaaaacgc gctatttatg
      181 atagatatgg caaagatgct ttaaaaggcg gtggctttgg atcaggggga gcaggttttg
      241 gtggctttga agatttgggt gatatttttt ctagtttttt tggtggcggt tttggtggag
      301 catcgcaacg ccgcaaaaaa tcaagcgatg aaaaatttca agccgaactt gtagtaaatt
      361 taaaacttag ttttaaagaa gcggtatttg gctgtaaaaa aaatatagat tttacttaca
      421 aatcttcatg taaaacttgt agcggaacag gagctaagga tggaaaactt caaacttgtc
      481 caaaatgtaa gggcagggga caagtaggaa tttctcaagg ctttatcact tttgcgcaaa
      541 cttgtcctga ttgtaagggg agcggagaaa gcgcaagtga gaaatgtaaa gattgtaagg
      601 gtaagggtta tgaagagctt aaggatagtg tagaagtaaa tatccctgaa ggtatagata
      661 atgggatgaa tttaagagtc gcagctaaag gcaatcttag caaaagtggc gatagggggg
      721 atttgtatgt taaagttatc gttgaagagg atgatacttt tataagagat gatgaggata
      781 tttatataga atttccggta ttttttaccc aagctatatt aggacaaagt ataaaggtgc
      841 ctactatacg aggggaagcg actttaaatt tgccaaaggg tgcaaaggat ggacaaagat
      901 ttgtgcttga aagagagggt gtaaaagatg tgcatagctc tcgcataggc aatcaaatcg
      961 tgcaaattgc tatcaaattt ccaaattcac tcaatgatga gcaaaaagaa cttttagaaa
     1021 aactcagcga aagttttggg ataaaagatg gtatgcatca tgaacaaaaa ggattgtttg
     1081 aaaaaataac ccattggttt aaatcttaat tttcttcaag ctttttagct tgggaaaatt
     1141 tctttgaatt taagttagaa agatatttta tataaattta agttttaaaa ataaggcata
     1201 aaaaaaggtg gagtaaaact ccaccttgaa cttagacttt agagcttctt agaatttgta
     1261 aagagcttga agtcttacag catcacgatg agtgctatct gtatctttat caacatttac
     1321 ataagaatag aatgctgaga agttaagttt tggagagtat ttataatcta ctcttgcaac
     1381 tgcttcaagt ttatctccac cattgccagc ttctgtttta gttccaccgt atacgaagtc
     1441 agcacctaaa cgaactgttt cgttgaaagt ataacctgct ttaacaaatc cgaagatatt
     1501 tctaccagtg tcaccattta gttttgaacc ttttgtatag aaaatttcct cacctgcaag
     1561 taaagagcca agattacctt gatcttcgat tacagttacg gtagctttat cttttttacc
     1621 gtagtataaa ccaccaagag ttgcatccca accatttact tcaatactac cgtttaaagc
     1681 aaagaagtta ccatttccat ttccaagatc tttgtgctca ttatcaaggc tgtttcctaa
     1741 ataagcacct tcaagagtcc aatttacccc atcaaagata gtagtgttat aagctgcatc
     1801 taaggcatag aagaaagcat tgtcagtcat ataagctaac cataattgtg ggtttaattg
     1861 accattaaat acttcgtaag aaccgatagc tgcagcacca taaagatttt cactgaaatt
     1921 taaaactttg cctaattctc caccttgctc atcgctgtta tagctatcta cagcaaaagc
     1981 agctagagtt aaaccatcaa tgctgttgtt tactacttta acacctgttc ctactaaacc
     2041 atcgattgca ttatcagtcc agatggtgtt aagttgttgt ttacctagga ttacacttgt
     2101 agctacattt tcatctgtgt aagttaagta taattggcga acattcaatg ttgatgaatt
     2161 atctgctgca tatgcacgag ttgtagaacc attatttgtt ccataaccac catcttttgc
     2221 attgtagtca agttgaacga aagctttgaa gttgtctgct atagcaccgc tgaagttaag
     2281 ttgagctctg tatttgtgat cttgttttcc agagatattg ccaccttcat ttggagctac
     2341 accattgata tcgctccact cattgcctgt ttcgtatcta tatcttaaaa cacctgatac
     2401 atcgatatct ttgatcgctt cttcaagtgg agtagcattc gccactgaga aagcacctgc
     2461 agcaagagct gctactaaac taagtttaac tagtttcatg agaattctcc ttgtttaaaa
     2521 ttaaataaaa cgctgtaatt gtagcacata aatctatagt tttttcttaa aaagcactta
     2581 aaataataaa aattctaaat ttttagagtg gaaaatataa taaaaatagg cctagcttgg
     2641 tatttactag gcctatatta aggagttttt cttatgaatg ttttcggttc atttggaagt
     2701 ataagtctta aaagtaaatg agaagtaatc aaacataaaa gatgaaaatt taattctctt
     2761 atgtttatat ttataaaaaa ttaattcgca attccataaa tgaaaatcgc aaaaatgatc
     2821 aaaggtatga tgaatttaat ataataaaac caaattttaa atcccatgct ttttaattta
     2881 ccttcattgc taagctcttt tatgctttgc tctttgccaa gaacccagcc cacataaatg
     2941 cagcaaaaaa aggctgttaa aacaaataaa atatttccac tgataaaatc aaaactatca
     3001 aaaatatttt tccctttgat aagagtgata tctctccaag gtccataagt gagtatacaa
     3061 ggaatgtttc ctagtatgaa aatcgaacct agggttaaat taatagctgt ttttttagaa
     3121 agtttgaatt tttcttctaa aacactgatg ataacttggt atataggcaa gctcgttgtt
     3181 aatgctgcga tgagtaaaag tataaaaaat aaaatgcaaa tgatagtccc aaagtggata
     3241 tgagaaaatg caataggcag ggtttgaaac actaaagaag gtcctttatc gggctcaagt
     3301 cctgctgcaa aaagtgcagg aaaaatcata aagcctgcta gcacagcaat aagagtgttt
     3361 aaaactcctg tataaatggc ggtttttgcc atgttttcat ttttgctaag atgagatgaa
     3421 agggtgatca tcacgccaaa acccagagaa agtgcaaaaa agacttgtcc tagaacatcg
     3481 atgagtagtt ttggggatag aattttgtca aaatcaggcg taagataaaa ttttacacca
     3541 tttatagcac cttcaaggct taagttgcgt cctacaacaa gtataagaca aatgaaaagc
     3601 aaaggcatta aaaatttaac tgatttttct ataccgtcta taatgccacg ccttaaaatg
     3661 atataattaa taagaacaaa aagtgtagta aaaattccta cgcctaaagg attgaaagaa
     3721 attttttcat taaaaaaata ctcggtaaaa tctttggtta cagtgtgaga aagatcgaaa
     3781 tttcctatga ttaactcaaa aacatagaca aaaacccaac cacctaaaac catataataa
     3841 gccatgatac caaaactacc caaaagcccc atatagccta caaatttcca tttgccctta
     3901 aaagtgtcga cgctgtttgt catggatttt ctaccgatga cattttcagc taagataaca
     3961 ggaatgccaa tgagtatcat tgctacgcaa aatactaaaa cataagcacc acccccattt
     4021 tctcctacaa gatagggaaa acgccaagtc gcaccaaaac ctatggttgc tcctgcgacg
     4081 gttaaaatat aagtaagagt gctactccat gtttgtcttt gcatgcttat cctttcaaaa
     4141 aaattaaatt gtagcctaag aatactttaa aaaattataa attttgcata tagtctaaat
     4201 tataggtatt ttttaagcgt ttttgtatag tttcgtgcca attttgtgaa atcagtgtat
     4261 cgagtttgct taatttttca agcaagcttg gattttgttt gagtgcttga tgggggttgt
     4321 aaaataaatg attgagctct aggacgctta aatttatagg atttttttct ataagctcga
     4381 ttttagaatg agcatggatt tttttaccct ctaaaacacg ataataccac ccacttaatc
     4441 ctgttttaaa aatttcttgt gtgaaatttg gattttgatg gacttttgaa attttaacac
     4501 aaggtttgcg cggttcgctt acttgcaaaa tagcattttc aaatcggtgt atatcgccta
     4561 tacaaacatt ttgttcgtgt aaattttcaa gggttaaatt ttctcccatc ataccgcatg
     4621 caagtttttt tccaagaaaa ttttcccaaa gggcgtagtt atgataagaa tttgcaaata
     4681 aggctttatt ttttccgccg tgatgttttg tatcggctat gttatcgtta agaataccta
     4741 aagaattgat atctacttct tctaaataaa gatcttttat aaaagcactt ttaaagcctt
     4801 tataatcttt gatatgtcct atctgtaagc ttttgagttt catttttcta acttttgtaa
     4861 caaatcatgt gcactgataa aacccgtgat tctaagattt tctttgcctt tttcaaaaaa
     4921 tatcaaaacc ggtgggccaa aaacaccaaa ttctttcata atttctaagt ctttgtcgct
     4981 gttttgagtc agatcaattt tgattaaatg aaaatttttg agtttttctt gaattctttc
     5041 gtcgctaaaa gtaagctcat ctaagagttt gcaattttca caccaagatg ctgtaaagtt
     5101 aaacatgata gggcgggtgc tagttttaat ctctttttga agagtgttaa gatcgtttat
     5161 aaaattataa tttaattttg aagaatttaa gggcatgttt tggtttaaat ttaaaggatt
     5221 taagaaattt tttgcgccaa agattccgcc taaaaatata cttaaagaat aagccaaaac
     5281 caaaatcaat aagctttttt taatcttagc tactgcatta aaagcttgtt caaaaattcc
     5341 cataaataca ctaaaaaata cgcccaaaat tccaaaagcg atcaaaatat atcttgtttc
     5401 aatgatacga gaaagtatcc aaatagccat agctagcata acaaagccaa agaaaatttt
     5461 tactttttgc atccaagctc ccgcctttaa aaagccaaga cctaaaccaa tgaaaagcaa
     5521 aggaattccc atgccaaagc tcatgataaa aagggcacta gctcctaaaa gtgcatcgcc
     5581 tgtgttggct atgtagatca aagcaccggt taaaggagca gctacacaag gacctacgat
     5641 aagagccgat aaaaagccca tgatggctat acctagtact cctttgcctt tttcactttt
     5701 tttgtggaga aaattttgaa attttaaagg cagttcaaag cgaaagcttt caaacattgc
     5761 caaagcaagc aatacaaaaa ttagcgcaaa aaagatcaaa acactaggtt tttgcaaaag
     5821 tccttgaacg cttgctccta aaaaactcgc tataactccg acaatagcat aggctaaaga
     5881 cataaaaaat acataaataa aagataaaaa gaagctgtgc tttttagaaa attttgtttc
     5941 gcttttagct acgatgagtg aagataatat aggaatcatc ggcaaaatgc aaggagtaag
     6001 tgaaagtaaa agtccatagc ctaaaaagct tagtaagatc caaaaaagat tatctgtggc
     6061 taagaaattt gcaatcatac tttcttcgga ttttgcactc aaggtttttt gcttttcttt
     6121 ataaggggct gaaatttcaa atttattatc tttgtgtttt agatcaaaat accaagtttg
     6181 aggattgtag cataagcctt gttcggagca gccttggaat tggagtttga tttgattgtt
     6241 ttgattttgt gcaaaacgct caagtagtag gttaggcaag gctagattta aatcttgata
     6301 atacactttt tcattgagtc tttgggtgct aggtgggaga ttgattaaag agctgatatc
     6361 gttttgattg agatagagtt taagttgatt agaataaaga taaatatctt ttcctaattt
     6421 gatatcgatt gatacagcgc tatcataaga actcgatttt acttcaaagg cttcatttaa
     6481 agataaaaca gaggcaaata aaaaataaca agtgaataaa agtgtaaaaa taaaacgcat
     6541 tgtcatccta ggcttaaatg taaaatttgt gattttaatg tgaattatag tttgttatgg
     6601 taaatttgct ttaaatattt tataaaggtt gctcatgcaa gaaaaagttc cagcaaagat
     6661 tcaagaggaa acaaaaaagg atgaaattta tgtttctgtt aaaaagaaaa aaagcactat
     6721 agaatatgaa aaagatttaa aaaatctaca aatcgagctt ttgaaatttc aaaattatgt
     6781 aaaagcaaag ggtttaaaag tgcttatact tatagaagga cgcgatgcag caggcaaggg
     6841 cggtgcgata aagcgtttga tagagtattt aaatcctagg ggatgtcgtg tggtagctct
     6901 tgaaaaacct agcgatgttg aaaaaacgca gtggtatttt caacgctatg tgacgcattt
     6961 gccttctgca ggtgagattg tgatctttga tagatcttgg tataaccgcg caggagtaga
     7021 gcctgtaatg ggtttttgta ctccacagca acataaagac tttttaagag aggtgccttt
     7081 gtttgaaaat atgatatcaa atagcaattt gatgtttttt aaattttatt tttctgtttc
     7141 taaagaggag caaaaaaaac gctttgaaaa acgccgcatt gatcctttaa aacaatacaa
     7201 actttctcct gtggatcaaa aatctcaaga attatgggat aaatacacct tagcaaagta
     7261 ttccatgctt ttagcatcca ataccccaac ctgtccatgg actatcattt cttcagatga
     7321 taagaaaaaa gcaaggctta atttattgcg ttttatattg tcaaaagtgg attatgcgga
     7381 taaaaaaatt ggagattttt caaagattga tcaagattta gtaagaagtg gcgaagaaga
     7441 aattcgtaaa atggaagcaa atttggaaaa aatagacaat aaaaaagcag atgaaaaaat
     7501 aaaggatttg gactaaaact atgttagaac gcgttaaaaa tttaagtgat aaatactatg
     7561 aaaaaattgt caatttaaga catcaaattc acatgcaccc tgaacttgaa tttgaagagg
     7621 aaaatacagc aagattggta tgtgaaattt tagatgaata tggcattaag tatgagaaaa
     7681 atatagctaa aacaggaatt ttagcaagca tagaaggaag aaaaccaagc actaaaaaag
     7741 ctcaatgcgt gcttttaaga gcggatatgg atgctttgcc tgtgcaagag gaaacaaatc
     7801 ttagttatgc ttcaaaaatc aatggaaaaa tgcatgcatg tggtcacgat ggacacacag
     7861 cagggctttt aggagcggtt ttgatcttaa atgaattaag agatgaattt agtggaacga
     7921 ttaaatttat gtttcagcct gctgaagaag gaagcggggg tgctaagcct atgatagaag
     7981 caggcatact tgaaaatcct catgtggatg cagtttttgg atgccatttg tgggggcctt
     8041 tgcttgaaaa tactgctcaa attgtaagcg gtgagatgat ggcaggggtt gatgtttttg
     8101 atcttgaatt tatagggaaa ggcggacacg gagcgcaccc tcatacgact atcgatccta
     8161 tagtaatggc aagcaaattt gtcagtgatg tacaatgtat catttcaagg cgtttaagac
     8221 ctgtggatgc aggggttatc accataggga aatttcatgc ggggacaacc tttaatgtga
     8281 tcccacaaaa tgctatcttg caaggaacgg tgcgtttttt aagtgatgaa aatcaaaaac
     8341 ttttacaaag ttctatagaa aatacagcta gagctgttgc tttagaattt gggggtgatt
     8401 ttaagcttga ttataaaaga gaatatcctc ctttaatcaa tgatgaaaat gctgcaaaaa
     8461 tagctagaaa agcttttggc aaggtattgg gcgagcaaaa tatcattagc gtagctaagc
     8521 ctgatatggg agctgaggat tttgcttttt taacgcgtga aagaatgggt gcttatgttt
     8581 ttgtgggtat ttcaaaggat ttgaaaaatc ctaccttaca ccatagctct actttttgct
     8641 gggaagatga aaatttaaaa gtcttaatgc aaggcgatag tatgatggct ttagaatttt
     8701 taaattctta aaaatatgaa tttaaaaatt cacaaaaaat tcactttgta tagatacaat
     8761 tgcgagattt attttttaat ttaaggttta gaatgaaaaa tagggtcgtt ttgattgtgg
     8821 tgattttagc actttttgga gtgggcgctt attttatatt ttttaatgat aatgaaaaaa
     8881 tcacctatct tacccaaaag gttaaaaaaa tagatatttc tcaaactata gaagcagtgg
     8941 ggaaggttta tgctaaagat caagttgatg tgggtgctca agtaagcggg caaatcatta
     9001 agctttatgt ggatgtgggt tcgcatgtaa aacagggtga tttgatcgcg caaattgata
     9061 aagataaaca gcaaaatgat ttagatatca caaaggcgca gcttgaaagt gctaaggcta
     9121 atctagaaag taaaaaagtc gcccttgaaa tcgcaagtaa acaataccaa agagaacaaa
     9181 agctttatgc tgctaaggca agttctcttg aaaatttaga aactcaaaaa aataattttt
     9241 acactttaaa ggcaaatgtt gcagaactta acgctcaagt agttcagctt gaaattactc
     9301 ttaaaaacgc tcaaaaagat ttaggataca caaccatcac tgcgcctatg gatggagttg
     9361 tgatcaatgt ggcagttgat gaggggcaaa ctgtcaatgc aaatcaaaat accccaacca
     9421 tagtccgcat agctaattta gatcaaatgg aagtaagaat ggagatagcc gaagcggatg
     9481 ttggtaagat aaaaatcggc acggagcttg atttttcttt gcttagtgat cctcaaaaaa
     9541 cctatcaggc aagtatagca agtatagatc ctgcagatac tcaaatcagt gattcaagta
     9601 cgagttctgg ctcttcaagt tctagctctt caagttcaag ttctaataat gcgatatatt
     9661 attatgctaa attttatgtg gcaaataaag acgatttttt gcgtattggt atgagtatac
     9721 aaaatgaaat tgttgttgca agtgctaaag atgttattgc tgtgcctact tatgcaatca
     9781 aaaatgacgc aaaagggtat tatgttgaaa ttttgcaaga tcaaaaagca gtaaaaaaat
     9841 atgttaaatt aggcattaaa gattctgtaa atactcaaat tttagagggt ttaagcgagg
     9901 gtgaattact agtagtaagt tcaagtggtg ataatgctgc tcctaagtta agattgagat
     9961 tttgatgatt ttcttaaaca atatttgtaa aaatataggc gagaatgcca ttttaaaaaa
    10021 tgtaagttta agtatagaaa agggtgaatt tgtcgctatc atcggacaaa gtgggagcgg
    10081 aaaaacttca cttttaaata tcataggcac tttagatgag ccaagtagtg ggagttatat
    10141 ttttgatgat tatgaagtaa cccagcttaa tagcgatgaa aaagcgagat taagacgcga
    10201 aaaaataggc tttatttttc aacgctacaa tcttttaaat cttctaagtg caaatgataa
    10261 tgtcgcatta cctgctgttt atgcgggtaa aaaagtacaa gaaagaaatt ttagagccca
    10321 agaactttta ggcaatttag agcttgagca taagatagaa tcaaagccca atgagctaag
    10381 tggaggacag caacagcgtg tttctatagc tagagctttg atgaatggag gagagcttat
    10441 tttagctgat gagccaacag gggctttaga tagtaaaagc ggtattatgg tgcttgaaat
    10501 tttaaaaaaa ttaaatacac aagggcatac catagtgctt gtaacacacg atccaaaaat
    10561 cgcagcacaa gctaaaagag tgatagaaat caaagacggc gagattttaa gcgatagcaa
    10621 aaaagataag attgtttatc aaggacaggt taaaagtatg ccaaaagaga aaaaaactct
    10681 taccttgctt aaaaatcaag cctttgaatg tttaaaaata gcttattctt ccatacttgc
    10741 acacaaactt cgttccattt taaccatgtt agggattatt ataggtatag cttcggttgt
    10801 gtgcgtagta gctttagggc ttggctctca agctaaggtt ttagaatcca tcgcaagact
    10861 tgggactaat accattgaaa ttcgtcctgg taagggattt ggggatttgc gttcgggtaa
    10921 gacaaggctt aattttagtg atttagaaac gcttagaagt ttagattatt tagaagcagt
    10981 agatgcacac tctaatactt caggcgtggc aacttacacg aatatttctt taagcgctag
    11041 agctgaagga gtgggagtaa ataattttgc tatagagggt ttaaaacttc aagtgggtag
    11101 aattttaaat aatgaagata tagaaactaa tgctaatgta gcggtgcttg attttaatgc
    11161 taagaaaaat cttttccctc gccaaaagag tgaagatgtt ttagggcgtg tggtgatttt
    11221 taattctcaa ccctttaaaa tcataggagt tttacaaaaa gatacagaaa agcctataga
    11281 agataatgta gtgcgccttt atatgcctta tactacgctg atgaataagc ttacaggcga
    11341 tagaaatttg cgtgaaatta tagtaaaagt aaaggatgat gtgagttcta ctttggctga
    11401 aaatgctgtc attagaattc tagaaatcaa acgcggacaa agggattttt tcacttttaa
    11461 ttctgatacc tttaagcaag ctatcacagc aaataaacgc acgactacca tacttacggc
    11521 ttcggtggcg gtgattgctt tgattgttgg gggtataggc gtgatgaata tcatgcttgt
    11581 ttcggtgagt gaaagaacaa gagaaatagg aattcgtatg gcaataggcg ctagaagaga
    11641 ggatatcatg atgcagtttt taatcgaagc ggtgatgata tgttctatgg gtgcgatttt
    11701 aggagttttg ctttctgttt ttgtgatttt tggttttaat actctaagca ctgattttcc
    11761 tatgatttta aatgcgtatt ctgtgctttt gggtttatta agttctgttt taattggggt
    11821 tatttttgga tttttccctg caagaaatgc agccaattta aatcctatta gcgccttatc
    11881 aaaggaataa aatgaaaaat ttattgagta ttttactggc atttttttta agcgcctgtg
    11941 gtgtaaaact tagcttgcct aaagagccta caatgagcga agagagcttt aaagacttaa
    12001 atatcactta tgattggtat aaggcttatg ataatgctaa attgaatgaa tttttaaatt
    12061 ttgttttgtt aaataatagc gatataaata tagctagaag cactttgctg acagctttag
    12121 caagggctga tttgatagat tatgattttt atccgacttt aagtgcaaat ttggggctta
    12181 gtggagaaaa gaatttaaat tctggagtcc aaagtaagaa atttagcaat agtcttaatt
    12241 taagctatga gcttgacatt tatggaagga taagggatag ctcaagtgcg agtgatttta
    12301 gtgcaaaggc tagtgcttat gatcttgaaa atttgaaaat cagtatgatt aatacggctt
    12361 taaatggtat ttttgaactt gcttatttta atgatgtgga taatttactt aaagagtatc
    12421 tagctaattt agaacaaatg agagagcttt atgcttataa atttgagctt ggaaaaatcg
    12481 aagaacttga tttgcttaat atagagcaaa atttattaaa ggcaaggcaa gatttattac
    12541 gcaatgagca aaatcgcaat ttacttataa aaaatttaca agatttgata ggaaagcaag
    12601 agggctttgc gtatattgat tattttaaag ctttaactct ttctgatttt aagaatttaa
    12661 atcctaattt taatattcct ttagaagctc ttgtgtatcg tcctgatgtg cgttctaagc
    12721 tcaataccct taaatccgct tttaaagact atacttcggt gcaaaaatca atctttccaa
    12781 gcatttcttt aggcggggct ttaaatggca gcgataagca atttgatgat agttttaaat
    12841 ttgaagtttt gagtggcaat ataaaaattt ccttaccttt cttagactat ggcagagtaa
    12901 agcaaaatat caaaatttcg cagtttgatt atgagagtgc gcttgttaat tacgagcaga
    12961 gtttacaaag tgctatgaat gaatttgcct taaattataa agactatcaa agcaatacta
    13021 tgctacttca aattttaaaa gatactagct ttaagcaaga gttgatcact caagcttatt
    13081 gggaaaaata taatttgggt aaaagtgaat taaaagatta tttagatgct tctaatactt
    13141 taaattccgc taagcaaagt ttgctaggag ctaggtttac tcttcttaaa accatcaatt
    13201 cttattatca aatcacagct ttaaactatg atgaaagaaa tttggaaatg ccttaatttg
    13261 tatcgcttta tctgctaaaa tatcaagtag ataaggcttt tttaattata tcgataaaat
    13321 taaaaatcaa taatgcacat atttttttaa atcatcaagc aattttttag ccattaattc
    13381 atagccttta atggttaaat gtacatcttg caaagagagt ttttgctcta tccatttatt
    13441 ttttccaccg ctatcttgca tgaattggtg catatcaaaa agaagggttt tttcttcttt
    13501 ggctacctca taaagtgctt gccttatagc aaaaaaatca ggagctaggg tgtatttttt
    13561 accttgtttt tttaccacag taggaggaga aacaagcatg ataagggcgt ttttattgta
    13621 agttttgagt gtgtgaatcc aatcttttaa attcttttta aatttgtttt tttcaaaacc
    13681 tttaaaaagt gcgtcattag aaccataagc aagtaagatt aaatcattag ataggagttt
    13741 taattcttgc tcgcttactt ttttattcca cgacatccaa agatcgcttt ttgccccatt
    13801 gatcgctatg gtatctaaat aagcattatc ctctttactg gtgataaaat atcctcctaa
    13861 ttgagcgttt ttttgtaagg cagaaatttg caaaggaaaa acaagttcgt attctttata
    13921 tgaccattta ttggctactg atcttagctc atagcttttg ttttgagcgt ctttaatgct
    13981 aaaggcattg gtgttatttg gagctttaaa gacaaaacct actttaaatt ttttcttgtc
    14041 taaattagta tcaagggtga tttttgcacc cttttcttta gccttagcta ttatcccacc
    14101 taaaggaaaa tcaatacctg cggtgtctgt atttcttgaa tttaaaattt cataatcttt
    14161 ataagaataa tcaagattta aattttgttg atatttgggt tgcaaagggt aggcaaagcc
    14221 tatggaattt gattttatca aatatcctct aataacacgc ggaaaaaaat ctgctgccgt
    14281 gtgagaatct ccataaattc taatacctat gtttttatgc tctttaagtt tttgctccaa
    14341 aagctttaag tcttttttgg aagcataatt gcttaaagca cttttgtttt tggtttggct
    14401 tagaatttca tctatggtat ggtttgtgtt atttgcgtat aaattgattg aaaatataag
    14461 aattaataat atagctttaa attgcttaat ttgcattttc ttccttgatt gttatatgtt
    14521 gaagcaagag ttttgacatc tcttttgctc cgtttgaggt aaaatgaatt ccatcgtctg
    14581 ttctcatttt tatacttttg ttgttttcat ttttaatata ggttgaaaat tcatcattaa
    14641 cgctaaaaaa tagttttgta ttgataaaaa tttgtttatt tttgagaatt tcttcgctat
    14701 aaattttgtt tagaatttgt attttttcat tgagttcatt ttttttaaca ggaggaattt
    14761 caaaccaaag aatttttgca tgatgttgtt tagctatatt gatgatttca tttactctat
    14821 aggtgtagat gtcaatccag ctatctgaac caaagcggtg ataaactcca ccttttttga
    14881 tatcccaagg atcatttgcc cctagtaaga caactagata tttaatgttg ggattttttg
    14941 caaaagcttc tttggttgct tttgcccaat caaaataaga tttgtaagaa agtcctgtat
    15001 tttgcttgct aagatcatta gcttttaaac ctagatcaat taaatcacga ttgagtgcaa
    15061 ttgcaacgcc ttgcattaaa gaatcgccta taaataaaaa ttcatcacct ttatgaactt
    15121 ctaatttggt attgtcaata aaactgacat tttcgtcttc tgtttgctgt atatcttcaa
    15181 tagtggtgtt tttatcgata aaatcattac ttgcattaag ttcatccata tcttcttgaa
    15241 ccatgatatt ttcttctata ttttgaggta gaggctcatt acttagtatt gcacggattt
    15301 gttctagttt atttttaaaa ccattggcct cttgcaaaat atcgttttta ggataaaatg
    15361 taaagtgata tttttgctcg atataagaaa aaatgctttg attcatcaca aggcaaacca
    15421 gtacaaaaac tataatcaaa ataaagaaga atttaatcat tttcatttaa aaactcgaat
    15481 aaataaaatc aggaatgcca tttggcataa aagcaaacac taaaagcaag ataaaagtga
    15541 ttacaaacgg cttgagtaaa aacggcgtaa gatttaaaat ccttacgcaa tattctctaa
    15601 aattaacaaa taaaggataa atcataaaaa gcacagcaaa gcttgcaagc atataaatat
    15661 cgttatagct aggaatttgg aagaaattat tataacaagc tttgaagtat tctaaggcat
    15721 cttctaaatt tttattataa taaaagaaaa tccaagtaaa acatacaaat tgaaaggtta
    15781 aaaatcttcc taaagctgga attttttgaa ggctgaattt gcttaaagca agtaaatgga
    15841 taaatacaat acccaagcca tgcaataaac cccaaacccc aaaagccaaa gtacttccat
    15901 gccataagcc cgaaagaata aaagcgatga gtatattagc tacagtgcga ggcattcctt
    15961 ttctgttgcc tcctaaagga atatagatat aatctcttat gaaagttgaa aggctgatgt
    16021 gccatctagc ccaaaattct ttaagatttt tagctagata aggcatatta aaattcggtg
    16081 gcaaggtaaa acctaacatt aaagcaaaag cacaaactag atctacatat ccactaaaat
    16141 cgcaatatat ttgcaccgca taagcgtaaa ttgcacttag aagttgtata aaattataag
    16201 attgtggaaa atctaaaata tttttggcat aaattcctaa gtaattagca ataagaactt
    16261 ttttcactat accaaaaata agcaaaatga tgatcaaatt tgcatgttta aattcacgtt
    16321 tttgataagc ttgttcgaaa aaaaacgcac tacgcataat cggccctgca agtagggtag
    16381 ggaaaaatga taaaaaggtt gctaaattta aaaagctttc taaatgatgt tttttgtata
    16441 catctacaag gtaagtaata gaagcaaagg tgtaaaaact aatgcctata ggcaagataa
    16501 gttcgatatt taaaaaatca agccccaaaa agcttagcac ttgatcaaga cttcctttga
    16561 tatttggaaa atatttgaaa aaacataaat ttaatattat aaaagttata caagtagcaa
    16621 aaatatatcg ttttcgacgc acaaagataa gcaaggcaaa aaaatgtata aaaaaagtgt
    16681 aaataaataa aattaaagca aaataaggat taatcagtat ataaataaga tatgaaaaag
    16741 ccaagattaa aatattttgt attttataat tatctttaaa tgcccaatat atggcaaaaa
    16801 atacaatcat taaaatacta aattctaaag aaaaataagt catacgctac ctaagatgaa
    16861 attataattt tgcctttttc aaggcaaaaa tattattttt tagacaaagc taaatttttg
    16921 atatattgat cagctagata taagccgttt ccattgtcac tgatgagttt gattttatct
    16981 actataccac ggaaaagtgc ttcttcttcg tgctgttcgc ttacatacca ttgaagaaaa
    17041 ttaaaagtag aataatcttt attgcctagc atgtgctcta caagatcgtt gattgatttt
    17101 gtaatgcttt gttcatgctc gtaagttttt tcaaaaacat caagtaaaga tttgaaattt
    17161 tgttcaggtt gcttcacttc tttaagctct acatgtgaat ctgtttcatt aagataagtt
    17221 ataagttttc ttgcgtgttc gctttcttcg cttgcgtgtt gaaaaagaaa gagcccagct
    17281 ccatcaagac tattttcata gcaccaagaa ctcatactta gatataaatt agctgcatac
    17341 atttctttgt tgatttgctc gtttaataaa tcaactactt tttttgaaag cattctatct
    17401 ccttattttt atttttagaa tgtttttaaa atgatatatt gattttttta aaacaagcta
    17461 aatttttaaa ggattgaagt taaaatatat aaaataaaaa taaaatgttt ctaaatgaaa
    17521 ttaagcttta tattttatta cgagtataga ttttatttta aggctgaaaa tctgcaaaga
    17581 tttttaggtg ggcgtgcctt tagaggtttc aaaaggacta agtcctttgt cgcaagacgg
    17641 aatttatttc cgtcgcgaag taaaaaatgt ttccaaaatg tttccaactt tttctaaact
    17701 tccgttactt ttttaaaagt aaggagaaaa aatgaaaaaa attctagctt taagtgttgc
    17761 aagttttgct ttagcgggtg ctttaaatgc ggctgattta aaaatcgcag gttcatcaac
    17821 cgtgtatcca tttacttctt ttgtagctga agagtatgca gcgattcaca atacaaaaac
    17881 tcctattgta gagagtttag gaacaggggg tggatttaaa gtattttgcg agggcataac
    17941 tgacatttct aatgcttcaa gagcgatgaa atttagcgaa tttgaaactt gcaaaaaagc
    18001 gggagttact gatatagtag gaattatggt aggttatgat ggtatagttt tagcgcaaaa
    18061 taaagccaac gcacctttaa atatcactaa aaaagaactt ttcttagcat tagcaaaaga
    18121 aattccacaa aatggaaaac ttataccaaa tccttataca aactggaatc aaatcaataa
    18181 aaatttacca aatcgtaaaa ttagtgttta tggtcctcca tcaagctcag gcacaagaga
    18241 tactgtagaa gaacttgtaa tgagtgatat ttctaaaaaa attcctgaat acaaaggcga
    18301 gtataaaacc atacgccaag atggagctta tattccaagt ggtgaaaatg ataatctaat
    18361 cgtttcaaaa cttactatcg ataaagatgc ttttgggctt tttggttatg gatttttagt
    18421 aagcaatgtg gataaaatca atgcagcaga tattgatggt gtaaaagcag atgaaaaaaa
    18481 tattgctgat ggaaaatacg atcttgcaag aagtttattt atctatatca atgcaaagaa
    18541 aaatcctaaa gaagcctttg aatttgcaaa aatttatatg agtgatgatt tggcaaaaag
    18601 tggtggagag cttgaaaaaa taggacttgt tcctttaagt gatgataaat taaaagcttc
    18661 tcaaaaacac gtagaagata gaaaaatttt aaatgatgag cttgtaaaag ctggaaaagt
    18721 tttttaagga aaaactttgt taaaagaaaa aataatcaaa tttgcacttt ttttatgtgc
    18781 ttttgtaagc gtgatagtaa gttttgctat catgcttaca attttaattg aagctttaaa
    18841 attctttcaa aaagaaagcg ttgttacctt tttattctca agtcagtggg cagctgatgc
    18901 agcttttatg aatgcagatg gcacgagtaa acaaggtgtt tttggggcgc tatcgctttt
    18961 ttggggaact ttttatattt cattgattgc tatgctaacg gctttacctt taggggttat
    19021 gtgtgctata tatttaggtg tttttgctgg caaaaaatct aaaaattact taaaacctat
    19081 tttagaaatc attgcaggga ttcctactgt tgtttttgga ttttttgcgg ctatagttgt
    19141 agcgcctttt atagtgtggt ttttttcttt atttggcata caagcaagct ttcaaagtgc
    19201 tttaggtgca ggttttatca tggggatcat gatagtacct atagtggctt ctttatctca
    19261 agattgcatt gaagcagtaa gcgagaaaag gattaatggc gcttatgctt taggtatgac
    19321 aaaaaaagaa gtggtttttg ccgtgatttt acctgaggct attcctggta tagttgcagc
    19381 ttgtctttta ggactttcaa gagccttagg cgaaactatg atagtggtga tggcagcttc
    19441 tttgcgtcca aatttaactt taaatttttt agaagatatg acaacggtaa cggtaaaaat
    19501 cgtagaagct ttaagtggag atcaagcttt tgatagttct ttggctttaa gtgctttttc
    19561 tttaggtttg gtgctttttg tcatcacttt aatcatcaat atgtttagcg tttatcttat
    19621 caatcgcttt cacaaaagga aaaatttatg aaaaaacttt ttaaaaaaag acaaaaagct
    19681 tcaaagtctt ttaaaagact ttgtaaaatg gggctttata ttaatttaat ttttctttgt
    19741 atctttttag gaagtgtggc ttatcttgga tttcctgctt ttaagcaaac ctatattttt
    19801 gtagaggcta atagaaattc tcctgcttat gatcttttat ctcgcgcaga acaaagaaaa
    19861 ataagaacag gacaaatcac tgaaaaatct tggcttttgg caaattcaga agtagatcaa
    19921 tatatgaagc aaaaatataa tcgccttagt gaaaaacaaa gaactttagt cgatgatctt
    19981 gtgcaaaaag gcgagataga gcttaaattt aatagcaatt tctttttaaa tggagactca
    20041 aaatctcctg aaaattcagg aattttatct tcagttgtag ggactttgct tgttatgctt
    20101 gtttgtatgg ttgtgagtgt tcctataggc gttgcagcgg caatttactt agaagaattt
    20161 gcaccacaaa atatccttac gcattttata gaagtgtgta ttaacaacct tgcaagtatt
    20221 cctagtatct tgtttggact tttaggactt ggagtgttta tcaacctttt tggaatgcct
    20281 cgttcaagtg ctttagtggg tgggcttact ttggcgatca tgagtttgcc tattatcatt
    20341 gtttcaacca aagcggcctt aaaaagtgtg gatatcaata tgaaaaatgc tgcttatgcc
    20401 ttaggtatga caaaggttca aatggtaaaa ggcattatgc tacctttagc tatgcctatg
    20461 attttaacag gttctatttt gactttagca ggggctatag gcgagactgc acctttgatg
    20521 attatcggta tgatagcatt tatccctgat gtagctagtt cgatttttga tccaactagc
    20581 gttttacctg ctcaaattta ctcatggtcg gctatgccag agcgtgcatt tttagaaaga
    20641 acagcagcgg gtattattgt gcttttagga cttttagttg tgttaaatct tagtgcaata
    20701 ttattaagaa aatattttca aggaaaatta aagtgatagc aaaaacaaca aatttaaatt
    20761 tattttatgg aaaaaaacaa gctttatttg atatcaatat gcaaatagag caaaacaaaa
    20821 ttaccgcact catcggtgct tctggatgtg gtaaatctac ttttttgcgt tgttttaaca
    20881 gaatgaatga taaaatcgca aaaatcgatg gtttggtgga aattgaagga aaagatgtta
    20941 aaaatcaaga tgtagtagct ttgcgtaaaa atgtaggcat ggtttttcaa caacctaatg
    21001 tttttgtaaa aagcatttat gaaaacatct cttatgcacc aaaacttcat ggtatgatta
    21061 aaaacaaaga tgaagaagaa gctttggtgg tggattgctt gcaaaaagtg gggctttttg
    21121 aagaggttaa aaataaatta aagcaaaatg ccctagctct ttcaggcgga caacaacaac
    21181 gcctttgtat cgcaagagct ttagcgatca aacctaaact tttgctttta gatgagccaa
    21241 cttctgcact tgatcctata agttcaggcg tgattgaaga gcttttgaaa gaattaagcc
    21301 ataatctttc tatgatcatg gttacgcata atatgcaaca aggcaaacgc gtagctgatt
    21361 atacagcatt ttttcatcta ggtgagctta tagaatttgg agaaagcaag gaattttttg
    21421 aaaatccaaa acaagaaaaa accaaagctt atttaagtgg tgcttttgga taagatttat
    21481 tttttggaaa tttgatgata taattaatta aaaatttcca aaaaaaaggt ttaatatgat
    21541 tataaaccaa atttattcta tagattcttg tgatgatgta gaattaaata tcaaaagggg
    21601 aagtaaatta gaatttagat tgacttatga tgatagtaaa gaaatagaag ctattgtttg
    21661 tattattcca ggcggtgctg aagatatgaa taactatatt tatgtcgatg attacttggc
    21721 tagaaattat aatgttgcta ttattaatat taactatcat tgcataggaa atagacctca
    21781 tttgggttct agtttttatt tagatgatat agataaaatt attttggata ctagcttaaa
    21841 aactatcaat ttaaaccata taaatgtttt tgatataaat tcttatgaaa atctaaataa
    21901 tgcttttata agaatagatc aagaaattca aaaattaaaa ttaaatcaaa aactaaatca
    21961 aaactataaa ctaagaacgc atgtaagctt tttaccatct aaaaatgaat atcaaaattt
    22021 tggcataatg caagctatgg atattttaaa tgctattttt tatataaaag aaaattctcc
    22081 atttaaacta atgggggggg gtattagaac gattttgttt ggaaattcat atggcggata
    22141 tttagcaaat ttatgtgcaa aaatagctcc ttggagtatt gattttatat tagataattc
    22201 ttcttttgtt aatttgtttg gaaatatttt tagacttata ggttttggaa aagaaatcga
    22261 ttttactag
//
LOCUS       DBBXOW010000023        21717 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.024, whole genome shotgun sequence.
ACCESSION   DBBXOW010000023 DBBXOW010000000
VERSION     DBBXOW010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21717
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.024"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(58..1176)
                     /gene="truD"
                     /locus_tag="ACJE1S_000847"
     CDS             complement(58..1176)
                     /gene="truD"
                     /locus_tag="ACJE1S_000847"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HGG0806410.1"
                     /translation="MNLEEENTIFKPLYSLKHSSINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLSTNEALRILSELSGVKMRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLANFSHPKLKILETFIHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALINLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     YFANDFTEKELAQIYSISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     ERFKARDISAMGLLIGAKAYEASQGLALNLENEIFKDALEFKAKMQGSRRFMWSYLED
                     VKWRYDEQKAHFCMEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(1145..1966)
                     /locus_tag="ACJE1S_000848"
     CDS             complement(1145..1966)
                     /locus_tag="ACJE1S_000848"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HGG0806411.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDKWCLSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAIVMNAKPKYALLGLALPNSLGEDEIKALQKGFLKTAKKFNI
                     KIIGGDTISNDKIDISITIISKVRNKAIFRKGLKKGHLLAYTGVLGKSLRGLEILQNG
                     GTLNSNHVFIKPKLRPDFFYEIAPFISCAMDISDGLSKDLSRLLAQNKCGISWFKKLD
                     DYTLYSGEEYEILFAFDEKERQNIKTIAKKHGVKLNIFGKAVKGKYEFRGREHHF"
     gene            2048..3121
                     /locus_tag="ACJE1S_000849"
     CDS             2048..3121
                     /locus_tag="ACJE1S_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HGG0806412.1"
                     /translation="MKNLELRIFRFDKQKDYEAYYKPYVYNNYENFATLYDLLLQVQN
                     DDIYFDFEKNDKSYIVVNKEFLPLNTPLDILVKKYDFNLIIEPLSTKRSVKDLIINKD
                     DFLEKFKYLAPFASEEDKKLYEKYDYLYYSSEILDFLPEYMGDAVFYLASKMIEKYPD
                     KKIKILKTICDTQKGIFYHLTSKNEDLENTIKNLQKEIIDLKLINEAALEFDLPKINA
                     FDNEIKELGEIKYDFNDFNIACYGFKIKDDIKSKIKAHFISYENSDKNNGFSLLQLNP
                     ELSYKMAANIILDAYDSGADFMVVNQAKDFYMFDTCSKKLMQSSGREFKDFYVLSYFE
                     FLSLIQGIKNPSLQNHDLKVSLI"
     gene            3118..3501
                     /locus_tag="ACJE1S_000850"
     CDS             3118..3501
                     /locus_tag="ACJE1S_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806413.1"
                     /translation="MKISLECKDLIIEKALELFLKEHLVMKKDCDFIISDEKISTQKP
                     LFIIAKNSPFLSLPFSKEALMNSLNEFDSALKATAQKLADERRRVLEARIDEIASEFK
                     RDYQSKIDLAISELKDKLVKALMYE"
     gene            3494..4183
                     /locus_tag="ACJE1S_000851"
     CDS             3494..4183
                     /locus_tag="ACJE1S_000851"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HGG0806414.1"
                     /translation="MNNEFISVKDFLQGKKNIHFNDSTQPNKKEKTKKTLPKLYTSIE
                     SGIYKGKKLLLPSLQTTRSTKSIVKKCVFDVLRSDLRNKIFIEAFGGSALMAAEALSN
                     YALKAYAIELDLNAYKIALENAKNIDTNLKVIHANTFEILPKLIEDSKEDIILYLDPP
                     FDIREGFSGIYEKIYNFLEKLKLDALFCIILEHNSKIKTPDNIANFTKIKEKKFGSTS
                     LSFYQKNILEE"
     gene            4246..5292
                     /locus_tag="ACJE1S_000852"
     CDS             4246..5292
                     /locus_tag="ACJE1S_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HGG0806415.1"
                     /translation="MRVLIFFLLLMTSVFATQIKDIANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTARPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQDSDLTLSLKVADFKTASDIERILNTIFEEDVARAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYTPQSKVIIDERTGTVIAGVDIEVEPVLITHKDITIKIDP
                     NNNAAAAQNEIDMKDGGFVDPNSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            5292..5633
                     /locus_tag="ACJE1S_000853"
     CDS             5292..5633
                     /locus_tag="ACJE1S_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806416.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            5696..5893
                     /gene="flgM"
                     /locus_tag="ACJE1S_000854"
     CDS             5696..5893
                     /gene="flgM"
                     /locus_tag="ACJE1S_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HGG0806417.1"
                     /translation="MINPIQQSYVANTALNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            5936..6370
                     /locus_tag="ACJE1S_000855"
     CDS             5936..6370
                     /locus_tag="ACJE1S_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HGG0806418.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            6380..8206
                     /gene="flgK"
                     /locus_tag="ACJE1S_000856"
     CDS             6380..8206
                     /gene="flgK"
                     /locus_tag="ACJE1S_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HGG0806419.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTTVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGVNFHPLKLDYDDKNKAYSIYYET
                     PDEKVRDLTAKINGGQLGAQLDLRGRNYSKSEGKYSDGIIQGYMDSLNTFAKTMINET
                     NNLYASSAKSSVTSDYLPGLTEDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITVD
                     VNTTMEDIMRQITANTDDNGNNNANDDVDDHINASFSYDAKTGDSLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTNASDMKVKDSILNDPSTVRASLNGVDSGNDMANKIIQ
                     LQYDKVNFYNEDGTIDNLTMEEYYRKLTGKIGSDGENNNVVNASNQTLYNSVYSEYQS
                     KSGVNTNEELAALIQWQSSYGAAAKIVTTVDQMLDTLLGLKS"
     gene            8223..8987
                     /locus_tag="ACJE1S_000857"
     CDS             8223..8987
                     /locus_tag="ACJE1S_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HGG0806420.1"
                     /translation="MKNFTPLKNKLDSLVEEKNTNKALFESPDPLQVAKFHNDEFIAL
                     LCALFAYGNAKNIVNFLKKLDFSLLDLSQKQIQKELKNLKYRFQNEKDIQEIFLTFAR
                     LKNEISLHELFSTAYQKRENTTDAILAFLQKIKTLNSYSSYGYDFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHTHKISLTLGLLKRKIYDYKSV
                     LELTHNLKRLDANDPIKYDFALYRLGQNKELSKLKE"
     gene            8990..9754
                     /locus_tag="ACJE1S_000858"
     CDS             8990..9754
                     /locus_tag="ACJE1S_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HGG0806421.1"
                     /translation="MGFEHLDTIYYFVLFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAYGIFFTALGAAIGSYSVLFVKDEH
                     LKLIILIFLTLTFLYTALRPSLGKHESEAKIKNIKFFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMKKASINTKILNFTSNVVALFIFLWRYELLWIVGLLMGVGQILGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(9751..10926)
                     /locus_tag="ACJE1S_000859"
     CDS             complement(9751..10926)
                     /locus_tag="ACJE1S_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HGG0806422.1"
                     /translation="MKLYELEIKGKTKQTKHLRAKNLNEAQAKAIAKKWEILNIKEIQ
                     KASFKRLDDARFILFFQELSLLCEVGISIKDALKELDKIYSHKMIAKLCDNLNLGQNL
                     SLAFENANFGLTHAELALIKTSQNTGKLSEIFMQISRLRQNNVENEQRVKKALRYPLI
                     VFLSVCAAFVLLMLFVVPNFKDLFEDLNLALPFITELIIYIYNFLDKYILLVFCLIAL
                     ILFLTLFLYRKYYFFSYFCDSLLLKLPLLSKFIIYQQNYSFFMIFSLLLKSGISLLEA
                     FKLATLALNNKKVLLYYQEIRTFMDSGLEISHAFKKVDLFDPLVFSMLSIAMKSSKLE
                     FLSEEIAKYYKNKSENLMDKFLSFLEPIMTLWVAILVLFLALGIFLPIWELSSGVNF"
     gene            complement(10913..12475)
                     /locus_tag="ACJE1S_000860"
     CDS             complement(10913..12475)
                     /locus_tag="ACJE1S_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HGG0806423.1"
                     /translation="MIERFLFEDYINGKITLEQIDREHKIDSEIFLKALASDKNISYS
                     TLEELDLSLGEKFPCSFLFKFKILPILSKENTLHIASSKPCSLELLDEIRIFYEVKNI
                     EVLIASEFKIMKFLYKLQVREKLKNLSTNLRLEWKENRSQDEQSCISQIFDFILDEIL
                     EFNPSDIHIEARENDTLIRFRVDGILREFACLEKDIYEALVFHIKFLSQLNVAESRKA
                     QDGNFELKIKENRYDFRISSLPLQNGESIVIRILKHNEEILDLENLNLGEKNLTILKK
                     ALYNPYGMILLTGPTGSGKSTSLYACLNELKSIEKKIISVEDPIEYKMPLIQQILLNP
                     KAGLEFNNALRAILRQDPDIIMVGEIRDEESLDIAIKASLTGHLLLSTLHTNNAISTI
                     DRLIDMSAKPYLIASALRLVIAQRLVRKLCPKCKQKSTKVYEIKGDFFEAKGCEYCHH
                     SGYQGRELISECLYIDEEIAQVIREGGYKNKILELAKVKGFQSMFEQGLQKAKEGITS
                     IDELLRVLNEAL"
     gene            complement(12468..13064)
                     /locus_tag="ACJE1S_000861"
     CDS             complement(12468..13064)
                     /locus_tag="ACJE1S_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDC27 family protein"
                     /protein_id="HGG0806424.1"
                     /translation="MNIEERVRELEDKYKRYLLKKYFKFLFIFAILIACMLISFFMVQ
                     DFYKQKALALEALEYKKTLNWQITQAQIANEKNKILQERLSKDESKDELEEELKTQID
                     IYSKILNISDLKRSFYQNPSYQKAMNLATQYYENKDYEKSIFWSLKANDIDRKNSDSW
                     VLFAKAKQALGKDEEAKQALDTYVSYYGLIEFDKEIDD"
     gene            complement(13061..13657)
                     /locus_tag="ACJE1S_000862"
     CDS             complement(13061..13657)
                     /locus_tag="ACJE1S_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG0806425.1"
                     /translation="MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLAL
                     YHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGMYSPNVLELIRIYSDEMSFVLSS
                     HKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
                     RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK"
     gene            complement(13650..15068)
                     /gene="mshL"
                     /locus_tag="ACJE1S_000863"
     CDS             complement(13650..15068)
                     /gene="mshL"
                     /locus_tag="ACJE1S_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HGG0806426.1"
                     /translation="MIRLIFIKILFFTNLIYAMECQKRLFDININEDLSIEESLKELA
                     SYCSFSVVIKDTIAKEKLKAIQSSINIHQMSLDEIFKLFIEEQDLAYKFDGKILKISA
                     LQTRIFKINYITSVREGQSITKASVDSKPRQSEYYSAFEDNEDNMIKSMEKFDFWQNI
                     EKEIMILLSSSHENYDIKAPIVNPNAGLVIVTGTHSQLQRVKAYLQKLESRLKKQVII
                     DVSILAVNLNKNHSSGINWQNFNIGLNSQTSDNTNSFMQIQNGQGFVKNLGLRANLNF
                     DSIVNFLSQSGKTSVLSNPKLMALNNQQAIISIGDTVNYQVKESSKGTENGTTVSESY
                     SNYSIFIGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKL
                     SSVVQVENNQTLILGGLISHNRSQNDNSVNFLSKIPILGSLFRSEDENSNITEIVFII
                     TPSIVDNTHIPSLRELGFKYNE"
     gene            complement(15046..15357)
                     /locus_tag="ACJE1S_000864"
     CDS             complement(15046..15357)
                     /locus_tag="ACJE1S_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HGG0806427.1"
                     /translation="MCFCTLLSYEDFEEYFKILNTKQNVELGNLQNPFFNPTFEKIKD
                     IKIIAIMLDRVKIDNKWYKKGDKIGEAVITDITTKEIILRYDTLDFKIAFKNNDKINI
                     Y"
     gene            complement(15381..18941)
                     /gene="nifJ"
                     /locus_tag="ACJE1S_000865"
     CDS             complement(15381..18941)
                     /gene="nifJ"
                     /locus_tag="ACJE1S_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HGG0806428.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGTVHGSLQTGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLCA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYEHFDRLLDRKALLEFRNSALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERIVIAM
                     GSVTQTLEEVVDHLNSKGEKVGIVKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDIKSAFYGKENAPIIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIIDDVTHTSLQTGEKISLGDESAIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPSWKNLE
                     IKEKEQINAYKGTEFVEKIVKPMNAAKGDELPVSTFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMAKAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKESTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIIANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRYRIENIMNENMQKVPNALA
                     ALFKEWIANKDKGAESVEIKDKMIPILEQNTDIKAVQDILNLKHFLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYSHLIKAIMAAEAYDGPSLIICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTMVGKEPDWDLYESFLMNEVRYNSL
                     KKSNPEHAKELFERNKKDAQRRYRQLKRIAMADFSDEVES"
     gene            complement(19045..19683)
                     /locus_tag="ACJE1S_000866"
     CDS             complement(19045..19683)
                     /locus_tag="ACJE1S_000866"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG0806429.1"
                     /translation="MKKTILFDLDGTLIDSTDAILNSFQGAFKILGLTPKNNEEIKNL
                     IGHPLEHMFKILYHEKAHLSQEFVLAYREIYSQIYLEQTTLLPKAKEALELAFEIADL
                     GIVTTKGGKFTPLLLEHLGVKKFFKTLITLEDVTNPKPHAEPILLALEKMQKTKENAY
                     MIGDTILDIQAAMAANITPLALSCGYGDEDELKRYSIVFPSAYKSVLYIKND"
     gene            complement(19683..20681)
                     /gene="cadF"
                     /locus_tag="ACJE1S_000867"
     CDS             complement(19683..20681)
                     /gene="cadF"
                     /locus_tag="ACJE1S_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HGG0806430.1"
                     /translation="MRKLLLCLGLSSVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLELGLEHYSDVKYTNSTLTTDITRTYLSAIKGIDLGEKFYF
                     YGLAGGGYEDFSKGAFDNKSGGFGHYGAGLKFRLSDSLALRLETRDQISFHDADHSWV
                     STLGISFGFGAKQEKVVVEQTKEVVNKPQVVTPAPAPVVSQSKCPEEPREGALLDENG
                     CEKTIYLEGHFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQK
                     LSERRANSVAKELEKFGVDKSRIQTVGYGQDKPRSSNDTKEGRADNRRVEAKFILN"
     gene            complement(20803..21192)
                     /gene="rpsI"
                     /locus_tag="ACJE1S_000868"
     CDS             complement(20803..21192)
                     /gene="rpsI"
                     /locus_tag="ACJE1S_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HGG0806431.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGIDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            complement(21195..21620)
                     /gene="rplM"
                     /locus_tag="ACJE1S_000869"
     CDS             complement(21195..21620)
                     /gene="rplM"
                     /locus_tag="ACJE1S_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HGG0806432.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
BASE COUNT         7453 a         3734 c         3141 g         7389 t
ORIGIN      
        1 atttttgtaa taaattttta aagtaaaaat cacattaaaa tttaactcgc aatcatttca
       61 ttcaaacaaa tttttatgta aaatctcttc taaaaccacg gtagcataag agcctttttg
      121 caagaaaaac tccatgcaaa aatgggcttt ttgctcatca taacgccatt taacatcttc
      181 taaatacgac cacataaagc gtcttgagcc ttgcatttta gctttaaatt ccaaagcgtc
      241 tttaaaaatt tcattttcca aatttaaagc cagtccttga ctagcctcat aagctttagc
      301 accgattaaa agtcccatag cactgatatc tcttgcctta aaacgttcaa gttcagcact
      361 taaatcctcg cataaaaagc attttccaaa aggataatgc cccaaaacct cgccttttaa
      421 aagcttaaaa aactgctctt gttttttaag ttctttagct tcttctttgg agatgctata
      481 aatttgtgcc aattcttttt cggtaaaatc atttgcaaaa tacgataatt ccactctttt
      541 actcaaataa cgattaaaaa gctcgctttg aaaagcagag attaaaaatt ccttcatttt
      601 gacatttttc atctttttac cacgtaaaat ttcaagccct tctttgtaat tgtccccaaa
      661 ttttccaaag cgttgataac caaaataatt tgcaaacccc tgtttatcta aatttatcaa
      721 agcctgctct aattttaaag catcactagg taaaactttt tttaagcgta taaaaaaaga
      781 atttcctttt aaatggccta ttcttaattt attttcgtga ataaaagttt ctaaaatttt
      841 aagcttagga tgagaaaaat tagccaaaaa actctcgaat tttttaggca tagaaagata
      901 ttgaaaagta gagccttgct tgtctttaag tccagcatag ccaaaatcac gcatcttaac
      961 cccgcttaat tcgcttaaaa ttcttaaagc ttcattagtg cttaaatctt ttttattgat
     1021 atgcaagata agatgttcgc ccttgccact aaattcatac aaaggccttt cacgcactac
     1081 aaaatcatcg ctatttttac taaaatacgc attaatagaa ctgtgtttta aactatataa
     1141 aggcttaaaa atggtgttct cttcctctaa attcatattt tcctttcact gcttttccaa
     1201 agatatttaa tttcacaccg tgttttttgg ctattgtttt tatattttga cgctcttttt
     1261 catcaaaagc aaacaaaatt tcatattctt ctccactata aagcgtataa tcatcaagtt
     1321 ttttaaacca agaaatgccg catttatttt gtgccaaaag tcttgataag tctttactca
     1381 aaccatctga aatatccata gcacaagata taaaaggggc gatttcataa aaaaaatcag
     1441 gccttaattt tggctttata aatacatgat ttgaatttaa agtgccacca ttttgcaaaa
     1501 tttcaagccc tcttaaactt ttacccaaaa cccctgtata agcaagcaaa tgtccttttt
     1561 ttagtccttt tctaaaaata gccttatttc tcactttaga aatgatagta atgctaatat
     1621 caatcttatc attactaatc gtatcaccgc ctataatttt gatattaaat tttttagccg
     1681 tttttaaaaa acctttttgc aaggccttaa tctcatcttc acctaggcta tttggcaaag
     1741 caagccctaa aagtgcgtat tttggcttag cattcatcac aatagcgtct gaaatattta
     1801 caagcattgc ttttgtagca atttgctcta agctaaacca ctctctttta aaatgcacat
     1861 tttcaaaaaa caaatcctta ctcaagcacc atttatcgat aatagctcca tcatcgccgt
     1921 ttttttcatt taaaaaagct ttgattataa aatcttcctt attcatgaaa agattttata
     1981 aaatttcctt ttaaattcta gtgaatttta aaaaaatttt atataatact tatcaaaagg
     2041 aaaaagcatg aaaaatttag aacttagaat ttttagattt gataaacaaa aagattatga
     2101 ggcttattat aaaccctatg tttataataa ttatgaaaat tttgccactc tttatgattt
     2161 acttttgcaa gtgcaaaatg atgatattta ttttgatttt gaaaaaaatg ataaaagcta
     2221 tatcgtagtc aataaagaat ttttaccatt aaatacacct ttagatatct tggtgaaaaa
     2281 atacgatttt aatctcatca tagagccact aagcaccaaa agatcagtaa aagacctcat
     2341 tatcaacaaa gatgattttt tagaaaaatt taaatacctt gctccatttg caagtgagga
     2401 agataaaaag ctttatgaaa aatatgatta tttgtattat tcaagcgaaa ttttagactt
     2461 tttacctgaa tatatgggcg atgcagtgtt ttatctggct tcaaaaatga tagaaaaata
     2521 tcctgataaa aaaataaaaa ttttaaagac aatttgcgat acgcaaaaag gcatctttta
     2581 tcatcttaca agtaaaaatg aagatttaga aaatactatc aaaaatttac aaaaagaaat
     2641 catagattta aaacttatca acgaagcggc tttggaattt gacttgccaa aaatcaatgc
     2701 ttttgataat gaaatcaaag aacttggtga aattaaatat gattttaatg attttaatat
     2761 cgcatgttat ggttttaaga tcaaagatga tataaaatca aaaatcaaag ctcattttat
     2821 ctcttatgaa aatagcgata aaaacaatgg attttcacta cttcaactaa accctgaact
     2881 tagctataaa atggcagcaa atatcatcct tgatgcttac gatagtggtg ctgattttat
     2941 ggtggtaaat caagcaaaag atttttatat gtttgacact tgctcgaaaa aacttatgca
     3001 aagtagtgga agagaattta aggattttta tgttttaagt tattttgaat tcctttcttt
     3061 aatccaaggc attaaaaatc cttctttgca aaatcatgac ttgaaagtaa gtttgatatg
     3121 aaaatttctt tagaatgtaa agatttgatc atcgaaaaag ccttagagct ttttttaaaa
     3181 gagcatttag tgatgaaaaa ggactgcgat tttatcataa gcgatgaaaa aatctctact
     3241 caaaagcctt tatttatcat cgctaaaaat tcaccctttt taagtttgcc ttttagcaaa
     3301 gaagctctca tgaattcctt aaatgaattc gatagcgcgc taaaagcaac agctcaaaaa
     3361 ctagccgatg aaagaagaag agtgctagaa gcaaggatag atgaaatcgc aagtgaattt
     3421 aaaagagact atcaaagcaa gatagatctt gctatcagcg agcttaaaga taaactggtt
     3481 aaagctttaa tgtatgaata atgaatttat aagcgttaag gattttttac aaggtaagaa
     3541 aaatatccat tttaacgact ctacccagcc caataaaaaa gaaaaaacca aaaaaacctt
     3601 gcctaaatta tatacaagca tagaaagtgg catatataag ggtaaaaaac tgcttttacc
     3661 tagtcttcaa accacaagaa gcactaaaag tatcgtaaaa aaatgtgttt ttgatgtctt
     3721 aagatcagat ttaagaaata aaatttttat cgaagctttt ggaggaagtg ctttaatggc
     3781 tgctgaagct ttaagcaatt acgctcttaa agcttatgct atagaacttg atttaaacgc
     3841 ttataaaatc gctttagaaa atgctaaaaa tatagataca aacttaaaag taattcatgc
     3901 taatactttt gaaatactgc ctaaacttat agaagattct aaagaagata tcattttata
     3961 tcttgatccg ccttttgata taagggaggg ttttagtgga atttatgaaa aaatttataa
     4021 ttttttagaa aaattaaaat tagatgcttt attttgtatc attttagaac ataattctaa
     4081 aatcaaaact cctgataata tagcaaattt taccaaaata aaagaaaaaa aattcggatc
     4141 aactagtctt agtttttatc aaaaaaatat tctagaagaa taaattttaa tcttggaaca
     4201 cttattgctt cttttattct aactatcaga ttaaaggaag aatcgatgag ggttttaata
     4261 ttttttttac ttttgatgac aagtgttttt gcaacacaaa taaaagatat agccaatacc
     4321 gtaggcgtaa gagataatca gctcataggt tatggtcttg ttgtaggatt aaatggtagc
     4381 ggagatggaa caagctcgaa atttacacta caatccatat ccaatctttt gcagggtatg
     4441 aatatcaaag tagatcctaa cgatatcaaa tcaaaaaaca cagcagcagt tatggtaaca
     4501 gctaaacttc cagcctttgc aaaaagtgga gataagctcg atatcacagt ttcatctatg
     4561 ggcgatgcaa aatctttgca aggtggaaca ctcttgctta ccgcacttcg tggaatcgat
     4621 ggggaaattt atgctattgc acaaggttct atctcaacag gaggattaac tgctagacca
     4681 ggaggagcag gctctcactc tactgctgct actgtgatgg gtggtgctaa tgtagaaaga
     4741 gaaattccgc aaaattttag ccaagatagt gatttaaccc taagcttaaa agtagcagat
     4801 tttaaaacag caagcgatat agaaagaatt ttaaatacta tatttgaaga agatgtggct
     4861 agagctattg attctcgtac ggtaaaactt aaaaaacctg aagatctttc taatgttgat
     4921 tttatggcaa gagttttaga gcaagatatt gcttatactc ctcaaagtaa ggtaattatc
     4981 gatgaaagaa caggaacggt gattgcagga gtggatattg aggttgagcc tgttttaatc
     5041 acccataaag atattaccat aaaaattgat ccaaacaata atgcagcagc agctcaaaat
     5101 gagatcgata tgaaagatgg tggctttgta gaccctaatt caaataccct aagaatcaac
     5161 aatgctaaaa gcacagttgc aaacattgct agaatgctaa acaaacttgg agcaacgcca
     5221 aatgatatca ttgctatcat ggaaaattta aagcgcgcag gtgcaattaa cgcggatttg
     5281 gagatcatct aatgaaagtg gataattttt taaatactta tagtatgaat agcgctttac
     5341 ttgatcgtgc agccaaagca agaagtttag aatcaagcat caaaataaat gacaatgata
     5401 tagttacaaa gagcaaagaa gatgaagcct taaaagaaca aacggatgct tttgaggcat
     5461 tttttttaaa gcaagtttta gatgtatctt taaaaagtca aaattcactc tttggaaaag
     5521 atgccagcga tgaaatatac tcttccatgt ataatgatac catgagtaaa gctttaagtg
     5581 gaggtatggg tttttcaaaa ttattatacg attttttaaa agaaaggggt taagtttttt
     5641 aaatttaggt cgatatggtt tgtagaggat tataactaag atcaaggagg cagaaatgat
     5701 caatcctata caacaaagtt atgtggcaaa taccgcatta aatacaaata gaatagataa
     5761 agaaactaaa acaaacgata ctcaaaaaac ggaaaatgat aaagcgagta aaatcgcaga
     5821 gcagattaaa aatggtactt ataaaatcga tacaaaagct acggctgctg cgattgctga
     5881 ctctttaatc taaaaacctt cattctcctt tttttgagag agaaaaggag aaaatatgct
     5941 taaacaaaga cttgatgaag taaatgctat cttagcaaaa cttatcgctt taaccgaaga
     6001 agatatagaa aatatcaaag tggctaaaca tgagagtgta acgccaagtg tagaagaaaa
     6061 aaacaaactt atcgcggaat ttattacagc taaaaaacaa cttgatgttg ccttggttga
     6121 gctaaataat agctctacaa aagggcttag tgaactctta gatgatgaag ataaacaaaa
     6181 actagatcta cttaaaaaaa atcttcaaaa ccttcatagt aaaaacaaag agtatgctaa
     6241 atttgttctt attgtcaaag attttcttga tggcttagta aataaaatgt ttgatatcaa
     6301 tgatggaaca aataatgctt atggagataa aaagacaaat ccagagtcaa ttttcaagat
     6361 caatgtataa ggatttataa tgggtatttt tggaacatta tacacaggtg ttacaggctt
     6421 aaaggcaagc gaagttcaaa tcgcaacaac tggaaataat atctcaaatg ctaatgcaac
     6481 tttttataca cgccaaagag tggtgcaaac tacaaatggg tatattacca caggtggagt
     6541 tcaagtaggt acaggaacta ctgtagaaag tatagtgcgt ttgcatgatg agtattctta
     6601 ctataaatta aaaggtgcat ctactcaact agaatatact aaatatatgg cttccacttt
     6661 acaagaaatt gcgcagcgtt ttcccgactt acaaaatact ggaattttgc aagatttaga
     6721 aaattacaat aaagcatgga atgactttgc ttcaaatcca aatgaaaatg ccaccaaaat
     6781 agcccttgta aaagcttctc aaaccttgac agaaagtgta aataatacct ttgctacctt
     6841 agataaaatc caaaaaaaag taaatgatga tattaaaaat acagttgatg agattaatag
     6901 aattggcgaa gaaattgcta ctataaataa acaaatttat ggacaagaag ccttaccaac
     6961 agaacacgca aatgaactta gggatagaag agatgaactt gagcttactc tttcaaagct
     7021 agttagtgca gttgcaagca aaaatgaaat caatcaagac aatcgccttg atacaaccat
     7081 cactgatcca ggacatcaat acaatctcag catagaaggt tttagtatag tagatggtgt
     7141 taattttcat cctttaaaac ttgattatga tgataaaaat aaagcttata gcatttatta
     7201 tgaaactcca gatgaaaaag ttcgcgatct aactgcaaaa attaacggtg gacaacttgg
     7261 agctcaactt gacttacgcg gaagaaatta tagcaaaagc gaaggaaaat atagcgatgg
     7321 aatcattcaa ggctatatgg attctttaaa tacctttgca aaaaccatga tcaatgaaac
     7381 caataatctt tacgcaagct cagcaaaaag ctcagtaact tctgattatc ttccaggact
     7441 tacagaggac attcctttgg taaattatga taggaccata cagcctggaa gttttgatat
     7501 agttatttat gatgataagg gcgataaaaa acttacaaaa accattaccg ttgatgtaaa
     7561 taccactatg gaagatatca tgcgtcaaat cactgctaac acagatgata atggcaacaa
     7621 taatgcaaat gatgatgttg atgatcatat caatgcaagt tttagctatg atgcaaaaac
     7681 aggggatagt ttatttcaaa tcaatgcaaa atcaggcttt aaagtagcca tagaagataa
     7741 gggaaccaat tttgccggtg catttagcat aggaggattt tttagcggaa ctaatgcaag
     7801 tgatatgaaa gtaaaagatt ctatcttaaa tgatccaagc acagtaagag caagcttaaa
     7861 cggtgttgat agtggaaatg atatggcaaa taaaatcata caacttcaat atgataaagt
     7921 gaatttttac aatgaagatg gaacaattga taatcttact atggaagagt attaccgcaa
     7981 gcttacgggt aaaataggct ctgatggtga aaacaataat gttgtaaatg cgagtaatca
     8041 aacgctttat aactccgttt atagcgaata tcaatctaaa agcggggtaa ataccaacga
     8101 agaattagcc gctctcatac aatggcaatc aagctatggt gctgcagcaa aaatcgtaac
     8161 cacagtagat caaatgctag ataccttatt agggcttaaa tcctaagctc tagcggtatc
     8221 tagtgaaaaa ttttactcca cttaaaaaca aacttgattc tttggtcgaa gaaaaaaata
     8281 ccaacaaagc tctttttgaa agtcctgatc ctttgcaagt tgctaaattt cataatgatg
     8341 aatttatcgc tttactttgt gctttatttg cttatgggaa tgctaaaaat atagtcaatt
     8401 ttttaaaaaa acttgatttt tctttgcttg atttaagcca aaaacaaatt caaaaagaac
     8461 ttaaaaattt aaaatatcgc tttcaaaatg aaaaggatat acaagaaatt tttctcactt
     8521 ttgcaaggct taaaaatgaa atttcactcc atgaactttt tagtacagcc tatcaaaaaa
     8581 gagaaaatac caccgatgca atcctagctt ttttgcaaaa aatcaagact ttaaattcgt
     8641 attcgagtta tggttatgat tttttctttg gtaaaatttg gcaaaatacc cctacttcac
     8701 ctcttaagcg ttataatatg tatctaagat ggatggttag aaaagatgag cttgatcttg
     8761 gactttttac caaaattcac accaaagatc ttttaatccc tcttgataca catacacata
     8821 aaatttcctt gactttaggt cttctaaagc gtaaaatata cgactataaa agcgttttag
     8881 aactcacgca taatttaaaa agattggatg caaatgatcc tataaaatat gactttgcgc
     8941 tttatcgttt ggggcaaaat aaagaactta gcaaactaaa ggagtaaaaa tgggctttga
     9001 acatctagat acgatttatt attttgtatt gttttttgta gctctttttg caggatttat
     9061 tgattctatt gtgggtggag gtgggcttat cacacttcct gcgcttatag cctgtggaat
     9121 tcctgcacat ctttctttgg caaccaataa actccaaagt gtctttggct cttttacagc
     9181 gactttaact tattttaaat caaccaccct acctcatctt gcttatggta tttttttcac
     9241 agccttaggc gcagccatag gaagttacag cgtgcttttt gtaaaagatg agcatttaaa
     9301 acttatcatt ttgattttct taactttgac ttttttatac actgctttgc gtcctagttt
     9361 gggtaaacac gagagtgaag caaagataaa aaatatcaaa ttttttcatt taatttgtgg
     9421 tttaactttg ggtttttatg atggtttttt agggcctggg acgggttcat tttggatttt
     9481 tgcttgcgta atgctactgg gttttaatat gaaaaaagca agtattaata caaaaattct
     9541 aaatttcacc agcaatgtcg ttgctctttt tatctttttg tggcgatatg aacttttatg
     9601 gatagtaggt ttgcttatgg gtgtaggaca aattttaggg gcctatcttg gttcaaaatt
     9661 agtacttaaa accaatggca aatttataaa aaccttgttt ttaatcgtcg taggtgctac
     9721 tatcatcaag gttgcttggg attatttttc ttaaaaattt actcctgagc taagttccca
     9781 tataggtaaa aaaattccaa gtgctaaaaa caatactaaa atcgcaaccc ataaagtcat
     9841 tataggttct aaaaagctta aaaacttgtc cattaaattt tcacttttgt ttttataata
     9901 tttcgcaatc tcctcgctca aaaactcaag cttagaactt ttcatagcta tactcaacat
     9961 agaaaaaacc aaaggatcaa aaagatctac ttttttaaag gcgtgactta tttcaaggcc
    10021 agaatccata aatgttctaa tttcttgata atacaataat acctttttat tatttaaggc
    10081 caaagtggct aatttaaaag cttccaaaag agaaatgccg ctttttaaaa gtaaagagaa
    10141 aatcataaaa aaagaataat tttgctgata aataataaat ttagacaaca aaggaagttt
    10201 taaaagcaag ctatcgcaaa aatatgaaaa gaaataatat tttctataca aaaataaagt
    10261 aagaaataaa ataagtgcga tcaaacaaaa cacaagcaaa atatacttat ccaaaaaatt
    10321 ataaatataa attataagct cggttataaa gggtaaggct aaatttaaat cctcaaataa
    10381 atctttaaaa ttaggcacaa caaaaagcat gagtaaaaca aaagccgcgc acacacttaa
    10441 aaaaacaatc aaaggatatc ttaaagcttt tttgactctt tgttcatttt ctacattatt
    10501 ttgtcttaat cttgaaattt gcatgaaaat ttcacttaat tttcctgtgt tttgggaagt
    10561 tttaataagg gctaattccg catgagtaag cccaaaattt gcattttcaa aagcaaggct
    10621 taaattttgt cctaaattta aattatcgca aagcttggca atcatcttgt gagaatatat
    10681 tttatcaagc tcctttaaag catcttttat gctgattcct acttcgcaaa gcaaagataa
    10741 ttcttgaaag aaaaggataa atcttgcatc atctaatctt ttaaaacttg ctttttgtat
    10801 ctctttgata tttaaaattt cccatttttt agcgatagct tttgcttgag cttcgtttaa
    10861 atttttagcc cttaaatgct ttgtctgttt tgttttgcct ttaatctcga gctcataaag
    10921 cttcattaag tacccttaaa agctcatcta tgctagttat accctctttt gctttttgca
    10981 aaccttgctc aaacatactt tgaaaaccct ttactttagc aagctctaga attttatttt
    11041 tataaccacc ctctctaata acttgagcta tttcctcatc gatatataaa cattcactga
    11101 tgagttctct accttgatat ccactatgat gacaatactc gcagccttta gcttcaaaaa
    11161 aatcaccttt tatttcataa accttagtgc ttttttgctt gcatttagga caaagcttgc
    11221 gcactaaacg ctgggcaatg acaagcctta aagcagaagc gatcaaataa ggctttgcac
    11281 tcatgtcaat taatctatct atggtagaaa tggcattatt tgtatgcaaa gtacttaaaa
    11341 gcaagtgccc cgttaaggaa gccttaatcg ctatatcaag gctctcctca tctctgattt
    11401 ctcctaccat gataatatca ggatcttgtc ttaaaatggc tcttagggca ttattaaatt
    11461 caagtcctgc ttttggattt agcaaaattt gctgaattaa aggcatttta tattctatag
    11521 gatcttccac agaaattatt ttcttttcta tgctttttag ctcatttaaa caagcatata
    11581 aacttgtact ttttccactt cctgtaggac ctgttagtaa aatcattcca taagggttgt
    11641 atagggcttt ttttagaatt gtaagatttt tttcgcccaa atttaaattt tctaaatcca
    11701 aaatttcttc gttgtgtttt aaaattctta tcacaatgct ttcgccattt tgcaaaggca
    11761 aagatgaaat cctaaaatca tatctatttt ctttgatttt aagctcaaaa tttccatctt
    11821 gagcctttct tgattctgca acattaagct gcgataaaaa tttaatatga aaaaccaaag
    11881 cctcataaat atctttttca agacaagcaa attcgcgtaa aattccatct actctaaatc
    11941 ttatcaaagt atcattttct cttgcttcta tatgtatatc gctaggatta aattcaagaa
    12001 tttcatcgag tataaaatca aaaatttgac tgatacaact ttgctcatct tgacttctat
    12061 tttctttcca ttctaatcta agattggtgc ttaaattttt aagtttttct ctaacttgaa
    12121 gtttatataa aaatttcata atcttaaatt cgcttgcgat caaaacttct atattcttaa
    12181 cttcataaaa aattctaatc tcatctaaaa gctctaaaga acaaggtttg gagcttgcta
    12241 tatgaagtgt attttcttta cttaaaatgg gcaagatttt aaatttaaaa agaaaactac
    12301 atggaaattt ttcacccaaa ctaagatcaa gttcctctaa agtagaataa gaaatatttt
    12361 tatcactagc caaagctttt agaaaaattt cactatcgat tttatgctca cgatcaattt
    12421 gctcaagggt gattttacca ttaatataat cttcaaataa aaatcgctca atcatctatt
    12481 tccttatcaa attcaatcaa gccataataa cttacataag tatccaaagc ttgcttagcc
    12541 tcctcatctt ttcctaaagc ttgtttagcc ttggcaaata aaacccatga gtctgaattt
    12601 tttctatcga tgtcattggc ttttaaagac caaaaaatag acttttcata atctttgttt
    12661 tcataatact gagtagctaa attcatggct ttttgatagc ttggattttg gtaaaaactc
    12721 ctttttaaat cacttatatt taaaatctta gaataaatat caatttgagt tttcaactcc
    12781 tcttctaact catctttgct ttcatctttg gataatcttt cttgtaaaat tttatttttt
    12841 tcatttgcaa tttgcgcttg tgtaatttgc caattgagtg tttttttata ttctaaagct
    12901 tctaaagcta aggccttttg tttgtaaaaa tcttgcacca taaaaaagct tataagcatg
    12961 catgctatca aaatggcaaa gataaataaa aacttaaaat attttttcaa taaatatctt
    13021 ttatatttat cctcaagctc gcgcactctt tcttctatat tcattttaaa aatccctgtt
    13081 ctaatgcgct tagtcttaaa atataatctt gacttttttt attgtttaaa taggtgttta
    13141 attcgcaaaa actttgaagt atcttgtcta aataccttaa atttccttga taaattttca
    13201 taagaaattt taaagatttt tggggaaagt cttgattaaa tttcattttg atataattgc
    13261 ttaattcatt tatatcaggt ttttgaagcc aaaaaatagc actaaaacga cttttaaaat
    13321 actcctcttc aaaaagattg atttttttat gcgagctaag cacaaaactc atttcatcgc
    13381 tataaatccg aattagttct aatacattag gactatacat ccccacttca tctagtatga
    13441 taatttttcg ttttttatct tgtataaaat gatgaaaatc tttttcatct gtaaaaattt
    13501 cattggtaaa atcttcatta tgatatagcg caagtctttg caataaaaca cttttcccac
    13561 taccgctttt accccaaagt aaaatcaaag ctttattttt taataaggca ttgatttgat
    13621 caaaacattc ttgtctaaaa gcaattatat tattcattgt atttaaatcc taactcccta
    13681 agactaggta tatgtgtatt gtctactatg cttggggtga tgataaaaac aatttctgtg
    13741 atattggaat tttcatcttc acttctaaat aaagaaccca aaatgggaat tttagataaa
    13801 aaattaacag aattatcatt ttgtgagcga ttatgagaga taagtccgcc caaaattaaa
    13861 gtttgattat tttctacttg caccacactt gaaagctttt tttgaattgt atcaggcgcg
    13921 atagtgcggg gttctttttg tcttttattg tcctctgggt atttaaagtc gcttagactt
    13981 ggattgatcc taagcatgat ttttccatca tcagaaattt cgggcaaaat attaagcaaa
    14041 attcctatga aaatagaata attactataa ctctcactta cagttgtgcc attttcagta
    14101 cctttagagc tttcttttac ttgataattc acagtatcgc ctatggaaat aatggcttgt
    14161 tgattgttta aagccattaa tttaggatta gataaaacac tggtttttcc actttgagat
    14221 aaaaaattga caatggaatc aaaattcaaa ttcgctctta aacccaaatt tttaacaaaa
    14281 ccttgaccat tttgtatttg cataaaagaa tttgtattat cgctcgtttg agaatttaat
    14341 cctatattga aattttgcca attgatccca ctagaatgat ttttattaag atttacagca
    14401 agtatactca catctataat aacttgtttt ttaagacgac tttcaagctt ttgtaaataa
    14461 gcttttacgc gttgaagctg agaatgcgtt ccagtaacga taacaagccc agcatttgga
    14521 ttgactatag gtgcttttat atcatagttt tcatgtgagg agctaagcaa aatcataatc
    14581 tctttttcta tattttgcca aaagtcaaat ttttccatac ttttaatcat attatcttca
    14641 ttatcttcaa aagcgctata atactcactt tgccttggct tagaatccac cgaagccttg
    14701 gttatgcttt gtccttctct aactgaagta atatagttga ttttaaaaat tctagtttgc
    14761 aaagcagaaa tttttaaaat cttgccatca aatttataag ctagatcctg ttcttctata
    14821 aaaagtttaa aaatttcatc taaactcatt tggtggatat tgatactgct ttgaatggct
    14881 tttagttttt ccttagcaat tgtatcttta attaccacgc taaaagagca ataactagca
    14941 agttctttta ggctttcttc tatgcttaga tcttcattga tatttatatc aaataagcgt
    15001 ttttggcatt ccatggcata aataagattg gtaaaaaata gaatcttaat aaatattaat
    15061 cttatcattg tttttaaacg ctattttaaa atccaaagta tcatatctta aaataatttc
    15121 ttttgtagta atatcagtaa tcacggcctc ccctatctta tcaccctttt tataccattt
    15181 attatcaatc tttactctat caagcataat agcaataatt tttatgtctt tgattttttc
    15241 aaaagtagga ttaaagaatg gattttgaag atttccaagc tctacattct gcttggtgtt
    15301 taaaatctta aaatattctt caaaatcctc atatgataac aaagtgcaaa agcacaatgt
    15361 tatacttaaa aaatatttta tcagctctca acctcatcgc taaaatcagc catagcaatt
    15421 cttttaagct gtctataacg gcgttgtgca tcttttttat tgcgctcaaa taattctttt
    15481 gcatgctctg gatttgattt tttcaaagaa ttataacgca cctcattcat taaaaagctt
    15541 tcataaagat cccaatcagg ctcttttcct accatggtta aaggattttt gccttgttct
    15601 tctagtcttg gatcaaaagt ataaagaggc caataaccgc attttgtagc aagttcgcct
    15661 tgctcgcctg aatatccaag cccacccttg ataccatgag cgatacaagg agaatagcat
    15721 ataatcaaag aaggaccatc ataagcttca gctgccataa tagctttaat taaatggcta
    15781 taatttgccg tagaattaac ttgtgctaca aaaatataac cataagtcat agcaatctga
    15841 cccaaatctt ttttctgtat aggttttcct gctgcggcaa attgcgcaac tgcacctgtt
    15901 cttgaagatt ttgaactttg gccccctgta ttagaataca cttctgtatc aagcactaaa
    15961 atatttacat tttcaccgct tgctaaaaca tgatcaagcc cgccataacc tatatcataa
    16021 gcccagccat caccaccaaa aatccaatga gattttttac ttaaaaaatg ttttaaattt
    16081 aaaatatcct gaacagcttt aatatcagta ttttgctcta aaataggtat catcttatct
    16141 ttgatttcta ccgattctgc acctttgtct ttattagcaa tccattcttt aaacaatgct
    16201 gctaaagcat taggtacttt ttgcatattt tcattcataa tattttcaat gcgatatctt
    16261 gtattttcag ttgcaatttt catacccaaa ccaaattcgg cattatcttc aaacaatgaa
    16321 ttcccccaag cagggccatg tccatttttc acgctttttc tataaggagt agaaggggct
    16381 gaacctccat aaatcgaact acatcccgta gcattagcga taatcattct ttcaccaaat
    16441 aatctagtaa tcaaagtaat ataaggagtt tcaccacaac ctggacatgc tccatggaat
    16501 tcaaataaag gttgagcaaa ctgagcccct ttggtgcttt ctttatttaa aatatcatct
    16561 ttgtaagtaa tttctttaaa taaataatct gcattttctt gctcaccaaa atccatttct
    16621 tcttgaagag gaaccataac caaagatttt tccttagtag gacactcatg cacacaaagc
    16681 tcacagcccg tacaatcaag tggagaaacc tgaattttga agctcaattt ttcaccttta
    16741 gtacccttag cttctaaagc gtgatctttt actcctcttg gagctttagc catttcttca
    16801 tcattgatta aaaatggtct aataaccgcg tgcggacata cagaagcaca ttgattacat
    16861 tggatacaat tagcctctat ccatcttggt accattaccc caacgccgcg tttttcgtat
    16921 tcggtcgttc catgctcaaa gcttccatct tcataaccta agaaagtaga tacaggtaat
    16981 tcatctcctt ttgctgcatt cataggttta acgatctttt caacaaattc agtacccttg
    17041 taagcattga tttgttcttt ttctttgatt tctaaatttt tccaacttgg atcaacttct
    17101 acttttacaa gtccatctgc tcctacatca atagctttgt aattcatctc tacaatagca
    17161 tcgccttttt tgctataaga cttataagct aattctttca tatatttttg agcatcttca
    17221 taaggaatga tttttgcaag tttgaaaaag gcagattgca taatagtatt tgtgcgattt
    17281 ccaagtccta tatcacgagc aagttttgta gcattgataa tataaaaatt cacttctttt
    17341 tcagccaaag tcttcttaac tgcatctgga agttgtctta tagtttcttc agcattccaa
    17401 atactattta aaaggaaagt tcctcctttt cggattcctg ctaaaacatc ataaatttca
    17461 agataagccg ctaccgaaca agcgatgaaa tgtggagttg aaacaagata ggttgagcgg
    17521 attggttttt tagaaaatct taaatggctt cttgtatagc cccctgattt tttagaatca
    17581 taagcaaaat acgcttgtgc ataaaagtct gttttatctc cgatgatttt aatagaattt
    17641 ttattagcac ccacagtacc atctgcacct agcccataaa ataaacattc tatagcgctt
    17701 tcatctccta gtgaaatttt ttcacctgtt tgcaaagaag tatgagtaac atcatcgata
    17761 atacccactg taaaaccatc ttttggatta tcaagtttaa gattttcaaa taccgctatc
    17821 atttgtgcag gatcaacatc tttagaagaa agtccatatc ttcctcctac gataatagga
    17881 gcattttctt taccatagaa agctgattta atatcaagat ataaaggctc tccaagactt
    17941 cctggctctt tagttctatc taaaacagct atttttttca cagattttgg cataacatca
    18001 aagaaatatt ttaaactaaa aggacgatat aaataaacct ttacaatccc tactttttca
    18061 cccttagaat taagatggtc aacaacctct tcaagggttt gagtcacaga acccatagct
    18121 ataacaattc tttcaggttc tttgtgtcca taataagtaa atggcttata ttctctacct
    18181 gtgatttttg aaatttcttg catatattca tttacaacat ctggtaaagc atcataaaaa
    18241 cgattgctta cttctcttgt ttgaaaataa atatcatcat tttgtgccgt accgcgtgtt
    18301 ttagggtttt caggatttaa agcactattt ctaaattcaa gcaaagcttt gcgatctaac
    18361 aatctatcaa aatgctcata atccattact tcaacttttt gaatttcatg cgaagttcta
    18421 aaaccatcaa agaaatgcaa aaatggcact cttcctttaa tcgcacataa atgtgcaact
    18481 ccagctaaat ccatagtttc ttgcacagaa tgcgaacaaa gcatagcaaa accaatttgt
    18541 cttgcagcat aaatatcttg atgatcacca aagatagata aagcttgcgc tgctaaagaa
    18601 cgcgctgcca catggattac acaggggagt aattgccctg caattttata catatttgga
    18661 atttttagta ataaaccttg agaagctgta taagttgtgg ttaaagctcc tgtttgcagt
    18721 gatccatgca cagtacctgc tgcacctgcc tcactttgca tttcaacgat ttttactgga
    18781 acaccaaaaa gatttttttt acccgcagct gcccacatat cagtataatc agccatagga
    18841 gagctgggtg taataggata aataccggct acttcagtaa aggcgtatgc agcatatgca
    18901 gcggcctcat ttccatccat agttttcata attttaccca tagaaacctt ccttttatta
    18961 ttaattgata atttttataa ttttttagct atcaatttac tataaattct cttaaaaggc
    19021 gtttaacaaa aacttgaagt tagtttaatc attttttata tataaaaccg atttataggc
    19081 acttggaaat actatagaat agcgttttaa ctcatcttca tctccataac cacaacttaa
    19141 agctaagggg gtaatatttg ctgccattgc tgcttggata tctaagatcg tatcgcctat
    19201 catataggca ttttctttag ttttttgcat tttttctaag gctaaaagta tgggttctgc
    19261 atgaggcttt ggatttgtta catcttcaag tgttattaaa gttttaaaga attttttcac
    19321 tcctaaatgc tctaacaaca agggagtaaa ttttccaccc ttagttgtca ctatacctaa
    19381 gtccgcaatt tcaaaagcta attctaaagc ttcttttgcc ttaggcaaaa gagtagtctg
    19441 ctctaaataa atctgtgaat aaatttcacg ataagctaga acaaattctt gactcaaatg
    19501 cgctttttca tggtaaagaa ttttaaacat atgctctaaa ggatggccta taagattttt
    19561 aatctcttcg ttattttttg gagttaatcc aaggatttta aaagctcctt ggaaagaatt
    19621 taagatggca tcagtagaat caatcaaagt gccatctaag tcaaataaaa tagtcttttt
    19681 cattaattta aaataaattt agcctctact cttctattat ctgctctacc ctctttagtg
    19741 tcattgcttg agcgtggctt atcttgacca taaccaactg tctggatacg acttttatct
    19801 acaccgaatt tttcaagctc ttttgcaacg ctgttagcgc gtctttctga aagtttttga
    19861 ttgtatgatc tagaacctat attatcagta tgaccctcta aaatagtatc atatcttaca
    19921 ttttcatcta aaatttgagc aatttctttg atttgttctt caaaggctgg gttgatattt
    19981 actttatcaa aatcaaaatg tccctctaaa taaattgttt tttcgcaacc attctcatcc
    20041 aacaaagcac cctctcttgg ttcttcagga cattttgatt gtgagactac aggagctgga
    20101 gcaggggtta caacttgagg tttattaact acttcttttg tttgctccac tacaactttt
    20161 tcttgcttag cgccaaaacc aaaactaatg cccaaagttg aaacccaact atgatctgca
    20221 tcatggaaag aaatttgatc tcttgtttca agtcttaaag ctaaagaatc actaaggcga
    20281 aattttaaac ctgctccata atggccaaat cctccacttt tattatcaaa agcgccttta
    20341 gaaaaatcct catatccccc accagctaaa ccataaaaat aaaatttctc acctaaatca
    20401 atgcctttaa tagcactcaa ataagttcta gtaatatcgg tggtaagagt agaatttgta
    20461 tattttacat ccgagtaatg ttctaaacct agttctaatt gatcaagcca aaaatcatca
    20521 aaatgatacc ctagtctaat ccctggtgca tagcgattat ccatatctaa attaccttca
    20581 aaataattgt aattcaaagt aggagtgatt tcaaatttta cattgttatc tgcaccaaat
    20641 aaaacgcttg acaaccctaa acatagcaat aactttctca tcaaaagcct ttcatagata
    20701 aattcactta agtagtacga agttcaatta tatcataaaa tataaaaaaa ataaatagta
    20761 aatagagata aaatataaaa agcgggaaaa tcccgccaaa gattaacgtt tagagaattg
    20821 tgggcttctt cttgctttgc ggcgtccata ttttttacgc tcaacagttc tgctatctct
    20881 agtaagaagt cctttaggtt tcaataaagc tctaaaatca gcatccatag ccgctaaagc
    20941 tcttgaaatt ccgtgtctta aagcttctgc ttgagcacta taaccaccac ctaaagtcgt
    21001 tgctttgata tccattgaag tttcttgctt agttacaagt aaaggctgaa ctactttaag
    21061 cttgatcgct tcatgtccac caagccaagt atttaaatcg ataccattaa cgctgatttt
    21121 accgctacct ggttttaccc atacttttgc tatagcagtt tttcttttac ctgttgcata
    21181 tgttgttgcc atgattattt tccttcttta gcaatttgcg cagtgtgtgg gtgctcacta
    21241 cccgcataaa tttttaattt tttaagcatc gctctaccca aatttgtttt aggaagcata
    21301 cctctaactg ctaatttata taattttgca ggattttttt caagtaaatc tccgaatttt
    21361 tcgcttttta cgcttccaaa atatcctgaa tgtctgtgat aaagcttatc ttctgcttta
    21421 tttgcacctg taaatacagc ttttgaagca ttgatgataa tcacataatc accacaatca
    21481 acattaggag taaagcaagg tttgttttta cctcttaaaa ttgttgctac ttcagttaaa
    21541 agacgaccaa agcgtttgcc ttctgcgtct aaaacaatcc attctcgttt aacttcgttt
    21601 ggctttgtta tctttgtcat aatttttacc tttgccaaaa attttttaaa aatgagatta
    21661 taattatttt tacttaaata atacttaatt taagaatatt taaagtttag tagcctt
//
LOCUS       DBBXOW010000024        21492 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.025, whole genome shotgun sequence.
ACCESSION   DBBXOW010000024 DBBXOW010000000
VERSION     DBBXOW010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21492
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.025"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(252..1229)
                     /locus_tag="ACJE1S_000870"
     CDS             complement(252..1229)
                     /locus_tag="ACJE1S_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HGG0806433.1"
                     /translation="MLGIDLGSNTLRAVFINEKFEKLDEYEFIIGSAKNLDKTGKISD
                     EAIEKLRNALQEIAKKYDLSQARAVATAAFRKASNTNEIFTRLKQEFQIDFKVIDAKI
                     EAKISVLGMKRGLLNLGLNLDCGYCDLGGASCEFSFRDNFQSFDFGIISFYEKCKIKK
                     IANSFSFKKILQKYPNFPYRFKDKKLKIHFLIHDNFLKTMAFEAFGQSNGLKKALKQS
                     KMKNIVLNSGVPTALAALKKGLNYEKYEAKKINGARLNINDFLTFGQKLWYMDEKKAS
                     FWVGNTRKNYLVAGCFLLFSIFEREKLIVIDEGLREGLCMADLNLKDYQ"
     gene            1285..2052
                     /locus_tag="ACJE1S_000871"
     CDS             1285..2052
                     /locus_tag="ACJE1S_000871"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004290443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HGG0806434.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIAAKFGDQITLHVRE
                     DRRHAQDFDLENIIRFCKSPINLECALNDEILNLALKLKPHRITLVPEKREELTTEGG
                     LNLNHNKIKESIEKLQNAQIEVSLFINPSLEDIQKSYELKADFIELHTGHYANLHNAL
                     FSNISHTAFALKEFDLSKKTLQSKFEEELNNIEICAKKGVELGLKVAAGHGLNYKNVS
                     QIANIKKICELNIGQSIVARSVFVGLQNAILEMKALL"
     gene            2055..3155
                     /gene="pdxA"
                     /locus_tag="ACJE1S_000872"
     CDS             2055..3155
                     /gene="pdxA"
                     /locus_tag="ACJE1S_000872"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HGG0806435.1"
                     /translation="MKKLAISIGDINGIGLEILARSHEKLSQICTPYYFIHESLLQKA
                     LKLLNLELLNAKIVAFKDAKNYEFTLLKKHNSLEIYSFGLPLNLKVDENFDIKAGEID
                     AKSGLYSFLSFKAASYFVYKNHAHALLTLPIHKKAWEDAGLKFKGHTDALRFFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFQNLSIFLKDFYQETRFKKIGLLGFNPHAG
                     DYGVIGGKEEELMQKAIAFVNAFLNSKKDEKFFKKALKDEKLQKELLLNFNTKGVYLP
                     YPLVADTAFTKSNLKACNRLIAMYHDLGLAPLKALYFEKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKISTKSYFEAAKFALELPSKASI"
     gene            complement(3139..3744)
                     /locus_tag="ACJE1S_000873"
     CDS             complement(3139..3744)
                     /locus_tag="ACJE1S_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806436.1"
                     /translation="MKIILLTILSFLSLWGLSFDELIYKNEVRASFDCSKVKNNGKND
                     DELIICNKIGAINEFENKKLALMDNIFISLYQELLKNANEIIKEDFKLVVKKMFRERK
                     NCAKVISNDLLQADQDPQSPFVYKTDCIEKTYAKVFLELMQKAKKDTQSKERLKQIFN
                     NQVDRYENLIQMSIQDPIDLEIFIDNLAQEGLIDDNARLKL"
     gene            3987..4298
                     /locus_tag="ACJE1S_000874"
     CDS             3987..4298
                     /locus_tag="ACJE1S_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806437.1"
                     /translation="MVVKDIQTTSSSMFSATTKVKEKSTSADEFQATLNEVKNKEEKE
                     DKKTSSSEFTNEDLDLSAVKEDFKSYAWQKMREDQYKKNEEDLLNKLFATIDAGNTAK
                     I"
     gene            4446..5468
                     /gene="hemE"
                     /locus_tag="ACJE1S_000875"
     CDS             4446..5468
                     /gene="hemE"
                     /locus_tag="ACJE1S_000875"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HGG0806438.1"
                     /translation="MIFIDACFKKPTPYTPVWMMRQAGRYLPEYMKVRQEAGDFLSLC
                     KDYKRASEVSLQPVDILGVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFQTPISTLED
                     LNKLDDKNAYKKLNYVYDALKLTREKLPLDKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHEILNKLTQVLKSYLEEQIKAGANAVQIFDSWASALECDKFFDFSF
                     KYMLEISDFIKNKYPHIPVILFPKGISGYLDKIDGNFDVFGVDWSTPLDLARDKLSHQ
                     YTLQGNMEPCRLYDKKAIKQGVENILEIMQNKAHIFNLGHGILPDIPVENAKYFIQLV
                     QESSAK"
     gene            5465..6367
                     /locus_tag="ACJE1S_000876"
     CDS             5465..6367
                     /locus_tag="ACJE1S_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HGG0806439.1"
                     /translation="MKILFGPINSRRFGRSLGIDLSPSKKQCNFDCVYCELEAQKPQE
                     KQDEIVSVEEIILEVQGALEKNVPFDFLTLTANGEPSLYPHLDELISSLRKIAKDKKL
                     LILSNGTVVLDQDKFNTLLKLDVVKFSLDSAISKTFYRIDRALKNINLEKMIEKMAEF
                     KTQFKGDLVMEILVVKDLNDNEEEFIALNQALAKIAPLRVDLSTIDRPPAYAVKKISE
                     ERLLELSKLITSTPVLLPKRHYEGEKLNFNEEELLKMLHLRSQSEIDIENKLDKTSQL
                     LLDKLIKEEKIKILNLAGVKFYKA"
     gene            complement(6364..7557)
                     /locus_tag="ACJE1S_000877"
     CDS             complement(6364..7557)
                     /locus_tag="ACJE1S_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806440.1"
                     /translation="MLLVWIIFIFNIILAFLSIDFTRIHESLEQIKLTFFASIFILSL
                     TLIFFLFRKKRALARKDQKILLIKNEFIHAEEIDIETSLDLIREKIAHLNQDLFKISH
                     EKETYAKLLEDSLYQIGNIEGVVRCLDEEEASKEIKSLVLNALKHQKEQIRLGLNQAL
                     EYHKSIGVAQGNVLQFEASAAIVSDDGLEAFLLANLLSYFGIENTIFKSLSFDINDFH
                     VVFIKDKILEQSSKKADDFIVFGRSKNLYYEYFLSLPFEKKELENILQRKLDKICALK
                     FQTPYQNNVLLFKQNEFDATLFFNIIEKQCSQNMRVNSFSELKKELKKEAYRLILLDY
                     ELIKFDLEQMRSILSAYKKQHPQSHIIFFSRERVRDFDCVSEVLNDISRNDLIALIRK
                     YLPKN"
     gene            complement(7559..9373)
                     /gene="uvrC"
                     /locus_tag="ACJE1S_000878"
     CDS             complement(7559..9373)
                     /gene="uvrC"
                     /locus_tag="ACJE1S_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HGG0806441.1"
                     /translation="MAEILLKNTLKEELQTLPANAGVYQYFNAEGKLLYVGKAKNLKN
                     RVRSYFAFTPNLRANPKNSLRIQKMIEEAVHLEFITTNSEADALILENSFIKQLHPKY
                     NILLRDDKTYPYIYVDFNEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYP
                     LKQKASCKSPCIFYQISRCLAPCDKKITQEEYRLILDKAINALLSPSILVKNLEKQMF
                     HLAQNENYEEAAKIRDQIATIRDLEIKVEIDIAKLEDFEIFALACESSMLSTLRFVVQ
                     NGKIISANSKITPLKNNTDFDKNEIYKQLILENFSVDIPLVANTVYVYEDFEDRELLE
                     EILSQRFDKKISIKVPKIGEKRRICDLAFQNACLNIQKEQKNSDFNIQKELKNYFELE
                     NLPNCIEVFDNSHLQGVANVGAMITYKMGTWDKSNYRKFHLKYKNDYEQMREVLTRRA
                     LEFDKMPAPDLWLIDGGKALLDLAKEIILSSGANVDILAISKEKINAKAHRAKGGAKD
                     KIHSLKGEFALSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLSSSKLVKSGLSAG
                     VIQKLLAYYGSFEAIYEANFEELCQLVGKKSAQKIKED"
     gene            complement(9366..9842)
                     /locus_tag="ACJE1S_000879"
     CDS             complement(9366..9842)
                     /locus_tag="ACJE1S_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806442.1"
                     /translation="MEKFQSPKIIKNTSAILNDLMSKSHYRPLKTLFFCKDFLNSFPP
                     AKQRLIARIYIKNHILNIVTLNSAAYQELNHDNSKIYIKVLIKKYGKMYPLSGFSDIK
                     DLKIFTQKYNNTIKNNENFTAKKPYIELSLGKFENKFENKILAKKFEEIRQMIRNG"
     gene            9979..11514
                     /gene="guaA"
                     /locus_tag="ACJE1S_000880"
     CDS             9979..11514
                     /gene="guaA"
                     /locus_tag="ACJE1S_000880"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HGG0806443.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKEVFNLGLPILGICYGMQLMAHHYKANVAPAGHK
                     EYGKASIEIQKDSDLFKNLPKKQIVWMSHSDKVENLPQGFEVLATSENSPYCVFANEE
                     KKFFALQFHPEVQHSEFGKSILKNFAKYACNCESIWNMGSFAKTQAEKIREEVGKDKV
                     LCAVSGGVDSSVVAALLANAIKDQVIVVFVDNGLLRSDEKEQVEFMFKNTLGINLISI
                     DASKIFLDRLAGVTDPEQKRKIIGNTFIEIFEEEAKKHKDVKFLAQGTLYTDIIESSV
                     IGASKTIKSHHNVGGLPEKMNLKLVEPLKEIFKDEVRALGIELGLSKEIVYRHPFPGP
                     GLAIRIMGEVNRPSLELLRKADVILLEELRSTGWYNKTWQAFCVLLNVKSVGVMGDNR
                     TYDNTICVRVVDASDGMTATFSHIPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            11689..12297
                     /locus_tag="ACJE1S_000881"
     CDS             11689..12297
                     /locus_tag="ACJE1S_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG0806444.1"
                     /translation="MENSIKDSYNKICKKWSEFRKNTSINQCIVDFANNLSPNSRVLD
                     IGCGTGYPIALYLSKQGFQVTGIDISEEMIKQAQKLNLHNATFLVEDILNFKTDKKYD
                     AIIAFDSIWHIRYDKQECIYQIISSLLTSGGLFLFTHGKNDGEIISTMWKESFYHSAL
                     DLEKVHKLLKQNGFDILSSIEDYIEETTGDRELLIIAKKKEL"
     gene            complement(12420..12977)
                     /locus_tag="ACJE1S_000882"
     CDS             complement(12420..12977)
                     /locus_tag="ACJE1S_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HGG0806445.1"
                     /translation="MFFYEYLKNPKQIGAFCSSSQKLGFVMTQNINLRQANYIVEIGP
                     GTGVFTENILKYKNKKAQFFAIEINKNMADKLKRKIVNLDIEIGSAENLPYFLRQRNI
                     TYADVIISGIPWSLLRDHEQEKLLKIIHKSLKPNGYFSTFAYVLPTYSSLKFRQKIFS
                     LFTEVRISKVVWQNFPPAVVYYCKK"
     gene            13113..14573
                     /locus_tag="ACJE1S_000883"
     CDS             13113..14573
                     /locus_tag="ACJE1S_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806446.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFSRQIWNDKKSMPSVGML
                     VEFRTLSSDKKSENGAPVPVSKTITGIKPSKFQEFKEGDFITEHDFWKTNSDDELEDL
                     QNSRRSAYITELYRSIDFDSIEKIPLSFTIPQAIQKYFAHEILSVEALQANLQDEKDI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADKKPNIT
                     KIFNETFLSLQCHYQALIATIDTRKNRLASLEAQMKALQSEIQLKSNAANADPEKLKA
                     RQEKLAKLQKEAEYYRTTLKRLGAIQEDFYKKNYNIFENAFKLSREKLFKKIITGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIETFAQNPYFIVKYAPKKVNYQSLMRDNS
                     FDIVFIDEKHVWESVADIILEGKHFDKIGKTKFKLI"
     gene            14814..16064
                     /gene="purD"
                     /locus_tag="ACJE1S_000884"
     CDS             14814..16064
                     /gene="purD"
                     /locus_tag="ACJE1S_000884"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HGG0806447.1"
                     /translation="MKIMILGSGAREYSIALALKRVDENLEFYFAPGNGATESLGTNL
                     NFKDPVVLATYAKEKEFDLCIVGSESFLAEGVVDIFKQHNIPIFGPTKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFILSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEEASKMLSGESFGEAGKLIVVEEFLDGFELSIFAVCDGNDFVLLPAAQDHKKLLDGD
                     KGPNTGGMGAYAPSSLANESLLRKIQKDIIIPTLAGMKKEGSEFCGVLFIGIMVVGNK
                     PYVLEFNVRFGDPECEVLMPLIENPLELILATTQKRLRHTKIKIKKDYAVGVVCASEN
                     YPYKSSPKSEISITNIPENTHISYAGVSLEDGKLMADGGRVLVCVGTGSSIEEAQKKA
                     YELCENVHFKGKQFRKDIAHQVIQ"
     gene            16061..16513
                     /locus_tag="ACJE1S_000885"
     CDS             16061..16513
                     /locus_tag="ACJE1S_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG0806448.1"
                     /translation="MKEDLLTRLERENLTIASFNKRILAYFIDNLVLSLIVFVIFYDK
                     LLNAKDLFDTAQILGDFYLGFLLLHITYQTIFTYLYGASLGKMVCKIIILDEDLLDKP
                     NLNQSCIRSIVRQISDMAFMLGFAWALSNDLRKTWEDYLARTIVVNVA"
     gene            16503..18551
                     /locus_tag="ACJE1S_000886"
     CDS             16503..18551
                     /locus_tag="ACJE1S_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HGG0806449.1"
                     /translation="MWRKILFLSASLTLLNATQVDIYALDAKKQGDILTANDDVIIFS
                     DFYFITANKAIYNEKTGDLELFGDVNILRGQNERSHSNYAKINLNSNEANFNNFFFSN
                     NNLEVWFQSKTSYLDENVFKSEISAVSSCNVEDPDWEIRFSKGWLNRENNFVHLYNAK
                     LYVKDFPIFYLPYFGFSADTHRQSGLLIPKIVLKNSEGLYYEQPIYIAPYENWDLELN
                     PQIRTDRGFGLYSTLRFIDSPYSIGEVNLGAFRENSSYYHDENLKNQSHYGAELKYAR
                     NDLIKTLLGDNFQEGLWIDATYLNDIDYLNLGSRDYRDLNSLVTSKINYFLADENNYY
                     GAYAKYYIDTSALNNDNTLQEYPSFQYHRFLNNFFDERLRYSFDASFHNFYRPVGPYA
                     NQLNLNLPISYHNAFFDDFLHFTFTERFYASFLNYSHYPQKDHEHYFRNTHDFNLYTD
                     LSKAYDNFFHTLNFGLKYVLPGAKSGSISEDYLEEIDKEEEHLGFYTTQYFYNNEGQK
                     KIKHRINIDYLNKQGEFDEISNLLSYYYNNNISFNSEIIYSDLQDRFTNIISQMEINP
                     NPKFNWSFSHAYQNDEYGKYSFIGTRANYLANANYHLFGGIWFDTQRAHANMWELGYT
                     FQRKCWNYSLMYRERIDPQLTSAGITAKNQSGIYFIFNFYPLGGVKYDFSLAETESKI
                     "
     gene            18625..20784
                     /locus_tag="ACJE1S_000887"
     CDS             18625..20784
                     /locus_tag="ACJE1S_000887"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HGG0806450.1"
                     /translation="MQYSIEINGNLEVFDIEKVAKQAAGAVLMRQGKSVVLAAVAREE
                     KPVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPQVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGRIEEKFVLNP
                     NNEELKNSTLDLYVAGVKDELLMIEMRALPNQKEDEIFIEAPYADVLTQTTSQSMNEL
                     SEDEILEALSLAQKAILNGSNAYEEAFLKHKKSSDLNFKDEIENFELLAFIENNFHDQ
                     IVQAINQMAKSERASELNKIAEKILNFESATKWDEESILNALAKVKHKIVRSQILNTK
                     KRADGRNLNEVRPIAIETNILPNAHGSCLFTRGQTQALVVATLGSENDAQMVDVLTEK
                     NPINERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSIDENYPYIIRLVS
                     EILESNGSSSMATVCGGSLALRAAGVPSLKLVAGVAMGLIFEGDQYAILTDIMGLEDH
                     DGDMDFKVAGSKDGITALQMDIKLGGIDQKILKEALYQAKEGRIHILNIMEEALKEIV
                     VNEEVLPKLELFNVDPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNENE
                     QIKAAKDYIINITSSQKNNKKGFKEKDLSNFEIGEEFEGKVKKITNFGAFIELKNGID
                     GLLHNSKSKNLNLSENQILKVKVSEIKNGKISVDLCE"
     gene            20781..21263
                     /locus_tag="ACJE1S_000888"
     CDS             20781..21263
                     /locus_tag="ACJE1S_000888"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033958 - DNA-deoxyinosine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HGG0806451.1"
                     /translation="MSEFLTHPFKPFFDKDSKILILGSFPSVKSREDGFYYQHPRNRF
                     WPILETLFDTRLENITKQQAFLKEKNIAIWDVLQSCKIKNSDDKTISYAKANDLNLIL
                     SQAQIQAIFTTGKSAYRFFTKFHPHLKAIALPSSSPANLNFSFEQLLQSYKIIKNFIK
                     "
BASE COUNT         7730 a         3292 c         3316 g         7154 t
ORIGIN      
        1 ttcaaataag aaaaattcac aaaatgagtt tcatttccta ctttaatttc actacccaaa
       61 tacttactac gaaattcttc tctttttttt ctctaattcc aatatctctt ctcttatttt
      121 tttatcaaag atataaattc caccataatt acttgcaaga gtttttattt cacttgcttt
      181 ttttctttaa aagcacatgc acttaaaaag attagggtaa ataaagtaaa aaataattgc
      241 tatggtaatt ttcattggta atcttttaaa tttaaatcag ccatacaaag cccctccctt
      301 aaaccctcat caatcactat aagtttttct ctttcaaaaa tactaaaaag caaaaaacat
      361 cccgcaacta aataattttt tcgcgtattt cctacccaaa aacttgcctt tttttcatcc
      421 atataccaaa gtttttgccc aaaagttaaa aaatcattga tatttaatct tgcaccattg
      481 attttctttg cctcgtattt ttcataattt aagccttttt ttaaagccgc taaagccgta
      541 gggacacctg aatttaaaac gatatttttc atcttgcttt gttttaatgc tttttttaaa
      601 ccattgcttt gcccaaaggc ctcaaaagcc atggttttta aaaaattatc gtgaattaaa
      661 aaatgaattt ttagcttttt atctttaaat ctataaggaa aattaggata tttttgaagt
      721 atttttttaa aagaaaaaga atttgcgatt ttttttatct tgcatttttc ataaaaactg
      781 ataataccaa aatcaaaact ttgaaaatta tccctaaaag aaaattcaca agatgcgccc
      841 cctaaatcac aatacccaca atccaaattt aagcctaaat ttaaaagccc ccttttcata
      901 cccaaaacgc tgattttagc ttcaattttg gcatctatca ctttaaaatc aatttgaaat
      961 tcctgtttta aacgagtaaa aatttcattc gtattgcttg cttttctaaa agctgcagtt
     1021 gcgactgctc ttgcttggct taagtcatat tttttagcta tttcttgaag tgcattgcga
     1081 agtttttcta tggcttcatc acttatcttt ccagttttat ctaagttttt agccgaacct
     1141 atgataaatt catattcatc caatttttca aatttttcat ttataaaaac cgctcttaaa
     1201 gtatttgagc caagatctat acctaacatc actatcctta tttaaattta tagtataata
     1261 gcaaaaaagt tctaaaggaa aaatatgctt ttaggtgtaa atatcgacca cattgcagta
     1321 ttaagacaag ctagaatggt aaatgatcct gatcttttag aagccgcttt tatagctgct
     1381 aaatttggag atcaaatcac tttgcatgta agagaagatc gtcgtcatgc tcaagatttt
     1441 gatttagaaa atatcatacg cttttgcaaa agtcctatca atttagaatg tgctttaaat
     1501 gatgaaattc taaacttagc acttaaatta aaacctcatc gtatcaccct agtgcctgaa
     1561 aaaagagaag agcttaccac agaagggggg ctaaatttaa atcataataa aatcaaagaa
     1621 agtatagaaa aacttcaaaa tgcgcaaatc gaggtttcac tttttatcaa tcctagctta
     1681 gaagatatac aaaaatcata tgaattaaaa gctgatttta tagaacttca cacaggacat
     1741 tatgcaaatt tgcataacgc actttttagc aatatctctc atacagcctt tgctttaaaa
     1801 gaatttgatt taagcaaaaa aacattacaa agtaaatttg aagaggagtt aaacaatata
     1861 gaaatttgtg ctaaaaaagg agtggagctt ggattaaaag tcgctgctgg gcatgggcta
     1921 aattataaaa atgtaagcca aatagcaaat atcaaaaaaa tttgcgaact taatatcggc
     1981 caaagtattg tagcaagatc ggtttttgta ggactacaaa atgcgatttt agaaatgaaa
     2041 gcactgcttt aaagatgaaa aaattagcca ttagcatagg cgatatcaat ggcatagggc
     2101 ttgaaattct agcacgctca catgaaaaat taagccaaat ttgcactcct tattatttta
     2161 tccatgaaag cttgcttcaa aaagctttaa aacttttaaa tttagagctt ttaaatgcaa
     2221 aaatcgtagc ttttaaagat gctaaaaatt atgaatttac actgcttaaa aagcataatt
     2281 ctcttgaaat ttattctttt ggcttgcctt taaatttaaa agtggatgaa aactttgaca
     2341 ttaaagcagg agaaatagat gcaaaaagtg gcctatatag cttcttaagc tttaaggcgg
     2401 caagctattt tgtttataaa aaccacgcac acgccctact tactctacct atacataaaa
     2461 aagcttggga ggatgcgggg cttaaattta aaggacatac tgatgcacta agattctttt
     2521 ttaaaaaaaa tgccatcatg atgctaggat gtaaggaact ttttgtagga ctttttagcg
     2581 agcacatacc cttagcaaaa gtaagcaaaa aaatcacttt tcaaaattta agtatttttt
     2641 taaaagactt ttatcaagaa actcgcttta aaaaaatcgg acttttaggt tttaacccac
     2701 atgcaggaga ttatggagtg ataggaggca aagaagaaga gcttatgcaa aaggctatcg
     2761 cttttgttaa tgctttttta aattctaaaa aagatgaaaa attctttaaa aaagctctaa
     2821 aagatgaaaa attacaaaaa gaattgcttt taaattttaa tacaaaaggt gtttatttgc
     2881 cctacccttt agtcgcagat acagctttta caaaatcaaa tttaaaagca tgcaatcgct
     2941 taatagccat gtatcacgat cttggcttag cacccctaaa ggctttgtat tttgaaaaaa
     3001 gtatcaatgt gagtttaaat ttgcccatta tacgcgtaag tgttgatcat ggcaccgcct
     3061 ttgataaggc ctataaaaat gccaaaatca gtactaaaag ctattttgaa gcagctaaat
     3121 ttgctttaga attgccttct aaagcttcaa tctagcatta tcatcgatca agccctcttg
     3181 ggctagattg tctataaaaa tttccaaatc tataggatct tgaatgctca tttggattaa
     3241 attttcatat ctatctactt gattattaaa aatttgcttt aatctttctt tgctttgagt
     3301 atctttttta gctttttgca taagctctaa aaatacttta gcataagttt tttctataca
     3361 atcagtcttg taaacaaaag gcgattgagg atcttgatct gcttgcaaaa gatcgtttga
     3421 tataactttg gcacaatttt ttctttctct aaacattttt ttcacaacca atttaaaatc
     3481 ttcttttata atttcatttg cattttttaa aagctcttga tataaactta taaagatatt
     3541 atccatcaaa gcaagttttt tattttcaaa ttcattaata gcgcctattt tattgcatat
     3601 gattaactca tcatcatttt tgccattatt tttaacctta gaacaatcaa aactcgctct
     3661 aacttcattt ttatatataa gctcatcaaa actcaagccc cataagctaa gaaaacttaa
     3721 aattgttagt aaaattatct tcattgcctc tccttatttt ttgttttatt gtaacaaaaa
     3781 tatttttaat ttttttaaaa aaatcaaaat acaaattttt aaccatcaca atacagattt
     3841 atttcaaaca aattaacaaa actgtgaaaa ctccttttac tttttgataa atgatcaaaa
     3901 attttctaaa aaattatcca aaatttctaa attggaataa aaattgctta tctaatttaa
     3961 aatcaaaaaa acaaaaggag gagaaaatgg tggtaaaaga tatccaaaca acttcaagct
     4021 ctatgtttag tgccacaacc aaggttaagg aaaaaagcac ttcagcagat gaatttcaag
     4081 ctactctaaa tgaagttaaa aacaaagaag aaaaagaaga caaaaagaca agttcaagtg
     4141 aatttactaa tgaagatctt gatcttagtg ctgttaaaga agattttaaa tcttatgctt
     4201 ggcaaaaaat gagagaagat caatacaaaa aaaatgaaga agatttactc aataaacttt
     4261 ttgcaaccat tgatgcggga aatactgcta aaatataaat ttaaaatttc attgcgagaa
     4321 tttttcaatt ctcgtataaa tttataaaac accaaaataa gacaatcaca aatctttcat
     4381 acaacaaaac acatttattt ttattaattt ctgttataat tttatgaaaa aaacaaagga
     4441 aaattatgat ttttatcgac gcttgcttta aaaaacctac accctataca cccgtttgga
     4501 tgatgcgtca agcaggaaga tatttgcctg aatatatgaa agttagacaa gaagcgggag
     4561 attttttatc cttatgtaaa gactacaaaa gagcttcgga ggtttcttta caacctgttg
     4621 atattttagg agttgatgcg gcgattatct tttcagacat tttagtagtc cctcttgaaa
     4681 tgggaatgaa tttacgcttt gaaaaaggcg aaggaccggt atttcaaaca cctatttcaa
     4741 ccttagaaga ccttaacaag ctagatgata aaaatgctta taaaaaacta aactatgttt
     4801 atgatgcttt aaaactaaca cgcgaaaaat taccgcttga taaagctttg ataggatttt
     4861 gtggcagtcc ttggactata gcaacttata tgatagaagg aagcggaagt aaaaattatg
     4921 caaaatgtaa aaaaatgctt tatcaaaatc cagaactttt gcatgaaatt ttaaataaac
     4981 tcactcaagt tttaaaatct tacttagaag aacaaatcaa agcaggtgca aatgcggtgc
     5041 aaatttttga tagctgggcg agtgctttag aatgtgataa attctttgat ttttcattta
     5101 agtatatgct tgaaatttct gattttatta aaaacaaata ccctcacata cctgtaattt
     5161 tatttcctaa aggcattagt ggctatttgg ataaaatcga tggaaatttt gatgtttttg
     5221 gagttgattg gagtactcct cttgatttag cacgcgataa attatcccac caatacaccc
     5281 tacaaggcaa tatggaacct tgcagacttt atgataaaaa agctatcaaa caaggcgtag
     5341 aaaatattct tgaaattatg caaaataaag ctcatatttt caatctaggt catggaatct
     5401 tgcctgacat tcctgttgaa aatgcaaaat actttatcca gcttgtgcaa gaaagttcag
     5461 ccaaatgaaa attctctttg gccccatcaa ttcaagacgt tttggaagat ctttaggtat
     5521 tgatctaagc cctagcaaga aacaatgcaa ttttgattgc gtatattgcg aacttgaggc
     5581 tcaaaaacct caagaaaaac aagatgagat tgtaagcgta gaagaaatca ttttagaagt
     5641 tcaaggcgct cttgaaaaaa atgtcccatt tgactttctt accttaacag ccaatgggga
     5701 accaagcctt tatcctcatt tagatgaatt gatctcatcc ttacgcaaga ttgctaaaga
     5761 taaaaaattg ctcattttaa gcaatggcac cgtggtttta gatcaagaca aattcaatac
     5821 cttattaaag ttagatgtgg ttaaatttag cctagacagt gctatttcta aaacctttta
     5881 ccgtattgat agggctttaa aaaatattaa cttagaaaaa atgatagaaa aaatggcaga
     5941 atttaaaacc caatttaaag gtgatcttgt aatggagatc cttgtcgtaa aagatcttaa
     6001 tgacaatgaa gaagaattta tcgctttaaa tcaagcttta gctaaaatag cacccttaag
     6061 agttgattta agcaccattg atagaccccc agcttatgcg gttaaaaaaa taagcgaaga
     6121 aagacttttg gaactttcca aactcataac ttccactccc gtgcttttgc ccaaaagaca
     6181 ctatgagggt gaaaagttaa attttaatga agaagaattg ctaaaaatgc ttcatctacg
     6241 ctcacaaagt gagatagata tagaaaataa attagataaa acttctcaac ttcttttaga
     6301 caagcttata aaagaagaaa aaataaagat tcttaatcta gcaggagtta aattctataa
     6361 agcctaattt ttaggcaaat attttctaat caaagctata agatcatttc tgctgatatc
     6421 atttaaaacc tcgcttacgc aatcaaaatc cctcaccctc tccctagaaa agaatataat
     6481 atgactttga gggtgttgct ttttataagc gctaagaata gaacgcatct gctcaagatc
     6541 aaatttaatc aattcataat caagcaatat caaacgataa gcttcttttt ttaattcttt
     6601 tttcaattca ctaaaagaat tcacgcgcat attttgggag cattgttttt ctatgatatt
     6661 aaaaaacaaa gttgcatcaa actcattttg tttaaaaagc aaaacattat tttgataagg
     6721 agtttgaaat tttaaagcac aaattttatc aagttttctt tgcaaaatat tttcaagctc
     6781 ttttttttca aaaggtaggc ttaaaaaata ctcataatat aagtttttac tacgcccaaa
     6841 cacgataaaa tcatcagctt tcttagaact ttgctctaaa attttatcct taatgaaaac
     6901 cacatgaaaa tcattgatat caaaactcaa actcttaaaa atagtatttt ctatgccaaa
     6961 ataagacaac aaatttgcta gcaaaaatgc ttcaagccca tcatcactta ctatcgcagc
     7021 acttgcttca aattgcaaaa cattgccctg tgccacccct atgcttttat ggtattctaa
     7081 agcttgatta agtccaagtc taatttgttc tttttgatgt tttaatgcat ttaaaacaag
     7141 tgatttgatt tccttgcttg cttcttcttc atctaaacat cttacaacgc cctcaatatt
     7201 gccaatttga tacaaactat cctctagcaa ttttgcataa gtttcttttt catgagaaat
     7261 cttaaataaa tcttgattta aatgtgctat tttttcccga atcaaatcca aactcgtttc
     7321 gatatctatc tcttcagcat gtataaattc atttttaatt aataaaattt tttgatcttt
     7381 cctagccaaa gctcgttttt ttcgaaaaag gaaaaatatt aaagttaaag acaaaataaa
     7441 aatactagca aaaaaagtaa gtttaatttg ctcaaggctt tcatgaattc ttgtaaaatc
     7501 tatacttaaa aaagccaaaa taatattaaa aataaaaata atccaaacca ataacaaatc
     7561 aatcttcctt tattttttgt gctgattttt ttcctactaa ttggcacaat tcttcaaaat
     7621 ttgcctcata aatagcttca aaacttccat aatacgccaa aagtttttgt ataactcccg
     7681 cactaagtcc tgattttaca agcttagagc ttgataaatc ttgttttttc ttagtgtttt
     7741 gatgaaaact tatggcaaaa cgatgtgctt catctcttaa tttctgtaag aattgtaatt
     7801 ttttatcgtt aatgcttagg gcaaattctc cttttaaaga gtgaatttta tctttagccc
     7861 ctcctttagc gcggtgagct ttagcattga ttttttcttt tgagattgct aaaatatcaa
     7921 catttgcccc actacttaag atgatttctt tagctaaatc aagcaaagcc tttcccccat
     7981 ctataagcca caaatcagga gcaggcattt tgtcaaattc taatgctcta cgcgttaaaa
     8041 cttcacgcat ttgctcataa tcatttttgt attttaaatg aaattttcta taatttgact
     8101 tatcccaagt acccatttta taagttatca tagctcctac attcgccaca ccttgcaaat
     8161 gagaattatc aaaaacttct atacaatttg gcagattttc aagctcgaaa taatttttaa
     8221 gttctttttg tatattaaaa tcactatttt tttgctcttt ttgtatattt aaacacgcat
     8281 tttgaaatgc caaatcacaa attcttcttt tttcccctat tttaggaact ttaatgctga
     8341 tttttttatc aaatctctgg cttaaaattt cttctaaaag ctccctgtct tcaaaatcct
     8401 cataaacata aacagtattt gcaaccaaag gaatgtctac gctaaaattt tctaaaataa
     8461 gctgtttata aatctcattt ttatcaaaat ctgtattgtt tttaagcgga gtgattttag
     8521 aattagcgct gatgattttt ccattttgca ccacaaaacg caaagttgaa agcatagagc
     8581 tttcacaagc taaagcaaaa atttcaaagt cttctaattt agcgatatca atctcaactt
     8641 taatttccaa atcccttatc gtagcaatct gatctcttat ttttgccgct tcttcataat
     8701 tctcattttg ggctaaatga aacatttgtt tttccaaatt tttcactaaa atactagggc
     8761 ttaaaagagc attgatagct ttatctaaaa tcaaacgata ttcttcttgg gtaatttttt
     8821 tatcacaagg cgcaagacaa cgagaaattt gataaaaaat acaaggagat ttacaacttg
     8881 ctttttgctt taaaggatag tataaataaa gcgcatctaa aagctctcta gctcctttaa
     8941 aaaaggggcc aaaatatttg attttacttt ttttaactaa ttttctagtg atttcaaaac
     9001 gcggaaattc ttcattaaaa tctacataaa tataaggata agtcttatca tctcttagta
     9061 aaatattgta ttttggatga agttgcttga taaaagaatt ttccaaaatc aaagcatcag
     9121 cttctgaatt tgttgtaata aattccaaat gcaccgcttc ttctatcatt ttttgaattc
     9181 ttaaagaatt ttttggattg gcgcgtaaat ttggggtaaa agcaaaataa gatcttacgc
     9241 ggtttttaag atttttagcc ttgcctacat ataaaagctt tccttcggca ttaaaatact
     9301 gatacactcc agcatttgca ggtagggttt gaagctcttc tttgagagta tttttaagta
     9361 aaatttcagc catttcttat catctgcctt atttcttcaa atttctttgc taaaatttta
     9421 ttttcaaatt tattttcaaa ttttccaagg cttaattcta tatagggttt tttagccgtg
     9481 aaattttcat tattttttat tgtattattg tatttttgtg taaaaatttt taaatctttt
     9541 atatctgaaa atccactcaa aggatacatt tttccgtatt tttttatgag aactttaata
     9601 taaattttgc tattatcgtg atttaattct tggtaagcgg ctgaatttaa agtcactata
     9661 tttaaaatat gattttttat ataaattcta gcgattaaac gctgtttggc aggcggaaaa
     9721 gaatttaaaa aatctttaca aaaaaataag gtttttaagg gtcgataatg agacttactc
     9781 atcaagtcat taagaatggc gctagtattt ttaattatct ttggactttg aaatttttcc
     9841 ataagatgat tttagcattt tttttcttaa tttttttgtg tgcatgtggc tataagggca
     9901 acccacaata cactagctac gaacaaaatg gttcaataaa aagcattaaa aaatacgaac
     9961 aattaaatag gtggtagaat gaaaaaagca gatattttag ttttagattt tggatcgcaa
    10021 tatactcagc ttatagcaag aagattgaga gagcaaggcg tttatgctga gattttgcct
    10081 tttaatgtaa gtttagcaga tatcaaagcg aaagaaccta agggtattat tttaagtggt
    10141 ggccctgcaa gtgtttatgc aacagatgcg tacttttgtg ataaagaggt ttttaatcta
    10201 ggcttaccca tacttggaat ttgttatggt atgcaactca tggctcatca ttataaagcc
    10261 aatgttgctc cagcaggaca caaagaatac ggcaaagcaa gtatagaaat tcaaaaagat
    10321 agcgatttgt ttaaaaatct acctaaaaaa caaatcgttt ggatgagtca ttctgataag
    10381 gttgaaaatt taccacaagg ttttgaagtt ttagcaacaa gtgaaaatag tccgtattgt
    10441 gtttttgcaa atgaagagaa aaaattcttt gccttgcaat ttcaccctga agtacaacac
    10501 agtgaatttg gcaaaagcat cttgaaaaat tttgcaaaat atgcttgcaa ttgcgaaagt
    10561 atttggaata tgggatcttt tgcaaaaact caagctgaaa aaattcgcga agaagtgggc
    10621 aaagataaag ttctttgtgc tgtaagcggc ggggtagata gcagtgtcgt agcagcctta
    10681 ctagcaaatg caatcaaaga tcaagttata gtagtttttg tagataatgg acttttaaga
    10741 agtgacgaaa aagaacaagt tgaatttatg tttaaaaaca ctttagggat taatcttata
    10801 agcattgatg caagcaagat tttcctagat cgcttagcag gagttactga tcctgagcaa
    10861 aaacgcaaaa tcataggcaa tacctttata gaaatttttg aagaagaagc taaaaaacac
    10921 aaagatgtga aatttttagc tcaaggcaca ctttatactg atatcataga aagttcggtt
    10981 ataggtgcaa gcaaaactat caaaagccac cacaatgtag gtggattgcc tgaaaagatg
    11041 aatcttaaac ttgttgagcc attaaaagaa atttttaaag acgaagtgcg tgctttaggt
    11101 atcgagcttg gattaagcaa agaaatagtt tatcgccatc ctttcccagg ccctggtctt
    11161 gctatacgca tcatgggaga agtcaatcgc ccaagtcttg aattactacg caaagcagat
    11221 gtaatcttac ttgaagaact aagaagcaca ggttggtata ataaaacttg gcaagctttt
    11281 tgtgtattgt taaatgtaaa aagcgttggt gttatgggag ataaccgaac ttatgataat
    11341 accatttgtg ttcgtgttgt tgatgcaagt gatggaatga cagcgacttt ttcacacata
    11401 ccttatgaaa ttttagaaaa tatctcgcgt cgtattatca atgaggttga aggtattaac
    11461 cgcgtagttt atgatatctc aagtaaacca cctgcaacta tagaatggga ataaattaaa
    11521 aaatctgaaa acctgataat aatatacagg ttttcaagaa tttaaaaccc tcattaacaa
    11581 atttttaata cataaaaaac tagcatataa agtcatagaa aaagcttata ttaaatgtat
    11641 taattttatt ataaaaatca aagagtgtta aaatttttag gaatatggat ggaaaatagt
    11701 ataaaagatt catacaataa aatttgtaaa aagtggagtg aatttcgcaa aaatacctca
    11761 atcaatcaat gcattgtcga cttcgcaaat aatttaagtc caaattcaag agtgctagat
    11821 attggttgtg gaactggata tcctatcgct ttatatttat caaaacaagg atttcaagtt
    11881 acagggatag atatttcaga agaaatgata aaacaagcac aaaaacttaa cttacataat
    11941 gccacttttt tagtagagga tattttaaat ttcaaaacag ataaaaaata tgatgcaatc
    12001 atcgcatttg attctatttg gcacattagg tatgataaac aagaatgtat ttatcaaatc
    12061 atttcttctt tgttgacatc tggtggattg tttttattta ctcatggaaa aaatgatggc
    12121 gaaattataa gcacaatgtg gaaagaatca ttttatcata gtgctttaga tttagaaaaa
    12181 gtacataaat tattaaagca aaacggattt gatatcttat cttccataga agattatata
    12241 gaagaaacta cgggtgatcg agaattgctc attattgcta aaaagaaaga attataatat
    12301 agctttattt aaaattatca agctttaatc caaaaatttt acaatgcgtg cttattttta
    12361 ggacaatccg tgtaataaag cattaagttg tgttttatca aaaaaatggg gataaaaatt
    12421 tacttcttac aataatacac cacagcgggt gggaaatttt gccaaacaac ttttgaaatt
    12481 ctcacctctg taaaaagaga aaatatcttt tgacgaaatt ttaaacttga ataagtaggt
    12541 agcacataag caaaggtgct aaaatatccg ttaggtttta aacttttatg gatgattttt
    12601 aaaagctttt cttgctcgtg atccctaagc aaactccacg gaattccact tataatcaca
    12661 tctgcatagg tgatatttct ttgccttaaa aaataaggta aattttcagc actccctatt
    12721 tctatatcca aatttacaat ttttctttta agcttatctg ccatattttt attgatttct
    12781 atagcaaaaa attgtgcttt tttattttta tattttaaaa tattttcagt aaaaacacct
    12841 gtgccaggtc caatctctac gatatagttt gcttgacgca aattaatatt ttgagtcata
    12901 acaaaaccta gcttttgaga gctagaacaa aaagcaccga tttgttttgg atttttaaga
    12961 tattcataaa aaaacattca atttttccta tggtaaaaaa aatataacta aaaagaattt
    13021 taaaatcaaa catgtaattt tattcttttg cttataaaat ttttataaaa ataaagctaa
    13081 aattatcttt taaaaacttt caaggatgaa atatgcatgg aaaaatagct atatatatgg
    13141 attccacagg gcgtggaact gtaacgaatt cagcaaatac tttttttgac tttagtcgtc
    13201 aaatttggaa tgataaaaaa agtatgccaa gtgttgggat gcttgttgaa tttcgcacgc
    13261 tctctagtga taaaaagtct gaaaacggcg ctcctgtgcc tgtaagcaaa actatcacag
    13321 ggataaaacc ttccaaattt caagaattta aagagggtga ttttatcact gaacatgatt
    13381 tttggaaaac caatagtgat gatgagcttg aagatttaca aaattctcgc agaagtgcgt
    13441 atattacaga actttataga agcattgatt ttgattctat agaaaaaatt cccttatctt
    13501 ttactattcc tcaagccata caaaaatatt ttgcccatga aattttatct gttgaagcct
    13561 tgcaagccaa tttacaagat gaaaaagata ttccttgtat tttggactat ctcattctta
    13621 agagattttt atttaaagct tatgatactt taatttttat ggataatagt atagatcaaa
    13681 cccaatttag cgccctaaaa agcattatga tgcacttaga aaattcttac aaacaaatga
    13741 tagcagataa aaaacccaat atcactaaaa tatttaatga aactttctta tctttacaat
    13801 gccattacca agctttaata gccactatag atacaagaaa aaaccgcctt gcttcacttg
    13861 aagcacaaat gaaagcttta caatctgaaa ttcaacttaa aagcaatgcg gccaatgcag
    13921 atcctgaaaa actcaaagca agacaagaaa aattagcaaa acttcaaaaa gaagcggagt
    13981 attatagaac aacccttaaa agactgggtg ctatacaaga ggatttttat aagaaaaatt
    14041 ataatatttt tgaaaatgct ttcaagcttt cacgcgaaaa actctttaaa aaaataatta
    14101 caggtcttaa tttatgtgct acgataatgg atgttaaaat ttggcacctg tccttaaaat
    14161 catcaggggt taaaaattct tattttacta tgagtaatat agaaaattct ttctgttctc
    14221 tttcttttgc agaacattac ttaagtcgct taaataaatc cgctctaaat ccttttgatc
    14281 aaaaactttt agtttatatc caaaaaatta ccaaagaaca aagaaaaaaa tttttagtcg
    14341 tgacttcgga tttggatttg ctttgtaaat taaaaataga aacctttgcg caaaatcctt
    14401 atttcatagt aaagtacgcc cctaaaaaag tcaattatca gtctttaatg cgtgataata
    14461 gttttgatat agtgtttatc gatgaaaaac atgtatggga aagtgtagca gatattattt
    14521 tagaaggaaa acattttgat aaaataggaa aaaccaaatt taaactgatt taaacataga
    14581 attttaagct aaataaggct ataatttgct tgcctaaaca gttcgtgata tttaaagtga
    14641 tccaacatat ttttattaac tgtgattgtg cgatttaccg tgttctgtgg cgtcgtttga
    14701 gtttcgaaag aagcgagaag ttacagcctt taaaaatcgc ctaacggttt tctttgactt
    14761 tttggggtca atctttatta agcggctgtt tgggttttat acaaggagaa taaatgaaaa
    14821 taatgatttt gggtagcggt gctcgtgaat attctatcgc tttagcgcta aagcgtgtgg
    14881 atgaaaattt agaattttac tttgctcctg gtaatggtgc taccgaaagt cttggaacca
    14941 atctcaattt taaagatcct gtagttttag ccacttatgc aaaagaaaaa gaatttgatc
    15001 tatgcatagt gggtagtgaa agttttttag ctgaaggcgt tgtagatatt tttaaacaac
    15061 acaatattcc tatttttgga cctacaaaag ctgcagctat gcttgaaact tctaaatctt
    15121 ttatgaaaag ctttttaaaa aaatatcgta ttaaaacagc aaaattttta aacacaaatg
    15181 acatagaaaa agcaaaaaac tttatattaa gcttaactcc tcctatagtc gttaaagccg
    15241 atgggctttg tgctggcaaa ggagtaatta tcgcaaaaac tcacgaagaa gccatagaag
    15301 aggcttctaa aatgctaagt ggagaaagct ttggagaagc gggtaaactt atcgttgtgg
    15361 aagaattttt agatggcttt gagcttagta tttttgcggt atgtgatggc aatgactttg
    15421 tgcttttacc tgctgcacaa gatcataaaa aacttttaga tggggataaa ggaccaaata
    15481 cgggtggtat gggagcttat gctccgagtt ctttagctaa tgaaagcttg cttagaaaaa
    15541 tacaaaaaga tatcattatc ccaactcttg caggtatgaa aaaagaaggc agtgaatttt
    15601 gcggggtatt gtttataggt attatggttg taggcaataa gccttatgtc ttggaattta
    15661 atgtgcgctt tggtgatcct gaatgtgaag ttttaatgcc tttgattgaa aatcctttag
    15721 aacttatttt agccactaca caaaagcgtt taagacacac caagataaaa attaaaaaag
    15781 attatgcagt gggcgtagta tgcgcgagtg aaaactatcc ttacaaaagc tctccaaaaa
    15841 gtgaaatttc tataacaaat attcctgaaa atacacatat ttcttatgct ggagtaagtt
    15901 tagaagatgg taaacttatg gcagatggtg ggcgtgtatt ggtttgcgtt ggtacaggct
    15961 caagcataga agaggcacag aaaaaagctt acgagctttg tgaaaatgtt cattttaaag
    16021 gcaagcaatt tagaaaagat atcgctcatc aggttattca atgaaagaag atttacttac
    16081 gcgtcttgag cgagaaaatc ttaccattgc tagtttcaat aaaaggatat tggcatattt
    16141 tatcgataat cttgtacttt cgctgattgt atttgttatt ttttatgata aattacttaa
    16201 tgctaaggat ttatttgata cagctcaaat tttgggcgat ttttacttag gatttttatt
    16261 gcttcatatt acttaccaaa caatttttac ttatttatat ggggcaagtt taggaaaaat
    16321 ggtatgcaaa atcattattt tagatgaaga cttattagac aaacccaatt taaaccaaag
    16381 ctgcatacgc tcaatcgtta ggcaaataag cgatatggca tttatgttgg gctttgcttg
    16441 ggctttaagc aatgatttac gcaaaacttg ggaagattat ctagcaagga caatagtagt
    16501 taatgtggcg taaaatttta tttttaagcg ctagtcttac tttacttaac gccactcaag
    16561 ttgatatcta tgcacttgat gctaaaaaac aaggggatat actcactgca aacgatgatg
    16621 tgattatttt ttcagatttt tattttatca ctgccaataa ggctatttac aatgaaaaaa
    16681 ccggagattt agagcttttt ggtgatgtga atatattaag aggacaaaat gaacgctctc
    16741 attcaaacta tgctaaaatc aatttaaatt caaatgaggc taattttaat aattttttct
    16801 tttctaataa taatttagaa gtatggtttc aaagcaagac aagctattta gatgagaatg
    16861 ttttcaaaag cgaaatttca gctgtttcaa gttgtaatgt cgaagatcct gattgggaaa
    16921 ttcgcttttc taaaggatgg ctcaataggg aaaataattt tgtccattta tataatgcaa
    16981 aattatatgt taaagatttt cctatatttt atttacccta ttttggtttt agtgcagata
    17041 cccaccgcca aagcggactt ttaatcccaa aaatagtctt aaaaaacagc gaaggtttgt
    17101 attatgaaca gcctatttat atcgcacctt atgaaaattg ggatctagaa ttaaatcctc
    17161 aaattagaac cgatcgtggt tttgggcttt actcaacctt aagatttatc gactctcctt
    17221 attctatagg agaggtaaat ttaggagctt ttagagaaaa ttcatcctat tatcatgatg
    17281 aaaatttaaa aaaccaaagt cattacggcg cagaattaaa atatgctaga aatgatttaa
    17341 ttaaaaccct gttgggcgat aattttcaag aaggcttatg gatagatgct acctatctta
    17401 atgatataga ttatcttaat cttggcagca gggattatcg tgatttaaat tcattagtta
    17461 cttcaaaaat caattatttt ctagcggatg aaaataatta ttatggagct tatgcaaagt
    17521 attatatcga tacttctgca ttaaataacg ataatacctt acaagaatat ccaagctttc
    17581 aatatcatcg ttttttgaat aatttttttg atgaacgctt gcgttattct tttgatgcat
    17641 cttttcataa tttttatcgc cctgtaggcc cttatgcaaa tcaattgaat ttaaatttgc
    17701 ctatttctta tcataatgct ttttttgatg acttcttgca ttttactttt accgaacgct
    17761 tttatgcttc atttttaaac tatagtcatt atcctcaaaa agatcatgag cattatttta
    17821 gaaatacgca cgattttaat ctttatactg atttatctaa agcatatgat aatttttttc
    17881 atactcttaa ttttgggtta aaatatgttc ttccaggagc caaatcagga agtatttcag
    17941 aagattatct tgaagaaatt gacaaagaag aggaacatct tggcttttat actactcaat
    18001 acttttacaa taatgaaggt caaaaaaaaa tcaaacatag aattaatatt gattatttaa
    18061 acaagcaagg tgagtttgat gagataagca atttattaag ctattattat aataacaata
    18121 tcagttttaa tagtgagatt atttactctg atcttcaaga tcgttttaca aatatcatca
    18181 gtcaaatgga gatcaatcct aaccctaaat tcaattggag tttttcgcat gcttatcaaa
    18241 acgatgagta tggaaaatat agttttatag gcacgcgcgc aaattacctt gcaaatgcaa
    18301 attatcattt gtttggagga atttggtttg atacccaaag agcgcatgct aatatgtggg
    18361 agcttggata tacttttcaa cgcaaatgtt ggaattattc tttaatgtat agagaaagaa
    18421 ttgatccgca acttacaagt gcgggaatta ctgctaaaaa tcaaagcggt atttatttta
    18481 tttttaactt ctatccttta ggtggagtta aatacgattt ttctttagca gaaacggaga
    18541 gtaaaattta aaattaagga atgagatttg ctaaatattt ttaaaagttt gacaaattta
    18601 ttatatggaa aaaaaggaca aatgatgcaa tacagtatag aaatcaatgg caatttagaa
    18661 gtattcgata tagaaaaagt agctaaacaa gctgcaggtg ctgtgcttat gcgacaagga
    18721 aaaagtgtcg ttttagccgc ggttgcaaga gaggaaaagc ctgttgaaga agactttttg
    18781 cctctaactg ttcagtatat agaaaaagcc tatgcagcag gaaaaatccc gggcggctat
    18841 gttaaaagag aaaccaaacc aagcgatgca gaaactttaa ctgcacgcat tatagacaga
    18901 agtttgcgtc cactttttcc aaaaggatat gcctacccga cacaaattgt cgtaatggtt
    18961 ctttctgctg atcctcaagt agatcttcaa gttatgagtc taaatgcagc aagcgtagca
    19021 ctttatctta gtgatattcc tatgaaagct cctgtttgtg gagttcgcat aggtcgcata
    19081 gaagaaaaat ttgtcctaaa tccaaacaat gaagaactta aaaatagcac ccttgatctt
    19141 tatgtagcag gggttaaaga tgagctttta atgatagaaa tgcgtgcttt acctaatcaa
    19201 aaagaagatg aaatctttat cgaagctcct tatgcagatg ttttaaccca aacaacttca
    19261 caaagcatga atgaacttag cgaagatgaa attttagaag cgctaagtct agcccaaaaa
    19321 gctatattaa atggctctaa tgcttatgaa gaagcttttt tgaaacataa aaaatcaagc
    19381 gatttaaatt tcaaagatga aatagaaaat ttcgaacttc tcgcctttat agaaaataat
    19441 tttcacgatc aaatcgtaca ggctatcaat caaatggcaa aaagtgaaag agcgagtgag
    19501 ttaaataaaa ttgctgaaaa aatattaaat tttgaaagcg cgacaaaatg ggatgaagaa
    19561 agtattttaa atgccctagc aaaagtcaaa cataaaatcg ttcgtagcca aattttaaat
    19621 acaaaaaaaa gagcagatgg tagaaattta aatgaagtgc gtcctattgc catagaaaca
    19681 aatattttac ctaatgcaca tggctcttgc ctttttacac gcggacaaac tcaagctttg
    19741 gttgtggcga ctttaggtag tgaaaatgat gcgcaaatgg ttgatgtgtt aaccgaaaaa
    19801 aatcctatca atgaacgctt tatggttaat tataattttc caggtttttc agtaggcgag
    19861 gcaagcccta tcaaagcacc tggaagaaga gagttaggac atggaaactt agccaaaaga
    19921 gccctttatc caagcataga tgaaaattat ccttatatta tccgtttggt aagtgaaatt
    19981 ttagaaagca atggctctag ttctatggca acggtttgtg gagggtcttt agccttaaga
    20041 gcagcgggag tacctagctt aaaacttgta gcaggagtag ctatggggct tatttttgaa
    20101 ggcgatcaat atgctatttt aactgatatc atgggcttag aagatcatga tggggatatg
    20161 gattttaaag tagcaggtag caaagacggt atcacagcct tacaaatgga tatcaaattg
    20221 ggcggtattg atcaaaaaat actcaaagaa gccttgtatc aagctaaaga aggtagaatt
    20281 catatcttaa atatcatgga agaagcactt aaggaaattg ttgttaatga agaggtattg
    20341 ccaaaactcg agcttttcaa tgttgatcct tcaaaaatag tcgatatcat aggtcaagct
    20401 ggaaaaacta tcaaagaaat tattgaaaaa tttggtgttt ctatagactt agatcgtgaa
    20461 aagggtgaag taaaaattgc gggcaatgaa aacgaacaaa ttaaagccgc aaaagattat
    20521 attatcaata tcacaagttc tcaaaaaaat aataaaaaag gctttaaaga aaaagatcta
    20581 tcaaactttg aaatcggcga agaatttgaa ggaaaagtca aaaaaatcac gaattttgga
    20641 gcctttatag aacttaaaaa tggaattgat ggcttgcttc ataattctaa aagtaaaaat
    20701 ctcaatttaa gtgaaaatca aattttaaaa gtaaaagtaa gtgagattaa aaatggcaaa
    20761 atctctgtgg atttatgcga gtgagtgagt ttttaactca tccttttaaa cccttttttg
    20821 ataaggattc taaaatttta attttaggat cttttccctc ggtaaaatca agagaagatg
    20881 gattttacta ccagcaccca agaaatcgtt tttggcctat actagaaaca ctttttgata
    20941 caagattaga aaatataaca aaacaacaag cgtttttaaa agaaaaaaat atcgccattt
    21001 gggatgtgct tcaaagctgt aagattaaaa attcagatga taaaaccata agttacgcaa
    21061 aggctaatga tttaaattta atcctttctc aagcacaaat ccaagctatt tttaccacag
    21121 ggaaaagtgc ttatcgattt tttactaaat ttcatcctca tttaaaagcc atagccctac
    21181 cctcaagctc tcctgcaaat ttaaattttt cttttgaaca acttttgcaa agctataaaa
    21241 taatcaaaaa ttttataaaa taatttttga ttacgtatgt aaaaaatacc caaaagcata
    21301 tataaaaata aaattatttc acaaaaaagt aatacatata aaaacacacc ttcgcatata
    21361 aaaaacataa atccaaaaaa ggcaaataaa aataaagcta aagttcctaa aaacaattta
    21421 gaaagatctt tagcacaaaa aatcatataa tttataaaaa aatcaaacat tttaagattt
    21481 atgacatcct tt
//
LOCUS       DBBXOW010000025        21319 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.026, whole genome shotgun sequence.
ACCESSION   DBBXOW010000025 DBBXOW010000000
VERSION     DBBXOW010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21319
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.026"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(114..1499)
                     /gene="fliI"
                     /locus_tag="ACJE1S_000889"
     CDS             complement(114..1499)
                     /gene="fliI"
                     /locus_tag="ACJE1S_000889"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030257 - type III protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0030254 - protein secretion by the type III
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HGG0806452.1"
                     /translation="MNLEKLRSKLGKENLSAVFGEITKISTTSIEIRGLKTGVGDIIK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAIAKKEFMQKFLGQNPEESFEFEETIRLLSQIDANVAPSAVQQNINMGS
                     SNATLPNPNLK"
     gene            complement(1499..2071)
                     /gene="folE"
                     /locus_tag="ACJE1S_000890"
     CDS             complement(1499..2071)
                     /gene="folE"
                     /locus_tag="ACJE1S_000890"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HGG0806453.1"
                     /translation="MQEKFKNCVKTMLEIMGENPTREGLVKTPNRVFKAYEFLTSGYK
                     KNVKEILNNALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRVHVAYIPDQKVVGLSKI
                     PRLVEVYARRLQIQEQLTEQIAEALMENVGAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGLFLKNEKTREEFFSLINSPKQVRF"
     gene            2192..3517
                     /gene="tig"
                     /locus_tag="ACJE1S_000891"
     CDS             2192..3517
                     /gene="tig"
                     /locus_tag="ACJE1S_000891"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HGG0806454.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKNVKMDGF
                     RPGKVPVAAVLKRYQKELTQDAEQNLFKSAVDSALKELKKEAKELVGEPYFEKFDRKD
                     GEIVAELALSFKPEFKLDGYEKLIPEYQTPKVTKKEIDEKKEELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDGKAFDGGKAENYVLEIGSKQFIPGFEEGMVGMKSGEEKDVK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKLPELDEGMLKNLLQNEEKPTVELLDEKL
                     KEQIKNEKLFKLVNDELKAKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFSDIFMPKTDKASKKEKEDK"
     gene            3517..4101
                     /gene="clpP"
                     /locus_tag="ACJE1S_000892"
     CDS             3517..4101
                     /gene="clpP"
                     /locus_tag="ACJE1S_000892"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HGG0806455.1"
                     /translation="MYIPYVIEKTSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPQKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGTEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKAILNDILAKNTKQK
                     VAKIVKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            4129..4656
                     /gene="def"
                     /locus_tag="ACJE1S_000893"
     CDS             4129..4656
                     /gene="def"
                     /locus_tag="ACJE1S_000893"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HGG0806456.1"
                     /translation="MVRKIITYPNSRLFLNSEPVKQFDQELHTLLDDMYDTMIASQGV
                     GLAAIQVDIPLRALIVNILDENEEQKKEDLLEIINPQIIPLGEEKITCTEGCLSVPDF
                     FEEVERYNHILLKYQDRFGNFKELEAQGFLAVAIQHENDHLNGHLFIEKISFLKRQKF
                     DKEFKKKLKNQKKSK"
     gene            4653..6158
                     /locus_tag="ACJE1S_000894"
     CDS             4653..6158
                     /locus_tag="ACJE1S_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HGG0806457.1"
                     /translation="MKKLKCVSFDENLDIIDVESTFTRGLPNLSIVGLANIAIKESIE
                     RIKATLLTCNFSFPAKKITINLSPSGIPKKGSHFDLVIATLILLQNEDFDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSTKVKSAKVVVPKNIALKASMIPNLEIYGLEHLNEVIEF
                     FKEKNYEKFKFTQSHPLFANPLIIENEIFIKNHHFELDFKDIKGQEKAKRACLIAALG
                     MHNILFEGSPGSGKSMCAKRLVEIMPPQSLNEVLMQNAYMSLNSKDCEFTQKRALRHP
                     HHTSTRASIFGGGAKNAKIGEIALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKTTYETKFSFVAAQNPCPCGNLFSKNLSCVCSENEIKRYKNHISAPIMDRIDLY
                     VAMDEISKDDKSSINSKEMSERILKAFIFGKKRGQKEFNGKLNDTELQKFCILEKDAK
                     DTLDLAISRYNLSQRALNKILKVSRSIADFEEKELLSKNHILEALSFRMRS"
     gene            6160..6858
                     /locus_tag="ACJE1S_000895"
     CDS             6160..6858
                     /locus_tag="ACJE1S_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HGG0806458.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEIIIKRIYGDWTQ
                     KNIQAWKEQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKDIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDQDENKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFNPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYENYY"
     gene            6842..8212
                     /locus_tag="ACJE1S_000896"
     CDS             6842..8212
                     /locus_tag="ACJE1S_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HGG0806459.1"
                     /translation="MKTITDDIKTLEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RKQYKIKKVKILFLLGGGNNAADGLVALRNLKHAKAYKLGFKENEIFKKQEQILKNFG
                     FKFAKKEPKFKKFHIIVDCILGTGTNREVDEKTKEILEKVNQSKALKIACDIPTNLGF
                     TPCFKADITQCMGALKEILLEDFAKEFVGKIKLANLGINAKKFSLDSKAFLLEEKDLK
                     TIERNTSSNKGNFGHIYIIASASAGTLAGLGALNFGSGLVSLVAKKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDILKDEILQNIPLVLDANCFLSEAVLWYLSRKDVVITPHPKE
                     FIRLYKMCFDEDLSIEDLQRNRFFYAKKFAQNYDCVLVLKGANPIIIQKEKIFVVNLG
                     NEALAKGGSGDVLSGMIATLLGVKFSALEAAKNACLAHALVAKKYKFNKNSFDAIKLI
                     KGLKCL"
     gene            8203..8778
                     /gene="purN"
                     /locus_tag="ACJE1S_000897"
     CDS             8203..8778
                     /gene="purN"
                     /locus_tag="ACJE1S_000897"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HGG0806460.1"
                     /translation="MLVKLAVLFSGNGSNLQNILEKLHKKTIGKNTYEVVLCLCNKKD
                     AYGIQRAKNFDLESVIIEHKDYKNREEFDEILVKKIKESGADLTILAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVNEELDGGKIIAQKAFEKQ
                     NLTFEEFEAKIHGLEHEILPLSVVEIFENCH"
     gene            complement(8916..9152)
                     /locus_tag="ACJE1S_000898"
     CDS             complement(8916..9152)
                     /locus_tag="ACJE1S_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806461.1"
                     /translation="MENGNLKVDEQYKVTLPPNLITVLEYDKKDFEGATLKNFIDDVE
                     CELSDWEIELYDDPHFMDMMKMRRDMKMMKMMKK"
     gene            complement(9318..10034)
                     /locus_tag="ACJE1S_000899"
     CDS             complement(9318..10034)
                     /locus_tag="ACJE1S_000899"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HGG0806462.1"
                     /translation="MRAARTCGANNNDFSILDYLFDEYGLSLKDPKYNFRFADMKYIK
                     EANDKYIVVRYMEDNPSIYKEALIYRYILKVRNPNPQIIQYLANHGAKFEVYREDTGW
                     SPIHFWASNNDYKFLELAIKGGANVDMEEYEFESIYKYQDTPLFEAVKESGNYRTVQL
                     LIELGANVNFVPYLTTPLDQAEGARNRKLLKAAGAMTSDQLEKKFNIFYKDYEDRNEY
                     CDLLNEAIRKDKEKENLQKN"
     gene            10175..10915
                     /locus_tag="ACJE1S_000900"
     CDS             10175..10915
                     /locus_tag="ACJE1S_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HGG0806463.1"
                     /translation="MFEWIFSAEMWIALATLIGLEIVLGIDNIIFIAILVGRLPKEKR
                     QRARIFGLSLAMITRLLLLLSLFWIMKLTTPLFSVFSQEISGRDIILILGGLFLIAKS
                     TLEIHHDIDNAGEKSDEEVLKEGAKRGFFSILIQIAVLDIVFSLDSVITAVGMVNNIE
                     IMMIAVVVAVFVMMLASKSISNFVDDNPTIKILALAFLILVGVTLVAEGLDFHISKTY
                     VYFAMAFSLGVESINIYIKKKRLAQEKS"
     gene            10965..11174
                     /locus_tag="ACJE1S_000901"
     CDS             10965..11174
                     /locus_tag="ACJE1S_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HGG0806464.1"
                     /translation="MPKDANGTELNAGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KENEIEAKVDKFGVIVLKTEFLKKI"
     gene            11183..12367
                     /locus_tag="ACJE1S_000902"
     CDS             11183..12367
                     /locus_tag="ACJE1S_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HGG0806465.1"
                     /translation="MRILLILRGNYYAGQEEFIKENRLKDYTLDLNSLRLLSGSVSKI
                     VSKYKNLNLKNDEELYKILLQFLEMRMQKGEFCIINAYNETLKVYKELAKQYRYDIYI
                     IDFKSSLEECLRKNEQKAKERGYIVSQSLLKKTHHLLERIPKKYTILNPNDWKKCLYQ
                     MPNLSKYRKIHHIGDIQGCFSILKEYLQELEDDECYIFLGDYIDRGIENGKVLKFLLK
                     ICERENVYLLEGNHERHLIKWANGELSSSKEFNENTLKDFRKEKLTPRDARKFYPYLK
                     ECLYYKFHEKQVFCSHGGVNLLPSKAYQISFMPSYDFIYGVGNYEESQKVASQFCEFT
                     KDNVYQIFGHRNRTKLPVQIEKRVFLCEGKVDDGGHLRIVTLDKKGFECIELKNKVYR
                     KK"
     gene            complement(12379..13740)
                     /locus_tag="ACJE1S_000903"
     CDS             complement(12379..13740)
                     /locus_tag="ACJE1S_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HGG0806466.1"
                     /translation="MDPSQVLDLNQTLPTASFDAGYSILMVVIALALVLLNGFFVLSE
                     FSIVKVRRSKLEEMVKEKKVGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAI
                     AKMLEIPLANLGFNGVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAIADKAVLWVA
                     RPLHWFWMLFLPCIKIFDFLAAMTLKLFGIKPAKESELTHSEEEIKIIASESQKGGVL
                     DEFETEIIRNAVDFSDTVAKEVMTPRKDMICLNKQKTYAENMQIICDHKHTRFPYIDG
                     SKDTILGMIHIRDIVQNELSDKSENLDTFVKPLILVPENISISKVLVMMNKERSHTAL
                     VIDEYGGTAGILTMEDIMEEIIGEIKSENEEDSYKKLAENIYEFQGRCDIETVEEMLL
                     ISYDEDLEQVTIGGYVFNLLGRLPVAGDRIEDELCYYEVKKMDGNSIERVKVVKKTNK
                     DEE"
     gene            13858..14985
                     /locus_tag="ACJE1S_000904"
     CDS             13858..14985
                     /locus_tag="ACJE1S_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0806467.1"
                     /translation="MLKILIIFCATLTLSIVYAPQPIAPLLSNYFHVNLHQISWIISV
                     TLIPLAIAPLVYGYLLEIFSLKKILVVSLFLCSIFGIIGNLNDNFYFFLFLRFLQALC
                     IPAILTALLTLLSRLESDNIQKNIAIYVGATTFGGFVGRVFGSFLSDLFSWHFALNFF
                     SILMMVCAFLFLFFKEHPISLNTQTSLRDFLPFIKELRFMVILFCVFTIFFSFQSIVS
                     FLPFHLKESIKDITQTQIGLVYLGFLTGVISSLLIGKTIEILGSKIRTAIFGFLVFIA
                     GCFCMIVGNFYFAFFAMFVFCSGMFISHCIFSGILNSIADKKGLANGIYLTFYYSGGA
                     LGSVLPSFYYESFGWEFLCIFTAFLLFIALIIFSKFRHFYK"
     gene            complement(14976..16196)
                     /locus_tag="ACJE1S_000905"
     CDS             complement(14976..16196)
                     /locus_tag="ACJE1S_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HGG0806468.1"
                     /translation="MFSSFFASKKWALWAYLGLFLLLFFLYMQTSLNVAINSWYSDFY
                     NVLQKPKIELLDSNTTQKAEEKFENNASLIQEANQKAQENFQKANFINKGALYYYQSL
                     LEYFFNSRAMIEKESYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMT
                     FSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIRALMTLVAFIPILWTLSD
                     VVSKALFANLSENSSFYFLKNIDGLLVYVALLISLGGLIVSWFVGIKLPGLEYNNQKA
                     EAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVI
                     VPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIHKRLKEFE
                     KNIEYAKNKNKNHL"
     gene            complement(16252..16998)
                     /locus_tag="ACJE1S_000906"
     CDS             complement(16252..16998)
                     /locus_tag="ACJE1S_000906"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HGG0806469.1"
                     /translation="MKSGMIFGLVSSLILHALVLMFFLFSFYTQEKSSGVDFKQGVEF
                     TSIMMVSELPIGELKEVSIDQKKSNSQDKNKKQDEKMSLNSQDKNAVLKAQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQIKSYQALLMAHLAK
                     FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAVLNDEVLSLFKRASPLP
                     KPPKEMLKDGEKISFVMPIDYNIKDYLGKK"
     gene            complement(17001..17411)
                     /locus_tag="ACJE1S_000907"
     CDS             complement(17001..17411)
                     /locus_tag="ACJE1S_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HGG0806470.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLANALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKVD"
     gene            complement(17398..18159)
                     /locus_tag="ACJE1S_000908"
     CDS             complement(17398..18159)
                     /locus_tag="ACJE1S_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HGG0806471.1"
                     /translation="MLKKIFLFCFLLLNLNAEVNVTDTNLSFDSPKIEAEVPKIELSL
                     SSLYQNADEVVKGVIYILVLFSVLAWAVFISKLMQFYFMKQNLDFSIHKIKELKNLNE
                     LDQTKGFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITASKNGLSLLASI
                     GASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLVAAIPAVLF
                     YNYLTRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            complement(18172..20448)
                     /locus_tag="ACJE1S_000909"
     CDS             complement(18172..20448)
                     /locus_tag="ACJE1S_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HGG0806472.1"
                     /translation="MKKLSLFCVMGLCFANFAFSEELEFDSLEISGSKIKNDEKPFVT
                     PGATSTRDNLNSNTQSIDSIVRSVPGAYTQVDQAQGGVSVNIRGMTGLGRVNTQIDGV
                     TQTFFGSASDDSFHGQIGTSSFTAPIDKNFLVALDVNRGTFSGANGANALMGSANFRT
                     IGVDDIVQEGRVFGFLGKYSYGSNAIGPNFMGAIAGKTMLENNANLGILFAYSGQNVS
                     QNYKIGGGGYIGDQKPPFDTDDDGIPDDNLAAPINPNNLYNQPRSQLFKVEYKSDISE
                     AILNYRAYKNNLAGRKITNDTYQIDYRLNPDSNLLDLKFLFAYNDGKQKYNQGSTWGY
                     HDMSGVKTKNRAVTFDLSNTMNKEFSQDSNLYFTYGVNILNNHYSNDFPQDRVLLPYI
                     LTSFYPKGKQDIKTLYLDTSFTKGIFTLNSNINWTNAQLSGYKGICSMANPYCQPKNA
                     TNLEKDYNNFNYSLMLSADIHPLFNPFISYSKSHRIPNVQEYFFTHDASFEHNMNTFL
                     KAESADTYQIGFNSFTHEILNDSDTLGFKMLYYDTKVKNYIYNRRYWQKADDAIFLMQ
                     LNDDEKAKFHGVELEFKYDTGFFYSILSYAYQKSKHKFSDTESLEFGGAQSGQSQFAQ
                     LPEHYANLDMGVRLFEEKLTLGALAKYTGKAKRIVPVGSLDDDPSNPDAMAPLKTTDE
                     LPKIPTIVDLYANYKILKNFTIKAEVQNLFDKNYMDALYSYNTGENQNAGGLFDPIYI
                     YNNSARGRTFIVSFEYKY"
     gene            complement(20458..21300)
                     /locus_tag="ACJE1S_000910"
     CDS             complement(20458..21300)
                     /locus_tag="ACJE1S_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HGG0806473.1"
                     /translation="MKFYTMLSTLFISFMLSACAVLQKSPPLQENKDFYILDTHTQKK
                     ISFEDMIVELLKADVILLGEKHDEAKHKISQVMIFNALEGNLSSQNISFDVALEMLAS
                     TEQNHLDKAFKNKKTIKTNELTNALNWDKGWKWKDYDQFVNAVFYSRAKILGANLSRS
                     EITSIYNGVQPLKGYVSTTNEVKKQIFDIISLSHKLNPQENKELLDKLVEIQQFKDRR
                     MADVLVHHTNKVLLLAGSYHTSKKIGIPLHIQDFKSDKKIVVVNLNYGERDLKDSDYT
                     FIYY"
BASE COUNT         7363 a         3348 c         3291 g         7317 t
ORIGIN      
        1 aaattgatgt gtaaaattta gattgatatg caagtatcaa tctaaagatt ttgatttgtt
       61 gatgaaattt acatttctat atttattgaa attattttta atacaaaaaa agattattta
      121 agattaggat taggtagtgt tgcgttagaa cttcccatat tgatattttg ctgcactgca
      181 ctaggggcaa cattagcatc aatttgactt aaaagtctta tagtttcttc aaattcaaag
      241 ctttcttcgg gattttgtcc taaaaatttt tgcataaatt cctttttagc tatagcttca
      301 tcaagctcct tatcactacc cttttgataa gcaccgatac gaagtaatac ttcattttct
      361 ttcaaaagcg aatttaagcg tttaaatttt ctagcccaaa gtttgtgttc aggacttatg
      421 atatcgccca ttacccttga ggctgaattt tgtatattaa taggaggata aattccaaaa
      481 tccgtaagct cacgacttaa aacaatatgc ccatctaaga tagaacgact ttgatcggcg
      541 ataggatcac tcatatcatc tccatcaacc aaaacagtaa aaaacgccgt tatggttcct
      601 ttaccttctt cttttcccgt tctttccatg agctgaggca aaagacttaa aacacttgga
      661 ggatagcctt ttgtagtagg aggttcgcca agggcaagtc ctatctctct ttgtgccatg
      721 gcaaaccgcg ttacgctatc catgataaaa agtacatctt tgccttgttc tttaaaatat
      781 tcggccacgc tcatagcgca aaatgctcca tattttcgca ttaaagcact atcatcactt
      841 gttgcaacga taattaccgt atcatcaagc tttccaccta aatttttttg tataaattca
      901 ggaatttcgc gccctctttc gcctataagt gcgactactt tgataggagc ttttgaattt
      961 ttaactatca tacccataag agtagatttt cctacgccac ttcctgcaaa aatgcctaat
     1021 ttttgcccca cgccacaagt taaaagcgcg tctatggttt taactcccac aggaaaaacc
     1081 tcttctataa gtcctctttt catcgcatca ataggtgcac gcatgatagg catatattta
     1141 gtcgcctcta tagcaccctt gccatcttta gggcgcataa aaggatccac cactcttcct
     1201 aaaagctcat cactaacgcc tatttgcatt cctgcatcac ttataaaagc gcggtcgcct
     1261 attttaaaac cttctatgaa agaaaaagga cttagatagc taaattgctc tttaatttca
     1321 acaaccatag ctaaggtgtt taaattttca ttttcatttg aaacaagttt aatgatgtca
     1381 cccacacccg ttttaagtcc tcgaatttct atacttgtag tagaaatttt agtgatctct
     1441 ccaaaaacag cacttaaatt ttctttgcca agcttagaac gaagtttttc taaattcatt
     1501 aaaaacgaac ttgcttagga gaattaatga gtgaaaaaaa ttcttcgcgt gttttttcat
     1561 tttttaaaaa aagtccacga agagccgaag tggtagtagt agaatttgct ttttgtaccc
     1621 cacgcatttc tacacacata tgtcttgctt ctataaccac accaacacct tttgcaccaa
     1681 cattttccat caaagcttca gcaatttgtt cggtaagttg ttcttgaatt tgaagtcttc
     1741 tcgcatatac ttctacaaga cgtggaattt tgctaagccc aaccactttt tggtcaggga
     1801 tataagccac atgcacgcgg ccaaaaaaag gtaaaagatg gtgctcgcaa agactgtaaa
     1861 attctatatc acgcactaga accatttcgt tatttgagct ttcaaataaa gcattattta
     1921 gtatttcctt gacatttttt ttatatccac ttgttaaaaa ctcataagct ttaaaaacac
     1981 gattaggcgt ctttacgagt ccttctctag ttggattttc ccccataatt tcaagcatag
     2041 tttttacgca atttttaaat ttttcttgca aattattctc cgtatttttt tcttggctca
     2101 ttttaacata aaatgcttta aaattttatg caactaataa ggaaaaattt gctatgatta
     2161 aagcaaattt tattttataa ggaaaaatgt tatggaagta aaagcaaagc aattagactc
     2221 tgttaatgcg actgctagtg taaaaattcc ttcagggatg attaaaagcg aagtagaaaa
     2281 tttagctaaa aaagcttcta aaaatgtaaa aatggacggc tttagaccag gaaaagttcc
     2341 tgttgctgct gtacttaaaa gatatcaaaa agaattgact caagatgcgg aacaaaatct
     2401 ttttaaatct gctgttgata gcgctttaaa agaattaaaa aaagaagcaa aagaacttgt
     2461 aggtgagcca tattttgaaa aatttgatcg taaagatgga gaaattgttg ctgaattagc
     2521 tctttctttt aagcctgaat ttaaactcga tggctatgaa aaattgattc ctgagtatca
     2581 aactccaaaa gtaactaaaa aagaaatcga tgagaaaaaa gaagaattat taaaacgctt
     2641 tgctactcct gaagctatta aaaccaaaag agctttaaaa gaaggtgatt ttgcaaaatt
     2701 tgattttgag ggttttgtag atgggaaagc ttttgatgga ggtaaagctg aaaattatgt
     2761 tttagaaata ggttctaaac aattcatacc aggttttgaa gaaggtatgg taggaatgaa
     2821 aagcggagaa gaaaaagatg taaaagtaac ttttcctaaa gaatacggcg cagcacattt
     2881 agcaggaaaa gatgcggtat ttaaagtaaa attgcacgaa attcaagaat taaaattgcc
     2941 tgagctcgat gaaggaatgt taaaaaatct tttacaaaat gaagaaaaac caacagttga
     3001 acttttggat gaaaaactta aagagcaaat caaaaacgaa aaacttttca agcttgtaaa
     3061 tgatgagcta aaagctaaat ttgctgatgc tttgattgaa aaatataatt ttgatttacc
     3121 taaaggcata gtagaacaag aaactgatat gcagatgcgt gcggctttta atacttttag
     3181 cgaaaaagaa attgaagaac ttaaagcaag taaagaaaaa tatcaagaaa aacgcgattc
     3241 tttcaaagaa gaagcgcaaa aaagcgtaaa acttactttt atcattgatg agcttgcaaa
     3301 acttcgtaag attgaagtaa atgatcaaga attgattcaa gcgatttatt ttgaagctta
     3361 tcgttatgga atgaatccaa aagaacattt agaaaattat aaaaaacaag gggctttacc
     3421 tgcagtaaaa atggctttga tcgaagaaaa acttttcagc gatattttta tgccaaaaac
     3481 cgataaagca agtaaaaaag agaaagaaga taaataatgt acatacctta tgtaatcgaa
     3541 aaaacaagcc gcggtgaaag aagttatgat atttattcgc gtcttttaaa agatagaatt
     3601 attatgctaa gtggcgaaat tcatgatgaa cttgccgctt ctatcgtagc acagcttctt
     3661 tttttagaag ctgaagatcc acaaaaagat atatatcttt atatcaattc tccaggtggt
     3721 gtgatcacaa gcggttttag tatctatgat actatgaatt atatcaagcc tgatgtttgt
     3781 acgatttgca taggtcaagc tgcatctatg ggtgcatttt tattgagttg tggaacagaa
     3841 ggcaagcgtt ttgctttgcc taattcacgc atcatgatac atcagccttt aggtggtgca
     3901 agaggacaag ctacggatat agaaattcaa gccaaagaaa ttttaagatt aaaagctata
     3961 cttaatgata tcttggcaaa aaatactaag caaaaagtcg ctaaaatagt aaaagacaca
     4021 gaaagagatt ttttcatgtc agcacaagaa gctaaagagt atggtttgat cgataaggtt
     4081 ttagaaaaaa gttttaaatg agtaaaatca tttaaataaa ggttgtttat ggttagaaaa
     4141 attatcactt atcctaattc tagacttttt ttaaattctg aacctgtaaa gcaatttgat
     4201 caagaacttc ataccctgct tgatgatatg tatgatacta tgattgctag tcaaggagtg
     4261 ggtttggctg ctatacaagt agatatccca cttcgtgcat tgatcgtaaa tattttagat
     4321 gaaaatgaag agcagaaaaa agaagactta ctagaaatta taaatccgca aatcattcct
     4381 ttaggtgaag aaaaaatcac ctgcactgag ggttgtttaa gcgtgcctga cttctttgaa
     4441 gaagtggagc gttataatca tatcttgctt aaatatcaag atcgctttgg aaattttaaa
     4501 gaattagaag ctcaaggatt tttagctgtg gccatccagc atgaaaatga tcatcttaat
     4561 ggtcatttat ttatagaaaa gatttctttt ttaaaaagac aaaaatttga taaagaattt
     4621 aaaaagaaac ttaaaaatca aaaaaaatct aaatgaaaaa attaaaatgt gtaagctttg
     4681 atgagaattt agatatcatc gatgtagagt ctacatttac aagaggctta cctaatttaa
     4741 gcatagtcgg acttgcaaat attgcaatta aagaaagtat cgagcgtatc aaagccacac
     4801 ttttaacttg caatttttca tttcctgcta aaaaaatcac catcaatctt agcccttcag
     4861 gaattccaaa aaaaggttct cattttgatt tagttatcgc tacgcttata ttgttgcaaa
     4921 atgaagactt tgatgatttt tttgtggtag gcgagcttgg tcttgatgga agtatcaaaa
     4981 gcaccaatga gcttttttct ttacttttat ttttatccac aaaggtaaaa agtgcaaaag
     5041 ttgtagtccc aaaaaatata gctctaaaag cttctatgat acccaatcta gaaatttatg
     5101 gacttgagca tttaaatgaa gtgattgaat tttttaaaga aaaaaactat gagaaattca
     5161 aattcaccca aagccatcct ttatttgcaa atcctttgat tatagaaaat gaaattttta
     5221 ttaaaaatca tcattttgaa cttgatttta aagatatcaa aggacaagaa aaagctaaaa
     5281 gagcttgttt gatagcagca ctaggtatgc acaatatact ttttgaagga agtccaggaa
     5341 gtggcaaaag tatgtgtgca aaacgccttg ttgaaatcat gcctccacaa agtttaaatg
     5401 aggttttaat gcaaaatgct tatatgtctt taaattctaa agattgcgaa tttacgcaaa
     5461 aaagagcctt aagacaccct catcatacct ctacaagagc tagtattttt ggtggtggag
     5521 caaaaaatgc gaagataggt gaaatcgctc tagctaatgg tggagtttta ttttttgatg
     5581 aatttcctca ttttaacaaa cagattatcg aaagtctaag agaacctcta gaagatcata
     5641 aaattcatat ttcaagagtc aattcaaaaa ccacttatga aaccaaattc agttttgttg
     5701 ccgctcaaaa tccttgtcct tgtggaaatt tattttctaa aaatctgtct tgcgtttgta
     5761 gtgaaaatga gattaaaagg tataaaaatc acatttcagc ccctattatg gatagaattg
     5821 atctttatgt agctatggat gagatcagca aagatgataa gtcaagtata aattcaaaag
     5881 aaatgagtga aagaatttta aaggctttta tctttggcaa aaaacgcggc caaaaagaat
     5941 ttaatggcaa attaaatgat acagaattgc aaaaattttg tattttagaa aaagatgcca
     6001 aggatacttt ggatttagcc atttcgcgtt ataatctttc acaaagagct ttaaataaaa
     6061 ttttaaaagt ttcaagatct attgcagatt ttgaagaaaa agaacttctt agtaaaaatc
     6121 atattttaga agctttgagt tttaggatga ggagttaaat tggaaaataa aagcatagct
     6181 atttttatcg atgcggaaaa tatacccgca aaatacgcaa aaagtatttt tgatatcgct
     6241 tcggattatg gtgaaataat tatcaagcgt atttatggag attggactca aaaaaatatt
     6301 caagcttgga aagagcaaat tgctgagtat tctttaatcg ctatgcagca gtttaatttc
     6361 gcagcaaata aaaattcaag tgatatgtat ttaatcactg aaattatgag tatattttat
     6421 gagaaagata ttgatatttt tgtcattgtt tctagcgata gtgactatac ctcgctcatt
     6481 caaaagctaa gagaaaacaa aaagcaagtt ataggaatgg gtcttgaaaa gtctataaaa
     6541 tcttatgtaa acgcttttag tgagtttttt taccttgatc aagatgaaaa caaaaaagaa
     6601 gatattttaa gcaaggatta tttaagagct ttgatcaata tcacagaaca actcatcgat
     6661 gaaaaaggac gcgccgaata cgcgcaaatt cgcaccaata tgaaccgcaa atattctgat
     6721 tttaatccgc aaaattatgg ctttaaaaat tttcgtgctt taattcagaa atttttaccc
     6781 aaaatgaaaa aatttgaaga agagcgagaa aaaaatattt attttctggt gaaaaaagat
     6841 tatgaaaact attactgatg atattaaaac tttagaacaa aatgctataa ataaaggctt
     6901 agatgagctt attttaatgg aaaacgcagg attaaattta gctaagctta ttaaaaaaga
     6961 agcaaaaaaa attcgcaaac aatacaagat aaagaaagta aaaatacttt ttttattggg
     7021 cggaggcaat aacgctgctg atggcctagt agctttaaga aatttaaagc atgcaaaagc
     7081 ttataaacta ggctttaaag aaaatgaaat ttttaaaaaa caagagcaaa ttttaaaaaa
     7141 ttttggtttt aaatttgcaa aaaaagagcc taaatttaaa aaatttcata ttattgttga
     7201 ttgtatctta ggcacaggaa caaaccgcga agtagatgaa aaaacaaaag aaattttaga
     7261 aaaggtaaat caaagtaaag ctttaaaaat agcttgtgac atacctacaa atttgggttt
     7321 tactccttgt tttaaagctg atatcacgca gtgtatggga gctttaaaag aaattttgct
     7381 tgaggatttt gctaaagaat ttgtaggcaa aatcaaactc gcaaacctag gtattaatgc
     7441 taaaaaattt agtcttgatt ccaaagcttt tttacttgaa gaaaaagatt taaaaaccat
     7501 agaaagaaat acaagctcca ataaaggaaa tttcggtcat atctatataa tagctagtgc
     7561 aagtgcagga accctagcag gacttggagc tttaaatttt ggcagtgggc ttgtatcctt
     7621 agtcgcaaaa aaaagttttt cacctctttt aatgctaaaa gaaaagattg aaaacaatgc
     7681 aagtgccatt gccttaggta tgggacttga aaatttagat attttaaaag atgagatttt
     7741 gcaaaatatt cctttggttt tggatgcaaa ttgcttttta agtgaagctg tgctttggta
     7801 tctaagtaga aaagatgtag tcatcacccc acatccaaaa gaatttataa gactttataa
     7861 aatgtgtttt gatgaggatt taagtataga agatttgcaa agaaatcgct ttttttatgc
     7921 taaaaaattt gcacaaaatt atgattgtgt tcttgtttta aagggtgcaa atcctatcat
     7981 catacaaaaa gaaaaaatct ttgttgtaaa tctgggaaat gaagctttag caaaaggtgg
     8041 aagtggcgat gttttaagcg gtatgatagc tacgctttta ggggtaaaat tcagcgcttt
     8101 ggaagcggct aaaaatgctt gtttagcaca cgctcttgtg gctaaaaaat ataaatttaa
     8161 caaaaacagc tttgatgcaa taaaacttat aaaaggatta aaatgcttgt aaaattagcg
     8221 gtacttttta gtggaaatgg aagtaattta caaaatatct tagaaaaact tcataaaaaa
     8281 actataggta aaaacactta tgaagtcgtg ctttgtcttt gcaataaaaa agatgcttat
     8341 gggatacaaa gagctaaaaa ctttgacctt gaaagcgtga tcattgaaca caaagattat
     8401 aaaaacagag aagaatttga cgaaattttg gtaaaaaaaa tcaaagaaag cggagcagat
     8461 cttactatct tggctggatt tatgcgaatt ttaagccctg tttttacaaa aaatatcaaa
     8521 gcaattaatc ttcatccatc tttactaccc ctttttaaag gagctcatgc tatcaaagaa
     8581 agctatgaaa gcgatatgaa agtagctgga gtgagtgtgc attgggtaaa tgaagaatta
     8641 gatggaggga aaatcatcgc tcaaaaggct tttgaaaaac aaaatttaac ctttgaagaa
     8701 tttgaagcaa aaattcatgg cctagagcat gaaattttac ccttaagtgt agtagaaatt
     8761 tttgaaaatt gtcattaagt taagatattt tatcgctaaa ttttagaaaa ttaaatttac
     8821 ttgagtgttt tatcggtatt tacttttaaa attttttaaa gcatataaaa aatctctaat
     8881 atcgcttact tgatctgtta cccattcatc tacactcatt ttttcatcat cttcatcatc
     8941 ttcatatccc tcctcatctt catcatatcc ataaagtgag gatcatcata aagctcaatt
     9001 tcccaatcac ttaactcaca ttctacatca tcaatgaaat ttttaagagt tgcaccttca
     9061 aaatcttttt tatcgtattc taaaacagtg attagattag gcggtaaggt aactttatat
     9121 tgttcatcaa cttttaaatt accattttcc actagatttt tatattcgta gcttaaaaca
     9181 ttgcctataa aagctcttgc ttcatgtttt tttaagccat ctatggcacc ttttaataac
     9241 tatcattttt aagatagtat tcaaatattt gttgcatatc ttcatctaat aaatttttat
     9301 tttccattgt tgctccttta atttttttgt aggttttctt tttccttatc ctttcttata
     9361 gcttcattta ataaatcaca atattcatta cgatcttcat agtccttata aaagatatta
     9421 aatttctttt caagttgatc ggaagtcatt gcacctgcag cttttaaaag ttttctattt
     9481 ctagctcctt cggcttgatc taaaggtgtc gttaaatagg gaacaaaatt aacattagct
     9541 ccaagctcta ttagaagttg cacggttctg taatttcctg actctttcac tgcttcaaat
     9601 aagggtgtat cctgatattt atagattgat tcaaactcat attcttccat atccacatta
     9661 gcccctcctt tgatggcaag ctctagaaat ttataatcat tattactagc ccaaaaatgt
     9721 ataggagacc agcctgtatc ttcgcgatac acttcaaatt tagctccatg atttgctagg
     9781 tattggataa tttgggggtt tggatttcta acttttagga tatacctata gattaaagct
     9841 tctttgtaaa tgctaggatt atcttccata tatcttacta caatatattt atcattagct
     9901 tctttgatat atttcatatc tgcaaagcga aaattatatt taggatcttt tagacttaag
     9961 ccatactcat caaataaata atctaaaata gaaaaatcat tattatttgc tccacaagtg
    10021 cgagctgctc tcataactca tagccttaat atcttctaat gttttcattg tttttccttg
    10081 taaaaattta attatatgtt atatcaaaat atttaatatt tgctttgaag ttataaaatt
    10141 acactttaaa aaatttcaaa ttttaaggaa gcttatgttc gagtggattt ttagtgctga
    10201 aatgtggatc gctctagcga ctttgattgg cttagagatt gttttaggga tagataatat
    10261 catttttatc gctattttgg taggaagact ccctaaggaa aaaagacaaa gagcaagaat
    10321 ttttggttta agtttggcga tgattacgcg tttgttattg ctcctttctt tattttggat
    10381 tatgaaactt acaactccgc tttttagcgt attttcacaa gaaatttcag gaagggatat
    10441 tattttgatc ttaggtggat tatttttgat agcaaaatcc acactagaaa ttcatcatga
    10501 tatcgataat gccggagaaa aaagcgatga agaggtttta aaagagggag ctaaaagagg
    10561 attttttagc atattgatac aaattgctgt tttagatatt gttttttcac tcgactcggt
    10621 tattactgct gtaggtatgg ttaataatat agaaattatg atgattgcag tggttgtagc
    10681 tgtttttgta atgatgcttg caagcaaaag tatctcaaat ttcgttgatg ataatccaac
    10741 gattaagatt ttagctctag catttttgat tttagttggt gtaactttag ttgccgaagg
    10801 tttggatttt catatttcaa aaacttatgt atattttgct atggcttttt ctttgggtgt
    10861 agaatccatc aatatctata tcaaaaagaa gcgcttagct caagaaaaat cttagaaaat
    10921 gatgataaaa tatacaatga tataaaaatt taaaaaggaa aaaaatgcct aaagatgcaa
    10981 atggaacaga attaaatgct ggagatagcg taagcgtgat aaaagattta aaagttaaag
    11041 gtgctagcac tactttaaaa cgcggaacaa cgataaaaaa tatcaaactt acttctaaag
    11101 aaaatgaaat tgaagctaaa gtagataaat ttggcgttat tgtactaaag actgaatttt
    11161 taaagaaaat ttaggaaaga atttgcgtat tttacttatt ttaaggggga attactacgc
    11221 aggacaagaa gaatttatca aagaaaatcg cttaaaagat tacactcttg atctaaattc
    11281 tttgcgtttg ctttcaggaa gtgtaagtaa aatcgtaagt aaatataaaa atttaaatct
    11341 aaaaaatgat gaagaattat ataaaatttt acttcaattt ttagaaatgc gtatgcaaaa
    11401 aggtgaattt tgcatcatta acgcttataa tgaaaccctt aaggtttata aagaactagc
    11461 taagcaatat cgctatgata tttatattat agattttaaa agctctttag aagaatgtct
    11521 tagaaaaaac gagcaaaaag ccaaagagcg tggctatata gtctcacaat cacttttaaa
    11581 aaaaacccat cacctgcttg aaagaattcc taaaaaatat acgattttaa atcctaatga
    11641 ttggaaaaaa tgcctttatc aaatgcctaa tcttagtaag tataggaaaa ttcaccacat
    11701 aggcgatatt caaggctgct ttagcatctt aaaagaatat ctacaagagc tcgaagatga
    11761 tgaatgctat atctttttag gggattatat cgatagaggc atagaaaatg gcaaggtctt
    11821 aaaattcttg cttaaaattt gcgaaagaga gaatgtatat ttacttgaag gaaatcacga
    11881 aagacatttg ataaaatggg ccaatggaga actatcaagc tctaaagaat ttaacgaaaa
    11941 tacactcaaa gattttagaa aagaaaaact cacgcctagg gatgctagaa agttttatcc
    12001 ttacttaaaa gaatgtctgt actataaatt tcatgaaaaa caagtttttt gctcgcatgg
    12061 cggggtaaat cttttacctt ctaaggctta tcaaataagc tttatgccaa gttatgattt
    12121 tatttatggc gtaggaaatt atgaagagag tcaaaaagta gcaagtcagt tttgtgaatt
    12181 tacaaaagac aatgtttatc aaatctttgg acatagaaac cgcacaaaat tgcctgtgca
    12241 aatagaaaaa agagtatttt tgtgcgaagg taaagtagat gatgggggac atttgcgtat
    12301 agtaacttta gacaaaaaag gttttgagtg tatagaactt aaaaataaag tttatagaaa
    12361 gaaataagcc aaaaaggctt attcttcatc tttgttggtt tttttaacca ccttaacacg
    12421 ctctatagaa ttaccatcca tttttttaac ttcatagtaa caaagctcat cttcaatgcg
    12481 atcacccgct acgggcaagc gccctagaag attaaacaca tagccaccta tcgttacttg
    12541 ctctaaatcc tcatcatagc ttatcaaaag catttcttca acggtttcta tatcgcaacg
    12601 accttggaat tcatagatgt tttcagcaag ttttttatag ctgtcttcct cattttcact
    12661 tttaatctca ccgataattt cttccatgat atcttccatg gttaaaattc cagctgttcc
    12721 accgtattca tcaatcacaa gtgcagtgtg agaacgctct ttattcatca tcacaagaac
    12781 ttttgaaatg ctaatatttt caggaactaa aatcaaaggc ttaacaaaag tatctaaatt
    12841 ttcactctta tcactaagct cattttgcac tatatctcgt atatgtatca tacctaaaat
    12901 agtatcttta gaaccatcta tatatggaaa acgcgtatgc ttatgatcgc aaatgatttg
    12961 catattttca gcataagttt tttgtttatt tagacaaatc atatctttac gaggcgtcat
    13021 cacttctttt gcaacagtat ctgaaaaatc aaccgcattg cggataattt cagtttcaaa
    13081 ttcatccaaa acaccgcctt tttggctttc gcttgctatg attttaatct cttcttcact
    13141 atgagttaac tcgctttctt tggcaggctt gatgccaaaa agcttcaaag tcatggccgc
    13201 aagaaaatcg aaaattttaa tacaaggcaa gaaaagcatc caaaaccaat gaagaggcct
    13261 tgctacccaa agcacagctt tatctgcaat agcaattgca atgctttttg gaacaagctc
    13321 gcctaaaacc acatgcaaaa gagtgatgat actaaaggcg ataataaaag ctatagtatg
    13381 gataataact ccattaaatc caagatttgc aagaggaatt tccaacattt ttgctatagc
    13441 aggctcacct atccaaccaa gggctagcga acttaaagta attcctagct gacaagcact
    13501 aagataggta tcaagtcttg aagtaacttc tagtgctttt ttagcaccta cttttttttc
    13561 cttaaccatt tcttcaagtt ttgaacgacg cactttaaca atactaaatt cagacaaaac
    13621 gaaaaagcca tttaaaagca ctaaagctag tgcaatgaca accataagta tagaatatcc
    13681 tgcatcaaaa gacgctgtag gtaaagtttg gtttaaatct aaaacctgac tggggtccaa
    13741 taaaagctcc ttataaataa aatatttaat tatacacaat taaaagtaaa attttagctt
    13801 aaaaatggtt tttaagctaa aattaatttg cattggagtt taatttaaag catgaaaatg
    13861 cttaaaattc tgattatttt ttgtgctaca ttaaccctat ctattgtcta tgctccgcaa
    13921 cctatagcac ccttattgtc taattatttt catgtaaatt tgcaccaaat ttcttggata
    13981 atcagtgtta cgcttattcc cttagcaatc gcacctttgg tttatggtta tttacttgaa
    14041 attttttcct taaagaaaat tcttgttgtt tctttgtttt tatgttctat ttttggtatt
    14101 attggaaact taaacgataa tttttatttt tttctatttc ttagattttt acaagctctt
    14161 tgtatacctg ctatactgac agcacttctt accttgctta gtcgtttaga aagcgacaat
    14221 atacaaaaaa acatagccat ttatgtaggt gctacaactt ttggtggttt tgttgggagg
    14281 gtttttggaa gttttttgag cgatcttttt tcttggcatt ttgccttgaa tttttttagt
    14341 attttaatga tggtttgtgc ttttttattt ttgtttttta aagagcatcc tataagctta
    14401 aacactcaaa cttccttgag ggatttttta ccctttatca aagaacttag atttatggtg
    14461 atattatttt gtgtttttac tatctttttc tcttttcaaa gcatagtaag ttttttacct
    14521 tttcatctta aagaaagtat aaaagatatc actcaaacac aaattggact tgtttatttg
    14581 ggatttttaa ccggagtaat aagctcacta cttataggta aaaccataga aattttaggc
    14641 tcaaaaattc gcacagctat atttgggttt ttggttttta tagcgggttg tttttgtatg
    14701 atagtaggga atttttattt tgcctttttt gctatgtttg tattttgtag cggaatgttt
    14761 ataagtcatt gtatattttc agggatttta aattcgattg cggataaaaa gggcttggct
    14821 aatggaattt atttgacatt ttattatagt gggggtgctt tgggttctgt attgccaagt
    14881 ttttattatg aaagttttgg ctgggaattt ttatgtattt tcacagcctt tttacttttc
    14941 atcgctttga taatttttag caaatttaga catttttata aatgattttt gtttttattt
    15001 ttcgcgtatt cgatattttt ttcaaattct tttaaacgct tatgtatact tctaagttgg
    15061 gtgatagttg tccaatttgt gataaaaaca ctaaaagaac ttcttacttg atcaaaagca
    15121 ttattaattt gcattacaat accaagtcct atagctcccg caaaaagtcc tggagccatg
    15181 attaaaaatg gaacgataac tatcatttgc tcaaataaaa tcaaccaaat attaaaatat
    15241 ccatagtgca aaaaaagtct tttataattg aatttaagtc ctgtaaaaag ctctatcatg
    15301 gtttcatttt tagcgtattc tttgcggtta tcttcagcat aaacaagctc ttttctaaaa
    15361 gctgcttcgg ctttttgatt gttgtattca agtcctggaa gtttaattcc tacaaaccac
    15421 gatacgatta atcctcctaa agaaatcaaa agtgcaacat aaacaagcaa accatcgatg
    15481 ttttttaaaa aataaaagct agaattctca cttaaatttg caaataaagc cttgcttaca
    15541 acatcgctta aagtccataa aatcggtata aaagctacaa gagtcattaa agctcttata
    15601 aaactaagtc ctaagctttc tacaatttta gaaaaattat aagtatcttc ttgaattctt
    15661 tgcgaacttc cttctatgtt atcatcttta tttttccaaa atttcaaata agaaaaagtc
    15721 atagcttcac gccacttaaa ggcgtaaaca ctagcaaaat aaatattaat cgttgcaatt
    15781 aaaacataag gaatagcaat agctaaaaat actaaaatca aagcataaaa atcactcgca
    15841 gaatagcttt ctttttcaat catagcccta gaattaaaaa aatattccaa taaactttga
    15901 taataataaa gtgcgccttt attgataaaa ttagcttttt ggaaattttc ttgtgctttt
    15961 tgattggcct cttggattaa acttgcattg ttttcaaatt tctcttccgc cttttgcgtt
    16021 gtattagaat ctaaaagctc tatttttggt ttttgtaaaa cattataaaa atcactatac
    16081 catgaattga tcgcaacatt taagcttgtt tgcatatata agaaaaataa aagcaaaaaa
    16141 agccccaaat aagcccataa agcccatttt ttacttgcaa aaaacgaaga aaacatacca
    16201 ccgccttaat ctcaaaacga aaattttaat caattttatt taatcaagag tttatttttt
    16261 acctaaatag tctttaatat tgtaatcaat aggcataaca aaactaattt tttcaccatc
    16321 tttcaacatt tctttaggtg gttttggcaa gggagaagct cttttaaata aacttaaaac
    16381 ttcatcatta agcactgcat aagggcagga ttttttaagc tctttactta agacatttcc
    16441 actttcatca atgcttacgc gaattcttac aacaccttct tgcttttgca ttatcgcttc
    16501 ttgaggatat tttttaaatt tagccaaatg agccataagc aaggcttgat agcttttaat
    16561 ttgttcttta gcattgccac ttactatagt ctgtgtttta tcttcattac tttgtagcgg
    16621 agcgctgagc gattcatttt taaattttga attttcactt gcattagcta tttctttttg
    16681 ggcttgattt tcatcttgtt tttctatctt tttttgagct tttaatacag catttttatc
    16741 ttgggagtta agactcattt tttcatcttg ttttttgttt ttatcttgag aattgctctt
    16801 tttttgatcg attgaaactt cttttaattc tccaatagga agctctgata ccatcataat
    16861 ggaagtaaat tccactcctt gtttaaaatc aacaccgctt gatttttctt gagtatagaa
    16921 agaaaaaaga aaaaacatta ataccaaagc atgcaatatt aaactcgaca ccaatccaaa
    16981 aatcatacca gatttcataa ttaatccacc ttcttacttg aaagggctat ttttccatag
    17041 ccattctctt ttaatttttg cattacttgc ataatatctt catactttac acttttatca
    17101 atatgaaaat aaataatttc ttctttatta cctttggttt ttatatctaa agcatttgca
    17161 agattttcta ggcttaattt atcatcatta atagccaaag tattatcggt atttaaataa
    17221 agtatgatgg gatttttaag cttatcctct gcttgctgcg aactcttagg cagttctatc
    17281 ttaatagaac ttgtaataag aggagtaaca gccataaaaa cgatcaataa tacaagcata
    17341 atatctataa aaggagttat attgatctca cttaactcct cttctttgtg agccatttca
    17401 gtttttatca ttaaaataac tcctatgaaa aagtatataa acaaaatttg caagctcgtc
    17461 taaatggtgc ataagtttta aattttttct tgtaagataa ttataaaaaa gcaccgcagg
    17521 aatagcagct accaagccaa aagctgtagc aaacaaggct tcagctatac ccggtgcaac
    17581 gactgctaag gaggcattac caagattggc tatacctata aatgcattca taatccccca
    17641 aactgttcca aaaagcccta taaaaggtgc actagcgcct atgcttgcaa gcaagctcaa
    17701 gccatttttg cttgctgtga tttgttttga gatggtattt tgcaagcgca attctatacg
    17761 ctcttttata tgatcatttt tatattcact tttttcaagc tcatcttgaa tttctaaaga
    17821 taaaacacct gcaaaacctt ttgtctgatc taattcattg agatttttta attcttttat
    17881 cttgtgtata gagaagtcta aattttgctt cataaaataa aattgcataa gcttagaaat
    17941 aaaaaccgcc catgctaaaa cagaaaataa aaccaatata taaataacac cttttaccac
    18001 ctcatcagcg ttttgataaa gactagaaag agaaagctct atttttggta cttcggcttc
    18061 tattttagga gaatcaaaag ataaatttgt atctgttaca ttcacttcag catttaaatt
    18121 taacaataaa aaacaaaata aaaatatttt ttttagcatt tatatatttc cttaatattt
    18181 atattcaaaa cttactataa aggtgcgacc gcgagcagag ttgttataaa tataaatagg
    18241 atcaaataac cctccagcat tttggttttc ccctgtgttg taagagtaaa gtgcatccat
    18301 atagtttttg tcaaataaat tttgtacttc tgctttgatt gtaaagtttt tcaaaatttt
    18361 ataatttgca taaagatcaa caatagttgg tatttttggc aattcatctg tagttttaag
    18421 cggagccata gcatcaggat tgcttggatc atcatctaag ctacctacag gaactattct
    18481 ctttgctttt cctgtgtatt tagcaagagc tcctagagtt agcttttctt caaataatct
    18541 tacacccata tcaagattag cataatgctc tggaagttgg gcaaattgac tttggcctga
    18601 ttgtgcaccc ccaaattcta aagattctgt atctgaaaat ttatgcttgg atttttgata
    18661 agcataagat agtatagaat aaaaaaatcc cgtatcgtat ttaaattcaa gttcaacccc
    18721 gtgaaattta gctttttcat catcatttaa ttgcataaga aagatagcat cgtcagcttt
    18781 ttgccaatat cttctattgt aaatataatt ttttacctta gtatcataat aaagcatttt
    18841 aaaacctaaa gtatcgctat catttaaaat ttcatgtgta aaagaattaa aaccgatttg
    18901 ataagtatct gcactttcag cctttaaaaa tgtgttcata ttatgctcaa aacttgcatc
    18961 atgggtgaaa aaatactctt ggacatttgg aattctatgg cttttagaat aagaaataaa
    19021 aggattaaaa agcggatgga tatctgctga aagcatcaaa gaataattaa aattattgta
    19081 atccttttct aaatttgtcg cattttttgg ctggcaataa ggattagcca tgctacaaat
    19141 tcctttatat ccacttaatt gcgcattagt ccaattgata ttagaattta aggtgaaaat
    19201 tccttttgta aaactcgtat ccaaataaag ggttttgata tcttgttttc ctttaggata
    19261 aaaactggtt aaaatataag gcaaaagcac tctatcttgt ggaaaatcat tactataatg
    19321 attgtttaaa atattaaccc cataagtaaa atacaaattt gaatcttgtg aaaattcttt
    19381 attcatggta ttactaagat caaaagttac cgctcgattt ttagtcttaa ctccactcat
    19441 atcgtgataa ccccaagtgc tgccttgatt atacttttgc tttccatcat tataagcaaa
    19501 taaaaacttt agatccaaaa gattagaatc aggatttaaa cgataatcaa tttgataggt
    19561 atcatttgta atctttctac ccgcaagatt gttcttataa gctctatagt ttaaaatcgc
    19621 ctcactaata tcggatttgt attctacttt aaagagttga cttctaggct gattataaag
    19681 attatttggg tttataggtg ctgctaaatt atcatctgga atgccatcat catcagtgtc
    19741 aaatgggggt ttttgatcgc ctatatagcc tccacctcca attttataat tttgagaaac
    19801 attttgccca ctataagcaa ataaaatgcc taaattagca ttattttcta acatagtttt
    19861 tcctgctata gcacccataa aattaggtcc tatagcattg ctaccataag agtattttcc
    19921 caaaaaacca aaaactcttc cttcttgtac tatatcatct acgcctatag ttctaaaatt
    19981 agccgaaccc attaaagcat tagctccatt tgccccgcta aaagttccac gattaacatc
    20041 taaggcgact aaaaaatttt tatctattgg ggctgtaaaa cttgaagttc caatttgccc
    20101 atgaaagcta tcatcacttg cagaaccaaa aaaagtttga gttacaccat caatttgtgt
    20161 atttactctt ccaagtcctg tcataccgcg aatatttact gaaactcccc cttgtgcttg
    20221 atctacttga gtataagcac caggaacact acgcactata gaatctatac tttgagtgtt
    20281 tgaatttaaa ttatctcttg tgcttgttgc tccgggagtt acaaagggtt tttcatcgtt
    20341 tttgattttt gagcctgaaa tttcaagact atcaaattct aattcttcgg aaaaagcaaa
    20401 attagcaaaa cataaaccca taacacaaaa taaacttaat tttttcatta ttctccttta
    20461 ataataaata aaagtataat cactgtcttt taaatctctt tctccatagt ttaaattcac
    20521 cacgactatt tttttatcac ttttaaaatc ttgtatatgt aaaggaattc ctattttctt
    20581 gcttgtatga tagctcccag ctaacaataa aaccttgttt gtatgatgaa ccaatacatc
    20641 agccattcgc ctgtctttaa attgttgaat ttctactaat ttatctagta attctttatt
    20701 ttcttgagga tttaatttat gacttaagga tataatgtca aaaatttgtt tttttacttc
    20761 atttgtggtt gaaacatagc cctttaaagg ctgaactcca ttataaatac ttgtaatttc
    20821 tgagcgtgaa agatttgcgc ctaatatttt tgctcttgaa taaaaaactg cattgacaaa
    20881 ttgatcataa tctttccatt tccagccctt atcccaattt aacgcattag taagttcatt
    20941 ggttttaatg gtttttttat ttttaaaagc tttatctaag tgattttgct ctgtgcttgc
    21001 taacatttct aaagccacat caaagcttat attttgagaa cttaaatttc cttctaaggc
    21061 attaaaaatc ataacttggc ttatcttgtg ctttgcttca tcgtgttttt cgccaagcag
    21121 tatcacatct gcttttaata attctacaat catatcttca aaagaaatct ttttttgagt
    21181 atgagtatca agtatataaa aatctttgtt ttcttgaagt ggaggtgatt tttgtaaaac
    21241 agcacaagcg cttaacataa agcttataaa taatgtgctt aacatggtat aaaatttcat
    21301 tattatttct actttcttt
//
LOCUS       DBBXOW010000026        20833 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.027, whole genome shotgun sequence.
ACCESSION   DBBXOW010000026 DBBXOW010000000
VERSION     DBBXOW010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20833
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.027"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..230
                     /locus_tag="ACJE1S_000911"
     CDS             <1..230
                     /locus_tag="ACJE1S_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806474.1"
                     /translation="EKAKQDKNISMVYSQFNKYFNEVFKNKIEKKEIIQENNQSLALE
                     NKEPIKLKIDTKSKKVFDAKFGKDIKEDDLL"
     gene            584..874
                     /locus_tag="ACJE1S_000912"
     CDS             584..874
                     /locus_tag="ACJE1S_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806475.1"
                     /translation="MQMSVSEICCKKFFVFKSRLRRKRLKKNAFKYRYNSALIRFLIF
                     PPVGQIFPPVGKKLLVVGKLFLEKFIFPNKLGKNYFFCLNMYHFLGKNDIIL"
     gene            898..1743
                     /locus_tag="ACJE1S_000913"
     CDS             898..1743
                     /locus_tag="ACJE1S_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806476.1"
                     /translation="MKEIVDLENKPVARLYSKVEEKVDNITGEVTTIVSSFLQKEKTK
                     DDFIKLFVENINYLTDNLSNSALRVVLMMFKNLNYQNIFHYNSDFVSYFTNKKILGKS
                     SVYRAIKELEDKNVIFKITKEQQEEYDIISPNSYIMNPQIIGKGSFKDLKKLRQTTIK
                     EFDFEKLEMIQKVEVESEYEGLDEVKENPENYYIEDIKQIAYPNTIENQIIISKKEAE
                     ADNQTLIANDTQPSLFDENQKEQEARLFIEKYAGILTGAYDSTKSAKEMKRELLDKDL
                     EEGRI"
     gene            1740..2153
                     /locus_tag="ACJE1S_000914"
     CDS             1740..2153
                     /locus_tag="ACJE1S_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HGG0806477.1"
                     /translation="MKKVYLDTNIFLDYFNTERTYHNEAKQLMYYLLTNNIQIVFSED
                     MISTIAYLIKKENLNNFTHFLKDISLEKNFNITSFGVSVINMACDCYEKYRGDFEDYL
                     QYFCAEKEGCCAIYTMDKKFPNLKIPIKRYGEIDI"
     gene            2664..3602
                     /gene="trbB"
                     /locus_tag="ACJE1S_000915"
     CDS             2664..3602
                     /gene="trbB"
                     /locus_tag="ACJE1S_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer ATPase TrbB"
                     /protein_id="HGG0806478.1"
                     /translation="MSNLEFQARINEKIKREFGDILVHLEDKETIELMLNSDGKLWLE
                     KLGQDMICLGEFSEAKAKSIITAVSTLLDTTTNADNPILECELPLDGSRFEALLPPIV
                     AKPTFTIRKKAVKIFTLDDYVESKILTPKQKEVLINAIKERQNILVVGGTGSGKTTFS
                     NAIIDGISKITPEHRIVIIEDTAELQCASENKVILRATDKVDMLRLLKATMRLRPDRI
                     IVGETRGKEALDLLKAWNTGHPGGIATIHANSANGGLTRMEQLISEATSAKMSKLIAE
                     AVNLIVFISKTKEGRKIKEIIKVIDYENDKYITQGV"
     gene            3603..3899
                     /locus_tag="ACJE1S_000916"
     CDS             3603..3899
                     /locus_tag="ACJE1S_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HGG0806479.1"
                     /translation="MKKFILLFLILGLGYALASTTGAGLPWESPLQTIKQSISGPVAF
                     VISLLAIIAAGAGLIWGGELSGFLKTLIYIVIIIALVVGANSFMSLFTTSGALI"
     gene            3899..4186
                     /locus_tag="ACJE1S_000917"
     CDS             3899..4186
                     /locus_tag="ACJE1S_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbD"
                     /protein_id="HGG0806480.1"
                     /translation="MEELHRVDIYSALNKPNLMLGADRELIMMTGLISASLIFTGATI
                     VTTIVGVVLFFICSLLLRLMAKSDPLMRQIFIRQNKYKKFYYPQSTPFSKD"
     gene            4188..6653
                     /locus_tag="ACJE1S_000918"
     CDS             4188..6653
                     /locus_tag="ACJE1S_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HGG0806481.1"
                     /translation="MLALKEFRSKAKAFPDILNYASFIDEGILLNKDGSLTAGFYYRA
                     GDISSMTISERNTLSARINAILNTLGNGWAVHIDCSRIKTENYIDGETFYKSNIAQIL
                     ENERKHYFENVEHFENLFTMIFTYLPPHKNISKITNLMIIDENVNKNQSDKILEYFKT
                     TLQKLEDSLSNYIKIERMLPRVVTDEYNNEYILDDMLEYINFCICGERQKIILPNAPM
                     FLDCLLGGKHFETGMYPRIDNQYIGIIAIEGFPSESYPNILNALTELNFDYRFNTRFI
                     FLDHYEAEKSLNKYRKKWQQKTRGWLDQLLDCPTRKQDDHAVLMVQELDSALSESKSG
                     MIGYGYYTANIVVFDRDNENLEYKLKDIRRVLEGLGFLSRTETINSVEAYLGTLPGFV
                     YPNLRRPILNTLNLTHLIPLASVWAGEKYNPSERFPPNSPPLMQVVTSGNTPFRLNLH
                     VSDLGHTLIFGPPGSGKSTLLANIFLAWQKYPNAKIYAFDKGQSLLAPTLATGGIHYD
                     VAGDHSSLAFAPLANIKTDAEIAWAEFWIETCLKLQNVNITPKQKKLIHEALISHINT
                     NSTSLTEFVSALQDSDLRDALNYYTISGTGGFLFDSEEDKLSLSSITTFEIEELMNLG
                     DQYIIPALLYIFNRIEKGLDGSPTLLIIDEAWIALKHPAFKDKIVNWLKVLRKANVAV
                     IMATQSLSDSAKSGILDILQEYCPTKIFLPNPEAYKKGSENVLAPYDFYKIFGLNDVQ
                     ISIINNAIQKREYYYTSPLGTRLFNLALGKTNLAFTTISDKVSVKRVRQLYEKHKENW
                     AYKWLEEKEINYKRFDNSQKEQI"
     gene            6650..7321
                     /locus_tag="ACJE1S_000919"
     CDS             6650..7321
                     /locus_tag="ACJE1S_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbM/KikA/MpfK family conjugal transfer protein"
                     /protein_id="HGG0806482.1"
                     /translation="MKNFIFGVKKITLALSATLLISSNAFADDILTGDTKLACEAILC
                     LSSGTRPSECSSSLARYFSIKFKKPWKTINARRAFLNLCPIQNDANIEDLVLNNLVDD
                     VLPVSDPRQCTPNYLNTQVETKRSYSTFGIMSYRINPNMPNFCHALINHAYTDYKTPK
                     YKCTGEFYNSLEWKLSAKLQLITQQAYESLSDDQRYMISRTCGDRNCYDYYQKIPFTK
                     ECWTY"
     gene            7333..7704
                     /locus_tag="ACJE1S_000920"
                     /pseudo
     CDS             7333..7704
                     /locus_tag="ACJE1S_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869250.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
     gene            7776..8330
                     /locus_tag="ACJE1S_000921"
     CDS             7776..8330
                     /locus_tag="ACJE1S_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HGG0806483.1"
                     /translation="MSKVILFENEELGQVRTIRDKNNEPLFCLNDICKILNIKKTNSV
                     RDSINKEFDKGGVFEWHPFKTLGGIQKFIVINEPELYFVLMRSDKPKAKPFRQWVIKE
                     VLPSIRKQGYYASNNAPKLENYNKYKIPNTPYKENIIKAIMQTEQNRNCEFEELIAYE
                     IKEIYKDNKSHIEQKINFKVKGLI"
     gene            8918..9712
                     /gene="trbJ"
                     /locus_tag="ACJE1S_000922"
     CDS             8918..9712
                     /gene="trbJ"
                     /locus_tag="ACJE1S_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HGG0806484.1"
                     /translation="MKKSLFGVKKATSTIIATLIIGTNNAFAGGIPVIDLSAIANQVK
                     DYAMQLQQYEQMYSQLQQQIQMVQMQKQNLERLTKEDWDNLGTVLYQTRNVMNKVNGI
                     SYDIGNVSRKFEDTYKNFEGYSNDLENATNESERNKIYSDRYKQIAETNQNTFNGTLQ
                     QLELRYQDLESEDALIARLKANSQNSNGNLQVIQATNDLIAYQIDEIRKLRSVIMDQS
                     NMLTNYLASQNNQRIMQQAKIDKFIEDTGYIEKTWGKSNPDALKWK"
     gene            9760..10029
                     /locus_tag="ACJE1S_000923"
     CDS             9760..10029
                     /locus_tag="ACJE1S_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005023564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HGG0806485.1"
                     /translation="MKHFIFGGLLGLGALAFLAGCGDEAKTNDYYKTHLDEAKARVAE
                     CKKMEKMNETQQRDCSNAKWAVETEDTGYIEKTWGKSNPDALKWK"
     gene            9914..11197
                     /gene="trbL"
                     /locus_tag="ACJE1S_000924"
     CDS             9914..11197
                     /gene="trbL"
                     /locus_tag="ACJE1S_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005023563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HGG0806486.1"
                     /translation="MKLNKGIVLMQNGRLKQKIQVILKKLGVNQTQTLLNGNKLAIIF
                     LIFLAPNLAFGAESAEGVLSIIRNGLLSWTPLIKTACLWVFWTLVIIDLVWTFGLKAL
                     SGFEFGDFIATLIKKVMYIGIFLLLFNIDQWLQIIFNSFSQLATSVNNGTAVSPNNII
                     IQALSIVRKIIQSMDFWSPGDSILKVIAGVIILIAFVLMAIDLLIVYLKFFLMNVIVF
                     FALALGGLSHFKQIGLNPITTAIKVGVELFMIQGLMALCINMIDTINNEITQNSSVEI
                     ILTILTTALIFCMITKMVPGIIEAVFNGSIGESAGAAAGFRAVATMAAGAATGAAVGA
                     VGVTRAMNAAKELHLAEGGKGGMDLVKGVAKHLATSGGEHLRDNLTKGRMPHQMANRL
                     QEKLKDIQGKASEGGISSGTPKEESYQSGVNPNAM"
     gene            11414..12109
                     /locus_tag="ACJE1S_000925"
     CDS             11414..12109
                     /locus_tag="ACJE1S_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VirB8/TrbF family protein"
                     /protein_id="HGG0806487.1"
                     /translation="MNIFRQKQKIEKNEFDTSSNPYLNAKTEWLERYGDYITRAKNWQ
                     IVAIISLAMCFLCVLFIGYIGSQNKLIPYIVEVDKLGNTAKVGMVQNIDLKNPNVIKY
                     SLNTFIYSWRSVWGNPQTQRKFIFDAYTYVEPKSKAFNFLNEEYRKNNPFERATKENV
                     RVKIKNIVPQNIDTWQVEWEETTTNLNEDILSKETYRGLFQIKQIVPTTEEQILKNPL
                     GIFITDLNFAKIL"
     gene            12119..13048
                     /gene="trbG"
                     /locus_tag="ACJE1S_000926"
     CDS             12119..13048
                     /gene="trbG"
                     /locus_tag="ACJE1S_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HGG0806488.1"
                     /translation="MKKIILLSSLIATSLFANNLNERDFANLTPKEKKDLAIAQKWIN
                     SKTTTIQGNNGEVIFLYGEAMPSIVTAPLRLTDISLEPGEVIKDVQIGDSIRWAISLS
                     ISGEEPYLVSHIIVKPTDKNLQTTMNIMTNKRVYRLNLISEAKKFMPAVSFNYTNQII
                     HTLEDYKNQMKAKSEAKNFYKTKDDEIPSNIENLDFGYSIEGNAPFKPLRIYNDGIKT
                     YIQMPKNLKFYEAPALMVLDSSNEKQIVNYRLKYDTFIVDRLFNKAILLSNVGSKQEK
                     ITITKHSNKANQDIVNNVLYDLSLQNKNKKDNK"
     gene            13045..13482
                     /locus_tag="ACJE1S_000927"
     CDS             13045..13482
                     /locus_tag="ACJE1S_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806489.1"
                     /translation="MRILFLALIALFITSCAKVNSEYFTSSFSVKETKINYDKIADDF
                     SQFIISYYLPNKTTFYFNDINDNKAFSDYFVNTLRNKGYAISNDHSRKNLTFLSYQVS
                     QIDNENVIAIFNINESKINVIYKIIENKLVKINMTSFNFTPQN"
     gene            13493..14722
                     /locus_tag="ACJE1S_000928"
     CDS             13493..14722
                     /locus_tag="ACJE1S_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HGG0806490.1"
                     /translation="MLEINTSPNKFLPKNNKRLSKVPIIILFTIAVIVLFSVFYVALS
                     RKQNLEKQATQTAPKEETQSTSKIENIASYVDELSQTKQIKEQNSTLQPVNNTIPITQ
                     QVQQEIKPQPIQTPILMQNNEIDERELRLKKDMQLKALISQTSLGIKSEIQEKPTIGN
                     HFTPSQTDYPNIPNDQVNTSAGLGGLDTSANKDAQGQQFLSQKNDNGYLKHSKQKPLS
                     PYEIKAGWNIPAVLITGVNSDLPGQILAQVTQNVYDTSTGKYLLIPQGTKVVGAYSSN
                     IIYGQSRLLVAWNKLIFPNGDTLNIDSMQGTSQDGYTGFEDEVDNHYFRIFGSAFLLS
                     SITAGIALSDNSSTNGEKETASDKAISQAIQQMGQVASEMIRKNMNVSPTLKIRPGYK
                     FNIFVTKDIILEPLELR"
     gene            14722..14967
                     /locus_tag="ACJE1S_000929"
     CDS             14722..14967
                     /locus_tag="ACJE1S_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806491.1"
                     /translation="MDKLLKERRIIIFGNLFCIFILVFFTYINWNNLSMLIPAWIVIS
                     ILEIILMIAYFYNKKGIQNYKNNIELYKNLAKDLNND"
     gene            14960..15505
                     /locus_tag="ACJE1S_000930"
     CDS             14960..15505
                     /locus_tag="ACJE1S_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HGG0806492.1"
                     /translation="MIDIALIEQCKNPNVETQIIQKIIQIESNNQQFAININKIGSFI
                     PKTKDEAKTLTQSFINKGYSVDIGLMQFNSNNLKTPTFKNYSIDDLLDPCKNIKAGSD
                     IFYLAYEMTNENLAKEERINQALSIYNTGDLKKGFSNGYVAKYDSTAKTIDNLEEKAR
                     KSDTRIKIAYNLFNLQTQKKE"
     gene            15602..15964
                     /locus_tag="ACJE1S_000931"
     CDS             15602..15964
                     /locus_tag="ACJE1S_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG0806493.1"
                     /translation="MINNITIGGRLTADAELRHSNQGSIICTFTLANNRKYKEIENST
                     YIEVSLFGSFANAMHPYLKKGISVDVVGELTQDTWEHEGKIYSKHRIKAKEIDFRTPK
                     KEKQTIPNIEEGENYEGF"
     gene            15951..16091
                     /locus_tag="ACJE1S_000932"
     CDS             15951..16091
                     /locus_tag="ACJE1S_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806494.1"
                     /translation="MKDFKELETIPNFSYEIDPLTAEELGAFEENALSEEDAKEGIED
                     QG"
     gene            16096..18309
                     /locus_tag="ACJE1S_000933"
     CDS             16096..18309
                     /locus_tag="ACJE1S_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zincin-like metallopeptidase domain-containing
                     protein"
                     /protein_id="HGG0806495.1"
                     /translation="MKNKDFIQETADKIIESLKNGTAPWIKPWKGIDLANNMPYNPIT
                     NKPYNGINSINLMLQNYSDPRWLTYKQAQSINAQVKKGEKSTLIQYWQFSEIVDKLDE
                     EGNVITNEKGEVEQIEIKLENPKVFFAYVFNAEQIENMPKLEPKQEIDNFQIIKEAQK
                     ILDDSKAIIHHQGNRAFYNATNDTITLPPKENFLNESAYYATALHELGHWSGHSSRLD
                     RDLNNPFGSKEYAKEELRAEIASFLFNGKIGLDYDPGQHLSYIDSWVQILEDKPNEIF
                     KATSDATKIVNFIESLSLEQKQKIELENSNTQNQALKQDKELNLATRKTYLYVPFEEK
                     EFAKKAGAKWDKEAKMWYAPKGADLKNFTQWLNQSPLTQSYNNTHDEFKAFLEKYELN
                     IEGQPIMDGKLHRVSVIGDKGREKSGAYVGFLNGHPAGFVQNYKTGIKENWKSANSLE
                     NTKNKEINLQNALEHNKALKEQRDKELNQAYENTAVKLENEYNNARWANSEHPYLKEK
                     GFDKNFYLKQDKNGNLLIPLRDIEGKYWATQRIFANGDKMIGATRTAEEKEQGIEYPA
                     KKQGNFFLLGAKNLNNVNEVYICEGFATSASVYEATKSPTIMGVDAGNLEIIVTNIKE
                     KYPKMNIIIAGDNDVKKELNGNKNVGKETALGIQKKYPEVKVVLPNFTNQEAQKGLSD
                     FNDLMKSRGLEEIKKQLKEQIAKQLMVEKATTKALDKNKGINKEITAKKDIGISL"
     gene            18306..20129
                     /locus_tag="ACJE1S_000934"
     CDS             18306..20129
                     /locus_tag="ACJE1S_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HGG0806496.1"
                     /translation="MKKQTNQTLVYILAITGILIAFIIISQIATQYLAKSFNYSPSLG
                     ETLLYGFYNPFKWISWSYTYYSFYPDFFKKFFMVMFAGIAFCFIVFILVKLAFLRKAK
                     AIENLHGSAHWATLEEVKESGVFDKDKGVYIGGFEHKKTLHYLRHDGPEHVMLFAPTR
                     SGKGVSLLLPTLLSWGESALIFDIKGELWALTAGWRQKYAKNKVLKLDPTCLDDSAVK
                     FNILEEIRLETMHEIKDTQNIAINLIFKGETPPTNPTQGSTSYFKSEAGNFLVSIILY
                     ALHLKKCQGKNTPNLTDIYKFINDPNQSIDELLEEMVECDISTMDKNTQEIIQSISRS
                     MKNKATQELSGVVGTASEALNLYIDPILAKNTAKSDFKIKDLMNHESPISLYLIIPPG
                     QKDRLRPFFNLLINQIFRTLTDDSLNFKNGENIKRYKHKMLVLADELTMFGKLSVLEE
                     NLAYMAGYGMKFYGSIQDIQQLYSIYGEKETIISNCHIRIAFAPNKIETAKLLSEMGG
                     ITTIIKKSLTSSGKRTAVMLGNVSETIQEVQRPLITADECMRLPSAKKDKDDKIIAPG
                     DMLIFIAGQAPIYGKQILYFKDPAFLARSKVTLDKQVSDIL"
     gene            20140..>20833
                     /locus_tag="ACJE1S_000935"
     CDS             20140..>20833
                     /locus_tag="ACJE1S_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraL"
                     /protein_id="HGG0806497.1"
                     /translation="MAKIHFVLNGKGGIGKSFISSLLCQYFLDKGESIVAIDTDPNNT
                     TLLNVKALKAKFLQLIDDDGKFDVRAFDKIVELAFEKKAENYIIDSGATTFIPLIDYL
                     KENEVLDFLTNNNLEVYMHVPIVGGQARDDTILGLTQLTQAFNCSFVVWVNEYHGSII
                     KDDFEFEETKEYQAIKEKIKAIIYLNALSKDTFGKDLLELTSKNLTFGEAMQDKNFSL
                     MSKQRLKIFKDKA"
BASE COUNT         8275 a         2843 c         3368 g         6347 t
ORIGIN      
        1 atgaaaaagc aaagcaagat aaaaatatat caatggttta ttcacaattt aataaatact
       61 tcaatgaagt ttttaaaaat aaaatagaga aaaaagaaat aatacaggaa aataatcaat
      121 ctttagcttt ggaaaataaa gaacctatca aactaaagat tgacacaaaa tcaaaaaaag
      181 tatttgacgc taaatttgga aaagatatca aagaagatga tttgttgtaa tttacttatt
      241 acaccaggat aaaaatgttt aagaaaacta aaaacttaaa tgattaaaaa cctattttac
      301 cattacttta agttttaaag aaaaacactc taaacttaaa aagaaatatt tttatttgta
      361 aaaagcttat attatcgata atcaaagcaa ttaaacctta gtttgaaaac tctacttttc
      421 aaatcataac ttctttttgg tgtatatagc aaattgcacc tgttaaggtg ctataatttg
      481 cataaatata gggtgcgggg tgtgcagtcg cctagagcga caaacgaact tgaccccgcc
      541 ctattgttgt aagaagagta agagacgctt agtctcttca aatttgcaaa tgagcgttag
      601 cgaaatttgc tgtaaaaaat tttttgtttt caagagtaga ttaagaagga aaagacttaa
      661 aaaaaatgct ttcaaatata ggtataatag tgctttgata aggtttttaa ttttcccacc
      721 agtgggacaa attttcccac cagtgggaaa aaaactgctc gtggtgggaa aattattttt
      781 agaaaaattt atatttccaa ataaattggg aaaaaattac tttttttgct taaatatgta
      841 tcattttttg ggaaaaaatg atataatact ttgatttaga acaaaaaaag gttaagtatg
      901 aaagaaatag tagatttgga aaacaagcca gtagctagat tatatagcaa agttgaagag
      961 aaggttgata atattacagg ggaagttact accattgtaa gctcttttct ccaaaaagaa
     1021 aaaaccaaag atgattttat taagcttttt gtagaaaata ttaattatct tactgataat
     1081 ctttctaatt ctgccctaag agtagtatta atgatgttta aaaatttaaa ttatcaaaat
     1141 atttttcatt acaatagtga ttttgtatct tattttacaa ataaaaaaat tctaggaaaa
     1201 tctagtgttt atcgtgcaat aaaagaactt gaagataaaa atgtaatttt taaaatcaca
     1261 aaagaacaac aagaagagta tgatattata agtccaaatt catatattat gaaccctcaa
     1321 attatcggga agggttcttt taaagatcta aagaaactaa gacaaacaac aataaaagaa
     1381 tttgattttg aaaaattgga aatgatacaa aaagtagaag tagaaagtga atatgaagga
     1441 ctagacgaag ttaaagaaaa tcctgaaaat tattatatcg aagatattaa acaaattgct
     1501 tatcctaata ccatagagaa tcaaattatt atatctaaaa aagaagcgga agcagataat
     1561 caaactctca ttgctaatga tacacaacct tctttattcg atgaaaatca aaaagaacaa
     1621 gaagctaggc tatttataga aaaatatgct gggatactta ctggtgcata cgactctaca
     1681 aaatcagcaa aagaaatgaa aagagagtta ttagataaag atttagaaga aggtagaata
     1741 tgaaaaaagt ttatttagat acaaatattt ttctagatta tttcaatact gaaagaacct
     1801 atcataatga agctaaacaa ttaatgtatt atttactcac aaacaatatt caaattgttt
     1861 tctctgaaga tatgatttct accattgctt atcttatcaa aaaagaaaat ttaaataatt
     1921 tcactcattt cttaaaagat atttcattag aaaaaaattt taatatcact tcttttggtg
     1981 taagtgtcat taatatggct tgtgattgtt atgagaaata tcgaggagac tttgaagact
     2041 atttgcaata tttttgtgcc gaaaaagaag gctgttgtgc tatctacacc atggataaaa
     2101 aatttccaaa tttaaaaata cctataaaaa gatatggtga gattgatatt taaaactcta
     2161 ttttgtttca attgatttca ttttggataa ttttatgaaa caaaaattaa aaattgtatt
     2221 ttgtatcaag aaaatgaaaa aaataaacat tcaaatgtta aaaatgtatc atattttgag
     2281 acaaaagcaa aaaatctata ttttgtctca aaaaaatgaa aaaaatagaa aattttttat
     2341 aaaaaatctc tatttcttct caaaaaatga gaaaaataaa cattcaattg ttaaaaatgt
     2401 atcattttat tagaaaaaaa ccttgacaat taaattaaaa ataatataat aacggtatta
     2461 gtttttaatt tttggagaat tttttgagaa aaaataaact taatttttac ttaatagcta
     2521 gagagagaga gagagagaga gagagagaga gcagagtaac cttaaacttt tcttaatttt
     2581 taaactttta caactccaca atccatacaa aaaaaatcct gacaaatttt taactcttgt
     2641 aattgaatca aaaggactct tgaatgagta atcttgagtt tcaagcaaga atcaacgaaa
     2701 aaatcaaaag agaatttggc gatattttag ttcatttgga agataaagaa acaatagagc
     2761 ttatgctaaa ttcagacggc aaactttggc ttgaaaagct aggtcaagat atgatatgtc
     2821 ttggcgaatt ttcagaagct aaagcaaaat ctatcattac cgcagtttct acccttcttg
     2881 atacaaccac aaatgcagac aatcctattt tagagtgcga attgccactt gatggatcaa
     2941 gatttgaagc tctattgcct cctattgttg caaaaccaac ctttacaatc agaaaaaaag
     3001 ctgtaaaaat ctttactctt gatgattatg tagaatctaa gatcctcaca ccaaaacaaa
     3061 aagaagtttt aatcaatgct attaaagaac gccaaaatat tttagttgtt ggtggaactg
     3121 gtagtggtaa aaccactttt tcaaatgcta ttattgacgg catttctaaa atcacacccg
     3181 agcatagaat agtaatcatt gaagatactg cagaacttca atgtgcgagt gagaataaag
     3241 taattttaag agctacggat aaagtagata tgcttaggct tttaaaagcc acaatgcgac
     3301 ttcgtcccga tagaattata gtaggcgaaa caagagggaa agaggcttta gacttattaa
     3361 aagcttggaa tacaggacac cctggaggaa tagccacaat ccatgctaat tctgcgaatg
     3421 ggggacttac aaggatggaa caattaatct ctgaagcaac aagtgcaaag atgagcaaat
     3481 taattgctga agctgtgaat ttaattgttt ttatctcaaa aactaaggag ggcagaaaaa
     3541 taaaagaaat cataaaagta attgattatg aaaacgacaa atatattaca caaggagttt
     3601 aaatgaaaaa atttatacta ttatttttaa tactaggtct aggttatgca ctagcttcaa
     3661 ctacaggtgc tggtttgcct tgggaaagtc cattacagac aatcaaacaa agtatcagtg
     3721 gtccggtagc ttttgttatt tcgcttttgg cgataattgc tgcgggtgct ggtttaattt
     3781 ggggaggaga gcttagcggg tttttgaaaa ctttaatcta tattgtaatt ataatcgctt
     3841 tagttgtagg agctaatagc tttatgtcac tattcacaac gagcggagca ttaatttaat
     3901 ggaagagtta catagagtag atatttatag cgcattaaac aaaccaaatt taatgcttgg
     3961 tgcagataga gaactaatta tgatgacagg tcttatttct gcatctctaa tttttacagg
     4021 agcgacaata gtcactacta tcgttggagt tgtattgttt tttatctgca gtcttctttt
     4081 aagattaatg gcaaaaagcg atcctcttat gcgtcaaatt tttatacgcc aaaataagta
     4141 taaaaaattt tactatccgc aaagcacacc attttcaaag gattaaaatg ttagcactta
     4201 aagaattcag aagtaaagca aaagcatttc ccgatattct aaactatgca agttttatag
     4261 atgaaggtat tttacttaac aaggacggga gtttaacagc aggattttat tatcgtgctg
     4321 gagatattag ttctatgact ataagtgaaa gaaatacttt aagtgctaga attaatgcaa
     4381 tattaaatac tttaggtaat ggctgggcgg ttcatattga ttgctcaaga attaaaacag
     4441 aaaattatat tgatggcgaa actttttata aaagcaatat tgcacaaatt cttgaaaatg
     4501 aaagaaaaca ttattttgaa aatgtagaac attttgaaaa tctttttaca atgattttta
     4561 cttatttacc tccacataaa aatataagta aaatcactaa tttaatgata attgatgaaa
     4621 atgttaataa aaatcaaagc gataaaatat tggaatactt taaaactact cttcaaaaac
     4681 tagaagatag tttgagcaat tatatcaaaa tagaaagaat gctaccaagg gtagttactg
     4741 atgaatataa taatgaatat attttagatg atatgcttga atatattaat ttttgtattt
     4801 gtggtgaaag acaaaaaata atattaccaa atgcccctat gtttttggat tgtttgttgg
     4861 gcggaaaaca ttttgaaaca ggaatgtatc caagaattga taatcaatac ataggaatta
     4921 ttgctattga aggttttcca agtgaaagtt atccaaatat tttaaatgca cttacagaac
     4981 ttaattttga ctatagattt aacacgagat ttattttttt agatcattat gaagctgaaa
     5041 aatcacttaa taaatatcgt aaaaaatggc aacaaaaaac aagaggttgg ttagatcaat
     5101 tattagattg ccctacaaga aaacaagatg atcatgctgt tcttatggtg caagaactag
     5161 attctgcatt atcagaatca aaaagcggta tgatagggta tggttattac actgctaata
     5221 ttgtagtttt cgatagagat aatgaaaatt tagaatataa attaaaagat ataagaagag
     5281 ttttagaagg tttaggtttc ttatcaagaa ctgaaacaat taattctgta gaagcttatt
     5341 tgggaacttt acctggattt gtttatccaa atttacgccg tcctatatta aataccctta
     5401 acttaacaca tttaattcct ttggcgtctg tttgggcagg agaaaaatat aatccaagcg
     5461 aaagatttcc tccaaattct cctccgctga tgcaagttgt aacttctggc aatacgcctt
     5521 ttaggttaaa tttacatgtt agtgatttag ggcatacttt aatttttggt cctcctggga
     5581 gtggtaaatc aactcttttg gcaaatattt tccttgcttg gcaaaaatat ccaaatgcta
     5641 aaatttacgc atttgataaa ggacaaagct tgctagctcc gacactggca acaggtggaa
     5701 ttcattatga tgtagcagga gatcattcat ctttggcttt tgctcctttg gcaaatatca
     5761 aaacagatgc cgaaatcgca tgggctgaat tttggattga aacatgctta aaattacaaa
     5821 atgtaaatat tacaccaaaa caaaaaaaat taatacatga agccttaatt tctcatatca
     5881 atacaaattc tacctctttg actgaatttg tatcagcttt gcaagatagt gatttaagag
     5941 atgctttaaa ttattataca atttctggaa caggtggttt tttatttgac agcgaggaag
     6001 ataaattaag cttaagcagt atcacaacat ttgaaataga agaattgatg aatttaggag
     6061 atcaatacat aatccctgcc ttactctaca ttttcaatcg catagaaaaa ggcttagatg
     6121 gaagtcctac attactcatc attgatgaag cttggattgc actaaagcac cctgcgttta
     6181 aagataaaat agttaattgg cttaaagttt taagaaaagc aaatgtagcc gttataatgg
     6241 ctacacaaag cttaagcgat agtgcaaaaa gtggaatttt agatattcta caagaatatt
     6301 gccctactaa aatattttta cctaatcccg aagcttataa aaaaggaagt gaaaatgttt
     6361 tagctcctta cgacttttat aaaatttttg gacttaacga tgtgcaaatt agcattatca
     6421 ataatgccat tcaaaaaaga gaatattatt acacctctcc actcggcact agacttttta
     6481 atttggcact cggaaaaact aatttagcct tcacaacaat aagcgacaaa gtaagtgtta
     6541 aaagagtaag acaactttat gagaaacata aagaaaattg ggcttataaa tggttagaag
     6601 aaaaagaaat aaactacaaa agatttgata attcacaaaa ggagcaaata tgaaaaattt
     6661 tatttttggc gtaaaaaaaa ttacattagc tttaagtgca actttattaa ttagcagtaa
     6721 cgcttttgct gatgatattt taacaggcga tacaaaatta gcatgcgagg caattttatg
     6781 tttaagtagt ggcacacgcc cgagcgagtg ttcatcttct ttagcaaggt atttttctat
     6841 taaatttaaa aaaccttgga aaacgattaa tgcaagaaga gcatttttaa atttatgccc
     6901 tatacaaaat gacgcaaaca tagaagattt agtgttaaat aacttagtcg atgatgtatt
     6961 acctgtaagt gatcctaggc aatgcacacc aaattattta aacacgcaag tagaaactaa
     7021 aagaagttat tctacttttg gaattatgag ctatagaatc aatccaaata tgcctaactt
     7081 ttgccacgca ttaatcaacc atgcttatac cgattataaa actccaaaat ataaatgcac
     7141 aggggaattt tacaattcct tagaatggaa actaagtgca aaattacagc ttataactca
     7201 acaagcttat gaaagccttt ctgacgatca aagatatatg atttctcgaa cttgcggaga
     7261 taggaattgt tatgactatt atcaaaaaat accattcact aaagaatgct ggacttacta
     7321 aaaggagtag atatgagcaa tacaagcata atcaacataa acaatcaaga agttattttt
     7381 gaaaacaaag acgaacaagt tttttgcaca agtttagatg tggctaaggt ttttggcaaa
     7441 gagcataaaa atattttaag agatattaaa aacattttaa atgatttgcg agaaataggg
     7501 gatgtgcaat gtaaatccaa ttttgagctt tcattcaaag tccgtaaaat acaaggtttt
     7561 aaaggtagag aaagaaaata tccatattac aacctaactc gcgatggatt ctctctttta
     7621 gcgatgggtt ttacaggtaa agaagcatta caatggaaaa tactttttat cgacgctttt
     7681 aatgaaatgg aaagaattat taaaaatcaa tacacaccaa aactagaaaa ttataataaa
     7741 tataagattc ctaacacatt ctacaaggag atagcatgag caaagttatt ttatttgaaa
     7801 atgaagaatt gggacaagta agaacaatta gagataaaaa taatgagcct ttgttttgcc
     7861 taaatgatat atgcaaaata ttaaatatta aaaaaacaaa tagcgttaga gactctataa
     7921 ataaggagtt cgataaaggg ggcgtttttg agtggcaccc ctttaaaact cttggtggaa
     7981 tacaaaaatt tattgtaata aatgaacctg aactttactt tgtcttaatg agaagtgata
     8041 agccaaaagc aaagcctttt agacaatggg ttattaaaga agtcttacca agcattagaa
     8101 agcaaggtta ttacgcgtct aacaacgcac caaaactaga aaattataat aaatataaga
     8161 ttcctaacac accttataaa gaaaatatta ttaaagcgat tatgcaaacc gaacaaaatc
     8221 gtaattgtga atttgaagag ctaatcgcat atgaaattaa agaaatatat aaagacaata
     8281 aatctcatat cgaacaaaaa attaatttta aagtaaaagg attaatatga aattttaatt
     8341 tttggcgata caaaataaac attaaaaatt taaaagaaag gagaagtaga agtttaagag
     8401 gtaggttacc gcataacccc aacaagtagg gcaaggctaa taagccttga ctattattat
     8461 acataatagt ataataacaa tgattacgcg gtcaatcatg gacataaaat cacccacttt
     8521 cacgggtaaa atttagccat agggggtcag acctacggct aacccttaat gggtattcta
     8581 actaaaacct acttaaactt caaaaatata caaaatgaaa aaaaccaaca tagaaattgt
     8641 ttaatcaatc aaaataaaca ttaaaaatta aaagaaagga gataaataaa gttagtataa
     8701 aagccaaagg gtttctagta acccccttaa agaaagggag aagtcaaagc taataagcct
     8761 tgactattat tatacatagt agtataataa ttactagaat tttgttaatc aaggtttctc
     8821 accttctttc taaggcaagt tttgattaac caaaggctgg aaccctttgg ttaatcagcc
     8881 ttaactgcaa ttatactaac ttatttcaaa attacaaatg aaaaaatctt tatttggcgt
     8941 aaaaaaagcc acttcaacaa taattgcaac tttaattata ggaactaata atgcctttgc
     9001 aggtggtatt cctgtaattg atcttagcgc tattgccaat caagtaaaag attatgcaat
     9061 gcaacttcaa caatacgagc aaatgtattc tcaattgcaa cagcaaatac aaatggtgca
     9121 aatgcaaaaa cagaatttag aaagattaac taaagaagat tgggataact taggaacggt
     9181 tctttatcaa acccgaaatg taatgaacaa agtaaatgga atttcttatg atataggtaa
     9241 tgtttcgcgc aaatttgaag atacttacaa aaattttgaa ggttatagta atgatcttga
     9301 aaacgcaaca aatgaaagcg agagaaataa aatttattct gatagataca agcaaattgc
     9361 ggaaacaaac caaaatacat ttaacggaac attgcaacaa ctcgagcttc gatatcaaga
     9421 tttagaaagc gaagatgcat taatagcgag attaaaagca aattcacaaa attctaatgg
     9481 aaatttacag gttattcaag ctactaatga tcttattgcg tatcaaatcg atgaaataag
     9541 aaaactaaga tcggttatta tggatcaaag caatatgctt actaattatt tagcgtcgca
     9601 aaataatcaa aggataatgc aacaggcaaa aatagataaa tttatagaag atacaggtta
     9661 tattgaaaaa acttggggta aatcaaaccc agacgctctt aaatggaaat aaaatgatgt
     9721 taaaatattt tgtttctata ttaaataagg agaaaaacaa tgaaacattt tatttttggt
     9781 ggtttattag gtttaggtgc tttggctttt ttagcaggtt gtggcgatga ggcaaaaaca
     9841 aacgattatt ataaaacgca cttagatgag gcaaaggcta gagttgcaga atgtaaaaaa
     9901 atggagaaaa tgaatgaaac tcaacaaagg gattgttcta atgcaaaatg ggcggttgaa
     9961 acagaagata caggttatat tgaaaaaact tggggtaaat caaacccaga cgctcttaaa
    10021 tggaaataaa ctagcaatta tctttttaat ctttcttgct ccaaatttag cttttggagc
    10081 tgaaagtgcg gaaggcgttt taagcataat acgcaatggg cttttatctt ggacgcctct
    10141 tattaaaacc gcttgtttat gggtattttg gactttagtt attattgatt tagtttggac
    10201 ttttggttta aaagctttaa gcggttttga atttggcgat tttatagcca ctcttattaa
    10261 aaaagtaatg tatataggta tattcctact tttatttaat atcgatcaat ggttacaaat
    10321 tatttttaat agtttttcac aattagctac aagcgtaaat aatggcacgg cagtttcgcc
    10381 taacaatatt ataattcaag cattatctat tgtaagaaaa attattcaat ctatggattt
    10441 ttggagtcct ggtgattcaa tattaaaagt tatagcgggt gtgattattt taatagcttt
    10501 tgttttaatg gctattgatt tacttattgt ctatttaaaa tttttcttaa tgaatgtaat
    10561 tgtatttttt gctttggcgt taggtggctt aagtcatttc aagcaaatag gcttaaatcc
    10621 aataacgaca gctattaagg taggtgtgga actttttatg atacaaggct taatggctct
    10681 ttgtattaac atgatagata caatcaataa tgaaataaca caaaattcga gtgttgaaat
    10741 aattttaaca attctaacca ctgccttaat cttctgcatg attacaaaaa tggttccggg
    10801 aattattgaa gctgtattta atggtagtat tggagaaagt gcaggagctg ctgcaggttt
    10861 tagggctgtt gccaccatgg cagcaggggc tgctacgggt gcagctgtag gagctgtcgg
    10921 tgttactcgt gccatgaacg cagctaaaga gttgcattta gcagaaggtg gtaaaggtgg
    10981 aatggatcta gttaaaggcg tagcaaaaca tttagcaact tctggaggag agcatttaag
    11041 agataatctt acaaaaggca gaatgcctca tcaaatggct aatcgcttac aagaaaaact
    11101 taaagatata caaggaaaag caagtgaagg cggtatatca tctggaacac caaaagaaga
    11161 aagttatcaa tcaggagtaa atcctaatgc tatgtaataa taaaaccaat gcaagggtgg
    11221 taagttcttg caaaagttcc attatggact cctacttatt tggtttccac ccacacaccc
    11281 aaccaaatag ccaaaaaaaa gctcgatttc tcataagaga accgagctta aaccaaataa
    11341 acaggttgtg aaacttttag tccatctacc aaatggataa attaattata tcataaaaag
    11401 gagtaaaaaa ataatgaata tttttaggca aaagcaaaag atagaaaaga atgagtttga
    11461 cacttcaagc aatccttatc ttaatgcaaa aaccgaatgg ctagaaagat acggcgatta
    11521 tatcactcgt gctaaaaact ggcaaattgt agcgataatc agcttagcta tgtgcttttt
    11581 atgtgttctc tttataggct atatcggctc tcaaaacaaa cttatacctt atattgtaga
    11641 agttgataaa ctaggaaata cagctaaagt aggcatggtt caaaatattg atttaaagaa
    11701 tccaaatgtc ataaagtata gtctaaatac tttcatttat tcttggcgtt ctgtttgggg
    11761 gaatccacaa actcaaagaa aatttatatt tgatgcttac acatatgtag aaccaaaatc
    11821 taaagcattt aattttttaa atgaagaata tcgtaaaaat aatccttttg aacgagcaac
    11881 taaagaaaat gtgcgagtta aaattaaaaa tattgtccct caaaatattg atacttggca
    11941 agttgaatgg gaagaaacaa ctacaaattt aaatgaagat attctttcta aggaaactta
    12001 tagaggatta ttccaaatca aacaaatcgt tcctacaact gaagaacaaa ttttaaaaaa
    12061 tcctttaggg atttttatta cagatcttaa ttttgcaaaa attttataag gagattaaat
    12121 gaaaaaaata atattactaa gttctttaat agcaacttct ttatttgcta ataacctaaa
    12181 tgaaagagat tttgcaaatc ttacaccaaa agaaaaaaaa gatttagcaa tagctcaaaa
    12241 atggataaat tcaaaaacca ctactataca aggaaataat ggagaagtaa tttttcttta
    12301 tggcgaagct atgccaagca ttgtaactgc acctttaaga cttactgata tttctttaga
    12361 acctggagaa gtgattaaag atgttcaaat aggcgatagt ataagatggg ctatatcttt
    12421 aagtattagc ggggaagaac cttatttagt ttctcatatt atcgttaaac ctacggataa
    12481 aaacctacaa acaaccatga acataatgac aaataaacga gtttatcgct taaatttaat
    12541 atctgaagct aagaaattta tgcctgcagt ttcattcaat tatacaaatc aaatcattca
    12601 tacactagaa gattataaaa accaaatgaa agcaaaatct gaagctaaaa atttctataa
    12661 aacaaaagat gatgaaattc caagcaatat tgaaaattta gactttggtt atagtattga
    12721 aggtaatgca ccttttaaac ctttaagaat ttacaatgac ggcataaaaa cttatattca
    12781 aatgccaaaa aatttaaaat tctatgaagc acccgcactt atggttttag attctagtaa
    12841 tgaaaaacaa attgtaaatt atcgcttaaa atatgataca tttattgtag atagactttt
    12901 taataaagca attttacttt caaatgtagg ctcaaaacaa gaaaaaatta caatcacaaa
    12961 gcattctaac aaggctaatc aagatatagt caataatgtg ctttacgatt tatcacttca
    13021 aaataaaaat aaaaaggata ataaatgaga attttatttt tggcgttaat cgctttattt
    13081 ataacttcat gtgcaaaagt caattcagaa tattttactt ctagcttttc ggttaaagaa
    13141 acaaaaataa actacgacaa aatcgctgat gatttttcgc aatttatcat ttcgtattat
    13201 ttgcctaaca aaactacatt ttatttcaat gatataaatg acaataaagc attttcggat
    13261 tattttgtaa atacattaag aaataaaggt tatgcaatta gcaacgatca ttcgagaaaa
    13321 aatttaacct ttctaagcta tcaggtttcg caaattgaca atgaaaatgt aattgcaata
    13381 tttaatatca atgaaagtaa aatcaatgtg atttataaaa tcattgaaaa caagcttgta
    13441 aaaataaata tgacaagttt taattttact ccgcaaaatt aaaggttgaa ttatgctcga
    13501 aattaatact tcaccaaata aatttttacc aaaaaataat aaaagacttt ctaaagtccc
    13561 tattataata ttatttacta ttgctgtaat cgtattattt agcgtatttt atgtagcttt
    13621 atcaagaaaa caaaatttag aaaagcaagc tacacaaact gcaccaaaag aagaaacaca
    13681 aagcacaagt aaaattgaaa atattgcttc ttatgttgat gaattatcac aaactaaaca
    13741 aataaaagaa caaaactcaa ccttacagcc tgttaataat actatcccta tcactcaaca
    13801 agttcagcaa gaaatcaagc ctcaacctat acaaacacct attcttatgc aaaataatga
    13861 aatagatgaa agagaattaa gattaaaaaa agatatgcaa cttaaagctt taatcagcca
    13921 aacttcttta gggattaaaa gtgaaattca agaaaaacca acaataggta atcattttac
    13981 cccttctcaa accgattacc ctaatattcc aaatgatcaa gtcaatacaa gtgcaggatt
    14041 aggtggatta gataccagtg caaataaaga tgcacaaggt cagcaatttt tatcacaaaa
    14101 aaatgacaat gggtatttaa aacactcaaa acaaaaacca ttaagtcctt atgaaattaa
    14161 agcagggtgg aacattcccg ctgttttaat cacaggagtt aattccgatt taccaggtca
    14221 aatattggca caagtaacac aaaatgttta tgatacttca acaggtaaat atcttttaat
    14281 cccacaaggc actaaagttg taggagctta ttcaagcaat atcatttatg gacaatcaag
    14341 gcttttagta gcttggaata agcttatttt tccaaatgga gatacattaa atatcgatag
    14401 tatgcaagga acttcacaag atggatatac aggatttgaa gatgaagtag ataatcatta
    14461 ttttagaatt tttggttctg catttttact ttcttcaata actgcaggaa ttgcattatc
    14521 tgataattct agcacaaacg gagaaaaaga aaccgcttcg gataaggcta tttcccaagc
    14581 aattcaacaa atgggacagg tcgcaagtga gatgataaga aaaaatatga atgttagccc
    14641 tactttaaaa attcgtcctg gatataaatt taatatcttt gtaactaaag atattatttt
    14701 agaacccttg gagcttagat aatggataaa ttgttaaaag agcgtagaat tattattttt
    14761 ggtaatttat tttgtatttt tattttggtg ttttttactt atattaattg gaacaatttg
    14821 tcaatgttaa ttcctgcttg gattgttata agtattttag aaataatttt aatgattgct
    14881 tatttttaca ataaaaaagg cattcaaaat tataaaaata atattgaact ttataaaaat
    14941 ttagcaaagg atttaaacaa tgattgatat tgctttaatt gaacaatgca aaaatccaaa
    15001 tgtagaaaca caaatcatac aaaaaattat tcaaatagaa agcaataatc aacaatttgc
    15061 aattaatatt aataaaatag gatctttcat tccaaaaaca aaagatgaag caaaaacact
    15121 aacgcaaagt tttatcaaca aaggttatag cgttgatatt ggcttaatgc aatttaattc
    15181 aaataatctt aaaactccta catttaaaaa ttatagcatt gatgatcttt tagatccatg
    15241 taaaaatatt aaagcgggta gtgatatttt ttatttggcg tatgagatga caaatgaaaa
    15301 tctagcaaag gaggagcgta tcaatcaagc attaagtatt tataatactg gggatttaaa
    15361 aaaaggattt tctaatggct atgtagctaa atacgattca acagcaaaaa ccatagataa
    15421 tttagaagaa aaagcaagaa aatcggatac gagaattaag attgcttata atcttttcaa
    15481 tttacaaaca caaaaaaagg agtaaaaatg gaaaatgaaa atttggaaga gaataaacct
    15541 acacaatttg atgataatga gccaagctta tttgataact tagaagatga ggaacaagat
    15601 aatgattaat aatattacaa taggcggaag attaacagct gacgctgaat taagacacag
    15661 taatcaaggt agcataatat gcacttttac tttagcaaat aatagaaaat ataaagagat
    15721 agagaattca acttatatcg aagtatctct ttttggttct tttgctaatg ccatgcaccc
    15781 atatttaaaa aaaggcattt cagttgatgt ggttggagaa ctaactcaag acacttggga
    15841 gcatgaagga aaaatttact caaaacaccg aataaaagca aaagagatag attttagaac
    15901 accaaaaaaa gaaaaacaaa caatacctaa tattgaagaa ggagaaaatt atgaaggatt
    15961 ttaaagaatt agaaacaata ccaaatttca gctatgaaat tgatccgcta actgctgaag
    16021 aattaggtgc atttgaagaa aatgctttaa gtgaagaaga tgccaaagaa ggcatagaag
    16081 atcaaggata actctatgaa aaacaaagac tttatccaag aaacagctga taaaattata
    16141 gaaagtttaa aaaatggaac tgcaccatgg attaaacctt ggaaaggtat cgatttagct
    16201 aataacatgc cttataatcc tattacaaat aagccttata atggcataaa tagtattaat
    16261 ctaatgctac aaaattatag tgatcctaga tggcttactt ataaacaagc acaaagtatt
    16321 aatgcacaag ttaaaaaggg tgaaaaatct actttaattc aatattggca atttagcgaa
    16381 atagttgata aattagatga agaaggcaat gttatcacaa atgaaaaagg agaagtagaa
    16441 caaatcgaaa taaaattaga aaatcctaaa gtatttttcg cttatgtttt taacgctgaa
    16501 caaatcgaaa atatgccaaa actagaacca aaacaagaaa ttgataattt tcaaataatt
    16561 aaagaggcac aaaaaatttt agacgattca aaagcgatta ttcatcatca aggaaataga
    16621 gctttttata atgctacaaa tgatactatt acactgccac caaaagaaaa ttttttaaat
    16681 gaaagtgctt attacgcaac tgctttacat gaattaggac attggagcgg tcattcaagt
    16741 agattagata gagatttaaa caatcctttt ggttctaaag aatatgccaa agaagaatta
    16801 agagccgaaa ttgcaagttt tctatttaat ggtaaaatag gcttagatta tgatccagga
    16861 caacacttat catatattga tagttgggtg caaattttag aagataagcc aaatgaaatt
    16921 tttaaagcca cttcagacgc taccaaaatt gttaatttta ttgaaagtct ttctttggag
    16981 caaaaacaaa aaatagagct tgaaaattca aatactcaaa atcaagcgct taaacaagat
    17041 aaggagttaa acttggcaac tagaaaaact tacttatatg ttccttttga ggaaaaagaa
    17101 tttgctaaaa aagcaggtgc aaaatgggat aaagaagcta aaatgtggta tgctcctaag
    17161 ggtgcggatt taaaaaattt cactcaatgg ctaaatcaat caccattaac acaaagttac
    17221 aacaatactc atgatgaatt taaagctttt ttagaaaaat atgagcttaa tattgaaggt
    17281 cagcctataa tggacggcaa acttcataga gttagcgtta taggggataa agggagagaa
    17341 aaaagcggag cttatgtagg ttttttaaat ggacaccctg caggatttgt gcaaaattac
    17401 aaaactggta ttaaagaaaa ttggaaaagt gctaattctt tggaaaacac caaaaataaa
    17461 gaaataaatc tgcaaaacgc tttagaacat aataaagcct taaaagagca aagagataaa
    17521 gaattaaatc aagcgtatga aaataccgct gtgaaattag aaaatgaata caacaatgca
    17581 agatgggcta attcagaaca cccgtattta aaagaaaaag gctttgataa aaatttttat
    17641 ctcaaacaag acaaaaacgg caacttattg attcctttaa gagatattga aggcaaatat
    17701 tgggctacgc aaagaatctt cgctaatggt gataaaatga taggagctac acgcacagca
    17761 gaagaaaaag agcaaggcat agaataccct gcgaaaaagc aaggtaattt tttcttactt
    17821 ggtgcaaaga atttaaataa tgtcaatgaa gtttatattt gtgaaggatt tgcgacaagt
    17881 gctagtgtct atgaagctac aaaatctcct actataatgg gagtagatgc tggaaattta
    17941 gaaattatcg taacaaatat aaaagaaaaa taccctaaaa tgaatatcat tattgcaggg
    18001 gataatgatg taaaaaaaga attaaacggc aataagaatg taggcaaaga aacagcctta
    18061 ggcatacaaa aaaaatatcc cgaagtaaaa gttgtattac caaattttac aaatcaagaa
    18121 gcgcaaaaag gtttaagtga ttttaacgat ttaatgaaaa gcagaggatt ggaagaaatt
    18181 aaaaagcaat taaaagaaca aattgcaaag caactaatgg ttgaaaaagc cactactaaa
    18241 gcgctagata aaaataaagg tatcaataaa gagataacag ccaaaaaaga tatagggatt
    18301 tctttatgaa aaaacaaacc aatcaaactt tagtttatat attggcaata actggtatct
    18361 taatagcatt tatcataata agccaaattg caacgcaata tttggcaaaa tcttttaatt
    18421 actctcctag tttaggtgaa actttacttt atggatttta taatcctttt aagtggattt
    18481 cttggagtta tacttattat tctttttatc ctgatttttt caaaaaattc ttcatggtaa
    18541 tgtttgcagg tattgcattt tgttttattg tttttatttt ggtgaaactt gcctttttgc
    18601 gtaaagcaaa agcaatagaa aatcttcacg gatcggcaca ttgggctact ttagaagaag
    18661 ttaaagaaag cggtgtattc gataaagata aaggcgtgta tattggtggt tttgaacaca
    18721 aaaaaacact tcattattta agacacgatg gtcctgaaca tgtaatgctt tttgcaccta
    18781 caagaagcgg taaaggcgta agcttacttt tacccacact cttatcttgg ggcgaatccg
    18841 ctcttatatt tgacataaaa ggcgagttat gggctttaac tgcgggttgg cgacaaaaat
    18901 acgccaaaaa taaagtatta aaattagatc ctacttgttt agatgatagt gccgtaaaat
    18961 ttaatatttt agaagaaatc aggttggaaa caatgcacga gattaaagac actcaaaata
    19021 ttgcaattaa tctcattttc aaaggcgaaa cgccccctac taatcctact caaggtagca
    19081 cctcttactt taaaagtgag gcgggaaatt tcttagtttc aattatactt tatgctttgc
    19141 atttaaaaaa atgtcaagga aagaatactc caaatctaac cgatatttat aaatttatta
    19201 atgatccaaa tcaaagtatc gatgagctat tagaagaaat ggttgaatgc gatatttcca
    19261 caatggataa aaatacacaa gaaattatac aaagtatttc aagatcaatg aaaaataaag
    19321 ctacacaaga attaagcggt gtagtaggaa cagcttcgga agctttaaat ctttatattg
    19381 atcctatttt ggcaaaaaac acagcaaaaa gcgattttaa aatcaaagat ttaatgaatc
    19441 atgaaagccc tatcagtctt tatttaatca ttccgccagg gcaaaaggat agattgcgtc
    19501 cattttttaa tttacttatc aatcaaattt ttagaacttt aactgatgat tctttgaatt
    19561 ttaaaaatgg agaaaatata aaaagataca aacataaaat gttagtatta gccgatgagc
    19621 taactatgtt tggaaagtta tcagtgcttg aagaaaatct tgcttatatg gcaggatatg
    19681 gaatgaagtt ttacggatct attcaagata tacaacaact ttattctatt tatggcgaaa
    19741 aggaaacaat catttcaaat tgccacataa gaatagcatt tgcaccaaac aaaatagaaa
    19801 ccgcaaaact cttatccgaa atgggcggaa ttacaactat tattaaaaaa tctcttacaa
    19861 gctcgggaaa aagaaccgct gtaatgcttg gcaatgtaag cgaaacaata caagaggtgc
    19921 aacgcccttt aattactgcc gatgaatgta tgcgattacc ttcagctaaa aaagataaag
    19981 atgacaagat aatcgctcct ggtgatatgt taatttttat tgcagggcaa gcccctattt
    20041 atggaaaaca aattttatac tttaaagatc ccgcattttt agcaagatca aaagtaacac
    20101 tagataaaca agtcagcgat attttataaa ggagtaaaaa tggcaaaaat acattttgtt
    20161 ttaaatggta aaggtggtat aggaaaaagc tttataagct ctttactatg tcaatatttt
    20221 ttagataaag gagaaagtat agtcgctatt gataccgatc ctaataatac aactttactt
    20281 aatgtaaaag ccttaaaagc taaattcttg caacttattg atgatgatgg caaatttgat
    20341 gtccgtgctt ttgataaaat tgtagaatta gcttttgaaa aaaaggctga aaactatatt
    20401 attgatagcg gtgcgactac ttttatacct ttaattgatt atcttaaaga aaatgaggtt
    20461 ttagactttt taacaaacaa taatttagaa gtttatatgc atgttccaat tgtaggtggt
    20521 caagcaagag atgataccat tttgggatta acacaactca cacaagcttt taattgctct
    20581 tttgtggtgt gggttaatga atatcacgga tcaattatca aagatgattt cgagtttgaa
    20641 gaaactaaag aatatcaagc tatcaaagaa aaaatcaaag ctattattta tcttaatgct
    20701 ttaagtaaag atactttcgg caaagatttg ttagaactca cttccaagaa tttaactttt
    20761 ggtgaagcta tgcaagataa aaacttttct ttaatgtcga aacaaaggct taaaattttc
    20821 aaagataaag cat
//
LOCUS       DBBXOW010000027        20164 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.028, whole genome shotgun sequence.
ACCESSION   DBBXOW010000027 DBBXOW010000000
VERSION     DBBXOW010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20164
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.028"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..1695
                     /locus_tag="ACJE1S_000936"
     CDS             <1..1695
                     /locus_tag="ACJE1S_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806498.1"
                     /translation="KFIDTDYKLLEKELEELSKKDELRLEVDQGLDQTLRDLEIISAK
                     IPQEETQKLFDQCANNAMDAVMGHFGFAAVILDAKDGGNVNTTHNVRNGFYASEKEKQ
                     RYANRGKYDSDNYHQDDNYKRINKEQNVLKKQGKLEDYMTGKKINANADTDLDHIVAA
                     KTIHDDPARVLAEIDGAKLANTESNLKMTDSSLNRSKKDKSAEKFLADRDKRLKFLAE
                     KEKNGALTPSQQKEKEKLLKQKEIQDEKFKEQYEQNEKEINREVDKTYYTSSKPYKEA
                     LITGTQDAAKIAVYSALGVVLKDFIKAIIIELKVTFKEFGNESLKEILVRFKDRFCKV
                     WEELKLKWKDILKNSLEGALQTFFSNLVVFIINIFATTLKKIVQIIRAGFTSLWQAVK
                     IITNPPKDIPKEDIYYEASKIMVTGLISATAMLGSETLNKLLTSVPILGPVMQFPIPF
                     TGEKNDQGELVNFQTIGDALSLCITSACGAVLSTIAIFYMDKWRNDSKIGSLQIQLVA
                     QNGVVMHYKIAQTWFVLGDAYNLFGQVMERGSQNLVILKNKVNQVQNKLKQAEGER"
     gene            1749..2339
                     /locus_tag="ACJE1S_000937"
     CDS             1749..2339
                     /locus_tag="ACJE1S_000937"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806499.1"
                     /translation="MDNKRLVINPKKNLQNLKEIGEIQGQIKNCTPEELQILAKDQVK
                     QIDMKIQEASRKIVRAKELAYKAKNIENSFFETLNPFAKSETDKKLEALSEADIANAE
                     AIGAQNELIQETIKLICCDMVFADLMINELSLMIYEKYEINEEAILSLSNDTKKLVKK
                     LQQRFFIKQNNALLKCKRQNKKYKKPKKILEIWKMI"
     gene            2324..2587
                     /locus_tag="ACJE1S_000938"
     CDS             2324..2587
                     /locus_tag="ACJE1S_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806500.1"
                     /translation="MEDDIKELEERLNKKRQIDDEQHKLIETHYQEFINFKMQMENDT
                     KEKENKISDLKFKISKKNTAFSIIISSLALIVSIVAIILQFIK"
     gene            2601..3089
                     /locus_tag="ACJE1S_000939"
     CDS             2601..3089
                     /locus_tag="ACJE1S_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806501.1"
                     /translation="MGFLDSLKEKALEASEAVKEKTTSATEAIVDTALKIKCATNWHA
                     GEFNNEEGKPECFFSKVCPDCGKYITKTKHFFNEPPVIEDPNRCYRYRVCELCGFKQS
                     DYFHNYERADKNEQCVIIERCSLCGHERFGKPEHEWIHNREGDAFFKICRDCHIKIRV
                     YE"
     gene            3092..3953
                     /locus_tag="ACJE1S_000940"
                     /pseudo
     CDS             3092..3953
                     /locus_tag="ACJE1S_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812994.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            4019..4237
                     /gene="infA"
                     /locus_tag="ACJE1S_000941"
     CDS             4019..4237
                     /gene="infA"
                     /locus_tag="ACJE1S_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HGG0806502.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            4408..4521
                     /gene="rpmJ"
                     /locus_tag="ACJE1S_000942"
     CDS             4408..4521
                     /gene="rpmJ"
                     /locus_tag="ACJE1S_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HGG0806503.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            4524..4889
                     /gene="rpsM"
                     /locus_tag="ACJE1S_000943"
     CDS             4524..4889
                     /gene="rpsM"
                     /locus_tag="ACJE1S_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HGG0806504.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKTGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            4899..5291
                     /gene="rpsK"
                     /locus_tag="ACJE1S_000944"
     CDS             4899..5291
                     /gene="rpsK"
                     /locus_tag="ACJE1S_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HGG0806505.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            5321..5947
                     /gene="rpsD"
                     /locus_tag="ACJE1S_000945"
     CDS             5321..5947
                     /gene="rpsD"
                     /locus_tag="ACJE1S_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HGG0806506.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARRDGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHILVNGKRVDIPSFRVEAGAKIEVIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVIIPVEERFIVELYSK"
     gene            5961..6974
                     /locus_tag="ACJE1S_000946"
     CDS             5961..6974
                     /locus_tag="ACJE1S_000946"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HGG0806507.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKLKSDSNKEIVE
                     FSFKGPKEIYGKDLNNDQVEVVNTDAYLATINEDAELKFTLIIEKGIGYVPSEEIKEL
                     LNDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSIIKSQATSNELENTKLLQNITDLNLSARSYNCLEKAGIVYI
                     GELALMSVNELAGLKNLGKKSLDEIKSIMESIGFPVGTSKLSDNKDLLKKKIDELKAQ
                     NEG"
     gene            6978..7331
                     /gene="rplQ"
                     /locus_tag="ACJE1S_000947"
     CDS             6978..7331
                     /gene="rplQ"
                     /locus_tag="ACJE1S_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HGG0806508.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFAALQDKNATNKLVTEIAPNFKERNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
     gene            7549..8448
                     /gene="hisG"
                     /locus_tag="ACJE1S_000948"
     CDS             7549..8448
                     /gene="hisG"
                     /locus_tag="ACJE1S_000948"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HGG0806509.1"
                     /translation="MQENSRLRIAIQKSGRLSKESVELLNKCGIKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERKSLGEEANYKLLTKLDFG
                     YCRLSLALPQEKKFDNLKDFENLRIATSYPQLLKRFMKENNIHYKNCMLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYQSRACLIQKQNTLSDEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQSLLPGVEKPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            8456..9742
                     /gene="hisD"
                     /locus_tag="ACJE1S_000949"
     CDS             8456..9742
                     /gene="hisD"
                     /locus_tag="ACJE1S_000949"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HGG0806510.1"
                     /translation="MQIINFNELDEKQKQEVLKRPAIAAKDEISQIVSSIIKEVREKG
                     DEALIEQALKFDKAQISSIKVSEEELENASLRLDKDLKEAILIAYENIKKFHEAQIPK
                     EIAIETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAQCEKIVLASPA
                     KINDATLFCAKLCGVDEIYQMGGAGAIAALAYGTKSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADEKANVKFVASDLLSQAEHGADSQVILVCLSKEFAQ
                     GASDEVSRQLENLPRKELASKSIANSKIIIAKNLDEALLISNLYAPEHLIIQTQNPRE
                     LLDKVKHAGSVFLGELSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMSVQEL
                     SKEGFLNLGKSVEILAANEHLDAHKNAVTFRLESLK"
     gene            9739..10800
                     /gene="hisB"
                     /locus_tag="ACJE1S_000950"
     CDS             9739..10800
                     /gene="hisB"
                     /locus_tag="ACJE1S_000950"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HGG0806511.1"
                     /translation="MSEKILFIDRDGTIIEEPKSDFQIDSLEKLRFEKGAIPTLLKLK
                     NFGFKFVLVSNQDGLGTQSFPKEDFEIAHQKMLDILQSCGIEFKDIFICPHFENENCE
                     CRKPKTALLDEYIKHNLYNKEQSFVIGDRDTDMILASNLGVRGLKYSENLTWKEIEEE
                     ILNSFRTASISRITKETNIHVKVCLNGGKIAINTGVPFFDHMLEQIAVHGGIGLEISC
                     KGDLEIDEHHSVEDVALALGSAIKQALGDKIGITRYGFVLPMDECLASCAIDFCNRPH
                     LVYKAKFKKEKLGELSTEMIEHFFYSLSYSMGVSLHLKVKGKNDHHKAEGLFKAFAKA
                     LKMAVKIESENLASSKGVI"
     gene            10797..11384
                     /gene="hisH"
                     /locus_tag="ACJE1S_000951"
     CDS             10797..11384
                     /gene="hisH"
                     /locus_tag="ACJE1S_000951"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HGG0806512.1"
                     /translation="MKLIIIDTACANLASLKFCLDRLGFNAKISRDLKDLENADKLFL
                     PGVGTAAKAMSNLESFNLTNFIKNTKKPLLGICLGMQILGDFSEELDQETLGIIPFKT
                     QKFELPKEYSLPHMGWNEVASSHPLFKGLNGAYFYFVHSYHVALNDYTIATSDYGVKF
                     SASLAKDNFYGVQFHPERSGEAGEILISNFIKDIA"
     gene            11381..12109
                     /gene="hisA"
                     /locus_tag="ACJE1S_000952"
     CDS             11381..12109
                     /gene="hisA"
                     /locus_tag="ACJE1S_000952"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HGG0806513.1"
                     /translation="MIIPALDLIDGQVVRLVKGDYEQKKVYKYDPLEKFREYENAGAT
                     WLHLVDLSGAKDPNKRQLALIEKLTNEVSVNLQVGGGIRTKEEIQALLDCGVKRVVIG
                     SLAITNPTLCVEILQHFGSEAIVLALDTILKEDYMIAINAWQDTSDKRLLEVLEFYNI
                     KGLKHILCTDISRDGTMQGSNAELYALIHKNFPKIHTQASGGVASLKDLKKLKGICSG
                     VIVGKALLDGVFSVEEGIKCLQNA"
     gene            12091..12858
                     /gene="hisF"
                     /locus_tag="ACJE1S_000953"
     CDS             12091..12858
                     /gene="hisF"
                     /locus_tag="ACJE1S_000953"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HGG0806514.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIVELAKRYSQSGI
                     DELVFYDIAASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPNLITRLAKSFGVQCVVVGIDSFKDENGNLKVFKYTGDENTSKHSGKNTIE
                     WIKEVQDLGAGEIVLNMMNQDGVKNGYDLEQLSLVKKECKVPLIASGGAGKMEHFLEA
                     FEIGVDGALAASVFHQQIIDIKELKNYLKTRGVSIRI"
     gene            12861..13484
                     /gene="hisIE"
                     /locus_tag="ACJE1S_000954"
     CDS             12861..13484
                     /gene="hisIE"
                     /locus_tag="ACJE1S_000954"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HGG0806515.1"
                     /translation="MQNFQNLNEKINWQKVNGLIPVIIQDAKSCEVLMLGFMDEKALE
                     KSLESKKVVFFSRTKNRLWMKGEESGNFLNIVDLSLDCDNDTLLILVDPIGATCHIGN
                     ISCFENVSKNADFVFLARLEKLINSRKNADENTSYTAKLFKKGTKRIAQKVGEEGVET
                     ALAATVKDKDELICEAADLMYHLSVLLADANLSFSDVIAKLKERHKE"
     gene            13486..14052
                     /locus_tag="ACJE1S_000955"
     CDS             13486..14052
                     /locus_tag="ACJE1S_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806516.1"
                     /translation="MKNIILGFLIFFIYPALMMFFILMHRKYISEVPMLGFHTNMEIF
                     KRAGIYYFYLLVIHIPLFLVWKKVISRIESLDFINTFYFGIAFSLCVFFLLTLPLDGH
                     LALVPLLCVLFSFVFVFKFIYFCFKKISYFTWKKLIFIITTLLGICAGLAYIFFCLYY
                     QLCIFDNYDFLGKFYNIPSYKRPLNFIF"
     gene            complement(14110..15270)
                     /locus_tag="ACJE1S_000956"
     CDS             complement(14110..15270)
                     /locus_tag="ACJE1S_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrodipicolinate N-succinyltransferase
                     N-terminal domain-containing protein"
                     /protein_id="HGG0806517.1"
                     /translation="MINTKEDFLLLIKQIEQKNGYRKPKAFGIARLDRGQLNKNKILQ
                     ASFALVNYEQNFGSAAIMLEAFMQRGVEIDFEASEFVQILKLEDIDYALACFKPFLEE
                     EGHKNIDILKIIKDKFKDDEFAFVCLFEDKEPLSVESVYLKLYLLSTKKVPLRSLNLN
                     GAFGLLSNVAWSDDKPIELEYLRENEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKILLKDREEL
                     AKLNPYFDFSKEIYKGIELKGLNGLHFRQDSISGAMIVSLNKKAIKLNEALH"
     gene            complement(15292..16398)
                     /locus_tag="ACJE1S_000957"
     CDS             complement(15292..16398)
                     /locus_tag="ACJE1S_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HGG0806518.1"
                     /translation="MKEQILEKLKSVKYPGFDKDIVSFNFVKDIKTENENVIVELEIV
                     SSNPQVSEELRKNIDEALASLNLKNLQIHIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILSHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSAKRYLMA
                     AEKIWQFVEKINNEGGADNSAIQPVMNGKSACSH"
     gene            16518..17633
                     /locus_tag="ACJE1S_000958"
     CDS             16518..17633
                     /locus_tag="ACJE1S_000958"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HGG0806519.1"
                     /translation="MANLSLIMLAAGNSTRFDMGVKKQFLRLGDDPLWLYATRNLSTF
                     YPFKKIVVTSSNTSYMKKFARNYEFVEGGATRAESLKKALEIIDSEFVMVSDVARVLV
                     SKSLFDRLIENLDKADCITPALKVADTTLFENEALQREKIKLIQTPQISRTRLLKQAL
                     NQNLDFTDDSTAISAVGGKIWFVEGEENTRKITFKEDLKKLDLPRPSNEIFCGNGFDV
                     HEFGEERPLLLGGVEIHPTMGLKAHSDGDVLAHSLTDAILGAACLGDIGELFPDTDEK
                     FKNANSMNLLKEAYKRVKELGFELVNIDICVMAQTPKLKDFKEAIAQNIANTLNVDEF
                     RVNIKATTTEKLGFIGRKEGMAVLASANLKYFDWTKI"
     gene            17630..18517
                     /locus_tag="ACJE1S_000959"
     CDS             17630..18517
                     /locus_tag="ACJE1S_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG0806520.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDVGYSCEIINSFDERNPEKYYDI
                     VLLSTNTSNFLKAVTEFKHSIIILLISYISTDTVSNPLKLGACDYIQKPFMIEELIRK
                     IKHYQDFKKLSILNKAYKSYIKSRLQTVKIPEYNYKKLKLPVVLKSNKQSSADAFVFN
                     YINEYDITLSYVDLSVSNSVEKAMKLPTENNLLFLSNFQVLKPLEREKLLEFIKNKSV
                     ILHTNSNIEDLELPCINLSDNEKNIDSNQILTIDEYVKYIILNYQNVFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            18495..19655
                     /locus_tag="ACJE1S_000960"
     CDS             18495..19655
                     /locus_tag="ACJE1S_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HGG0806521.1"
                     /translation="MKSAKKNKSIIIDKNELGILSLIKEGLLGSCTHLMDEHETKQIF
                     KTGKSNNESFPYPLSFAPKVSEEFIKDIRIGSKIDLILDDEIVGNITLKSKFKNDKNF
                     SNIFSPHTCSLDDMGEICIGGEIEIYNSTIQKIKEEFHKTKENLNAHKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVVFLVESFDANGFDFDLKQNYLKKFIQNYLPPDRIFIFP
                     LKDINLFHAHLNPSLESILAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYD
                     IEVIVLPEFVFCDACRMIVSTRSCPHGCHHHLHYNSQSLKELLRAGIVPPAVFMRKEV
                     SSIILSSIFPNRFKNLQKIYNDLFATDGILEYKSDEEFYQKLLETHQMSYMV"
     gene            19665..>20164
                     /locus_tag="ACJE1S_000961"
     CDS             19665..>20164
                     /locus_tag="ACJE1S_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HGG0806522.1"
                     /translation="MQKLFLTFFYSGCAKKAPGTFGTLAALIPAFFILKYLGITTLFL
                     LSILIFIASIRVIDDYERKTGIHDDKHIVIDEVAGVFLACAIAASGANSLLNFFMAFV
                     FFRIFDITKPSIIGKIDKKTKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFDLVFWDK
                     DLINLF"
BASE COUNT         7439 a         2961 c         3556 g         6208 t
ORIGIN      
        1 aaatttatag atacagatta taagctttta gaaaaagaac tagaagaatt atctaaaaaa
       61 gatgagttaa ggcttgaagt tgatcaagga ttagatcaaa ccttgagaga tcttgaaata
      121 ataagtgcta aaataccaca agaagaaaca caaaagcttt ttgatcaatg tgctaacaat
      181 gcaatggatg cggttatggg acattttgga tttgcggcgg tgattttgga tgctaaagac
      241 ggaggaaatg ttaatactac tcataatgtt agaaatggtt tttatgctag tgaaaaagag
      301 aaacaaagat atgctaatcg cggtaagtat gattcagata attatcatca agatgataat
      361 tataaaagaa ttaacaaaga acaaaatgta ttaaaaaagc agggaaaact agaagattat
      421 atgacaggta agaaaatcaa tgcaaatgca gatactgatt tagatcatat agttgccgca
      481 aaaacaatac atgatgatcc tgctagagtt ttagctgaaa tagatggtgc aaaattagcc
      541 aacacagaaa gcaatttaaa aatgacagat agttcattaa atcgctctaa aaaagataaa
      601 agcgctgaaa aatttttagc agatagagat aaaagattaa aatttttagc agaaaaagaa
      661 aagaatggag ctttaacgcc aagtcagcaa aaagaaaaag agaaattact aaaacaaaaa
      721 gaaattcaag atgaaaaatt taaagaacaa tatgaacaaa acgaaaaaga aattaatagg
      781 gaagtagata aaacatacta tacaagctct aaaccttata aggaagcatt aattacaggt
      841 acccaagatg ctgctaaaat agctgtttat tcagccttgg gtgttgtttt gaaagatttt
      901 attaaagcta ttatcatcga acttaaagtc acttttaaag aatttggcaa tgaaagctta
      961 aaagaaattt tagtgcgttt taaagataga ttttgtaagg tttgggaaga attgaaactt
     1021 aaatggaaag atatcttaaa aaactctctt gaaggagctt tgcaaacatt tttttcaaat
     1081 ttagtggtgt ttattattaa tatttttgct actacactaa aaaaaatcgt gcaaattata
     1141 agagcgggtt ttacatcttt atggcaagca gtgaaaataa taacaaatcc cccaaaagat
     1201 atacccaaag aagatattta ttatgaagct tcaaaaatta tggttacagg gctaataagt
     1261 gctactgcta tgctagggag tgaaacatta aacaaattac ttacatcagt tcctatacta
     1321 gggccagtga tgcaatttcc tattccattt accggagaaa aaaatgatca aggagagctt
     1381 gtaaattttc aaactatagg agatgcactt tctttgtgca ttacttcagc ttgtggagcc
     1441 gtattaagca ctatcgcgat tttttatatg gataaatgga gaaatgattc taaaataggt
     1501 agtcttcaaa ttcagcttgt agcacaaaat ggtgtggtaa tgcattataa aatcgcacaa
     1561 acttggtttg ttttgggtga tgcgtataat ttgtttgggc aagtgatgga gcgaggaagt
     1621 caaaatttag taatacttaa aaacaaagtt aatcaagttc aaaataagtt aaaacaagca
     1681 gaaggagaaa gataagaagc aatatctgac tgcattaaac aacttgaaaa tttaagagga
     1741 gaataaatat ggataataaa agattagtaa tcaatccaaa gaaaaattta caaaatttaa
     1801 aagaaattgg agaaatccaa gggcaaatta aaaattgcac tcctgaagag ttgcaaattt
     1861 tagctaaaga tcaagtaaag caaattgata tgaaaatcca agaagcttca agaaaaattg
     1921 ttagggctaa agagttggct tataaagcta aaaatataga aaattcattt tttgaaactt
     1981 taaatccatt tgctaaaagt gaaacagata agaaattaga agcattatct gaagccgata
     2041 tagcaaatgc tgaagctata ggggcacaaa atgagcttat acaagaaact attaagctta
     2101 tttgctgtga tatggttttt gcggatttaa tgataaacga actgtcatta atgatatatg
     2161 aaaaatacga aattaatgaa gaagctatac taagtttatc aaatgataca aaaaaattag
     2221 taaagaaatt acaacaacga ttcttcatca agcaaaacaa cgcattactg aaatgcaaaa
     2281 ggcaaaacaa gaaatacaag aaaccaaaga agatattaga gatatggaag atgatataaa
     2341 agagcttgaa gagagattaa acaaaaaacg acagattgat gatgaacaac acaaattaat
     2401 agagactcat tatcaagaat ttattaattt taaaatgcaa atggaaaatg acacaaaaga
     2461 aaaagaaaat aaaattagcg atttaaaatt taaaattagc aagaaaaata ctgcttttag
     2521 tattataatt tcgagtttgg ctttaattgt tagtattgtt gcaataattt tacaatttat
     2581 taaatagcta gggagttttt atgggatttt tagatagttt aaaagaaaaa gcgcttgaag
     2641 cttcagaagc agtaaaagaa aagacaactt ctgcaacaga agctattgtg gatacagctt
     2701 tgaaaattaa atgcgcaact aattggcatg caggagaatt taacaatgaa gaaggcaaac
     2761 ccgaatgctt tttttcaaaa gtttgtcctg attgtggaaa atatattaca aaaaccaaac
     2821 attttttcaa tgaaccaccc gtaatagaag atcctaacag atgttataga tatagagtat
     2881 gtgaattatg tgggtttaag caaagtgatt attttcataa ttatgaaaga gcggataaaa
     2941 acgaacaatg cgttattatt gaaagatgta gtttgtgtgg acatgaaaga tttggtaaac
     3001 cagagcatga atggatacac aatagagaag gtgatgcttt ttttaaaatt tgtagagatt
     3061 gtcatattaa aataagagtt tatgaataat tatgacccac gataaacttg cagtgcgttt
     3121 agcgcaaatt ttaatgcgtt ttaataatgg aggaaggttt agcctagaag aattagcaag
     3181 tgaatttaat gtcgatatta gaaccataca aagagattta aaccaaaggc tttcttttat
     3241 gcctattaaa aaagaaaatg gaaagtattt tttagaatct tttgcactcg gcaaacttag
     3301 tgttaaagat atacaaaatt ttgccatgtt aagcgggatt caagaacttt atccaaagct
     3361 agatgaggat tttataacag atctgctaaa ctctaaagta aatagcattt ttatgatcaa
     3421 aaacaatggc tttgaaaaag ttgattatga aaattttgaa atcattagtg ttgcgatttt
     3481 aaaacacaat attttaaatt ttaactataa agaaaaaagt cgcgaagtca aaccttataa
     3541 gcttttaaac tatcaaggaa tttggtattt aatagctgat gaaaaggata aattaaagca
     3601 ttttactttt agcaaaatta aaaatatccg taaaaataat gaaatcttta cccctaaaga
     3661 agaattttta gaccaaattc taaatgataa aaatatttgg ctagatgata gcaaagaagc
     3721 tatcgtaaag cttgataaaa aggctaaaga gtattttttt tagaaaaaat attttaaaca
     3781 actttgaact catcgatgaa gatgagcaaa gctatactct aaaagtatat ttttcctatg
     3841 atgatgagct tctaaatgta gtaaaacaat ggatactcta tatgaagata gaaaaacctt
     3901 ttgaactgaa agaaaaacta gatagcattt taaaagacta cttggaaaac taatttctta
     3961 ataaattcaa atattttttg ctataatcac agttttattt taatgagagg agaaaatttt
     4021 ggcaaaagac gatgtgattg aaatcgatgg cacagtgctt gaagcattac ctaatgcaaa
     4081 ttttaaagtt gaacttgaca acaagcatgt gattttatgt catatagcag gaaaaatgcg
     4141 tatgcactat ataagaatca tgccagggga taaagttaaa gttgaactta caccttatag
     4201 ccttgataaa gggcgtatca cttttagata taaataatat aagttattta aaagctaatt
     4261 ttagataaaa ttagcgtttt tgcgacaaaa tgtatcgaac tatatgaaga ggtattttta
     4321 aaattcacca cttattttaa aaatagttgg ttattcataa aacctgatgc agtcgtaaat
     4381 gaagtggaat tcatttaagg agaactcatg aaagtgagac catcagttaa aaagatgtgc
     4441 gacaagtgca aagtagttcg ccgtaaaggc gtagttcgca ttatttgcga aaatccaaaa
     4501 cataaacaaa gacaaggata aacatggctc gtatcgcagg tgtggattta ccaaagaaaa
     4561 aaagaattga gtatggactt acctatattt atggtatagg actttttact tcaagaaaaa
     4621 tcttagataa aacaggcatt tcttatgata aaagagtgca tgaactaagt gaagatgaag
     4681 cagcagctat cagaaaagaa atccaagaaa actatatggt tgaaggggat ttaagaaaac
     4741 aagttgctat ggatataaaa gcacttatgg atttaggaag ctttagaggc ttaagacaca
     4801 gaaaaggctt accagttcgc ggacaaaaaa caaaaacaaa cgcaagaact agaaaaggta
     4861 agagaaaaac tgttggtgca aaatcataag gataaaagat ggcaaaaaga aaaatcgtaa
     4921 agaaaaaagt agttaaaaaa aatatagcaa aaggtattgt ttatatcagt gcaactttta
     4981 acaataccat ggtaactgtt acagatgaaa tgggaaatgc tatcgcttgg agcagtgcag
     5041 gcggtttagg atttaaaggt tctaaaaaat caactcctta tgcagcacaa caagcagtag
     5101 aagacgcttt aaataaagca aaagaacacg gaatcaaaga agtaggcatt aaagtacaag
     5161 gaccaggaag cggtagagaa actgctgtta aaagtgtagg tgctatggaa ggaatcaaag
     5221 taactttctt aaaagatatt actccattag ctcataatgg ttgcagaccg cctaagcgtc
     5281 gtcgtgtcta agatataaga aaaaattagg agaattaatt atggcaagat atagaggacc
     5341 agtagaaaaa ttagaaagac gctttggtgt tagcttagca ttaaaaggag aaagaagact
     5401 agccggaaaa agcgcattag ataaacgccc ttatgcacca ggacaacacg gagcaagaaa
     5461 aggtaaaatc agcgaatacg gactccaatt aagagaaaaa caaaaagcta aatttatgta
     5521 tggagtaagt gaaaaacaat tcagaagact ttttgcagaa gctgctagaa gagatggcaa
     5581 tacaggggtt ttacttatcc aacttttaga gcaaagactt gacaatgtag tttatagaat
     5641 gggctttgct acaactcgtc gttttgcaag acaacttgta actcatggac acattttagt
     5701 aaatggaaaa agagtagata tccctagctt tagagtagaa gcaggagcaa aaatcgaagt
     5761 aatagaaaaa agcaaaaata atcctcaaat cacaagggcg atcgagctta ctgctcaaac
     5821 aggtatcgtt gcttgggtag atgtggaaaa agataaaaga tttggaattt tcactagaaa
     5881 acctgaaaga gaagaagtta tcattccagt agaggaaaga ttcatcgttg agctttactc
     5941 taagtaatag gggctaaatc atgagaaaca ttacaacatc tgcttatacg ccgacagaat
     6001 tcactataga aaatattagt gatactgtgg ctaaaatcag tgcttggcct tttgagatcg
     6061 gctatggtat taccctagcc catcctttac gccgtttact ttatactagc actataggtt
     6121 atgctccaac cgctatccat atcgatggtg tagcgcatga atttgatagt atgcgtggta
     6181 tgcttgaaga tgtagcactt tttatcatca atcttaaaaa attacgattc aaacttaaaa
     6241 gcgattccaa caaagaaatc gttgagttta gtttcaaagg ccctaaagaa atttatggta
     6301 aagatctaaa caacgatcaa gttgaagtcg taaatacaga tgcatattta gcaacgatca
     6361 atgaagatgc tgaacttaaa tttactctta tcatagaaaa aggcattggt tatgtaccaa
     6421 gcgaagagat taaagagctt ttaaatgatc caaaattcat agctcttgat gcttttttca
     6481 ctcctgtaag agaggcgact tatgatattg agaaagtttt atttgaagac aatcctgact
     6541 atgaaaaagt agttttaaca gtaactactg atggacaaat cactccaaac gaagcttttc
     6601 aaaatgcttt agaagctatg tataagcaat tatcagtatt tgataagatt acaaatgtta
     6661 gaagcatcat aaaaagtcaa gctacaagca atgaattaga aaatactaaa ttattgcaaa
     6721 atattactga tctaaattta agtgcaagaa gttacaattg ccttgaaaaa gcaggaattg
     6781 tttatatcgg agagcttgct ttaatgagcg ttaatgaact tgctggactt aaaaatttag
     6841 gcaaaaaatc tttagatgaa attaaaagca ttatggaaag cataggcttc cctgtgggta
     6901 cttctaagct tagtgataat aaagatttgc ttaagaaaaa aatcgatgaa ttaaaagcac
     6961 aaaacgaagg ataaagaatg agacataaac acggatatag aaaacttggc agaacttcat
     7021 ctcatcgtgc tgccttgtta aaaaatttaa ctatagcttt agttaatagc ggtaaaatcg
     7081 aaacaactct accaaaagct aaagaattaa gaggctatgt agaaagattg attactagag
     7141 caagacttgg agattttaac gctcacagag cagtttttgc tgctttacaa gataaaaatg
     7201 ctacaaataa acttgttaca gaaatagctc caaatttcaa agaaagaaat ggtggctata
     7261 caagaattat caaaacaaga attcgccgtg gtgacgcagc tgaaatggct tttattgaat
     7321 ttgtagccta aaaattccag cttaagctgg aattttaaaa ttcatttttc ttatattttt
     7381 ctaatttact ccaacttttt ataaatctaa aaattcaaaa tcatctttta aatccaattc
     7441 taaaaataaa aattcttaaa tgattattta aaaaataatt tttagccaaa tttttaacta
     7501 cttatgctaa tataattttt tatttttata aatgcaagga tataaaatat gcaagaaaat
     7561 tctcgtttgc gtatagctat acaaaaatca ggcagactct ctaaagaatc cgtagaactt
     7621 ttaaacaaat gcggaattaa aatgcatata catgagcaaa gtctcatagc tttttcaacc
     7681 aacctaccta tagatatttt aagagttaga gatgatgaca tacctggtct tatctttgat
     7741 ggagtcgtag atcttggcat tataggcgaa aatgttttgg aagaaaatga actcgaaaga
     7801 aaaagcttag gcgaggaagc aaattacaag cttttaacaa agcttgattt tggttattgt
     7861 agactttcac ttgccttgcc tcaagagaaa aaatttgata atttgaaaga ttttgaaaat
     7921 ttaagaatcg ccacttctta tccacagctt ttaaaacgct ttatgaaaga aaacaacatt
     7981 cattataaaa attgtatgct tacaggttca gttgaagtag ctccaagagc aaatttagcc
     8041 gatgcgattt gtgatcttgt ttcaagcggt gcaacactac aagcaaacaa tcttaaagaa
     8101 gttaaagtta tttaccaatc tcgtgcttgt ttgatacaaa agcaaaatac tctaagcgat
     8161 gaaaaacaag ctttggttga taaaatcatg cttcgcgttg caggagtaat gcaagcaagg
     8221 gaaagcaaat acatcatgct tcatgctcca aaagaaaaac ttgataaaat ccaatcccta
     8281 cttccaggcg tagaaaagcc tactatcttg cctttagcac acgatgaaaa aaatgtagcc
     8341 ttgcatatgg taagtaaaga aaatcttttt tgggaaacta tggaggcctt aaaagaagaa
     8401 ggtgcgagtt cgattttggt tttacctatt gaaaaaatgt taaagtgagt aaaaaatgca
     8461 aataataaat tttaacgaat tagacgaaaa acaaaaacaa gaagtattaa aacgccctgc
     8521 aatagcagca aaagatgaaa tttcacagat agtgagctct atcatcaaag aagttagaga
     8581 aaaaggcgat gaagctttga tagaacaagc tttaaaattt gacaaagccc aaatttcaag
     8641 cattaaagta agtgaagaag agcttgaaaa cgcaagctta cgcttggata aagacttaaa
     8701 agaagcgatt ttaatcgctt atgaaaatat caaaaaattc cacgaagcac aaattccaaa
     8761 agaaatagcc attgaaacca ccaagggtgt aaaatgcgaa gttttaacac gccctattga
     8821 aaaagtagga ctttatatac cagggggttt ggcgccttta ttttcaacgg ttttaatgct
     8881 agcaattcct gcaaaaatag ctcaatgtga aaaaatcgtt ttggcaagcc ctgctaaaat
     8941 aaacgatgcc acactttttt gcgccaagct ttgcggagta gatgaaattt atcaaatggg
     9001 tggtgcagga gccatagcag cactagctta tggaaccaaa agcgttttaa aagtagataa
     9061 aatctttggg ccaggcaatg cctttgttac cgaagctaaa cgccaagtaa gtagtgatat
     9121 aaacggagct gctatagata tgcaagctgg acctagtgaa gttttagtca tagcagatga
     9181 gaaagcaaat gttaaatttg tagcaagcga cttgctttca caagctgaac acggcgcaga
     9241 ttctcaagtg attttagtat gcttaagcaa agaatttgca caaggtgcga gtgatgaagt
     9301 aagccgccaa cttgaaaatt taccaagaaa agaattagcg tctaaaagca ttgcaaattc
     9361 taaaatcatc attgcaaaaa acttagatga agctctttta atctcaaatc tttacgcacc
     9421 tgagcactta atcatacaaa cacaaaatcc tcgcgaactt ttagataaag tcaaacacgc
     9481 tggatctgta tttttaggtg agttaagtcc agaatccatg ggtgattacg caagcggaac
     9541 aaatcatgtc ttgccaactt atggacttac taaaacgcat tctagcttgg gtttagctga
     9601 ttttagtaaa agaatgagcg tacaagaact tagcaaagaa ggctttttaa atttaggaaa
     9661 aagtgttgaa attttagctg caaatgaaca tttagacgca cataaaaatg cagtaacttt
     9721 tcgcttagaa agtctaaaat gagtgaaaaa atccttttta tcgatagaga tggcaccatc
     9781 atagaagaac caaagagcga ttttcaaatc gatagccttg aaaaacttcg ttttgaaaaa
     9841 ggtgctatcc ctactctttt aaaacttaaa aattttggct ttaaatttgt gcttgtttct
     9901 aatcaagatg gccttggaac tcaaagcttt cctaaagaag attttgaaat agcacatcaa
     9961 aaaatgttgg atattttaca aagctgtggt atagaattta aagacatttt catttgtcca
    10021 cattttgaaa atgaaaattg cgagtgtaga aagccaaaaa ccgccctttt agatgagtat
    10081 atcaagcaca atctttacaa taaagaacaa agctttgtga tcggtgatcg agatactgat
    10141 atgatcctag cttcaaattt gggtgttcgt gggttaaaat acagcgagaa tttgacttgg
    10201 aaagagatag aagaagagat cttaaattcc tttcgcaccg caagcatttc gcgtatcact
    10261 aaagaaacca atatccatgt aaaagtatgt ttaaatggcg gaaagattgc tattaataca
    10321 ggagttcctt ttttcgatca tatgcttgag caaatcgcag tacatggggg cataggactt
    10381 gaaatttctt gcaagggcga tttagaaatt gatgagcatc atagcgttga agatgttgct
    10441 ttagctttag gaagtgccat aaaacaagct ttaggagata agataggcat cacaagatat
    10501 ggctttgtct tgcctatgga tgagtgtttg gcaagttgtg cgatcgattt ttgcaaccgt
    10561 ccgcatttgg tttataaagc caaatttaaa aaggaaaaat taggcgaatt aagtactgaa
    10621 atgatagaac acttttttta ctcgctaagc tactcaatgg gagtgagttt acacttaaag
    10681 gttaaaggta aaaacgatca tcacaaagcc gaagggcttt ttaaagcttt tgcaaaagcc
    10741 ttaaaaatgg ctgtaaaaat tgaaagtgaa aatttagcca gctctaaagg ggtaatatga
    10801 aactgatcat catcgataca gcatgtgcaa atttggcatc tttgaaattt tgtcttgata
    10861 gactaggctt taatgctaaa atcagtagag atttaaaaga tttagaaaat gcggataagc
    10921 tttttttacc aggagttgga acagcagcaa aagcaatgag caatttagaa agctttaatc
    10981 taacaaattt tatcaaaaat accaaaaaac ccttacttgg aatttgccta ggaatgcaaa
    11041 ttttagggga tttttcagaa gaactagatc aagaaactct aggcattata ccttttaaaa
    11101 ctcaaaaatt tgaacttcca aaagagtatt ctttaccgca catggggtgg aatgaagttg
    11161 caagctcaca cccacttttt aagggtttaa atggggctta tttttatttt gtacacagtt
    11221 atcatgtagc attaaatgac tataccatag ctacaagtga ttatggggta aaatttagcg
    11281 caagtttagc aaaagataat ttttatggcg tacaatttca ccctgaaaga agcggagaag
    11341 cgggggaaat tttaatatca aatttcatta aggatatagc atgataatcc ctgcacttga
    11401 tttgatcgat ggacaagtag tgcgccttgt taaaggtgat tatgaacaaa aaaaagtata
    11461 caaatacgat cctttagaaa aatttagaga atatgaaaac gcgggagcaa cttggcttca
    11521 tttagtggat ttaagcggag ctaaagatcc aaataaaaga caacttgctt taatagaaaa
    11581 attaacaaat gaagtcagtg ttaatttgca agtaggcggt ggaattcgca ccaaagaaga
    11641 gatacaagct ttgcttgatt gtggagtaaa gcgtgtagtg atcggctctt tggcaattac
    11701 aaatcctacg ctttgtgttg aaattttgca acattttgga agcgaagcta tcgttttagc
    11761 gcttgatacg attttaaaag aagattatat gatagctatt aacgcttggc aagatacgag
    11821 cgataaaaga cttttagagg ttttggaatt ttataatatc aaaggcctaa aacacatact
    11881 ttgcaccgat atttcaagag atggcaccat gcaaggaagc aatgctgaac tttacgcact
    11941 catccataaa aactttccta aaattcacac tcaagcaagt ggaggtgtag cgagtttaaa
    12001 agatcttaaa aaactaaagg gtatttgtag tggggttatc gtaggaaaag ctttattaga
    12061 tggagttttt agcgtagaag aagggataaa atgcttacaa aacgcataat tgcatgttta
    12121 gatgtaaaag atggtagagt agtaaaagga acacagttta aaaatcataa agatatggga
    12181 gatatcgtag agcttgcaaa gcgttattct caaagtggga tcgatgagct tgtgttttat
    12241 gatattgctg caagtgctag aaaagaacgc atttcaagag aatgggtaag cgaagtggct
    12301 aaaaatatca atatcccttt ttgtgtagca ggcggcatta aaagtgaaga agatgcagcc
    12361 gaactcttag ctaatggagc ggataaaatt tctatcaact cccctgcttt aaacgatcca
    12421 aatcttatca ctcgtttggc caaaagtttt ggggtacaat gtgttgtagt gggcattgat
    12481 agctttaaag atgaaaatgg aaatttaaag gttttcaaat acacaggtga tgaaaacacg
    12541 agtaaacata gcgggaaaaa tacgatcgag tggattaagg aagtacagga tttgggcgct
    12601 ggagagatag tgctaaatat gatgaatcaa gatggtgtta aaaatggata tgatttagaa
    12661 caattaagcc ttgtaaaaaa agaatgcaaa gtacctttga tcgcaagcgg tggagctggt
    12721 aagatggaac actttttaga agcctttgaa ataggagtgg atggggcttt agcagcttct
    12781 gtttttcatc aacaaatcat tgatattaaa gaattaaaaa actacttaaa aacccgaggt
    12841 gtaagtataa ggatataaaa atgcaaaatt tccaaaattt aaatgaaaaa atcaattggc
    12901 aaaaagtaaa tgggcttatc cctgtcataa tacaagatgc aaaaagctgt gaagttttaa
    12961 tgctaggttt tatggatgaa aaagctttag aaaaaagctt agaaagtaaa aaagtcgtat
    13021 ttttttcgcg tactaaaaat cgcctttgga tgaagggtga agaaagtgga aattttttaa
    13081 atatcgttga tttaagcctt gattgtgata atgatacact tttgattttg gttgatccta
    13141 taggagctac ttgccatata ggtaatatct cttgctttga aaatgtatca aaaaatgcag
    13201 attttgtctt tttagcaaga ttagaaaaac ttataaattc acgtaaaaat gcggatgaaa
    13261 acacttccta tactgcaaag ctttttaaaa aaggaacaaa acgcatcgca caaaaagtcg
    13321 gcgaagaagg tgtggaaact gccttagcag cgactgttaa agataaagat gagcttattt
    13381 gcgaggcggc tgatttgatg tatcatttaa gtgttttact cgcagatgca aatttaagtt
    13441 tttcagatgt catcgctaag cttaaagaaa gacataaaga ataaattgaa aaatatcatt
    13501 ttaggctttt tgatcttttt tatctaccct gcattaatga tgtttttcat cttaatgcat
    13561 agaaaatata tatctgaagt gccaatgtta ggttttcata caaacatgga aatttttaaa
    13621 cgagcaggta tttattattt ttatctttta gtaattcata tccctttatt tttagtgtgg
    13681 aaaaaagtta tttcaaggat agaaagttta gattttataa atacttttta ttttgggatt
    13741 gcttttagcc tttgtgtgtt tttcttgctt accttgcctt tagatgggca tttagcttta
    13801 gtgcctttgc tatgcgtgtt gtttagtttt gtctttgttt ttaaatttat ttatttttgt
    13861 tttaagaaaa tttcttattt tacttggaaa aaacttattt ttataataac tacattacta
    13921 ggtatttgtg caggtttagc ttatatcttt ttttgccttt attatcaact ttgtattttt
    13981 gacaattacg attttttagg taaattttat aatatccctt cttataaaag gcctttgaat
    14041 tttatatttt aatgaaaaat atggacaaaa aagcctaaaa ttaggctttt gtcgataatc
    14101 tagggtaaat taatgcaaag cttcgttaag cttgatcgct tttttattta aacttactat
    14161 catcgctccg ctgatagaat cttgacggaa atgaagccca tttaagcctt taagctcgat
    14221 gcccttataa atctctttgc taaaatcaaa ataaggatta agtttagcaa gctcctcacg
    14281 atctttaagt aaaattttcg ttccttcaag cactgcaatt cccgcatcta cgatacaatt
    14341 atcacccaaa ggaattcctg ttactgaatt tgctcctaaa agacaagctt tacctacact
    14401 tatagcattt ccacttgttc cgcttaaaac acctaaaata gaagcaccac cgcccacatc
    14461 agagccttca cctacgatag cacttgaact tatacgccct tcaaccatac aagcccctgt
    14521 tgttcctgcg ttaaaattca catagcttgc acctggcatg attgtagtac ctgcagccaa
    14581 agatgcaccc attcttactt tagagctttc tagaattctt gtattatctt caggaatgat
    14641 atgtgctaaa aatcttggga atttatctac aaaatcaatt tttggatatt gattgctcat
    14701 ttttaaacgc atttcatttt ctcttaaata ctcaagctcg ataggcttat catcactcca
    14761 agctacattg cttaaaagtc caaaagctcc atttaaattt aaacttctta aaggaacttt
    14821 tttagtagaa agcaaataaa gtttcaaata aacactttcc acactcaaag gctctttatc
    14881 ttcaaaaaga catacaaaag caaattcgtc atctttaaat ttatctttga taatctttaa
    14941 aatatcgata tttttatgtc cctcttcttc taaaaaaggt ttaaagcaag caagcgcata
    15001 atcgatatcc tcaagcttaa gaatttgtac aaattcgctt gcttcaaaat caatctcaac
    15061 acccctttgc ataaaagctt caagcataat cgccgcagaa ccaaaatttt gctcataatt
    15121 taccaaagca aaactggctt gtaaaatttt atttttatta agctgaccac gatcaagtct
    15181 tgctatacca aaagctttag gttttctata tccatttttt tgttcaattt gtttgattaa
    15241 aagtaaaaaa tcttctttag tattaataat cattttttct ccttcaaaat tttaatgcga
    15301 acaagcactt tttccattca tcacaggttg gattgcagaa ttatccgcac cgccttcatt
    15361 attgattttt tctacaaatt gccaaatttt ttcagctgcc attaaataac gctttgcact
    15421 tacactttca ggatgataaa aactcacagg ttttccttca tctccaccct ctcttactat
    15481 catctctata ggaatttgtg ctaaaacttc actcttataa gcttttgcca tatcttcagc
    15541 tgttccttta ccaaaaatat catactcttt gccattatca ggacataaaa agccactcat
    15601 attttctatc acgccagcga ttggaatgtg aagtttgtta aacatatcta aagctctttt
    15661 gctatcatct aaagaaacgg tttgtggggt acttacacaa acacccgcag taattggaat
    15721 gctttgtgct gaagtaattt gcgcatctcc tgttcctgga ggcatatcta aaaacaatac
    15781 atcaagttca ggccaaatca catctgcaag taattgctcg atagctttca tgatcatagc
    15841 tccacgccac ataagccctt gaccctcttc gattaaaacc cccatactca tcatataaac
    15901 accatgactt aaaatcggct ttaatctttg tcctactact tcaggttgag ttttagtttc
    15961 acctaacatc cttgggatat ttggcccata aatatctgca tctaaaatcc ctactctttt
    16021 tcccatttta gccatagaaa tagctaaatt tacagtggtt gtagacttac ctactccgcc
    16081 ctttccgctt gaaaccatga tgaaattttt tacttgaggt gcgatatttt taccacttct
    16141 tgaattgctt ttttcttcag gaatttttgg agtaatgata tgaatttgta aattctttaa
    16201 atttaaagaa gctaaagcct catcaatatt tttgcgtaat tcttcgctta cttgcggatt
    16261 tgatgaaaca atttcaagct caacgataac attctcattt tcggttttta tatcttttac
    16321 aaaattaaaa ctcactatat ccttatcaaa acctggatat tttacacttt ttaatttctc
    16381 taaaatttgc tctttcatct cttttcctta atttttaaaa aatcaatttt actaataaaa
    16441 tgataaaatt tagcttttta taagtgtata atatggtaac attatatata aaattaatat
    16501 tatagcaaag ggaaaaaatg gctaatctta gcttgattat gctagcagct ggaaattcta
    16561 ctcgctttga tatgggagta aaaaaacaat ttttacgcct tggcgacgat cctttatggc
    16621 tttatgctac gcgaaattta agcacttttt atccttttaa aaaaatagtt gttacttcta
    16681 gtaatacttc ttatatgaaa aaatttgcta gaaattatga atttgttgaa ggtggtgcca
    16741 ctagggcaga atccttaaaa aaagccctag aaatcataga cagtgaattt gtaatggtaa
    16801 gtgatgtagc aagagtttta gtaagtaaaa gcttgtttga tcgtttgatt gaaaatttag
    16861 ataaagctga ttgtatcact ccggctttaa aagtcgcaga taccacgctt tttgaaaatg
    16921 aagccttgca aagagaaaaa atcaaactca ttcaaactcc tcaaatttca cgcactcgct
    16981 tactcaaaca agccttaaat caaaatttag atttcacaga tgatagcaca gctatatctg
    17041 cagtgggtgg aaaaatttgg tttgttgagg gtgaggaaaa tactagaaaa ataaccttta
    17101 aagaagatct taaaaagctt gatttacctc gaccaagtaa tgaaatcttt tgcggaaatg
    17161 gttttgatgt tcatgaattt ggagaagaac gccccttgct tttaggtgga gttgaaattc
    17221 atcctactat gggcttaaaa gcacacagtg atggagatgt tttagctcac tctttaaccg
    17281 atgcgatttt gggtgctgcc tgtctaggag atataggcga actttttcct gatacggatg
    17341 aaaaatttaa aaatgcaaat tctatgaatc ttttaaaaga agcatataaa agagttaagg
    17401 agcttggctt tgaacttgtc aatatagata tttgcgtgat ggcacaaact ccaaaactta
    17461 aagattttaa agaagccata gctcaaaata tagcaaatac tcttaatgtc gatgaattta
    17521 gagtaaatat caaagctacc actactgaaa agctaggttt tatagggcgt aaagaaggta
    17581 tggctgtttt agcaagcgca aatttaaaat attttgattg gacgaaaata tgaaagtttt
    17641 aattatagaa aatgaaattt atctagctca aagcataagt attaagctta gtgatgtggg
    17701 ttatagttgc gaaattatca attcttttga tgagcgtaat cctgaaaaat attatgatat
    17761 tgttttactt tctactaata ctagtaattt tttaaaagcg gttacggaat ttaaacatag
    17821 cattattatt ttgcttattt cttatatcag cacagacaca gtttcaaatc ctttaaaact
    17881 tggtgcgtgc gattatatac aaaaaccttt tatgatagaa gaattgatac gaaaaatcaa
    17941 acattatcaa gattttaaaa agctctccat tcttaataaa gcttataaaa gctatattaa
    18001 atcaagactt caaacagtta aaattccaga atacaactat aaaaaactaa aacttcctgt
    18061 tgttttaaaa tccaacaaac aaagctcagc tgatgccttt gtatttaatt atatcaacga
    18121 atacgatatc accctttctt atgttgatct atctgtgagt aattcagtag aaaaagcgat
    18181 gaaacttcca acggaaaaca atcttttatt cttgagtaat tttcaagttt taaaaccgct
    18241 agagcgtgaa aaattgcttg aatttatcaa aaacaaatca gttattttac atactaattc
    18301 aaatatagaa gatttagagc ttccgtgcat caatcttagt gataatgaaa aaaatatcga
    18361 tagtaatcaa attttaacca tagatgaata tgttaaatat attattttaa attatcaaaa
    18421 tgtctttcct gatacagatc tttcaaagaa attaggaatt tctcgtaagt ctttatggga
    18481 gaaaaggaaa aaatatgaaa tcagcaaaaa aaaataaaag cattatcata gacaaaaacg
    18541 aactaggcat tctttctctt atcaaagagg gtttgcttgg cagttgtact catttaatgg
    18601 atgaacatga gacaaaacaa atttttaaaa cgggcaaatc caacaacgaa agctttcctt
    18661 atcctctatc ctttgctcca aaagtttcag aagaatttat taaagatatt cgcataggaa
    18721 gtaaaatcga cctcattctt gatgatgaaa tagtaggaaa tatcacgctt aaaagtaaat
    18781 ttaaaaatga taaaaatttt tccaatatct ttagcccaca cacctgctct ttagatgata
    18841 tgggtgaaat ttgtatcggt ggagagatag aaatttataa ttccacaatc caaaaaatca
    18901 aagaagaatt tcataaaacc aaagaaaatc ttaatgctca taaaattacc gctatagttt
    18961 caagctttga tcctttgcat agagcgcatg aaagaatgtt tcgctggact atagataagg
    19021 cggatttggt tgttgttttt cttgtagaat cttttgatgc caatggcttt gattttgatt
    19081 tgaagcaaaa ttatttgaaa aaatttattc aaaattattt gccaccggat agaattttta
    19141 tcttcccact taaagatatc aatcttttcc atgctcattt aaatcctagc ttagaaagca
    19201 ttttggctaa gagtcttgga tgtaccaaac ttgtcgtagg gcaaaatcac acaggacttg
    19261 gaatgtttta tgatgataat cagcctaaaa ccatactgga tgatttttct aaagattatg
    19321 atatagaagt gattgttttg cctgaatttg tattttgcga tgcatgtcgt atgatagtaa
    19381 gtactcgatc ttgccctcat ggatgccatc atcatttaca ttataattct caatccttaa
    19441 aagaattgtt aagagcaggt attgtgcctc ctgctgtttt tatgcgaaaa gaagtttcaa
    19501 gtattatctt atcttctatt tttcctaatc gatttaagaa tttgcaaaaa atctataatg
    19561 atctttttgc aacagatgga attttagaat acaaaagcga tgaagaattt tatcaaaagc
    19621 ttttagaaac tcatcaaatg tcttatatgg tttgaaagga aacaatgcaa aaactttttt
    19681 taactttttt ttattcaggg tgtgcaaaaa aagcaccggg gacttttgga actttagcag
    19741 ctttaattcc tgcttttttt atattaaaat atctaggaat cactacctta tttttactca
    19801 gcattttaat ttttattgct agtataagag tgattgatga ttatgaaaga aaaacaggga
    19861 ttcacgatga taaacatata gtaattgatg aagttgcagg agtttttcta gcgtgtgcca
    19921 tcgctgcaag cggcgctaat tctttactga atttttttat ggccttcgtg ttttttcgca
    19981 tctttgatat cacaaagcct tctatcatag gaaaaatcga taaaaaaacc aaaggtggat
    20041 tgggtgttat gctagatgat atgctagcag gattgtttgc agggctttta agtgcagtga
    20101 tttatggttt tttgcttaaa tttgatttag tcttttggga taaagacttg ataaatttat
    20161 tttg
//
LOCUS       DBBXOW010000028        19933 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.029, whole genome shotgun sequence.
ACCESSION   DBBXOW010000028 DBBXOW010000000
VERSION     DBBXOW010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19933
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.029"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            56..1147
                     /gene="lpxB"
                     /locus_tag="ACJE1S_000962"
     CDS             56..1147
                     /gene="lpxB"
                     /locus_tag="ACJE1S_000962"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HGG0806523.1"
                     /translation="MKNLLVCALEPSANLHLKEVLKAYKEEFGEFKLDGIYDENLCKE
                     FALNSTPLYSSHEFSAMGFVEILPLIFKAKKAIKELVNLTLNQTIDAVLCIDSPAFNI
                     PFAKALKKANSKTKRIYYILPQVWAWKKGRIPIIESHFDVLASILPFDEQFFSKSIYV
                     GHPLLDEIKDFKNENDIKILLSKNESEKTIAFLPGSRRSEIKRLMPVFRELSRKFEGE
                     KILCVPPFNLERLEIYGDVKDFKIQSNTPQVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKTIDIFIARLFVKLKHIGLANIFCDFAGKEALNPEFLQDEVNVLNLYEAYNKYD
                     YKAFFDKVHFLKEYLKFGSAKNLAKILNQ"
     gene            1165..1650
                     /gene="greA"
                     /locus_tag="ACJE1S_000963"
     CDS             1165..1650
                     /gene="greA"
                     /locus_tag="ACJE1S_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HGG0806524.1"
                     /translation="MQKEPMSQFGYDKLSAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLIARAQIIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDEFKVRLPKGESEFEIISINYEPLK
                     F"
     gene            1660..2418
                     /locus_tag="ACJE1S_000964"
     CDS             1660..2418
                     /locus_tag="ACJE1S_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HGG0806525.1"
                     /translation="MLLQNGAILIADAHENDKRRGFWEFLQALKRSEITTPQLILMGD
                     IFDLLIGEISATHEFAKPYIKLLEELALKMEIIYLEGNHDFNLARFFQRVKIFNLQEQ
                     PLKLNLHTSKGKNTDFKNSFITLAHGDIFLSPPLQFALKSLRNHYLLVFLNFLNQISF
                     NSISNKILKNQNKKNLFYKIENFKNLAKERYKKYENLGFWVCEGHYHQNLILDEKDVK
                     YFNLASFAYERSFFVVECCQEIKFREQKLRGQNV"
     gene            2411..3367
                     /locus_tag="ACJE1S_000965"
     CDS             2411..3367
                     /locus_tag="ACJE1S_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HGG0806526.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYSPKTDIDFSKIEKFSGSALILDDSMTARKRVKEMMQQMGFQVIEAKDGVEGL
                     NKLEELSQVYGENLSSVLKIIVSDVEMPQMDGFHFAARIKEDARFKDIPIVFNSSLSN
                     EFMNEKGVHEAGGESYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            3371..5665
                     /locus_tag="ACJE1S_000966"
     CDS             3371..5665
                     /locus_tag="ACJE1S_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HGG0806527.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELETNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPNGVENETPVEAPQKEEPAPTPEPEVDV
                     NQLSDSEVEAEIERLLKARKAEDQARRAQKKQNTAASTTSKPAASTPKAENMEKKVPA
                     SGGGGGGMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFLEELNQ
                     VVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGEETELD
                     KSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVVEITDD
                     GKGLDANSLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGRGVGMD
                     VVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLASVLET
                     VRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVAESKLG
                     IIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKEIKVDI
                     KAQIESSAKKPKEKPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEALNIIK
                     SGDHDIDAILIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGM
                     TEYITKPYSPEYLENVVRKNLKLG"
     gene            5670..6191
                     /locus_tag="ACJE1S_000967"
     CDS             5670..6191
                     /locus_tag="ACJE1S_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HGG0806528.1"
                     /translation="MSNEKLEQILQKQQTQIAGPVGDQKEDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFNLGSSKMTPQTRYI
                     VLRGESNGSGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            6191..6814
                     /gene="serB"
                     /locus_tag="ACJE1S_000968"
     CDS             6191..6814
                     /gene="serB"
                     /locus_tag="ACJE1S_000968"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HGG0806529.1"
                     /translation="MIKLCVFDFDSTLMDGETIDILAKAYDKEKEVVDITHRAMAGEL
                     DFFESLQERVSFLKGMPYDLVLKIGQDLPLMNGAYELIEFLNSKNIFVVIFSGGFHEG
                     IDPAMKKLKVNLGFANYLHHKNNTLSGLVGGEMMFSNSKGLMLQRLKNFLNLQTHEVM
                     CVGDGANDIAMFNESGLKVAFCAKEILRSKADICVDNKDLKEIIKVI"
     gene            6816..7802
                     /locus_tag="ACJE1S_000969"
     CDS             6816..7802
                     /locus_tag="ACJE1S_000969"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HGG0806530.1"
                     /translation="MKKFSLWCDFIENSFLDDDFLNLLSRGVNGATSNPAIFKNAILN
                     SPIYKEKIAKLKGKKAKEIYEELAIADIQKAADKLAPLYHTGNDGFISLEIDPRFYDN
                     TSLSLGEAKKLYSAIGKDNVMIKVPATNASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLIEFRKNNIALQGKNTHLRTPQAVISIFVSRFDRLLNSKAKEQNRIGILNA
                     NLAYNNIISKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSINTAPLDAINAFKTE
                     IEFKKPLMNFEIYTQLNAIISQNEREKACDELLKDGLEQFCIAFEEILQALN"
     gene            complement(7799..8221)
                     /locus_tag="ACJE1S_000970"
     CDS             complement(7799..8221)
                     /locus_tag="ACJE1S_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HGG0806531.1"
                     /translation="MIYLAQTDTTAGFLSKNLEEINALKGRAKDQPCLITSAKFDELK
                     KIVRVPNQFKNWVRRAKKTTFIYPNNQAVRIVKDCKHAQFLEKMGCFYSSSANKHGQK
                     FDELWARSVADVVVDEIFVENTPSKIIKLHRKKLKKIR"
     gene            complement(8218..11487)
                     /gene="carB"
                     /locus_tag="ACJE1S_000971"
     CDS             complement(8218..11487)
                     /gene="carB"
                     /locus_tag="ACJE1S_000971"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HGG0806532.1"
                     /translation="MPKRTDIKNILLIGSGPIVIGQACEFDYSGTQAAKTLKEQGYRV
                     VLINSNPATIMTDPEFADATYIEPVTKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLSKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGTGSGVVYNMDEFKELANAALALSPIHEILIEESLLGWKEYEMEV
                     IRDKNDNCIIVCSIENLDPMGVHTGDSITVAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAVNPTNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAIGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERNLSGFDRVKFEDKNDLIFKIRNANEKRLLYVAQAFREGFDVKELYELCKI
                     DPWFLSQIKEIVDFEEQIDMDILHNKTLLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNEARDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDLGVKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRGVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASEIGYPVLVRPSYVLGGRAMRVVTDESELRLYMQ
                     EAVDVSDKSPVLIDQYLDNATEIDVDAISDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEQIVQKTADIALNLGVVGLLNIQFAIYNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDAFGVVNFDNAILRPKPSKYISVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQISSFNHLPESGVVFISLKEKDKKYA
                     KKLASEYSKLGFKLMATSGTCKEIVETGFECELVHKISEGRPNVEDKLKNGEIQLVIN
                     TSDSHTFAGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQNQSYLEVKSLQEYLK
                     A"
     gene            11594..11848
                     /locus_tag="ACJE1S_000972"
     CDS             11594..11848
                     /locus_tag="ACJE1S_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002833078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HGG0806533.1"
                     /translation="MKKIKILVFLIFFCQFSVLANNLPQNIKENLGINQFLDESLKEI
                     LNQPLKEQFALTPKGEYFFEGNLSLFQKQCLENNATAYAY"
     gene            11836..12182
                     /locus_tag="ACJE1S_000973"
                     /pseudo
     CDS             11836..12182
                     /locus_tag="ACJE1S_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778059.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12158..12343
                     /locus_tag="ACJE1S_000974"
     CDS             12158..12343
                     /locus_tag="ACJE1S_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG0806534.1"
                     /translation="MYACGQGVEKDLIKAKELSSKACEKDTKLCFAQGWVELFNQNDI
                     LAQKLFYKSCQAGYYTD"
     gene            complement(12534..13427)
                     /locus_tag="ACJE1S_000975"
     CDS             complement(12534..13427)
                     /locus_tag="ACJE1S_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG0806535.1"
                     /translation="MLKNPKFQAFFFAFLAAIFNAFVGIFSVFLFKKGFMSSEVAFYK
                     CFVASVILFAILIYMRKLGALLVFIKQKIFTLLLLAFFGFFMLYHFESAAYTSMGVAN
                     VVFVLFGVGMIITFICEALDAKRFFHLNELLAMVFALLGLWMIFLAEGGTLENFTHLK
                     GLVNAILAGIGYALFLFFTRKLKLGFGLIPLCALLFIGSLYLSIPLFGANLNLNFSLE
                     SLILILALAFLPTIGGFYCTTRALSLAKSNSVQLIELSEPLFAMLFGFLFLAQSVSFL
                     QILGGVFILFAIFVHEFKLKL"
     gene            complement(13421..14362)
                     /locus_tag="ACJE1S_000976"
     CDS             complement(13421..14362)
                     /locus_tag="ACJE1S_000976"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HGG0806536.1"
                     /translation="MLFEKTILKELKVLYKLDNYHGIFAVLWDYLQIILTIAISCFMH
                     NIFMYLFAVLFIGTRQRALATILHESAHRILAKNRKLNDFLGKYPSGYLIFQTFEKYR
                     QSHVIKHHGFLGIENKDPDYDFYIQSKLFASRSLKEFIFRHLILPLFLGKTFDFISYL
                     IRNRLGDFKDKEIKYLILFWIAIFGICFYVNVLDILLMYWFVPLLTSFPMVGHFIEMA
                     EHFPIIKNKREIEKSWNRFGNKIELFFTGLHKENYHLIHHLFANIPFWNLDKAHNILC
                     KNEEYRLLNSNMGGIFSSSNKASSLWKKIIKKELKIC"
     gene            complement(14427..15881)
                     /gene="prpD"
                     /locus_tag="ACJE1S_000977"
     CDS             complement(14427..15881)
                     /gene="prpD"
                     /locus_tag="ACJE1S_000977"
                     /EC_number="4.2.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047547 - 2-methylcitrate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate dehydratase"
                     /protein_id="HGG0806537.1"
                     /translation="MSDMGILEAKRPEFDELLTKIAKYADEFEITSDLALETARYCLM
                     DTIGCGLLALKYPACTKLLGPSVEGAEFRPLGAKVFGTSYQLEPIRGAFNVGAMVRWL
                     DFNDTWLAAEWGHPSDNLGAIWAVADYVSRKNISEGKEPLKVKCVLKAMIKAHEIQGV
                     LALENCFNKVGMDHVLLVRIASTAVAAKLLGCDFEEIRNAISHAFIDGGALRTYRHAP
                     NTGSRKSWAAGDASSRGVDLALKAKTGEMGYPSALSAKFWGYEDVKMKGQKLTIPQEF
                     GSYVMENVLFKISFPAEFHAQTAVEAALALHDEVKDRLEQIEKIIITTQESGHRIINK
                     VGELANPADRDHCIQYMVAVPLIFGRLNADDYEDSVASDERIDALRAKMQVEVDDRYT
                     KEYLESDKRSIANAVQVFFKDGTSTKKVEVEYPIGHKRRRSEGIPLLIAKFKANLAAR
                     LSPKQCEKIMQICEDQKSLEQMNFNEFSDLFWLG"
     gene            complement(15891..17018)
                     /locus_tag="ACJE1S_000978"
     CDS             complement(15891..17018)
                     /locus_tag="ACJE1S_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase/methylcitrate synthase"
                     /protein_id="HGG0806538.1"
                     /translation="MSISEATKKTGGLAGVIAGQSAICTCGLGNGLNYYGYSIEELAQ
                     NAEFEEIAYLLQFGELPNAKELENYKEKIIAQRALSENLKNVLKAIPKEVHPMNLMQT
                     AVAALGALEGENEDFSDQDEKIIRLLGILPSMLCYWHHYVNFGKEIDFDSNQTSIAGY
                     FLEKLKLEAPKEDFIKAMQCSLILYAEHEFNASTFTARICASTKSDIFSAVAAAIGAL
                     RGPLHGGANEAAMHLIESFKSVEDAIEGVNKKLENKELLMGFGHRVYGLGGDPRNALI
                     KVWSKHLGGDDLLFKISEVIEALMKEKRPSLPPNADFYSASAYHFMGIPTEYFTPIFI
                     MSRVSGWCAHIKEQRANNKLIRPSSEYIGVEPRKFVKIQDR"
     gene            complement(17015..17890)
                     /gene="prpB"
                     /locus_tag="ACJE1S_000979"
     CDS             complement(17015..17890)
                     /gene="prpB"
                     /locus_tag="ACJE1S_000979"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HGG0806539.1"
                     /translation="MSAGKKFKELVKTSKPLTIVGAVNAYSALQATKIGHKALYLSGS
                     GVASASYGLPDLGIIALEEVCIDVRRICSRVDTPLLVDADTGFGGAFNIARTIKELIR
                     AGAAATHIEDQVAQKRCGHRPNKELVSTEEMCDRIKAAVDAKIDPDFVIMARTDAHAI
                     EGQQKAIERALAYVEAGAEMVFAEAITSLEEYEEFVKNVKVPILANITEFGKTPYFTK
                     EELNRAGVSMVLYPLSANRAMNKAAVQVYESILKNGHQKDVLEIMQTREELYEMLDYY
                     SYEQKLDELFKRGAK"
     gene            complement(17890..19797)
                     /locus_tag="ACJE1S_000980"
     CDS             complement(17890..19797)
                     /locus_tag="ACJE1S_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA synthetase"
                     /protein_id="HGG0806540.1"
                     /translation="MGIVYEQTYRESLQNPEAFWAEAAKKVHWYNEWDRVLDDSDGHY
                     RWFVGGCMNTCYNALDLHVHNGRGDQLALIYDSPVTDTKKKYTYKQLRDRVAKVAGIL
                     ANKGVVKGDRVVIYMPMIPEALIAMLACARLGAIHSVVFGGFAAHELATRIEDAKPRM
                     IISASCGIEVSSIIEYKPILDEAIKKCTHKPTTCLIWQRPQYRANMLPWRDIDWELEE
                     EKTRGVDPVPVLATDPLYILYTSGTTGSPKGVIRSNGGHSVAMKWSMDNIYNAKAGDV
                     FFTASDVGWVVGHSYIVYAPLMNGCTTIVYEGKPVRTPNPSAFWRIIEEYKVNVLFSA
                     PTAFRAIKKEDPKGEWIKKFNLDSLRSIFVAGERCDSDTLKWIEKLTKKPVIDNWWQT
                     ETGWAIAANPLGLEAQVVKAGSPTKPMPGFNLKVLDEKGQELGAGKKGILCLKLPLPP
                     ACLMGIWENDERYRRGYLDQFPGYYLTGDTGYIDKDGYVYVLGRMDGIINVAGHRLST
                     GEMEEIIAKHPDVAECAVIGVNDELKGEIPMGFIVLKEGIERDHRGIVEGVVALVRQE
                     IGAVASFKIATVVSALPKTRSGKILRKNLREIADGSTLNVPATIEDSNVLKACEKAIN
                     ALGYPKNKGEK"
BASE COUNT         6822 a         3594 c         3112 g         6405 t
ORIGIN      
        1 atgctaagaa aaatttagat attattttac tttaaaaatt gtatagagag tgaaaatgaa
       61 aaatctttta gtatgcgcct tagaaccttc ggcaaaccta catttaaaag aagttttaaa
      121 agcttataaa gaagaatttg gcgaatttaa acttgatgga atttatgatg aaaatttatg
      181 caaagaattt gccctaaatt ctacgccact ttatagctcg catgaattta gtgccatggg
      241 ttttgtagaa attttacctt tgatttttaa agcaaaaaaa gcaattaaag aattggtaaa
      301 tttgacttta aatcaaacaa tagacgcggt tttatgtatt gactctcccg cttttaatat
      361 cccttttgct aaagctttaa aaaaagcaaa ttcaaaaaca aaaagaattt attatatctt
      421 gcctcaagtt tgggcttgga aaaaagggcg cattcctatt atagaaagcc attttgatgt
      481 tttagcctct atcttgcctt ttgatgagca attttttagt aaaagcatat atgtaggaca
      541 tcctcttttg gatgaaatta aagattttaa aaatgaaaac gatattaaaa ttttacttag
      601 caaaaacgaa agtgaaaaga ctatagcgtt tttaccaggc tcaagacgca gtgaaatcaa
      661 gcgtttaatg cctgttttta gagaattatc acgcaaattt gaaggagaaa aaatcctttg
      721 tgtgccacct tttaatctcg aaagattaga aatttatggc gatgtaaagg attttaaaat
      781 acaaagcaat acaccccaag tgcttaaaaa agctgatttt gcttttattt gtagtggaac
      841 tgctacccta gaagcagctt tggtaggaac tccttttgtg cttgcttata aagcaaagac
      901 tattgatata tttatcgcaa gactttttgt aaaattaaaa cacattgggc ttgcaaatat
      961 tttttgtgat tttgctggaa aagaagcttt aaatcctgaa tttttacaag atgaagtcaa
     1021 tgttttaaac ctttatgaag cttataataa atatgattat aaggcatttt ttgataaagt
     1081 acattttcta aaagaatatt taaaatttgg aagtgcgaaa aatctcgcta aaatattaaa
     1141 tcaataataa ttaaggatat ataaatgcaa aaagaaccga tgagccaatt tggctatgat
     1201 aaattaagcg ctgaattaaa agatttaaaa gataaccaac gccctgctgt tgtgatagaa
     1261 atcgacaccg caagaagtca tggggattta aaagaaaatg cagaatacca tgccgcaaga
     1321 gaaaaacaag ccttgataga aagtcgtatc gcagaactta gcgatttaat cgcaagagca
     1381 cagatcatcg atccttcaag ctatgaacat gatagcgtta aatttggatc ttctgtggtg
     1441 attatggatt tagatactga aaaagaaagc aaatataccc tagtaggtat ttgtgaggga
     1501 aatttggata agggttatat ttctattgct tcacctattg caaaggctat gcttggtaaa
     1561 aaagagggag atgaatttaa agtgcgttta ccaaaaggag aaagcgaatt tgaaattatc
     1621 tctatcaact atgaaccttt aaaattttaa ggatagaaaa ttttactaca aaatggagcg
     1681 attttaatcg cagatgctca tgaaaatgat aaaagaagag gcttttggga atttttacaa
     1741 gctttaaaaa ggagtgaaat taccacacct caactcattt taatgggaga tatttttgac
     1801 ttacttatag gtgaaatctc tgctacgcat gaatttgcga aaccctatat taaacttctt
     1861 gaagaactcg ctttaaaaat ggaaattatt tatcttgaag gaaatcatga ttttaatctc
     1921 gctcgttttt ttcaaagggt taaaattttt aatctacaag aacaaccctt aaaacttaat
     1981 ttacatacaa gtaaaggtaa aaataccgat tttaaaaatt cttttatcac tctagctcat
     2041 ggggatattt ttttatctcc acctttacaa tttgctctta aaagcttgag aaatcattac
     2101 ttgctagtat ttttaaattt tttaaatcaa ataagtttca attctatctc aaataaaatt
     2161 cttaaaaatc aaaataaaaa aaatcttttt tataaaattg aaaattttaa aaatttagcc
     2221 aaagaaagat ataaaaaata tgaaaattta ggcttttggg tatgtgaagg gcattatcat
     2281 caaaatttaa tattagatga aaaagatgtt aaatatttca acttagctag ttttgcatat
     2341 gagagaagtt tttttgtagt agaatgctgt caagaaatca aatttcgaga acagaaattg
     2401 aggggtcaaa atgtttgatg aaaatatcgt gaaaacgggt tcaaatgaaa tggagcttgt
     2461 cgatttccgt atctttaagc aaggacacga taaagtctat gagggaattt atggggtaaa
     2521 tgtctctaag gttagagaaa ttatcaaaat tccaagcctc acagaacttc ctggtgtgcc
     2581 tgattatatc gaaggaattt tcgatcttcg aggcgtagtt ataccggtag taaatcttgc
     2641 taaatggatg caaatcacag agccagaaag cactatgcta aaacctagag ttattatcac
     2701 tgaatttagt aatattctta taggctttat agtacatgaa gctaaaagaa ttcgccgtat
     2761 caattggaaa gatatagaac cagctacttt ctctacaggt tcaggtgcct tagataaagg
     2821 aaaaattaca ggtgtcactc gtatagaaaa tgatgaagtt cttttgatac ttgatttgga
     2881 aagtgttgtt gaagatttag gaatttactc tcctaaaacc gatatagatt ttagtaaaat
     2941 tgaaaaattc agcggatcag cacttatttt agatgatagt atgacagcta gaaaacgcgt
     3001 taaagaaatg atgcaacaaa tgggcttcca agtaattgaa gctaaagacg gagttgaagg
     3061 cttaaataaa cttgaagaac tcagtcaagt ttatggagaa aacttaagct ctgtattaaa
     3121 aattatcgta agtgatgttg aaatgcctca aatggatgga tttcattttg ctgcacgcat
     3181 caaagaagat gcaagattta aagatattcc tatagtcttt aactcatctt tatctaacga
     3241 atttatgaat gaaaaaggtg ttcatgaagc cggtggcgaa agctatttgg ttaaatttaa
     3301 tgcaagtgat ttcttcaatg aaattgctaa agtcatcaaa aaacaccaat ctcaagaaca
     3361 ggggtaaaat atggaagata tgcaagaaat acttgaagac tttttggttg aagcttttga
     3421 gctagttgag caaatcgacc atgatttagt ggagcttgaa acaaatccag aagacttaga
     3481 attattaaac agaattttcc gtgtagcaca cactgtaaaa ggctcttcaa gctttttaaa
     3541 ttttgatgtt ttaacaaaat taacacatca tatggaagat gttttaaaca aagcaagaca
     3601 tggagaatta aaaatcactc cagatattat ggatgttgtt ttagaatcca tcgatagaat
     3661 gaaaacctta cttaactcta tacgcgataa cggcaatgat acagctatag gaatggatat
     3721 agaaccaatt tgtgcaagat taacagctat atcagaagga gaatctccaa atggcgttga
     3781 aaatgaaact cctgtagaag ctcctcaaaa ggaagaacca gctcctacac cagaacctga
     3841 agtagatgtt aatcaattaa gcgattctga agttgaagcc gaaatagaaa gattactaaa
     3901 agctaggaaa gcagaagatc aagcacgtcg tgctcagaaa aagcaaaata ctgcagcttc
     3961 tacaacttct aaaccagcag caagcacacc aaaagctgaa aatatggaga aaaaagttcc
     4021 tgctagtgga ggcggtggag gcggtatgga tcaaaccata cgcgttgaag taaaaagatt
     4081 agatcactta atgaatctaa ttggggagct tgttttaggc aaaaaccgtt tgcttaaaat
     4141 ttacgatgat gttgaagagc gttatgaagg agaaaaattc cttgaagaac ttaatcaggt
     4201 tgtaagtcaa ttaagtatta ttacaactga tgttcagctt gctgtgatga aaacaagaat
     4261 gcaacctata gcaaaagttt tcaataaatt cccaagagtt gttcgtgatt taagtcgtga
     4321 attaggaaag caaatagaac ttgaaattac aggtgaagaa actgaacttg ataaatctat
     4381 cgtagaggaa attggcgatc ctatcatgca tatgattaga aattcatgtg atcatggtgt
     4441 tgaggatcca gcaactcgtg cagcgaatgg aaaacctgaa aaaggtatag tccaacttaa
     4501 agcttacaat gaaggaaacc atatagttgt agaaattacc gatgatggta agggacttga
     4561 tgcaaatagc ctaaaagcta aagctataga aaagaatttg attaccgaaa gagaagcaga
     4621 tcaaatgaca gacaaagaag cttttgcttt gattttcaag cctggttttt caactgcggc
     4681 taaagtaaca aatgtttcag gtcgtggcgt aggaatggat gttgttaaaa ccaacatcga
     4741 aaaacttaat ggggtaattg aaattgatag tgagttaggt aaaggaagtt cgtttaaact
     4801 taaaattcct cttaccttgg caatcattca atctttactt gtaggaactc aagaggaatt
     4861 ctatgcaatt ccacttgcaa gcgttcttga aacagttaga gtgccaattg atgatattta
     4921 cactattgaa ggcaaaaatg tattgcgcct tagagatgaa gtactttctc ttgtaagact
     4981 ttctgatgtc tttggagtta aacaagtgct tgaaagcggt gatcaaactt atgtcgttgt
     5041 tataggggta gcagaaagca agcttggtat tatagtagat actcttgtag gacaagaaga
     5101 aatagttatt aaatctatgg gcgattattt acaaaacatc caaggtatag caggtgctac
     5161 tatccgtggt gacggtagag taacacttat catagatgta ggcgctatga tggatatggc
     5221 aaaagaaata aaagttgaca tcaaagctca gattgaatca agtgctaaaa aaccaaaaga
     5281 aaaaccaagt gattacaagg tcttaatcgt tgatgattct aaaatggata gaactttaat
     5341 gcaaaaagct ttagaaccgc taggagttag tcttattgaa gctaccaatg gcgttgaagc
     5401 attaaatatt ataaaatcgg gcgatcatga tattgatgcg atattaattg atatcgagat
     5461 gccaagaatg gatggttata ccttagcggg tgaaattaga aaatattcta aatatcgcaa
     5521 tttaccgctc attgcagtta cttcaagaac aagtaaaact gaccgtttaa gaggtgttga
     5581 agtaggtatg acggaataca ttaccaaacc ttattctcca gaatatttgg aaaatgtggt
     5641 tagaaaaaat ttgaaactag gataagaata tgagtaatga aaaattagag caaatattgc
     5701 aaaaacagca aactcagata gctggtcctg ttggtgatca aaaagaagat gatatcatac
     5761 aacttgtagg ttttgtcgta ggagatgagg aatatgctat tccaattctt aacatacaag
     5821 aaatcatcaa acctatagaa tatacaaggg ttccaagcgt tcctgattat gttttgggtg
     5881 tatttaatat gcgtggaaat gttatgccat taattgattt ggcacagcgt tttaatctag
     5941 gaagttctaa aatgactcct caaactcgtt atattgtttt aagaggcgaa tccaatggaa
     6001 gtggtgttgg aggaaatgcg ggctttgtaa tagatagact aaccgaggct atcaaaattc
     6061 atagaaaccg tatcgatccg ccacctgaaa ctttggtaaa agataagggt atgatctatg
     6121 gtataggcaa aagagatgaa aatatcctta ccatacttaa agttgaagcc ttacttaagc
     6181 gtgaatttta atgataaaac tttgtgtttt tgattttgat tccactttga tggatggaga
     6241 aactattgat atattagcta aggcttacga caaagaaaaa gaagtggtgg atatcactca
     6301 tcgcgctatg gcgggtgaac ttgatttttt tgaaagtctg caagagcgtg tcagttttct
     6361 aaagggaatg ccttatgatc ttgttcttaa aataggacaa gatcttccat tgatgaatgg
     6421 agcttatgag cttattgaat ttttaaattc taaaaatatt tttgttgtta tttttagtgg
     6481 gggttttcat gaaggtattg atcctgctat gaaaaaacta aaagtaaatt taggctttgc
     6541 aaattatcta catcataaaa ataatacttt atcaggacta gtgggcggag aaatgatgtt
     6601 ttcaaattca aagggtttaa tgctgcaacg cctcaagaac tttttaaatt tgcaaactca
     6661 tgaagtcatg tgtgtgggcg atggagcaaa cgatatcgct atgtttaatg aaagcggttt
     6721 aaaagtcgca ttttgtgcta aagaaatttt gcgatcaaaa gcagatattt gcgtagacaa
     6781 taaagacttg aaagaaataa taaaggtaat ataagatgaa aaaattttct ctttggtgtg
     6841 attttataga aaatagtttt ttagatgatg attttttaaa tttactatct cgcggtgtca
     6901 atggagcaac ttcaaatccc gctattttta aaaatgctat tttaaattcg cctatctaca
     6961 aagaaaaaat agccaaatta aaaggaaaaa aggcaaaaga aatttatgaa gaacttgcta
     7021 ttgctgacat acaaaaagca gcagacaagc ttgctccttt atatcacacg ggaaatgatg
     7081 gttttataag tcttgaaatc gatccgagat tttatgataa tacaagctta agtttgggcg
     7141 aagcaaaaaa actttatagt gccattggta aagacaatgt gatgattaaa gttccagcaa
     7201 ccaatgcttc ttatgaagta atgtatgaat tgatgaaaaa tggcatcagc gtaaatgcta
     7261 ctttaatttt ttctttagag caaagccaaa aatgctttga agctttaaat gcaggtttga
     7321 ttgaatttag aaaaaacaat atagccttgc aaggaaaaaa tactcactta agaactccgc
     7381 aagctgttat aagcatcttt gtaagtcgtt ttgatagact tttaaattct aaagcaaaag
     7441 aacaaaatcg tataggaatt ttaaatgcaa atttagccta taataatatc atctccaaaa
     7501 acgaacctaa tatccgagct ttatttgcaa gcacgggtgt aaaaggcgat gatttaccaa
     7561 aagattatta tatcaaagaa cttctttttg aaaatagcat aaatactgcc ccactagatg
     7621 ctatcaatgc atttaaaacc gaaattgaat ttaaaaaacc tttaatgaat tttgaaattt
     7681 acacacaact taatgctatt atttcacaaa atgaaagaga aaaagcttgt gatgaattac
     7741 taaaagatgg tttagagcaa ttttgcatag cttttgaaga aattttacaa gcactaaact
     7801 aacgaatttt tttaagcttc ttacgatgaa gttttattat ttttgatggg gtattttcaa
     7861 caaatatctc atcaaccaca acatctgcga cacttctagc ccaaagctca tcaaattttt
     7921 gtccgtgctt gtttgcagaa cttgaataaa aacaacccat tttttctaag aattgtgcgt
     7981 gtttgcaatc tttgacaatt cttactgctt gattgtttgg ataaataaaa gttgtttttt
     8041 tggcacgacg cacccagttt ttaaattgat ttggaactct tacgattttt tttaactcgt
     8101 caaattttgc agaagtgatc aagcagggct gatctttagc cctgcctttt aaagcattga
     8161 tttcttctaa atttttactt aaaaatcctg ctgtagtatc tgtttgcgct agataaatca
     8221 agcttttaaa tactcctgca ggcttttaac ttctaaataa ctttgatttt gtatcgcttt
     8281 aatcgatttt gcacccgcaa gagctgaacg caaatttgta aaataaggga ttttaaaacg
     8341 gataatattt tcacgaattt ttttcgtatc ccctgcaaaa gtatgactat cacttgtatt
     8401 tatcactagc tgaatttctc catttttcag cttgtcttcc acatttggac gcccttctga
     8461 aattttatgt acaagctcac actcaaaacc agtttctaca atttctttac aagttccact
     8521 tgtagccatt agtttaaaac ctaatttaga gtattcactc gcaagttttt tagcatactt
     8581 tttatctttt tcttttaaag aaatgaaaac cactccactt tctggcaaat gattaaaaga
     8641 tgaaatttga cttttcgcgt aagaattggc aaaatcctta cttatgccca taacctcacc
     8701 tgttgatctc atctcaggtc ctagctctaa atcacttcca ctaagcttag caaaaggaaa
     8761 taccgcttct tttacgctga tatattttga aggcttagga cgtaaaatcg cattatcaaa
     8821 attcaccaca ccaaaagcat cataaaattt taaagcttct tttaaattcc cctgccacat
     8881 tacgcgtgtt gcaacttttg ccaaaggtat acctgtagct ttgcttacaa aaggtacggt
     8941 acgacttgct ctaggattta cttctatcat ataaagttcg ttattgtaaa ttgcaaattg
     9001 tatatttaaa agtcctacaa cgcctaaatt taaagcaata tctgcggttt tttgtacgat
     9061 ttgttcttgc attttttcat caatattgca aggtggcaaa gaacatgcgc tatcacctga
     9121 atgaattcct gcttcttcaa tatgctccat aattcctgct acataaacat ctttaccatc
     9181 actgatagca tcaacatcga tttcagtcgc attatctaaa tactgatcga tcaaaacagg
     9241 acttttatcg cttacatcca cagcttcttg catataaagt ctaagttcac tctcatcagt
     9301 aaccacacgc atagctcttc cgcctaaaac ataacttggt cttacaagta caggataacc
     9361 tatctcgctc gcttttaaaa ccgcttcttc tacgcttgta gcggtagaat ttttaggttg
     9421 attgatacca agttttgtaa taaattcagc aaatttcttt ctatcttctg ccatatcgat
     9481 cactcttgcg cttgtgccta tgattttagc cccaaaagca ctcaagcgtt tagcaaattt
     9541 aagcggagtt tgaccaccaa aatgcactat aactccatct ggcttttcgc gttcaattac
     9601 accacgcaaa tgctcaaaat caataggttc aaaatacaaa atatcactcg tatcataatc
     9661 tgtagaaacg gtttctggat tgcaattata cataatagtt tttacgccta aatcctttaa
     9721 tgcaaaagaa gcatgcacac aagcatagtc aaattctatc ccttgtccta tacgatttgg
     9781 ccccccgcct ataatcatca cttttttttc ttttttatct cttgcttcat ttttgctttg
     9841 agtaagttca cttacattga tactagaata aagataagga gttaaagctt caaattcccc
     9901 tgcacaagta tctacttcgc taaattctgc tatgattttt tgcttcattc ttgcataata
     9961 gatatcattt tgacttaatt ctaaattatc ttttagattc acaagcaagg cgatcatctt
    10021 gtctgaaaaa cccatagttt ttgcttttct taaaagggtt ttgttatgca agatatccat
    10081 atcaatttgc tcttcaaaat ctacgatttc tttaatttgg gataaaaacc aaggatcaat
    10141 tttacaaagc tcataaagct cttttacatc aaaaccctct ctaaaagctt gcgctacata
    10201 aagcaaacgc ttttcgttag cgttgcgaat tttaaagata agatcgtttt tatcttcaaa
    10261 tttcactcta tcaaaaccac ttaaatttct ttccaaagaa caaagtgctt tttgtatact
    10321 ttctttaaaa gttcggccaa tcgccattac ctcacccacg cttttcatcg ctgtgcctaa
    10381 agttgtattg gctcctggga atttctcaaa agtaaaacga ggaatttttg taacaatata
    10441 atcaatcaca ggttcaaaac tagcaggagt gccggtaata tcatttttta tctcatctaa
    10501 gctaaatcca atcgccaaaa gtgttgcaac ctttgctata ggataacccg ttgctttaga
    10561 agctagggcg cttgatcttg aaacccttgg attcatttca ataactatca ttctaccatt
    10621 tgttggattg acagcaaatt gcacatttga tccacccgta tcgacgccta tttcacgcaa
    10681 aatggcaaaa gaggcattac gcataacttg gtattcttta tcagttaaag taagagcagg
    10741 tgcaaccgtg atactatctc ctgtatgcac tcccatagga tcaagatttt ctatactaca
    10801 cacgataatg caattatcat ttttatcgcg gataacctcc atttcatact ctttccatcc
    10861 aagcaaactt tcttcgataa gaatttcatg gattggcgaa agtgctaagg cagcattagc
    10921 gagttcttta aattcatcca tattataaac cacaccgctt cccgtaccac ctaaggtata
    10981 agaagcacgg atcattaaag gaaagccgat ttcatctaca gcttttaaag cttcatcata
    11041 attatacgcg tacatagatt ttgacaaatc catgccgatt tttttcatac attctttaaa
    11101 aacttgacga tcttcgcctt ttttaatcgc ttcagggttt gcacccaaaa acttcacatc
    11161 acctaaaagt ccgctttcat aaacttccat agctacattt agagccactt gtccacccat
    11221 ggttggcaaa atggcatcga ttttctcttt tttaataata cttaaaatac tttccttggt
    11281 tacaggctct atataagtag catcagcaaa ttcaggatca gtcataatag tcgctgggtt
    11341 agaattgatt aaaactacgc gatacccttg ttcttttaaa gtttttgctg cttgagttcc
    11401 tgaataatca aattcacaag cttgacctat aacgatagga ccacttccta taagtaaaat
    11461 atttttaata tctgttcgtt ttggcatgaa ttttcctaag agcataaatt tgggctgatt
    11521 ataacaaatt ttagttttac aaactttgaa attctgttat aattttaaaa aaataggcaa
    11581 gaaagaaata ctcatgaaaa aaattaaaat tttagttttt ttaatatttt tttgtcaatt
    11641 ttccgtttta gcaaataatt taccccaaaa tataaaagaa aatttaggca ttaatcaatt
    11701 cttggacgag agtttaaaag aaattttaaa tcagccctta aaggaacaat ttgctcttac
    11761 tccaaagggg gaatattttt tcgagggtaa tttaagtctt tttcaaaaac aatgcttaga
    11821 aaataatgcc accgcatatg cttattagga agagaatttg cagcaaacac gagacttcct
    11881 ttggatttaa acaaagcttt attgcttttc caaaaagctt gtaaacttgg gagattagac
    11941 tcttgcgtga gaatcaacaa tataaaattt aaattactga aaaagttaga tgaagaaact
    12001 tatcaaagca atttaaaata ttttttagat caaaactcaa gttttgcttt attagaacat
    12061 atcactacgc ttagtaaaca agatataaaa tcagcaatta tactagccaa aaaagctgcg
    12121 agcaaggcat gatgctattt gtgcaggact ttcttatatg tatgcatgcg gacaaggggt
    12181 agaaaaagac ttaatcaaag ctaaagaatt aagctctaaa gcttgtgaaa aagatacaaa
    12241 gttgtgcttt gcgcaaggct gggttgaatt atttaatcaa aatgatattt tagcccaaaa
    12301 acttttttat aaatcttgtc aggctggata ttatactgat tagaatatgg cagttgatat
    12361 aaattccaaa gatcaagcta tgcaattata tcttattaaa atcacacaaa aaaatagtca
    12421 aaatcaatgt caaaactcaa gcaataaaca atcttttgct tgccataaag catctgctct
    12481 ttctaaagaa attttaaaaa tccaattgaa aaaaatttct gaaaaactgc tttttacaat
    12541 tttaatttaa attcatgaac aaaaatagca aaaagtatga aaactccacc taaaatttgc
    12601 aaaaatgaaa cactttgagc caaaaacaaa aacccaaaaa gcatagcaaa taaaggctcg
    12661 ctaagttcta taagctggac tgaatttgac tttgcaagac ttaaggctct agtagtgcag
    12721 taaaatccgc ctatagtagg caaaaacgcc aaagctaaaa tcaagataag actctctaaa
    12781 gaaaaattaa gatttaaatt tgctccaaac aaaggaatac tcaaatacaa acttcctata
    12841 aaaagcaaag cacaaagagg aattaaccca aaacccagtt ttaattttct agtaaaaaat
    12901 aaaaataaag cataaccaat ccctgctaaa atagcattta caaggccttt taaatgagtg
    12961 aaattttcca aagttccacc ttcggccaaa aaaatcatcc aaagccccaa aagtgcaaaa
    13021 accatagcca aaagctcatt taaatgaaaa aagcgtttag cgtccaatgc ttcacaaata
    13081 aaagtgataa tcatccccac accaaaaagc acaaaaacta cattagccac acccatactt
    13141 gtgtaagcag cactctcaaa atgataaagc ataaaaaatc caaaaaaagc aagaagcaaa
    13201 agtgtgaaaa ttttctgctt gataaaaact agcaaagcgc ccaattttct catataaatt
    13261 aaaatcgcaa acaaaatcac actagccaca aagcatttat aaaaagctac ttctgaactc
    13321 ataaaacctt ttttaaaaag aaaaacgcta aaaattccaa caaaagcgtt aaatatagcg
    13381 gctaaaaaag caaaaaagaa agcttgaaat ttaggatttt ttagcatatt ttaagctcct
    13441 ttttaattat ttttttccat agagaggaag ctttatttga agagctaaaa atacctccca
    13501 tattagagtt taaaagtctg tattcttcat ttttacataa aatattatga gctttatcta
    13561 aattccaaaa aggaatattt gcaaacaaat ggtggattaa atgataattt tccttatgta
    13621 agccagtaaa aaataattca attttattgc caaatctatt ccaagatttt tctatttctc
    13681 ttttgttttt tataatagga aaatgttctg ccatctctat aaaatgtcct accataggaa
    13741 aacttgtaag taaaggcaca aaccaataca ttaacaaaat atcaagaaca ttaacataaa
    13801 aacaaatacc aaaaatagca atccaaaata aaataagata tttaatttct ttatccttaa
    13861 aatcacccaa gcgatttctt ataagataag aaataaaatc aaaagtctta cccaaaaaca
    13921 aaggcaagat aaggtgccta aaaataaatt cttttaaaga acgggaagca aaaagctttg
    13981 attgtatata aaaatcataa tcaggatctt tattttcaat tcctaaaaaa ccatgatgtt
    14041 taataacatg actttgtctg tatttttcaa aagtctgaaa aataagatat ccgcttggat
    14101 atttacctaa aaaatcattt aattttctat tttttgccag tattctatgg gctgactcgt
    14161 gtaaaatagt cgctaaagcc ctttgtctcg tgccaataaa taaaactgca aataaataca
    14221 taaaaatgtt gtgcataaaa caagaaatgg ctattgtcaa aataatttgt aaataatccc
    14281 ataatacagc aaaaattcca tgatagttat caagtttata aagcacttta agttctttta
    14341 gaatagtttt ttcaaataac atttttaatc ctaaatcatt atattaacta tattaaacac
    14401 aagactagaa tagtcttgtg tctgccttaa cccaaccaaa aaagatcgct aaattcatta
    14461 aaattcattt gctctaagct cttttgatct tcgcaaattt gcatgatttt ttcacattgt
    14521 tttggactta aacgcgcagc aagattggct ttaaatttag caattaaaag cggaattcct
    14581 tcacttctgc gtcttttgtg tcctatagga tactcaactt cgactttttt tgtacttgtg
    14641 ccatctttaa agaaaacttg cacggcatta gctatgcttc ttttatcgct ttctaaatac
    14701 tcttttgtat agcgatcatc cacttctact tgcatcttag ctcttaaagc atcgattctt
    14761 tcatcgcttg caacactatc ttcataatca tctgcattca aacgcccaaa tataagtggc
    14821 acagcaacca tgtattggat acaatgatcc ctatcggcag ggtttgcaag ctcgcctact
    14881 ttgttaatga tgcgatgtcc tgattcttga gttgtgatga tgattttttc tatttgctct
    14941 aaacgatctt ttacctcatc atgtaaagct aaagctgctt ctactgcagt ttgtgcatga
    15001 aattcagctg ggaaagaaat tttaaataaa acattttcca ttacataaga accaaattct
    15061 tgaggaatag taagtttttg tcctttcatt ttcacatctt cataacccca aaatttagca
    15121 cttaaagctg aaggataacc catttctcct gttttagctt ttaaagcaag atctacacct
    15181 ctacttgaag catcacctgc tgcccagctt tttctactac ctgtatttgg cgcatggcga
    15241 taagttctta aagctccacc gtcgataaag gcatgagaaa tagcattgcg aatttcttca
    15301 aaatcacaac ccaaaagctt tgcagctact gcagtgcttg ctattcttac aagtaaaaca
    15361 tgatccattc ctactttatt aaaacaattt tcaagcgcca aaactccttg aatttcatga
    15421 gcttttatca tggcttttag gacacatttt acttttaaag gctcttttcc ttcgctgata
    15481 tttttacgac ttacataatc agccactgcc caaatcgcac ctaaattatc gcttggatgc
    15541 ccccattcag ccgcaagcca tgtatcatta aaatcaagcc atcttaccat agcacccaca
    15601 ttaaaagccc cacggattgg ctctaattga taagatgttc caaacacttt tgcacccaaa
    15661 ggtctaaatt cagccccttc aacacttggt cctaaaagct tggtgcaagc aggatattta
    15721 agcgctaaaa gcccacaacc tatagtatcc atcaaacaat atctagccgt ttctaaagcc
    15781 aaatcacttg tgatttcaaa ttcatcagcg tattttgcaa tttttgttaa aagttcatca
    15841 aattcagggc gttttgcctc taaaattccc atatcactca ttttttctcc ttatctgtct
    15901 tgaattttta caaattttct tggttcaacg cctatatatt cactacttgg gcgtataagt
    15961 ttattgtttg ctctttgctc tttaatatgc gcacaccaac cacttacgcg actcataata
    16021 aaaatcggcg taaaatactc agttggaatt cccataaaat gataagctga tgcactataa
    16081 aaatctgcat taggtggcaa acttgggcgt ttttctttca tcaaagcttc tatgacttca
    16141 ctgattttaa aaagcaaatc atcgccccct aaatgcttac tccaaacctt aataagtgca
    16201 tttctaggat cacctccaag tccataaaca cggtgaccaa aacccattaa aagctcttta
    16261 ttttctaatt ttttattcac accctcaatg gcatcctcaa cacttttaaa actttctatt
    16321 aagtgcatcg ctgcttcatt tgctcctcca tgcaaaggcc ctcttaaagc tccaatagcc
    16381 gcagcaaccg cactaaaaat atcacttttt gtagaagcac aaattctagc tgtaaaagtt
    16441 gaagcattaa attcatgctc tgcataaagg attaatgagc attgcatagc cttgataaaa
    16501 tcttcttttg gagcttcaag ttttaatttt tccaaaaaat atcccgctat acttgtttga
    16561 ttggaatcaa aatcaatttc tttaccaaaa ttcacataat gatgccaata acaaagcatg
    16621 ctcggtaaaa ttcccaaaag tctgatgatt ttttcatctt gatcgctaaa atcctcattt
    16681 tcaccctcta aagctcccaa tgctgcaaca gctgtttgca tcaaattcat aggatgaact
    16741 tctttaggta tagcttttaa aacgtttttt aaattttcac tcaaagctct ttgagcaatg
    16801 attttttctt tataattttc caattctttt gcgttgggta attctccaaa ctgaagtaaa
    16861 taagctattt cttcaaattc tgcattttgc gctaactctt ctatgctata accataataa
    16921 tttagtccat ttccaagccc gcaagtacaa attgcacttt gtcctgcgat aactcctgcc
    16981 aatccacccg tttttttagt tgcttcactt atactcattt tgcacccctt ttaaataatt
    17041 cgtctaattt ttgctcataa gaataataat ctagcatttc ataaagctct tctctagttt
    17101 gcataatctc aagaacatct ttttgatgtc catttttcaa tatgctttca taaacttgca
    17161 ctgcagcttt attcatcgca cgatttgcac ttaaaggata cagcaccata gacactcctg
    17221 ctctatttaa ttcttctttg gtaaaataag gagtctttcc aaattctgtg atatttgcaa
    17281 gaattggaac ttttacattt ttaacaaatt cttcatattc ttctaaactt gtaatagctt
    17341 cagcaaaaac catttcagct ccagcctcaa catatgctaa agcccgttcg atagcttttt
    17401 gctgaccttc aattgcatgc gcatccgttc ttgccataat cacaaaatca ggatcgattt
    17461 ttgcatctac tgctgcttta atacgatcac acatctcttc agtgcttact aattctttat
    17521 taggacgatg tccgcacctt ttttgagcca cttgatcttc aatatgagtt gccgctgcac
    17581 ccgcacgaat taattctttt atcgttcttg caatattaaa agcacctcca aaacctgtat
    17641 ctgcatcaac taataaaggc gtatccactc tagagcaaat gcgtcttaca tcaatgcata
    17701 cttcttcaag tgcgataatc cccaaatcag gcaagccata actcgcgctt gccacgccac
    17761 ttcccgaaag atataaagct ttgtgtccta ttttagtagc ttgtaaagca ctataagcat
    17821 tgacagctcc tactatggtc aaaggtttgc ttgtctttac taattcttta aatttttttc
    17881 ctgcactcat tatttttctc ctttattttt tgggtatcct aaagcattaa tagctttttc
    17941 gcaagctttt aaaacattac tatcctctat agtagctgga acatttaagg ttgaaccatc
    18001 agctatttct cttaaatttt tacgcaaaat ttttccactt cttgtcttag gtaaagcact
    18061 aacaactgtg gcaattttaa acgaagctac ggctccaatt tcttgacgca ccaaagctac
    18121 aactccttca actatacccc tatgatctcg ctctataccc tcttttaaaa cgataaagcc
    18181 cataggtatt tcacctttaa gctcatcatt tacacctata accgcacatt ctgcaacatc
    18241 aggatgtttt gctataatct cttccatttc tccagttgaa agtctatggc ctgcaacatt
    18301 gatgattcca tccattcttc ctaaaacata cacatagcca tctttgtcga tatagcctgt
    18361 gtctcctgtt agataatagc ctggaaattg atctaaatat cccctacgat atctttcatc
    18421 attctcccaa attcccatta aacaagctgg aggtaaagga agttttaggc acaaaattcc
    18481 tttttttcct gctccaagct cttgaccttt ttcatctaaa accttaagat taaatcctgg
    18541 cataggtttt gtaggacttc ctgctttaac aacttgtgct tccaagccca aaggattagc
    18601 cgcgatcgcc caacctgttt cagtttgcca ccaattatca atcacaggtt tttttgtaag
    18661 cttttctatc catttaagcg tatcgctatc gcatctttca cctgccacaa aaatagatct
    18721 taagctatca agattaaatt ttttaatcca ttctccttta ggatcttctt ttttaatcgc
    18781 cctaaaagca gttggggctg aaaaaagcac attcacttta tattcttcaa taattctcca
    18841 aaatgctgaa ggattaggcg ttcttacagg ttttccctca taaactatag ttgtacatcc
    18901 attcatcaaa ggtgcataaa ctatataaga atgtcccaca acccaaccta catcagaagc
    18961 ggtaaaaaag acatctcctg ctttagcatt ataaatatta tccatcgacc atttcatagc
    19021 cacagaatga cctccattag agcggattac tccttttgga gaacctgtgg tgcctgaagt
    19081 ataaagtata taaagcggat cggtagctaa aacaggtaca ggatctacac cccgagtttt
    19141 ttcctcttca agctcccaat caatatccct ccaaggaagc atatttgctc tatattgtgg
    19201 gcgttgccaa atcaaacaag tcgtaggctt atgagtacat tttttaatag cctcatctaa
    19261 aataggttta tactcgataa tgctacttac ttctatcccg caacttgcac tgataatcat
    19321 tctaggttta gcatcttcta tcctcgtagc aagttcatgt gctgcaaagc ctccaaatac
    19381 aacactatga atagccccaa gcctagcaca agcaagcata gctataagtg cttcaggtat
    19441 cattggcata taaataacaa cgcgatcccc tttaaccacg cccttgtttg ctaaaattcc
    19501 ggctactttt gcaacacgat cacgaagttg cttataagta tattttttct ttgtatccgt
    19561 aacaggagaa tcataaatca gtgctaattg atcgcccctg ccattgtgta catgtaaatc
    19621 aagcgcatta taacaagtat tcatacaccc gccaacaaac catctgtaat gcccatcgct
    19681 atcatcaagc accctatccc attcattata ccaatgcact tttttagctg cttcagccca
    19741 aaatgcttca ggattttgaa gagattctcg ataagtctgc tcataaacaa tacccataat
    19801 ccatcctttc ttgataagtt gaatttgcat tatagagttt ttgtttgaaa aataaaatgc
    19861 caattttttg gtttaattgt gtgattttgt agctaaaaaa ataaattttg tatatttttt
    19921 gaacaaaatt tta
//
LOCUS       DBBXOW010000029        19879 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.030, whole genome shotgun sequence.
ACCESSION   DBBXOW010000029 DBBXOW010000000
VERSION     DBBXOW010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19879
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.030"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1766)
                     /gene="pglF"
                     /locus_tag="ACJE1S_000981"
     CDS             complement(<1..1766)
                     /gene="pglF"
                     /locus_tag="ACJE1S_000981"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HGG0806541.1"
                     /translation="MDFYKSKRLIFFLCFDAFLFILSIFLAFSLRFSGEIPSIFYEGM
                     IKAGLILLVLKIAFLFIFRIYKVAWRFFSLSEARKIFFALVLAEICFLLIFYFYDDFF
                     NPFPRSVIGIDLILSYMFVGTLRISKRMLIDFKPSRAKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARRELIGTYCDKFIVEDKSKIKDYVNEGVKTAIIALKLDQAE
                     LKALFEELIAYGISDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVASFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMLDHSEFNLYKINEDLSLYKEKITPVLLSILDEQ
                     SLDEIIKEYKPELILHAAAYKHVPLCEQNPHSAVLNNIVGTKTLCDVAKKNKVKKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLNSSDENFEVSCVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVSEAVQLVLQAGAIAKGGELFVLDMGEPVKIMDLAKKMLI
                     LSNREDLEIKITGLRRGEKLFEELLIDENDAKTEYESIFVAKNEKMDIQILNDYIKKL
                     QDCQNIAEILKEIVPEFNHNKDG"
     gene            complement(1769..2929)
                     /gene="pglE"
                     /locus_tag="ACJE1S_000982"
     CDS             complement(1769..2929)
                     /gene="pglE"
                     /locus_tag="ACJE1S_000982"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HGG0806542.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEESVKDY
                     AQCENALALNSATAALHLALRVAGVEQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETFNIDIDLLKLAIKESEKKPKALILTHLYGNAAKMDEIVQICEKENIILIEDAAEAL
                     GSFYKGRALGTFGEFGAYSYNGNKIITTSGGGMLIGKDKQKIERARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGDSFVFLDELENS
                     RSNRWLSTALIDFDKNEMNAYQKCIEISQKDLILHPKISKLITDLQKEQIETRPLWKA
                     MHTQEVFKGAKAYVNGNSELFFKKGICLPSGTAMSKDNVREISELIIKSVKA"
     gene            complement(3084..3671)
                     /gene="pglD"
                     /locus_tag="ACJE1S_000983"
     CDS             complement(3084..3671)
                     /gene="pglD"
                     /locus_tag="ACJE1S_000983"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HGG0806543.1"
                     /translation="MARTEKIYIYGASGHGLVCADVATNLGYKECIFLDDFKGKKFES
                     SLPKYDIFIAIGNNEIRKKLFNQISDSGFKIVNLIHKSAIISQSADIAEDAGILIMPY
                     VVVNAKAKIKKGVILNTSSVIEHECEVGEFSHISVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKSQSEKGVFVGVPAKRM"
     gene            complement(3658..4260)
                     /gene="pglC"
                     /locus_tag="ACJE1S_000984"
     CDS             complement(3658..4260)
                     /gene="pglC"
                     /locus_tag="ACJE1S_000984"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HGG0806544.1"
                     /translation="MYEKWIKRIFDFVLALFLLVLFSPLILITALLLKITQGSVIFTQ
                     NRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            complement(4253..5383)
                     /gene="pglA"
                     /locus_tag="ACJE1S_000985"
     CDS             complement(4253..5383)
                     /gene="pglA"
                     /locus_tag="ACJE1S_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HGG0806545.1"
                     /translation="MRVGFLTHAGASIYHFRLPIIKALIARGDEVFVIVPQDEYTEKL
                     KALNLNIVVYELSRASLNPLIVFKNFLHLKNVLKNLNLDLLQSGAHKSNTFGLIAAKY
                     AKIPYKIGLVEGLGSFYIDKGFKANLVRFVINTLYKLSFKIADSFIFVNQANADFMRN
                     LGLKENKICVIKSVGINLKKFFPMRVEQEAKKAFWQNLKIDEKPIVLMIARALWHKGV
                     KEFYESAEYLKDRANFVLVGGRDDNPSCASLEFLNSGKVFYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKVIVVSDCEGCVEAISNAYDGLWAKTKDSKDLIEKIQV
                     LLEDESLRINLGKNAAKDALQYDENVIAQRYLELYDRVIKNV"
     gene            complement(5395..7539)
                     /locus_tag="ACJE1S_000986"
     CDS             complement(5395..7539)
                     /locus_tag="ACJE1S_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004576 - oligosaccharyl transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STT3 domain-containing protein"
                     /protein_id="HGG0806546.1"
                     /translation="MLKKEYFKNPTFILLAFIILAYVFSVLCRFYWIFWASEFNEYFF
                     NNELMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTLTYWFYKITPFSLESIFI
                     YISTFLSSLVVIPLILIANEYKRPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVL
                     AMMIVFFMIRLILKKDLLSLITLPLFVGIYLWWYPSSYTLNVALLGLFFIYTLVFHIK
                     EKTLYMAIILASITLSNIAWFYQSAIIVILFSLFVLQNKRFSFALLGILGLATLVFLI
                     LSGGVDPILYQLKFYIFRSDESANLAQGFMYFNVNQTIQEVESIDLSIFMQRISGSEL
                     VFFVSLIGFIFLVRKHKSMILALPMLALGFLALKSGLRFTIYAVPVLALGFGFLMSLL
                     QERKQKNNNTYWWANIGVFIFTFLSLIPMFYHINNYKAPTVFSQNEATKLDELKKIAQ
                     REDYVVTWWDYGYPIRYYSDVKTLADGGKHLGKDNFFPSFVLSKDQVAAANMARLSVE
                     YTEKSFYAPLNDILKNDLLQAMMKDYNQNNVDLFLASLSKPDFKINMPKTRDVYIYMP
                     ARMSLIFSTVASFSFVDLETGEINKPFTFSAAYPLDVKNGEIYLSNGIALSDDFRSFK
                     INNSTISVNSIIEINSIKQGEYKITPIDDMAQFYIFYLKDSTIPYAQFILMDKTMFNS
                     AYVQMFFLGNYDKNLYDLVINARDAKVFKLKI"
     gene            complement(7543..8640)
                     /locus_tag="ACJE1S_000987"
     CDS             complement(7543..8640)
                     /locus_tag="ACJE1S_000987"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG0806547.1"
                     /translation="MQKLAIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EISECKIHFLERSKPSENPILKFLKLPFLALKYKKLCQKLNIDTEFVFLNRPNYIALM
                     AKIFGNKTRLVINECTTPSVMYAKNNFNSLANKLLITLLYPRADLILPNSKGNLEDLL
                     CNFKIDKAKCEILYNAIDLEKIEQKALEDISLKDKFILSVGRLDEGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKDLNLEDKVLLLGFDNNPYKYMSKCEFFAFASVFE
                     GFSNVLIESLACGCAVVCTDHRSGARELFGDDEFGLLVEVNNENSMFMGLKTMLEDEN
                     LRKAYKKKAKDRALDFDKAKIARNALKYLLG"
     gene            complement(8628..9557)
                     /locus_tag="ACJE1S_000988"
     CDS             complement(8628..9557)
                     /locus_tag="ACJE1S_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG0806548.1"
                     /translation="MPKLSVIVPTFNRSSLLQKAVQSILNQDFKDLEIIISDDNSSDD
                     TKSVVENLQKSDKRIKYFLNQNYKQGPNGNKNNGLDKASGEFITFLDDDDELLPYALG
                     VLMQKVDEGYSHVFGNCLIEKEGILSDEFSGKGLQKEDEISKKDFLMQRFSGEFFSVF
                     KASLLKNKRFNEEFYGNEATLWVNLYEEKSFYIHKAFRIYRVFRKDSVTLGASKNAHR
                     VHLGYLELAKILENELKASGDDDYRKTCASYYKMAAYYAKLSANYKALYHCLFKSLSI
                     KINAPALILLTLSIIPSKMIEKLSKIRVALCKN"
     gene            complement(9550..10626)
                     /locus_tag="ACJE1S_000989"
     CDS             complement(9550..10626)
                     /locus_tag="ACJE1S_000989"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004291478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG0806549.1"
                     /translation="MKITFIIATLNSGGAERVLATLANALCTQHEVSIIKFHVGDSFY
                     KLEENIKLITLEQFRFDTLYHKIASRFKKYLALRKALKENESDVFISFLDTTNIACIF
                     AKIGLKTPLIISEHSNEAYLKSKIWRFLRRLSYPFCDALTVLGSSDKIYYEKFVKRVK
                     LLPNPCHFSTEISLNEHFEKENLVLFIGRLDQNKNPQMFLKAIVHLDKKLQEDYEFVV
                     AGDGELRQELEYKAKSLGIRVKFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESLY
                     FEVCRISTSYYNGAKDLINDNKDGFLVGCDDEIALARKLELVLKDEQLRKNIVINAKK
                     RCEDFEISYIKKQWLELIDEVKNA"
     gene            complement(10623..12323)
                     /locus_tag="ACJE1S_000990"
     CDS             complement(10623..12323)
                     /locus_tag="ACJE1S_000990"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806550.1"
                     /translation="MLKKIFFILSKEDKKFLFSLLLFSVFISFIESFAISLVMPFITL
                     ASDFSYFDRNKYLIQLKDYLALPVFEIIVYFGVVLIVFYVLRALLNSYYFHLLARFSK
                     GRYHTIAYKVFAKFLNTDYENFTQKNQSEILKSITGEVYNLSTMISSFLLMMSEIFVV
                     LLLYTLMLLVNYKITLFLSLFMIINAFILIKVLSPIVKKAGLKREEAMKNFFEILNTN
                     LNNFKLIKLKTKEDGVLNLFKTQSEIFAKANITNESVSAMPRIYLEGVGFCVLVFIVV
                     FLVFKNQSDISGILATISIFVLALYRLMPSANRIITSYHDLLYYRSSLDIIYQILKQK
                     EESLGEEKIDFDKELRLENLSFGYKDKKNLFTCLNLSIKKGEKIAFIGESGCGKSTLV
                     DIIIGLLSPREGRVLVDKNELNMKNVKNYRQKIGYIPQNIYLFNDSIAKNISFGDEVD
                     EEKLQRVIKQANLEHFVKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLDPEILVL
                     DEATSALDTESEARIMDEIYKISKDKTMIIIAHRLSTITRCDSIYRLEHGKLFKEDKK
                     "
     gene            complement(12317..13303)
                     /gene="galE"
                     /locus_tag="ACJE1S_000991"
     CDS             complement(12317..13303)
                     /gene="galE"
                     /locus_tag="ACJE1S_000991"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG0806551.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTNHEICVLDNLSKGSKIAIDDL
                     QNIREFKFFEQDLSDFEGVKALFEREKFDAVVHFAASIEVFESMQNPLKYYMNNTINT
                     TNLIQTCIQTGVGKFIFSSTAATYGEPTTPVVSENSPLAPINPYGRSKLMSEEVLRDA
                     NMAHPEFKYCILRYFNVAGACMDYKLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLENNESNIFNVGYGHGFSVKEVIDAMKRVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKFDDLDLICKSAFDWEKQC"
     gene            complement(13360..14151)
                     /locus_tag="ACJE1S_000992"
     CDS             complement(13360..14151)
                     /locus_tag="ACJE1S_000992"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HGG0806552.1"
                     /translation="MMKNEGYICIFDCESIPDTDLIHKTLAFEGEDLEVSLKALEWQK
                     EQSGSEFLPLPYHKIVSICAVISDHYGKFIKVNKIDGENEKEMIHNFFAFIEKYEPKL
                     VSFNGKNYDMPLLVLRALKYNIKAANYLDTQSDKWNNYKTRFSELKHCDLFESFGSTR
                     GLKLDTICAMADLPGKYDVHGDEVMKLYYEDKIEKIHEYCESDVLNTYMLFLKYELIK
                     GNVSDEDYAYFLNSMSEFLKAKKANRAYVEIFCKACENEISKMKI"
     gene            14216..15244
                     /gene="waaC"
                     /locus_tag="ACJE1S_000993"
     CDS             14216..15244
                     /gene="waaC"
                     /locus_tag="ACJE1S_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HGG0806553.1"
                     /translation="MKIAIIRLSALGDIIQSAVVLQFIKKFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKDKKIIQSLKILLEARKNNYNAVMDLQGLVKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLNIDYNENVFVRYLGLTSFMLNKYFDPKDLAFKEDVFS
                     VDEKLKQLLSEKMQLTKNKKNILIHVGSSEENKIYPKTKLALLCKLIIKEFPEIKIFL
                     GWGNLKEYEFAKEVIELGAISQDNIEIAPKFSLEELIVFTKSMDLIIGNDSGPTHLAF
                     ALNRPSITIFGATPSYRNAFKTNINKIIDTGKKITNAKHLDKSDFCISTIEEEDILKL
                     VKELFGDE"
     gene            15237..16124
                     /locus_tag="ACJE1S_000994"
     CDS             15237..16124
                     /locus_tag="ACJE1S_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HGG0806554.1"
                     /translation="MNKDYLYLSAYYILKFLVYTMPHFILNFLAFCVSKIVFKLDKKH
                     RKIIDINLKLCFPYKDENERKELAFKIYNNFAKFGLDCIKNQNTSKEKILAKVVFDNE
                     EILTQALKEQKGVIFATAHYGNWELLSLAYAAKFGAISIVGKQLKSQRMTELLAKNRT
                     QFDIELIDKKGGLRKMLSAIKNKRALGILTDQNCTDNEGVRLDFFGKRVNYQAGASIL
                     AKKTGALIIPAYIYQGEDEKFHIKFFKTLDPLNSSLEELTKYQAKTCEEMIQFKPDEY
                     FFFHRRFASYDEKLYKDIK"
     gene            16121..17674
                     /locus_tag="ACJE1S_000995"
     CDS             16121..17674
                     /locus_tag="ACJE1S_000995"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG0806555.1"
                     /translation="MNLEKISVIIIVKNAQNTLFECLNSLKEFGEIILLNNESTDDTL
                     KIAKEFQKDFTHLYIYESKFIGFGALKNLALSHAKNEWILNIDADEILENEAKEELKK
                     LEFKEQNILALTRKNLYKGEWIKACGWWPDRVLRVFNKKHTKFNENLVHESLILHPNT
                     QKVYLKNGLKHFAFESIDDLLDKLQKYSKLWALQNLHKESGICKALVRGFWTFFRNYV
                     LKKGIFYGYKGFIISVCNGLGAFFKYMKLYELKKQKPKTCALIITTYNQPKRLALVLD
                     SVKNLDPLPNEVLIADDGSKEDTAKLIQEYQKNFPCVLKHIWQEDEGFRLSKSRNEAI
                     KNSLSEYIVVIDGDMILEKDFIKEHLEFAQRRLFLQGSRVILNKKESEEILNKDDYRI
                     AFNKKDFKSSKNSFLAKMLYSLSKKDEKIFKKITLIKGIRGCNMSFFKTDFDELDGFN
                     ENFIGWGREDSEFVARFLFNKGIFRRLKFKAIAYHIYHKENSKKMLESNHQIYLDTIK
                     NKKISWKNI"
     gene            17671..18723
                     /locus_tag="ACJE1S_000996"
     CDS             17671..18723
                     /locus_tag="ACJE1S_000996"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG0806556.1"
                     /translation="MKIVLLIGDITIGGGAERVVCNLANAFNELGYSVEILSFYKSKE
                     NLAYEVHKNIQISFFHIISRSKVFKKPFYKLYYKYYESYILKQKYKYADIMIYNNCSQ
                     FPFFKNKNTKHIKLIHEIFKRYQLRNNFFDNLIILSLHELSIWKQYHNNVSYIPNFTP
                     TITNKTPTLNQKIILSIGRITKEDQKGFLRLVDIWEIVQKNQSFKEWKLHIVGDGALK
                     EELFCKIKTKKLEHSIVLLPFNKNIEEEYLKASIYVMASYFESFGMVLIESANYSIPS
                     ISFDVKTGPKEIIDNKRSGFLIEDGNLQEFANKLQILMQDEDLRKKFGKNAKEKVRKE
                     FSKEVIMKKWIKLINS"
     gene            complement(18720..>19879)
                     /locus_tag="ACJE1S_000997"
     CDS             complement(18720..>19879)
                     /locus_tag="ACJE1S_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HGG0806557.1"
                     /translation="YTAVLITSIIKNTNANNDFLNNIYHFHILSDFLSDSIKEKLDKL
                     QNGLSKIYPCKISIHIMKDDEFKNFPSSGAAHSLKLPYYRLKFISLFDDSIDKCLYLD
                     SDMLCMCDIRELFCIDLKDNIIAVVGDPGSKKAKIKFIENGKKRVLKFDENYFNSGFL
                     LINVKEYKKAFIEQKCEELAKNCVYIKAADQDLLNATISKDKILKLDFAYNFNIITLL
                     YTVCKDEKKNRLNYTRKEFIQSMKNPKILHYGEKPWRFLHSYKDFYGKNINDYWWDIA
                     EVTPVFKEELSKQKKEIKDYLLYAGLGYTLYYFCKKYQIFSIKKLLKTDKDKELMEFA
                     KDLNDEKYGLYCMLGEMVLYARKHQKGVINIILKSYKMIKMYEKYAHKSKF"
BASE COUNT         7191 a         3508 c         2498 g         6682 t
ORIGIN      
        1 ccatctttat tatgattaaa ttcaggaact atttctttta aaatttcagc tatattttgg
       61 caatcttgca attttttaat ataatcattt aaaatttgaa tatccatctt ttcattttta
      121 gcaacaaaaa tactctcata ttctgtcttt gcatcattct catcgattag caattcttca
      181 aaaagctttt ctccacgtct taaacctgtg atttttatct ctaagtcttc tcggttggat
      241 agaataagca tttttttagc caagtccata atcttaaccg gctcgcccat atccagcaca
      301 aaaagctcac ccccttttgc gatagctcca gcttgcaaaa caagctgcac tgcttcactt
      361 actagcataa aataacgcac tatatcaggg tgagttaagg ttaatggctc attatttgca
      421 atttgagctt taaatttagg tatcacactt ccacttgatc ctaaaacatt tccaaagcgc
      481 acacaagaaa cttcaaaatt ttcatcactc gaatttaagg tataaagctc acatactctt
      541 ttagtgcatc ccatgatatt tgttggacgt accgccttat ctgtacttat cataacaaat
      601 ttttttactt tatttttttt agctacatcg catagagttt tagtacctac gatattatta
      661 agcacagcag aatgcggatt ttgctcacaa agaggcacat gcttataagc agctgcatgc
      721 aagatcaatt caggcttata ctccttaata atctcatcta aactttgctc gtctaaaata
      781 ctaagcaaaa caggggtaat tttttcttta tataagctta aatcttcatt aatcttataa
      841 agattaaatt cgctatgatc aagcattata agatgttttg caccaaattt aatacactgc
      901 ttacaaagct cacttcctat agttccgcct gcgccactta ccaaaactac tttatctttt
      961 aaaaatgaag ccacagcact atcatctaaa tctttaggtt ttctagcaag caaatcttct
     1021 atgctgatat ctcttgcttc atttcttgta aaagaaaaaa tcttaacatc actgattcca
     1081 taagcaataa gctcttcaaa caaagcttta agctcagctt gatctagttt taaagctata
     1141 atagcagttt taacaccttc attgacataa tctttaattt tacttttatc ttcaacgata
     1201 aatttatcgc aatatgttcc tataagctct cttctagcat ctacaacacc cacaggaaaa
     1261 agacccaaag agccttcctt tgctcccttt agcaaatgca aagcctttga agtagcaccc
     1321 accactatac aaggagtttc ttcttctttt gcgcgggaag gcttaaagtc tataagcatt
     1381 cttttagaaa ttcttaaagt gcctacaaac atataagaaa gaataagatc aatacctata
     1441 accgaacgcg ggaaaggatt gaaaaaatca tcgtaaaaat aaaaaatcaa caaaaaacaa
     1501 atttcagcca aaaccaaagc aaaaaatatc tttcttgctt cacttaagga aaaaaaccgc
     1561 catgccacct tataaattct aaaaataaat aaaaaagcta tttttaaaac cagtaaaata
     1621 agtcccgctt taatcatacc ctcataaaaa atactaggaa tttccccgct aaaacgcaaa
     1681 gaaaaagcta aaaatataga gagtataaac aaaaatgcat caaaacataa gaaaaaaatc
     1741 agccttttgc ttttataaaa atccatcatc aagcctttac gctcttgata ataagttctg
     1801 aaatttcacg cacattgtct ttactcatcg ctgtgccact tggcaagcat atcccttttt
     1861 taaagaataa ctcactattg ccatttacat aagccttggc acctttgaaa acctcttgag
     1921 tatgcatagc tttccaaagt gggcgtgttt caatttgctc tttttgcaaa tctgttataa
     1981 gttttgaaat ttttggatgc aaaatcaagt ctttttgcga aatttctata catttttgat
     2041 aagcattcat ttcgttttta tcaaaatcaa tcaaagccgt gcttaaccag cgattgcttc
     2101 ttgaattttc aagctcatct aaaaagacaa aactatcacc taaaaattct ttataccact
     2161 cataaatttc tctttttttt agcactcttt gttctaaaac ttccatttgc gccacgccaa
     2221 tagcgcctaa aacattactc aagcggtaat tataaccata atctaaatgt tcataatgca
     2281 aacaattttc ccttgcctga gtgctgtaaa atctcgctct ttcgattttt tgcttatctt
     2341 tacctataag cataccaccg cctgaagtgg tgatgatttt atttccatta taagaataag
     2401 ctccaaattc tccaaaagtt cctaaagccc tacccttgta aaaacttccc aaagcctcgg
     2461 cggcatcttc gattaaaata atattttctt tttcgcaaat ttggacgatc tcatccattt
     2521 tggccgcatt gccataaaga tgagttaaaa ttaaggcttt tggttttttt tcgctctctt
     2581 taatagcaag ctttaacaga tcaatatcta tattaaaagt ctcatcacaa tcaataaaaa
     2641 caggttttgc cttaagatag caaataggag ccactgaagc aataaaagta aaagatgaag
     2701 ctaaaacaat atcatcttgc tccactcctg ctactcttaa agccaagtgc aaagcggccg
     2761 tagctgaatt tagcgccaaa gcattttcgc attgagcgta atctttaaca ctttcttcaa
     2821 aacgatttac aaattcgccc aaaggagcta tataattgct tttaaatact tcttctatat
     2881 attttaactc attgccaccc atgtgcggag gagaaagaaa aaacctcatt ttttatcctt
     2941 tattataaac agtgatttta ctaagatgat gtattttatc taaaataatt tactaagtat
     3001 caaacattaa aaattctttt gcaatcaaag cttattttta ttatatctta agattaaaag
     3061 taatttttta aggattaaaa tatctacatt ctttttgcag gcactcccac aaaaacaccc
     3121 ttttcgcttt gacttttcac taaagtcgcc ccacccccta aaatgctatc atctgccaaa
     3181 cttaaatttg gcaaaacaca agaattaatc cctaaaaaac aatttttgcc aattttgaca
     3241 tttcctgcac acttagcccc aacgcttata tgggaaaact cacccacctc acattcatgc
     3301 tctatcacgc ttgaagtatt taaaatcacg ccttttttga tttttgcttt tgcatttact
     3361 accacataag gcattattaa aattccagca tcttctgcta tatccgcact ttggctaata
     3421 atcgcacttt tgtggataag atttacgatc ttaaagccac tgtctgaaat ttggttaaaa
     3481 agcttttttc ttatttcatt atttccaata gctatgaaaa tatcatattt tggcaaagag
     3541 ctttcaaatt ttttaccctt aaaatcatct aaaaaaatac attctttata gcccaaattc
     3601 gtagcgacat cagcacaaac aagcccatgt ccgctcgcac cataaatgta aattttttca
     3661 gttcttgcca ttaaatttct ccgttgtaac atgaccttct ttgcttactc cgcttctttt
     3721 taaaaccttt aaggctgtta agaacatgat ttttaaatct agtagaaaag aaatattttt
     3781 tacataatac acatcaagtt caaatttttt ttgccaagaa atcgcatttc taccatttac
     3841 ctgtgcccat cctgtgatac caggacgcac tttatggcgg agtttttgct cttcattgta
     3901 aaggggtaag tattctacta aaagaggtct tggacccaca aaactcatat caccctttaa
     3961 tacattaaaa agctgtaaaa gctcatctaa gcttaaactt ctaacaatct tcccaaaagc
     4021 cttcaaacgc aactcatcac ttaagagctc gcccttttca tctctttcat cactcatggt
     4081 tttaaattta taaattttaa aaattttttc atttaaacct ggacgatttt gagtaaaaat
     4141 cacactacct tgagttattt ttaaaagcaa agcagtgatt aaaataagag gcgaaaaaag
     4201 caccaaaaga aacaaagcca aaacaaaatc aaaaattctt tttatccatt tctcatacat
     4261 ttttaatcac cctatcataa agttctaaat aacgctgcgc gataacattt tcatcgtatt
     4321 gtaaagcatc cttagctgca tttttaccta gattgattct taaactttca tcttctaata
     4381 aaacttgtat tttttctatt aaatctttac tatctttggt cttagcccaa agcccatcat
     4441 aagcatttga aattgcctca acacaaccct cacaatcact tactacaata actttgccac
     4501 aagctttcgc ctctaaaaca cttactggaa atccttcttt atagcttggc aaaacaaaga
     4561 tatcgcaatt ttgcaaaagt tctactatat cacttctagc acccaaataa aaaaccttgc
     4621 ctgaatttaa aaattccaaa ctcgcacaag aaggattatc atctcttccg cccactaaaa
     4681 caaaatttgc cctatctttt aaatactctg cactttcata aaattctttt acgcctttat
     4741 gccacaaagc cctagctatc atcaaaacaa taggcttttc atcaattttt aaattttgcc
     4801 aaaaagcttt tttagcttct tgctccactc tcataggaaa gaatttttta agattgatac
     4861 ccacggattt aatcacgcaa attttatttt ccttaagtcc taaatttcgc ataaaatccg
     4921 cattagcttg atttacaaag atgaaagaat cagcgatttt aaaactaagt ttataaagag
     4981 tattgataac aaaacgcact aaatttgctt taaaaccctt gtctatataa aaagatccaa
     5041 gtccctcaac aagaccgatt ttataaggaa ttttggcata ttttgcagct attaaaccaa
     5101 aggtattgct cttatgagct ccactttgca aaagatccaa atttaagttt tttaaaacat
     5161 ttttaagatg taaaaaattt ttaaaaacaa ttaaaggatt taaactcgct cttgaaagct
     5221 cataaacaac gatatttaaa tttaaagcct ttaatttttc agtatattca tcttgtggca
     5281 ctatgacaaa aacctcatct cctcttgcaa tcaaagcttt aattataggc aatctaaaat
     5341 gatatatact tgctcctgcg tgagttaaaa agcctactct cattgtaaaa acctttaaat
     5401 tttgagttta aaaacttttg catctctagc attaatcact aaatcataca aatttttatc
     5461 ataatttcca aggaaaaaca tttgcacata agcactatta aacatagttt tatccattaa
     5521 aataaactga gcataaggta tggtgctatc tttaagataa aaaatataaa attgagccat
     5581 atcatcaata ggagtgattt tatattcacc ttgtttgata gaattaatct ctatgatact
     5641 atttacggat atagtactat tatttatttt aaaacttcta aaatcatcac ttaatgcaat
     5701 accattgcta agataaattt ctccattttt aacatcaagt ggataagctg cactaaaagt
     5761 aaaaggttta tttatctcac ctgtctccaa atccacaaaa gaaaaactag ccacagttga
     5821 aaaaatcaaa gacattctag ctggcatata gatatacaca tcgcgtgttt ttggcatatt
     5881 gattttaaaa tcaggcttgg aaagcgaagc taaaaacaaa tccacattat tttgattata
     5941 atctttcatc atggcttgta aaagatcatt ttttaaaata tcatttaaag gggcgtaaaa
     6001 acttttttct gtgtattcta cactaagtct tgccatattt gcagcagcca cttgatcttt
     6061 acttagaaca aaagatggga aaaaattatc cttgcctaaa tgcttacccc catcagccaa
     6121 agttttaaca tcgctgtaat acctaatagg atatccataa tcccaccaag ttactacata
     6181 atcttctctt tgtgcaattt ttttaagctc atctaatttc gtagcctcat tttgagaaaa
     6241 aacagttggt gctttataat tgttgatatg atagaacata ggaattaaac ttaaaaaagt
     6301 aaaaataaaa acgcctatat tggcccacca ataggtatta ttgttttttt gttttctttc
     6361 ttgcaaaaga ctcattaaaa aaccaaatcc aagtgctaaa acaggtactg cataaatagt
     6421 aaaacgaagt ccactcttaa gtgctaaaaa tcctaaagct aacatcggca aagccaaaat
     6481 catactttta tgttttctaa caaggaaaat aaagccgatt aaagatacaa aaaatacaag
     6541 ctcgcttccg ctaatccttt gcataaaaat acttaaatct atactttcta cctcttgtat
     6601 ggtttgattt acattaaaat acataaaacc ttgagccaaa tttgcactct catcacttct
     6661 aaaaatataa aatttaagtt gatagagtat aggatcaact ccaccgctta gtatcaaaaa
     6721 taccaaagtt gccaaaccta aaattccaag caaagcaaag ctaaaacgct tattttgcaa
     6781 aacaaaaaga ctaaaaagta tgacaatgat ggcgctttga taaaaccaag ctatatttga
     6841 aagtgtgata gaagctagga taatagccat ataaagcgtt ttttctttta tatgaaaaac
     6901 caaggtataa ataaagaaaa gtcctagtaa agcaacattt aaagtatagc ttgatggata
     6961 ccaccaaaga taaattccta caaacaaagg cagtgttatt aaagataata aatctttttt
     7021 caaaatcagc cttatcataa agaaaactat catcattgca agaactataa caagcatatc
     7081 agtatcataa tatccgctca tcgtgcgatt ataatagcta ttagctatac tggctagcaa
     7141 tgctgcaaca aaccccatta aagggcgttt gtattcatta gcaatcaaaa tcaaaggtat
     7201 aaccaccaaa gaagataaaa aagtactgat atatataaaa atgctttcta aagaaaaagg
     7261 agttatttta taaaaccaat atgtgagcgt tgaaagcgaa gaaccataat aactcaaatc
     7321 attaggttga tgaaaacccg ctatcatatc tcttgcaccc tctgcaaaag catatccatc
     7381 atttgagata atcataagct cgttattgaa aaaatattca ttaaactcac ttgcccaaaa
     7441 aatccaataa aacctacata aaacactaaa gacatacgct aaaattataa aagccaataa
     7501 aataaaagtt gggtttttaa agtattcttt ttttaacata tcttatccta ataaatattt
     7561 taaagcattg cgtgcgattt ttgctttatc aaaatcaaga gccctatcct tggccttttt
     7621 cttataagct tttcttaaat tttcatcctc gagcattgtt tttaagccca taaacataga
     7681 attttcatta tttacttcta ctaaaagtcc aaattcatca tctccaaaaa gctctcttgc
     7741 accacttcta tgatcagtgc aaaccaccgc acagccacaa gctagacttt cgattaaaac
     7801 atttgaaaaa ccctcaaaca cagaagcaaa agcaaaaaat tcacacttag acatatattt
     7861 gtaaggatta ttatcaaagc ccaaaagcaa aactttatct tctaaattca agtctttaat
     7921 caaagccaaa agctcatctt ttagcactcc ctcgcctaaa atcacaagct ttaaatctgt
     7981 ttttaatctc gcataagcac ggataagcaa ggcatgattt ttaccctcat caagccttcc
     8041 cacgcttaaa ataaatttat cctttaagct tatatcttca agtgcttttt gttctatttt
     8101 ttccaaatct atagcattgt ataaaatttc acattttgct ttgtcaattt taaaattaca
     8161 caataaatct tctaaatttc ccttagaatt aggcaaaatc aaatcagccc ttgggtaaag
     8221 caaagtaatc aaaagtttat tggctaaaga attgaaattg tttttagcat acatcacgct
     8281 tggagtggta cattcgttga ttacaaggcg agttttgttg ccaaatattt ttgccatcaa
     8341 tgcaatataa ttaggcctat ttaaaaaaac aaattctgta tcgatattta atttttggca
     8401 aagtttttta tattttaaag ctaaaaaagg aagttttaaa aattttaaaa taggattttc
     8461 actaggtttt gaacgctcta aaaaatggat tttgcattca gaaatttcat aagaaatttt
     8521 atcattcatt aaaatcaaat gcacttcaaa tttcaaactt aaaatcggaa gtaaagttgc
     8581 cactactctt tcagcacccc cacttcctaa agaataaata aaaatcgcta atttttgcat
     8641 aaagccaccc gaatttttga tagtttttca atcattttac ttggaattat acttaaagta
     8701 agtaatatca aagcaggagc attgatttta atgctcaaac ttttaaacaa acaatgataa
     8761 agtgctttat aatttgcact taattttgca taatacgctg ccattttata ataactcgca
     8821 caagtttttc tataatcatc atccccagaa gcttttaact cattttctaa aattttcgca
     8881 agctctaaat accccaaatg caccctatga gcatttttac tcgctcctag cgtgacacta
     8941 tcttttctaa aaacacgata aattctaaaa gctttatgga tataaaaact tttttcttcg
     9001 tataaattca cccaaagcgt agcttcgttg ccataaaatt cctcgttaaa acgcttattt
     9061 ttaagcaaag aagccttaaa aacagaaaaa aattccccac taaaacgctg cattaaaaaa
     9121 tctttcttag aaatttcatc ctctttttgc aaacctttac cgctaaactc atcacttaaa
     9181 attccttctt tttctataag gcaatttcca aaaacatgag aataaccctc atctactttt
     9241 tgcattaaaa cacccaaagc atagggtaaa agctcatcat catcatctaa aaaggttata
     9301 aattcaccac ttgctttatc caagccattg tttttattgc cattagggcc ttgtttgtag
     9361 ttttgattta aaaaatactt aatgcgttta tcactttttt gcaaattctc tacaacgctt
     9421 ttagtatcat cactagaatt atcatcgctt ataatgattt ctaagtcttt aaagtcttga
     9481 tttaagatac tctgaactgc cttttgaagt aatgaagaac gattaaaagt aggaactata
     9541 acagaaagtt taggcatttt taacctcatc aataagctca agccattgct ttttaatata
     9601 agaaatttca aaatcttcac atcttttttt agcatttata acgatatttt ttcttagttg
     9661 ctcatctttt aatacaagct caagctttct agccaaagct atttcatcat cacaaccgac
     9721 taaaaatcca tccttattat cgttaattaa gtccttagct ccattataat aagaagttga
     9781 aattctacac acttcaaaat acaaactctc gatcaaaacc gttggcaaac cctcaacaaa
     9841 agaacaaaga caaagtactt tagccttttc atagagcgct tttacatttt caacacgccc
     9901 taaaaacttc actcttatgc ctaaagattt tgccttatat tcaagctctt gtcttaattc
     9961 cccatcacca gccacaacaa attcataatc ctcttgcaat tttttatcta aatgcactat
    10021 ggcttttaaa aacatttgag ggtttttatt ttgatctaaa cgacctataa aaagcaccaa
    10081 attttctttt tcaaaatgct catttaaaga aatttctgtg ctaaaatgac aaggattagg
    10141 caaaagtttt acccttttta caaatttttc ataataaatt ttatcactac ttccaagcac
    10201 ggtcaaagca tcgcaaaaag gataactcaa gcgtcttaaa aaacgccaaa ttttagattt
    10261 taaataagct tcattactat gttcgcttat gattaatggg gtttttaatc ctatcttagc
    10321 aaaaatacaa gcaatatttg tcgtatctaa aaaagagata aaaacatcgc tttcattttc
    10381 ttttaaagct tttcttaatg ccagatattt tttaaaacgg cttgcgattt tatgatataa
    10441 agtgtcaaat ctaaattgct ctaaagttat aagtttgata ttttcttcaa gtttataaaa
    10501 agaatcgccc acatgaaatt tgatgatact tacttcatgc tgagtgcaaa gcgcatttgc
    10561 taaagtcgct aaaacacgct cagcacctcc tgaatttaaa gtggctatga taaaagttat
    10621 tttcactttt tatcctcctt aaaaagtttg ccatgttcta aacgatagat gctatcacaa
    10681 cgcgtgatgg ttgaaagacg gtgcgcaata ataatcatgg ttttgtcttt agaaatctta
    10741 taaatttcat ccataatcct tgcttcgctt tcagtatcaa gcgcagaagt agcctcatca
    10801 agaactagaa tttcaggatc taggtacaaa gctcttgcga tggctatgcg ttgcttttgt
    10861 ccaccgctta aattactccc accatcgcct acttttgttt gcactccttg gggtaaattt
    10921 ttcacaaaat gttctaaatt agcttgctta atcacccttt gaagtttttc ttcatctact
    10981 tcatctccaa agctgatatt tttagcaatg ctgtcattaa aaagatagat attttgcggg
    11041 atataaccta ttttttggcg ataattctta acatttttca tatttaattc atttttatct
    11101 acaagcaccc taccctctct aggacttaaa agtcctatga ttatatccac taaagtgctt
    11161 tttccacaac cactttctcc tataaatgcg atcttttcgc ctttttttat acttaaattt
    11221 aaacaagtaa ataaattctt tttgtcttta tatccaaaac ttaaattttc tagtcttaat
    11281 tctttatcaa aatcaatttt ttcttcaccc aaactctctt ctttttgctt taaaatttga
    11341 taaataatat ctaaagaaga gcgataataa agtaaatcat gatagcttgt aatgatacga
    11401 tttgcacttg gcatcaagcg ataaagcgct aaaacaaaaa tggaaatagt cgctaaaatt
    11461 ccggatatat cgctttgatt tttaaatact aaaaaaacca ctataaaaac aagtacacaa
    11521 aagccaaccc cttcaagata aattcttggc atggcactta cgctttcatt ggtgatattt
    11581 gccttagcaa aaatctcgct ttgagtttta aaaagattta aaacgccatc ttctttggtt
    11641 ttgagcttta ttaatttaaa attatttaaa tttgtattaa gaatttcaaa aaaattcttc
    11701 atcgcttctt cgcgtttaag acctgctttt ttaacgatag gactaagaac tttgatcaag
    11761 ataaaagcat ttataatcat aaaaagactt aaaaataaag tgattttata atttactaaa
    11821 agcatgagag tgtaaagtaa aagcacgaca aaaatttcac tcatcatcag caaaaatgat
    11881 gaaatcatag tgcttagatt gtaaacttct ccggtaatag actttagaat ttcggattga
    11941 tttttttgag taaaattttc ataatctgta tttaaaaatt ttgcaaaaac tttataagcg
    12001 atagtatgat acctaccctt tgaaaagcgg gctaagaggt gaaaataata actatttaac
    12061 aaagcgcgca aaacataaaa gacaataagc acaacaccaa aataaactat aatctcaaaa
    12121 acaggtaaag caagatagtc tttaagctgg attaaatact tatttctatc aaaataagaa
    12181 aaatcactag ccaaagtaat aaaaggcatc actaaagaaa tagcaaaact ttctataaaa
    12241 gaaataaaaa ccgaaaaaag cagtaaagag aataaaaatt ttttatcctc tttactcaaa
    12301 ataaaaaata ttttttttag cactgctttt cccaatcaaa tgcagatttg caaataagat
    12361 ccaaatcatc aaatttaggc tgccaagaag taagatttct aatcttgctt gcatcagaaa
    12421 tcaaaactga aggatcacct gcacggcgtg gggcaagctc gactttaaaa tccactccac
    12481 ttactctttt catcgcatca ataacctctt ttacactaaa accatgacca tagcccacat
    12541 taaaaatatt gctttcatta ttttctagat aatccaatgc cgccaaatga gcacttgaaa
    12601 tatcatctac atggataaaa tctcttatac aagtgccatc ttttgtatca taatcatcac
    12661 caaatataaa aagcttatcg cgttttcctg ctgcgcattc tgctgctact ttgataagca
    12721 aagtcgcttt aggatagcgc tgtcctaatt tataatccat acaagcacct gcaacattaa
    12781 aatatcttaa aatacagtat ttaaattcag gatgagccat atttgcatca cgcaaaacct
    12841 cttcactcat aagcttgctg cgtccataag gattgatagg tgctaaagga ctattctcgc
    12901 ttacaacagg ggttgtaggt tcgccataag tagctgctgt agaagaaaag ataaatttac
    12961 ccacccctgt ttggatacaa gtttggatta aattggttgt attaatcgtg ttattcatat
    13021 agtattttaa aggattttgc atgctttcaa acacttcaat actcgctgca aaatgcacca
    13081 ctgcatcaaa tttttccctt tcaaaaagtg cttttacgcc ttcaaaatca cttaaatctt
    13141 gctcaaaaaa tttaaattct cttatatttt gcaaatcatc aatagcaatt ttagaaccct
    13201 tagaaagatt atctaaaacg caaatttcat gatttgtttt taaaaactgc cttaaagtat
    13261 gagagccgat gtaacctgca ccaccactaa taagaatttt cattttttac ctcgatgatt
    13321 taaaattaaa aatcaatttt aatatattta ttttaacgat taaattttca tcttagaaat
    13381 ttcattttca caagctttac aaaaaatttc cacataggca cgatttgctt tttttgcttt
    13441 taaaaattca ctcatagaat ttaaaaaata agcataatcc tcatcgctta cattaccctt
    13501 gatcaattcg tattttaaaa aaagcatata ggtgtttaaa acatcacttt cgcaatactc
    13561 gtgaattttt tcaatcttat cttcataata aagcttcatc acctcatcgc catgcacatc
    13621 gtatttacct ggtaaatctg ccatagcaca aatcgtatca agctttaaac cccttgtcga
    13681 accaaaactt tcaaacaaat cacaatgttt taattctgaa aatctagttt tataattatt
    13741 ccacttatca ctttgtgtat caagataatt agccgctttg atattgtatt ttaaagccct
    13801 taaaacaagt aaaggcatat cataattttt accattaaaa ctgactaatt tcggctcgta
    13861 tttttcaatg aaagcaaaaa aattatggat catttctttt tcattttctc catcgatttt
    13921 atttactttt ataaattttc cataatgatc gctaataact gcgcaaatgc ttacgatctt
    13981 atgataaggc aagggtaaaa actcacttcc gctttgctct ttttgccact ctagcgcttt
    14041 taagcttact tctaaatctt ctccttcaaa agccaaagtt ttgtgaatta aatccgtatc
    14101 tgggatgctt tcacaatcaa aaatgcaaat ataaccttca tttttcatca tttttaacct
    14161 tttttcaaat aattttgcta aaatcatagc aaaaatttaa aaattttagg ttttaatgaa
    14221 aatagcaatc attcgtttat cagcccttgg ggatattatc caaagtgctg tggttttaca
    14281 atttatcaaa aaatttaaaa aagatataga aattcattgg tttgtggatg aaaaatttga
    14341 aggcatactc aaaaatcatc ccctaatcga taaactttat gctttgcctc taaaggacaa
    14401 aaaaatcatt caaagtttaa aaatactttt agaggctaga aaaaataatt ataatgcggt
    14461 tatggatctt caagggcttg taaaatcggc tattgtgagt agaattttaa gtagaaataa
    14521 ttttggtttt gataaaaaca gccttaaaga aagctttgcg cataattttt acaaccaaaa
    14581 attaaacata gattataatg aaaatgtttt tgtaagatat ctgggtctaa cttctttcat
    14641 gctgaataag tattttgatc ctaaagatct agcttttaaa gaagatgttt ttagtgtgga
    14701 tgaaaaatta aaacaactct taagcgaaaa aatgcaactt acaaaaaata aaaaaaacat
    14761 actcatccat gtgggatcaa gtgaagaaaa taaaatctat cctaaaacca agcttgcact
    14821 actttgcaaa ctcatcatca aagaatttcc tgaaataaaa attttcttag gctggggcaa
    14881 tcttaaagaa tatgaatttg ctaaagaagt catagagcta ggcgctataa gtcaagacaa
    14941 tatagaaata gctcctaaat ttagtcttga agaattgata gtttttacaa aatccatgga
    15001 tttaatcata ggaaatgata gcggcccaac gcatctagct tttgctttaa ataggccttc
    15061 tataaccatc tttggtgcaa cgccaagcta ccgcaatgct tttaaaacca atatcaataa
    15121 aattatcgat acaggtaaaa aaatcacaaa tgcaaaacat cttgataaaa gcgacttttg
    15181 tataagtact atcgaagaag aggatatctt aaaacttgtc aaggaacttt tcggagatga
    15241 ataaagatta tctttacctt agtgcttatt atatacttaa atttttagtc tatactatgc
    15301 ctcattttat tttaaatttc cttgcttttt gtgtttcaaa gatcgttttt aaactcgata
    15361 aaaaacatag aaaaatcata gatataaatt taaaactttg ctttccctat aaagatgaaa
    15421 atgaaagaaa agaacttgct tttaaaattt ataataattt tgccaaattt ggattagatt
    15481 gcattaaaaa ccaaaacaca agtaaagaaa aaattttagc taaagtcgtc tttgacaatg
    15541 aagaaatttt aacccaagcc ttaaaggagc aaaaaggggt gattttcgct actgctcatt
    15601 atggaaattg ggagctttta agtcttgctt atgctgctaa atttggagcg atttccatag
    15661 tgggtaaaca actcaaaagt caaagaatga ccgaactttt agctaaaaat cgcactcaat
    15721 ttgacataga acttatcgat aaaaaaggtg gacttagaaa aatgttaagt gctattaaaa
    15781 acaagcgtgc acttggcata cttacagatc aaaattgcac cgataatgaa ggggttaggc
    15841 ttgatttttt tggtaaaaga gtaaattatc aagcaggagc tagcatctta gccaaaaaaa
    15901 caggggcttt gatcatacct gcttatattt atcaaggaga ggatgaaaaa tttcacatta
    15961 aatttttcaa aacccttgat cctttaaact ctagcctaga agaacttaca aaataccaag
    16021 caaaaacttg tgaagaaatg atccaattta agcctgatga gtattttttc tttcatcgtc
    16081 gttttgcaag ctatgatgaa aaactttaca aagatatcaa atgaatcttg aaaaaataag
    16141 cgttatcatc atagttaaaa atgctcaaaa taccctcttt gaatgtttaa attctttaaa
    16201 agaatttgga gaaatcatac ttttaaacaa tgaaagcacc gatgatacct taaaaattgc
    16261 caaagaattt caaaaagatt ttacgcattt atacatttac gaaagcaaat ttataggctt
    16321 tggagcttta aaaaatcttg ctttaagcca tgctaaaaat gaatggattt taaacataga
    16381 tgcggatgag attttagaaa acgaagccaa agaagaatta aaaaaacttg aatttaaaga
    16441 gcaaaatatc ctagctttaa cgcgcaaaaa cctttacaaa ggagaatgga taaaagcttg
    16501 tggctggtgg cctgatcgtg ttttaagagt gtttaataaa aaacatacaa aatttaatga
    16561 aaatttagtc catgaaagct taatcttaca tccaaatact caaaaggttt atcttaaaaa
    16621 tggactaaag cattttgctt ttgaaagtat tgatgacttg cttgacaaac ttcaaaaata
    16681 ctccaagctt tgggctttgc aaaatttaca caaagaaagt ggaatttgca aggctttggt
    16741 gcgtgggttt tggacttttt ttagaaatta tgttttaaaa aaaggaattt tttacggata
    16801 taaaggcttt atcataagtg tatgtaatgg tttaggagct ttttttaaat atatgaaact
    16861 atatgagcta aaaaagcaaa aaccaaaaac ttgtgcccta atcatcacaa cttataatca
    16921 acccaaacgc cttgctttag tactcgatag tgtaaaaaat ttagatcctt tgcctaatga
    16981 ggttttaata gcagatgatg gaagtaaaga agatacagca aaacttatac aagaatatca
    17041 aaaaaatttt ccttgtgtat taaaacatat ttggcaagaa gatgaagggt ttagacttag
    17101 caaaagtcgc aatgaagcaa ttaaaaattc cttaagtgaa tacattgtag ttattgatgg
    17161 tgatatgatt ttggaaaaag atttcataaa agaacattta gaatttgcac aaagaagact
    17221 ttttttacaa ggttcaagag taattttaaa taaaaaagaa agcgaagaaa ttttaaacaa
    17281 agatgattat cgcatagctt ttaataaaaa agattttaaa agttctaaga attctttttt
    17341 ggctaaaatg ctttacagtc tttcaaaaaa agatgaaaaa atctttaaaa aaatcactct
    17401 tattaaaggt attaggggtt gtaatatgag tttttttaaa actgattttg atgagcttga
    17461 tggttttaat gaaaatttta ttggttgggg tagagaagat agtgaatttg tagctagatt
    17521 tttatttaat aaaggcattt ttagacgctt aaaatttaaa gctattgctt atcatattta
    17581 tcacaaagaa aatagcaaaa aaatgcttga aagcaatcat caaatttatt tagatactat
    17641 taaaaacaaa aagatttctt ggaagaacat atgaaaatag ttttactcat tggcgatatt
    17701 actataggag gtggtgctga aagagttgtt tgcaatcttg caaatgcctt taatgaatta
    17761 ggttatagtg tagaaatttt aagtttttat aagagtaaag aaaatttagc ttatgaagtg
    17821 cataaaaata tacaaataag cttctttcac ataatctcaa gaagtaaagt ctttaaaaaa
    17881 cctttttata agctctacta taaatactat gaaagctata ttttaaagca aaaatacaaa
    17941 tatgcggata ttatgattta caataactgt tctcaatttc ccttttttaa aaataaaaat
    18001 actaagcata taaaactcat tcatgagatt tttaaacgct accaattaag aaataatttt
    18061 tttgacaact taataatttt atcattacac gaactatcaa tttggaaaca ataccacaac
    18121 aatgtttctt atatacctaa ttttacacca acaatcacaa ataaaactcc cactcttaat
    18181 caaaaaataa ttttaagtat aggtcgaata accaaagaag accaaaaagg ttttctaaga
    18241 ctcgttgata tttgggaaat agtgcaaaaa aatcaaagtt tcaaagaatg gaagcttcat
    18301 attgttggag atggtgctct aaaagaagaa ttattttgca aaatcaaaac aaaaaaattg
    18361 gaacactcta ttgttttatt accttttaat aaaaatatag aagaagaata cttgaaagca
    18421 agtatttatg ttatggccag ttattttgaa agttttggta tggtgctaat agaaagtgca
    18481 aattattcta ttcctagtat ttcatttgat gtaaaaacag gacccaaaga aattatagat
    18541 aataaaagaa gtggcttttt gatagaagat ggaaatttgc aagaatttgc aaataaactt
    18601 caaattttaa tgcaggatga agatttgaga aaaaaatttg gtaaaaatgc caaagaaaaa
    18661 gtgcgaaaag aatttagcaa agaagtaatt atgaaaaaat ggataaaact tatcaattct
    18721 taaaattttg atttgtgggc gtatttctca tacattttaa tcattttata tgattttaaa
    18781 ataatattaa ttacgccttt ttgatgcttt ctagcataca aaaccatttc tccaagcata
    18841 caataaagcc catatttttc atcatttaaa tcttttgcga actccattaa ctctttatcc
    18901 ttatctgttt taagaagttt ttttatacta aatatttgat attttttaca aaaataatat
    18961 aaggtataac caagtcctgc ataaagtaaa taatctttta tttctttttt ttgttttgat
    19021 aattcttctt taaaaacagg tgttacctct gctatatccc accaataatc attaatattt
    19081 tttccataaa aatctttata agaatgtaaa aatctccacg gcttttcacc atagtgcaat
    19141 atttttggat ttttcatact ttgaataaat tcttttcttg tataatttaa tctatttttc
    19201 ttttcatctt tgcatacagt atataaaagt gtgataatat taaagttata agcaaaatca
    19261 agttttaaaa ttttatcctt ggaaatagtt gcatttaata aatcctgatc agctgcttta
    19321 atataaacgc aatttttagc taattcttca cacttttgct caataaaagc ttttttatat
    19381 tctttaacat taattaacaa aaatcctgag ttaaaataat tttcatcaaa ttttaaaact
    19441 ctttttttac cattttctat aaatttaatt tttgctttct tgcttcctgg atcacctact
    19501 actgctataa tattatcttt taaatctatg caaaacagtt ctctaatatc acacatacaa
    19561 agcatatcag aatccaaata caaacactta tcaatgctat catcaaacaa agaaataaat
    19621 ttcaatctat aataaggaag ttttaaacta tgtgcagcac ctgaacttgg aaaattttta
    19681 aattcatcat ctttcataat gtgaattgat attttacaag gataaatctt acttagccca
    19741 ttttgtaatt tatctaattt ttcttttatg ctatcactta aaaaatcgct taatatatga
    19801 aaatgataaa tattatttaa aaagtcgtta ttagcattag tatttttaat aatgctagta
    19861 attaatactg cagtatatt
//
LOCUS       DBBXOW010000030        19243 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.031, whole genome shotgun sequence.
ACCESSION   DBBXOW010000030 DBBXOW010000000
VERSION     DBBXOW010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19243
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.031"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            13..864
                     /locus_tag="ACJE1S_000998"
     CDS             13..864
                     /locus_tag="ACJE1S_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HGG0806558.1"
                     /translation="MQKLLKVALIQFAPKSYEVQNNLDKALKLAHLALEQGARLIVLP
                     ELYDSAYCVEDQDEKFSLNLHQAHPNLDALQKLAKNYQAYIVACSIEKDTQLYDSAYI
                     ISHKGLLGVYRKIYLWGNEKERFARGDKYPIFELEFENFKLKLGLQICYEIGFSEGSR
                     FLALQGAEIICFPSAFGKARTYVWDLASRSRALENGVFVLAANRSGSEISKINNETLT
                     FAGKSKIINPKGEIIKEILEEEGFIIAELDLKEVQIQRKNLPYLKDLNLKLNQEILTN
                     IHLNTKE"
     gene            867..1748
                     /locus_tag="ACJE1S_000999"
     CDS             867..1748
                     /locus_tag="ACJE1S_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HGG0806559.1"
                     /translation="MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIP
                     RLLKLFKKYNIPATWFAPGHSIETFPEQMKMIVDAGHEIGAHGYSHENPIAMSAKQEE
                     DVLLKSIELIEKISGKKPSGYVAPWWEFSNITNELLLKHGIKYDHSLMHNDFTPYYVR
                     VGDKWTKIDYSKDAKEWMKPLVRGQETDLIEIPANWYLDDLPPMMFIKKSPNSFGFVS
                     PRDIGQMWIDQFDWVYREMDYAIFPMTIHPDVSARPQVLLMHERIIEHINKHEGVKWV
                     NLNDMADDFSKRFPRKK"
     gene            1790..2125
                     /locus_tag="ACJE1S_001000"
     CDS             1790..2125
                     /locus_tag="ACJE1S_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806560.1"
                     /translation="MCILCGEMISTLHWSELNFKEEKHELSVGEEQKERLRIRLKKVK
                     ILNEILEFYGLKLKEWQNSKYILSNKKGRDIIVNDLGDLWIKASELEKKSFDVLDENL
                     LHFLRAKHG"
     gene            2118..3062
                     /locus_tag="ACJE1S_001001"
     CDS             2118..3062
                     /locus_tag="ACJE1S_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG0806561.1"
                     /translation="MAKIPVHVVTGFLGSGKTTFLKEILTNQALNDIALVINELGEVS
                     LDHKLVQTDFIEEQTLFLNAGCACCNKREDLQKKFKELLDNFENKGKKPQRVILETSG
                     LANPAPIIFTFQSDVFLANHFELANIITCIDAFEGLNHLQNEEAYNQILSSDFLILTK
                     KDLNPHTQSLEEKINTLYPNIQIISKENFNFDMLSSHHKIQREIKNIEIKSHKDDISS
                     ITLIFDKAINWNIFSIWLSMLLHEHGSKILRVKGLINTEESYLTNINGVGHLIYHPTH
                     TKISSLNHPSQLVFIAKNLKLDKIKESLENFLRLEQLN"
     gene            complement(3059..3925)
                     /gene="ftsY"
                     /locus_tag="ACJE1S_001002"
     CDS             complement(3059..3925)
                     /gene="ftsY"
                     /locus_tag="ACJE1S_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HGG0806562.1"
                     /translation="MFDFFKKGLAKTLESIVGVKGENKKITKDLLEEILLEADVAYEI
                     VEEIIYYLPPSDEVKKEDLKRVMGSYFLYENKEFLDEKPFVELILGVNGAGKTTSIAK
                     LANLYKSQGQKVILGACDTFRAGAIEQLRLWSEKVGVDIVLTQQGHDPSAVAFDTISK
                     ARAKGFDKVIIDTAGRLQNQKNLANELEKIVRISAKAMPHAPHRKILVLDGTQGNAGI
                     LQAKAFNELVQLDGVIITKLDGTAKGGALFSIARELELPILYIGVGEKMQDLIEFNAQ
                     NFLDTLLEGVFD"
     gene            complement(3925..4482)
                     /locus_tag="ACJE1S_001003"
     CDS             complement(3925..4482)
                     /locus_tag="ACJE1S_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HGG0806563.1"
                     /translation="MKIKKVFTLAILLSFFVACSNDKEKDQSDMNASVQSSLSQSENL
                     RFNLNLIDGNSIFIKKDNENLNFADGDKATLFVFFTTWCSPCIAEIPHLNKLQEKYEE
                     QFNIVGVLLEDKSDEELRAFAQKNQILYKIANGENNYLLAKILGGVNGIPTMFLYDKN
                     SQLINQYLGLIPEEMLEIDIQKAIL"
     gene            4563..5189
                     /locus_tag="ACJE1S_001004"
     CDS             4563..5189
                     /locus_tag="ACJE1S_001004"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HGG0806564.1"
                     /translation="MQKTSFRTLQKNRLAQHKKLKFKQDFIVFKECFNLIKKTKAKNI
                     LIFIPLGYEPNLLKFRHIFSKNHKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPMDSF
                     LKTKIDIAIIPVIGVDRELKRIGHGQGFYDRFFENLNYKPLVIFAQSINAISEKKLTQ
                     EHDIAGEFYINPYKKYYKKDNKYDRITYRTYNRYSRSWNRIFSCKKNQ"
     gene            5110..6663
                     /gene="rny"
                     /locus_tag="ACJE1S_001005"
     CDS             5110..6663
                     /gene="rny"
                     /locus_tag="ACJE1S_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HGG0806565.1"
                     /translation="MIESLIALITAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEDKTHKIQKEFNQKFDELSKKEQKLQLQEESL
                     KENQEELLRSKKQMLDLQSDADKLKKQYQTKLNDVLNILEHSAGLTQDEAKNIILEKV
                     EENSRNEIAHIVRRYEEEARNEAKRKANYIIAQATSRFAGEFAAERLINVVNIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDNAILEEGETILMDLGLSKVHPEITKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLRRVSELEEIAK
                     SKEGIKNAYAINAGREIRVIANAKLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAIEYAK"
     gene            6674..7231
                     /locus_tag="ACJE1S_001006"
     CDS             6674..7231
                     /locus_tag="ACJE1S_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG0806566.1"
                     /translation="MQDMIDTLLKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLAL
                     CISIAFVANTLGSTLLFILGKYYKKDIMPYFKNHRRKLALAMMKTKQHGVVLLITQKF
                     VYGLKTFIPIAAGIAKYKFINFFIINTFASLLWAVLLGYSAYAFGFAIEAIFNKLSSY
                     PYIAPLFLIVLVGIIWFYLTKFSKK"
     gene            7231..8490
                     /locus_tag="ACJE1S_001007"
     CDS             7231..8490
                     /locus_tag="ACJE1S_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HGG0806567.1"
                     /translation="MSFWNSLYLNLKEFRYLFLFGFIVFVFNIFLEYNHFLNLKEKKH
                     YLVENALLLQYYPKHNKNNKKYWVLKLKTKDFILYTTSFKDLNLSKNQLLNLKIITNN
                     ISFKDYLGKSFYAPSYGFEVLGYLKNNTLISYFLNQHTNEKIQEFYGALFFALPISSE
                     LRNDVNHYGVAHLIAISGYHIGLLFTLVFFILAPLYSFFQKRYFPYRSLRFDLSIFIF
                     ILLFAYAYLIGFVPSYVRSLIMALWGFYLLCKNIKILSFFTLFISIYLCIVLYPRLLL
                     SIGFFFSCLGVFYIFLYLHHFSKLFNNFLNIILVNIWTFFCMITPVLYFFPLISYQQF
                     LAIILSGIFIVFYPLVLCLHFIAHGNLLDPVLIDFFNLKFYALNIKIPTWALISYLIL
                     SFIAMRYKILALFCIFANFIPFIMIMI"
     gene            complement(8434..9240)
                     /locus_tag="ACJE1S_001008"
     CDS             complement(8434..9240)
                     /locus_tag="ACJE1S_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HGG0806568.1"
                     /translation="MKRIFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQIIFAFLIPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFS
                     GYDFVINRITKSEPKGLWQSISSYWTLLTLVPLGLGLSFYISGLIQKALDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYA
                     SVYGSFSTILFFFIWIYISWIVYLFGIKIYYFLNHNHDKGDKIRKNTKKS"
     gene            complement(9252..10634)
                     /locus_tag="ACJE1S_001009"
     CDS             complement(9252..10634)
                     /locus_tag="ACJE1S_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HGG0806569.1"
                     /translation="MKKEFEQYFIKLLGSENAYFDDIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDISKILKFCNENNIIIIPRGAGSGFTGGALAVNGGLILSFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQREVAKHGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPNGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIVLPKF
                     KKTAFGIFPSVKSAMNAVYKSLASGVNPVSMEFLDNLSIRAVESKFNKGLPVDAGAIL
                     IADVDGNVKEAIDEDLKILGEHFLDAGASQFKIAKDEQEAADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPALLEGIDEISKKYGFKIPCFGHTGDGNVHTNIMVPDKNDEEQ
                     VKKGYEAVEEVFKLTVELGGTLSGEHGIGLSKAPFMKLAFSDAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(10631..11323)
                     /locus_tag="ACJE1S_001010"
     CDS             complement(10631..11323)
                     /locus_tag="ACJE1S_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HGG0806570.1"
                     /translation="MSLFAIDLNLKPVKMELLKVEDIYGYVEDSPDIKLNSSGVVIQR
                     FQTSKSIIARASVIAKEKGLAKLKFSVFADLEQDALPLPNVVPQKGNEVVLNFLYDRG
                     LVIAPDEQTYNELVFSFPEIYFTHIDMLGAQLIRSSSLAPKRSDFRKFCADNAVGILI
                     FALEDKAKIVDCQDFSELYELTISKPSSIQVPFYSRIGGYKSNFFDFNSQEVGNYYRY
                     YDALINIPKVSQ"
     gene            11483..12643
                     /locus_tag="ACJE1S_001011"
     CDS             11483..12643
                     /locus_tag="ACJE1S_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG0806571.1"
                     /translation="MKKLLLLFAFVIQSFAALSVEELTWDNGDTLLKFLQRNSIPISL
                     YYGLDREDQELASDIAYKVKYQVLKDENNNIEQVLIPISDDLQIHIYKDKNNQYTLAF
                     SPISYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRSFRGSVNFRNIQKGDKVTL
                     YYEQKRRMGKLWGDIAIKMAVVEINKNAQEVFAFNDIFYNRDGKEVEAFLLTKPVNYT
                     RISSTFSTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGTITFVGTKGGYGNVIQVK
                     HDSGYMTLYAHLSRFAKIKKGQKVNQGQLIGYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKEEFKSTIVKYEGIINEALAANKPNPPKEEDFENYIEF"
     gene            complement(12640..12846)
                     /locus_tag="ACJE1S_001012"
     CDS             complement(12640..12846)
                     /locus_tag="ACJE1S_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806572.1"
                     /translation="MYEKKDLRVLKIIQKAREFGDGDLLNEALVNQLVNAEFKEIESK
                     EREELIALLNSLIEAKDKALLSNP"
     gene            complement(12851..13531)
                     /locus_tag="ACJE1S_001013"
     CDS             complement(12851..13531)
                     /locus_tag="ACJE1S_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HGG0806573.1"
                     /translation="MGRSGENCLSLLKNQKVSVFCAYDKDYNIFRAKVHKENLFSHLG
                     FKDIEKCVFMDQIHSNKVEIYDENLKNLSCDGLISIEKNTALCVLSADCLPLILWHES
                     GIIAALHSGRKGSFENILKECVDKIYTKNPNLDMQKFHLFILPSICAKNYEIDGEILE
                     FARVEFKDFLDERKLDLKALVKFQAQNLGIKNIIDSNICSFDDKTFYSYRRDKTLKRF
                     VSVVYLKG"
     gene            complement(13495..14106)
                     /gene="ribE"
                     /locus_tag="ACJE1S_001014"
     CDS             complement(13495..14106)
                     /gene="ribE"
                     /locus_tag="ACJE1S_001014"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004746 - riboflavin synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HGG0806574.1"
                     /translation="MFNGLIREIAKVKSYQNNVLNLKANYRPNLGDSVAVNGACLSVT
                     KLHSDGFELELSHESRKHIAVQNLKDKVHIEPALRYGDRIDGHLMQGHIDFIGRLEKI
                     EKDENGVDFYIALPKEAMKFMARKGSIGIDGVSLTINEIIENGVRLTIIPITFKETLF
                     KEYEIGREINIESDLLARYIYAQMQDKDKGLSWEEVERIAYLY"
     gene            complement(14116..16656)
                     /locus_tag="ACJE1S_001015"
     CDS             complement(14116..16656)
                     /locus_tag="ACJE1S_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806575.1"
                     /translation="MKKIFYGVAAFIVVLLIALYTLLFTSLGNNIVANFIQDKIKQST
                     GLDANITQFVLCFSSLDIEANLANMADLKLEGNLSLFKLGFDLDYIISLDKNYAKNLG
                     LNLNQNLAFLGKINGKSSDFMIDGKGYLFGSNVLLDARVYNYSPIALNLSANDLQISE
                     LLALFGRGNLAKGTIDIASKISAKDLKPDGNAIIKLDNTYINYAEIKKEFNIDLPENS
                     NLKAEILANIKDDTVYTVSKIYNSYLTLQTQKTLYNLIQNTLNTDFDLSVPNLAKLEK
                     LTKTKLNGSLGVKGDASVANNALTGLNANVIGLGGEVKANLKNNQLNLNASNASLEKI
                     LALIGYGGIVSGNLNANLVSEGLDFANFNADVKINNAKLNSAEIKKIAKLDLPNTNFS
                     LDAKAKAKNGNISYNALLASNLLNIKKLDGTYNLKNAELNTDLNAFIDDLSQFNAIAG
                     QKLQGKAELNAKAHIIGAQIQNLNANANIAGGLIKANSNGKKLDLDINKLDLSKVFTI
                     VGMPNYASGIVNASARLDDINFNNLNGKINAEAKGILNAVVLSQIMDKKFPSNTNYDL
                     NIKADLKNNIADFEGVLNSSLANLSNFKGKFDINKMVLNSDYVLDIADFSKLGFLLDR
                     KLKGKASFNGKIGFDKTLNFTALSKNLFEGKLDSTLKNNILNAKLEGVDLSTLASGLD
                     FIDIYQGKANLDAKYNLISEQGEVNADMKEGKLKPNAITAALKLITLKDITTDVFHTA
                     NTKALINKENIKLDLNMQADRSYVLVSSGMLNSKSGSLNLPFDIKIDRANFKGNITGT
                     TQKPQVKLEAGSVVNSIKNIVGDKAQDGVQKAGEKVDEGINKLLNKIF"
     gene            16819..17079
                     /gene="groES"
                     /locus_tag="ACJE1S_001016"
     CDS             16819..17079
                     /gene="groES"
                     /locus_tag="ACJE1S_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HGG0806576.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKIDNSEYLVLNLDDILGILK"
     gene            17100..18737
                     /gene="groL"
                     /locus_tag="ACJE1S_001017"
     CDS             17100..18737
                     /gene="groL"
                     /locus_tag="ACJE1S_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HGG0806577.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSNPY
                     ILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETSSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKINLDLKGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPAMPDMSGMGGMGGMGGMM"
     gene            complement(18773..19015)
                     /locus_tag="ACJE1S_001018"
     CDS             complement(18773..19015)
                     /locus_tag="ACJE1S_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:pantothenate symporter"
                     /protein_id="HGG0806578.1"
                     /translation="MSLTHNDLSNLCILISLLFLEYILINAKTFRQMTRFANFYGVIM
                     VLSFIVSWQIFNAYFNFLVFLILFFVSYKIWQFKKK"
     gene            complement(19006..19227)
                     /locus_tag="ACJE1S_001019"
     CDS             complement(19006..19227)
                     /locus_tag="ACJE1S_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806579.1"
                     /translation="MNHEKSLIYLIALCLSYTAMQAVCKYAEEQREDRAVPIAALIRL
                     GMGYGISYANAPGVGEQTYIGRPPFGGCH"
BASE COUNT         6856 a         3219 c         2869 g         6299 t
ORIGIN      
        1 aaaggctaga gtatgcaaaa attactaaaa gtcgccctaa tccaatttgc tccaaaatct
       61 tacgaggttc aaaacaatct cgataaagcc ttaaagcttg cccatcttgc attagagcaa
      121 ggtgctaggc tgatagtttt gcctgaactt tacgatagtg cttattgcgt ggaagatcaa
      181 gatgaaaaat ttagcttaaa tttacatcaa gcacatccta atcttgatgc attacaaaaa
      241 ttagctaaaa actatcaagc ttatatcgta gcatgttcta tagaaaaaga tacccaactt
      301 tatgatagtg cttacatcat tagtcacaaa ggtcttttag gtgtttatag aaaaatttat
      361 ctttggggta atgaaaaaga aagatttgca agaggagata aatatcctat ttttgaacta
      421 gaatttgaaa attttaaact caaattaggt ttgcaaattt gttatgaaat aggctttagc
      481 gaaggatcta gatttttagc gcttcaagga gctgaaatca tttgctttcc ttcagctttt
      541 ggaaaagcaa gaacttatgt ttgggatcta gcaagtagat ctagagcctt agaaaatggt
      601 gtttttgtct tggctgctaa ccgatctgga agtgaaattt ctaagataaa taatgaaact
      661 ttaacctttg ctggaaaatc aaaaattatc aatcctaaag gagaaattat aaaagagatc
      721 ttagaagaag aaggttttat catagctgaa cttgatctta aagaagttca aattcaaaga
      781 aaaaatttac cttatcttaa ggatttaaat ctcaaattaa atcaagaaat attaacaaac
      841 atccatctta atacaaagga gtaaaaatgg caaaagaaat tctagttgct tatggcgtgg
      901 atattgatgc ggtagcagga tggctaggaa gctatggagg tgaggattct cctgatgata
      961 tttcaagagg tctttttgcg ggtgaagtgg gtatccctag gctcttaaaa ctctttaaaa
     1021 aatataatat tcctgcaact tggtttgctc caggacattc catagaaacc tttcctgaac
     1081 aaatgaaaat gatagtggat gcaggacatg aaataggtgc ccatggatat tcacatgaaa
     1141 atcctattgc aatgagtgct aaacaagaag aagatgtttt acttaaaagt atagaactta
     1201 tagaaaaaat cagcggaaaa aaaccaagtg gatatgtggc accttggtgg gaattttcaa
     1261 atatcaccaa tgagctcttg cttaaacacg gcatcaaata cgaccattct ttaatgcata
     1321 atgacttcac accttattat gtgcgtgttg gagacaaatg gactaaaatt gattatagta
     1381 aagatgccaa agaatggatg aagcctttgg tacgcggaca agaaacagat ttgattgaaa
     1441 ttcctgcaaa ttggtattta gacgatcttc ctcctatgat gtttataaaa aaatctccaa
     1501 atagctttgg ttttgtctct ccaagagata taggccaaat gtggatagat cagtttgatt
     1561 gggtttatag agaaatggat tatgctattt ttcctatgac tatacatcct gatgtaagcg
     1621 ctagacctca agttttactc atgcatgaaa gaattattga acatatcaat aaacacgaag
     1681 gtgtaaaatg ggtaaattta aacgatatgg cggatgattt ttcaaaacgc tttccaagaa
     1741 aaaaataaat ttgcaaggct tttagccttg tgaattcaaa aggataaaaa tgtgtatttt
     1801 atgtggcgaa atgataagta ctttacattg gagtgaatta aattttaaag aagaaaaaca
     1861 cgaacttagc gtaggtgaag aacaaaaaga aagattaagg ataagactta aaaaagtcaa
     1921 aattttaaat gaaattttag aattttatgg attaaaactt aaagaatggc aaaattcaaa
     1981 atacatacta agcaataaaa aagggcgtga tattatcgtt aatgatttgg gcgatttgtg
     2041 gattaaggct agcgagcttg aaaaaaaatc atttgatgta ttagatgaaa atctacttca
     2101 ttttttaaga gctaagcatg gctaaaattc ccgttcatgt tgttaccggt tttttaggaa
     2161 gtggaaaaac aaccttttta aaagaaatat taaccaatca agctcttaac gatatcgctc
     2221 ttgtaatcaa cgaactaggg gaagtttctt tagatcataa actcgtacaa acagatttta
     2281 tcgaggagca aactttattt ttaaatgcag gttgtgcttg ctgcaataaa agagaagatt
     2341 tgcaaaagaa atttaaagaa ttgcttgaca attttgaaaa caaaggtaaa aaacctcaaa
     2401 gagtcatact agaaacctca ggcttagcaa atcctgcacc tattatcttt acttttcaaa
     2461 gtgatgtgtt tttagccaac cattttgaat tagccaatat tatcacttgt attgacgctt
     2521 ttgaagggct taatcactta caaaatgaag aagcttacaa tcaaatatta agctctgatt
     2581 ttttaatact cacaaaaaaa gatcttaatc cccataccca aagcttagaa gaaaagataa
     2641 acactttata tcctaatata caaatcataa gcaaagaaaa ttttaatttc gatatgcttt
     2701 ctagccatca taaaattcaa agagaaatta aaaatataga aataaaaagc cataaagatg
     2761 acataagttc tataactctt atttttgaca aggctataaa ttggaatatt tttagcattt
     2821 ggcttagcat gcttttacat gaacacggat caaaaattct aagagtaaaa ggacttatca
     2881 atacagagga atcttatcta accaacatta atggagtagg acatctgatt tatcatccta
     2941 cgcatactaa aatttcaagc cttaatcatc cttcgcaatt ggtatttata gcgaaaaatt
     3001 taaagctaga taagattaag gaatctttag aaaatttttt aaggcttgaa caattaaatt
     3061 aatcaaaaac accctctaaa agtgtgtcta agaaattttg tgcattaaat tctatcaaat
     3121 cttgcatttt ttcacccacc cctatataca aaataggaag ttctaattca cgcgctatac
     3181 taaaaagcgc tccacccttt gctgtgccat caagtttagt aataataact ccatcaagct
     3241 gaacaagttc attaaaagct ttagcttgta aaatgccggc attgccttga gtgccatcaa
     3301 gtactaaaat ttttctatgc ggggcatgag gcatagcttt agccgaaatt ctaacgattt
     3361 tctctagctc attggctaaa tttttttgat tttgcaaacg acccgctgta tcgatgataa
     3421 ccttatcaaa acccttagct ctagccttgc taatagtatc aaaagcaacc gccgaaggat
     3481 catgaccttg ttgggttaaa actatatcta cccctacttt ttcagaccaa agtcttagct
     3541 gctctatcgc ccctgcccta aaagtatcac aagcgcctaa aatcactttt tgaccttggc
     3601 ttttgtataa attagcaagc ttagctatac tcgtggtttt acccgcgcca tttaccccta
     3661 aaataagctc cacaaaaggc ttttcatcta agaattcttt attttcgtaa agaaaataag
     3721 aacccatcac acgctttaaa tcttcttttt taacctcatc actgggtggt aaataataaa
     3781 tgatttcttc tacgatctca tacgccacat ctgcttcaag taaaatttcc tctagtaaat
     3841 ctttggtaat ttttttattt tcacctttaa cacccactat actttcaagg gtttttgcaa
     3901 gtcctttttt aaaaaaatca aacattaaag tatcgccttt tgtatatcaa tttctaacat
     3961 ttcttctgga atcaatccta agtattgatt tataagctga gagtttttat catataaaaa
     4021 catagtagga attccattaa ctccgcctaa aattttagct aaaagataat tattttcacc
     4081 attggctatt ttatataaaa tctgattttt ttgagcaaaa gctctaagct cctcatcact
     4141 cttatcttca agtaaaacac ccactatatt aaactgctct tcatattttt cttgaagctt
     4201 attaagatgc ggaatctctg caatacaagg ggaacaccaa gtagtaaaaa acacaaacaa
     4261 agttgcttta tctccatcag caaaatttaa attttcatta tcttttttta taaaaattga
     4321 atttccgtct attaaattga gattaaatct caagttctca ctttgactta agcttgattg
     4381 aacgcttgca ttcatatcac tttgatcttt ttctttatca ttgctacaag caacaaaaaa
     4441 actcaagagt atagctagtg taaatacttt tttaattttc attctattat tttccttgta
     4501 tctttgtaaa aaatgttaaa attatatcat agttaagata ataattttta aaaaggcaca
     4561 cgatgcaaaa aacatctttt aggactttgc aaaaaaaccg tctcgcgcaa cacaaaaaac
     4621 ttaaattcaa gcaagatttc atagtgttta aggaatgttt taacttgatt aaaaaaacaa
     4681 aagcgaaaaa tattctaatt ttcattcctt taggatatga gccaaattta ctcaaattta
     4741 gacatatttt tagtaaaaat cataaacttt ttgtcccatt tatgcaagat aaaagtttaa
     4801 aaattgtaaa attaagattg ccttttatta aaaaaaggtt tggggtatta gaacccatgg
     4861 actccttttt gaaaactaaa attgatatag ctatcatacc cgtgatagga gtagatagag
     4921 aattaaaaag aataggacat gggcaaggtt tttatgatag attttttgaa aatttaaact
     4981 ataaacctct tgtaattttt gctcaaagta tcaatgctat aagtgaaaaa aaattaaccc
     5041 aagagcatga tattgcgggt gaattttata tcaaccctta taaaaaatac tacaagaaag
     5101 acaacaaata tgatagaatc acttatcgca cttataaccg ctatagtcgg tcttggaata
     5161 ggatatttag ttgcaaaaaa aatcaatgat gctaaatatg aaatttttgt tgagcaagca
     5221 aaagcgaaag caaaagctat agaatacgaa gctgaactga ttttaaaaga tgccaaaaat
     5281 tcaatcctta atgccgaact tgaagtgaaa aaaaaatacg aggataaaac tcacaaaatt
     5341 caaaaagaat tcaatcaaaa atttgatgaa ttatccaaaa aagagcaaaa acttcaactt
     5401 caagaagaaa gcttaaaaga aaatcaagaa gaattattac gctctaaaaa acaaatgctt
     5461 gatttacaat cagatgctga caagcttaaa aaacaatacc aaacaaaact caatgatgtt
     5521 ttaaatattt tagaacattc agcagggctc actcaagatg aagcaaaaaa tatcattctt
     5581 gaaaaagtag aagaaaactc acgcaatgaa attgctcata tcgttaggag atatgaagaa
     5641 gaggctagaa atgaggctaa aagaaaggca aattacatca tagcacaagc aacctctcgt
     5701 tttgcaggag aatttgctgc tgaaagactt attaatgttg tcaacatcaa aaacgatgag
     5761 ttaaaagggc gtatcatagg caaagaagga cgcaatgtta aaaccttaga aatggtttta
     5821 ggagtagata tcatcatcga tgatacacct ggagccatca tagtaagttg ctttaatctt
     5881 tatcgccgtg ctattgcaac taaggtgatt gaacttttag tagaagatgg aagaattcag
     5941 cctgctcgca tagaagaaat tcacgaaaaa gtatgcaaag aatttgataa tgctatttta
     6001 gaagaaggtg aaactatact gatggactta gggctttcta aggtccatcc agaaatcacc
     6061 aaacttatag gaaagcttaa ataccgcgca agctatggac aaaatgcttt agcacattct
     6121 ttagaagtag ctcatttagc aggaatcatc gctgctgagt gtggagggga tgaaaattta
     6181 gcacgacgcg caggaatttt acacgacata ggcaaagctt taacgcatga ttttgaaggc
     6241 tctcatgtag acttaggagc agaactttgc aaacgctata aagaacatcc tgtggttatt
     6301 aatgctattt atgctcacca tggacatgaa gaagctacaa gcatagaatc agcagccgtt
     6361 tgcgcagccg atacgctcag cgctgcaaga ccgggtgcta gacgcgaagt cttagaagct
     6421 ttcttaagaa gagtaagcga gcttgaagag attgctaaaa gcaaagaagg tattaaaaat
     6481 gcttatgcga ttaatgcggg aagagaaatt cgtgtcattg caaatgcaaa acttgtaaat
     6541 gatgatgaaa gcgtgctttt agccaaagaa atagctgctg aaattcaaga aaaaatgcaa
     6601 taccctggag aaatcaaggt aaatgtcata cgcgaactaa gagccataga atacgccaaa
     6661 taagagagct aatatgcaag atatgataga taccttacta aaatacggct atatagtttt
     6721 atttttctat tctttaggtg gtggaatggt aggaatttta gccgctggag ttttaagctc
     6781 tcaaggaaaa atggatttgg ctttatgtat aagcatagct tttgtggcta atactttggg
     6841 ttctaccttg ctttttatac ttggaaaata ctataaaaaa gatattatgc cttattttaa
     6901 aaatcatcgc cgaaaacttg cccttgctat gatgaaaacc aaacaacatg gagtcgtttt
     6961 gcttataact caaaaatttg tctatggctt aaaaactttt atccccatag ctgcaggcat
     7021 agcaaaatat aaatttatta attttttcat catcaatact tttgctagtt tactttgggc
     7081 agtgctttta ggatatagcg cttatgcatt tggttttgcc atagaagcaa tttttaataa
     7141 gttaagctct tatccttata ttgcaccttt atttttaatc gtattggttg gaattatttg
     7201 gttttatttg actaaatttt ctaaaaaata atgtcttttt ggaattcttt atatctaaac
     7261 cttaaagaat tccgttattt atttttattt ggctttattg tttttgtttt taatatattt
     7321 ttagaatata atcatttttt aaaccttaaa gaaaagaaac attatctagt agaaaatgcc
     7381 ttgcttttac agtattatcc aaaacataat aaaaacaata aaaaatactg ggttttaaaa
     7441 cttaaaacaa aggattttat cctttatact acaagcttta aggatttaaa tttaagcaaa
     7501 aatcagcttt tgaatttaaa aataatcaca aataatattt cctttaagga ttatcttgga
     7561 aaaagctttt atgctcctag ctatggtttt gaagtattag gatatcttaa aaacaatact
     7621 ctcatttctt attttttaaa ccaacataca aatgaaaaaa tacaagaatt ttacggagct
     7681 ttattttttg ccctacccat ctcctcagaa cttagaaacg atgttaatca ttatggtgtt
     7741 gctcatttaa tagcaatcag tggttatcat ataggtttac tttttacttt ggtatttttt
     7801 atactcgcac ccttgtatag tttttttcaa aaaagatatt ttccctatag aagcttacgc
     7861 tttgatttaa gcatttttat ttttatcttg ctttttgctt atgcttatct tataggcttt
     7921 gtgccttctt atgttcgttc tttaatcatg gctctttggg gtttttatct gctttgtaaa
     7981 aatatcaaaa ttctaagctt ttttaccctt tttataagta tatatctttg tatagtcctt
     8041 tatcctaggc ttttattgag tataggattt ttcttttctt gcctaggagt tttttatatt
     8101 tttttatatt tgcaccattt ttcaaaatta tttaacaatt tcttaaatat catcttagtg
     8161 aatatatgga catttttttg tatgattact cctgtgcttt atttctttcc tcttatcagc
     8221 tatcagcaat tcctagccat tattttgagt ggaattttta tagtctttta tcctttggtt
     8281 ttatgtttgc attttatagc acatggaaat cttttagatc ctgtattgat tgactttttt
     8341 aatcttaaat tttatgcttt aaatattaaa ataccaactt gggctttaat atcctatctc
     8401 atactttctt tcatagctat gcgttataaa attttagctc ttttttgtat ttttgcgaat
     8461 tttatcccct ttatcatgat tatgatttaa aaaataataa attttaatcc caaaaagata
     8521 aacaatccaa gaaatataaa tccaaataaa gaaaaaaagt atagtagaaa aagaaccata
     8581 aacactagca taagttttgt tataaactat ataatacaca aacaaattct ttcctatata
     8641 ccaaatagct cccgccgcaa aagaaacgaa tatcaagctt ttaagagttc ctttttgaat
     8701 agaacttgaa taagatataa aaaacaaacc ccaaatgatc acaaaaggca aaatttcaaa
     8761 aaaattaaaa cctattttat aatcatccaa agctttctga atcaaacccg atatataaaa
     8821 actaagtcct aagcctagtg ggacaagggt taaaagcgtc cagtaagaac taatactttg
     8881 ccaaagtcct tttggctcac tttttgtaat gcgattgatt acaaaatcat agcctgaaaa
     8941 aaaagccaaa gaagtaaagg tcatcgctat aagacccact atacccaaat ttacactatt
     9001 atttaaaaat gtgtcaagat aagcagcaac tatatcttgc tgtgcaggta ttaaaaaagc
     9061 aaaaatgatt tgcttggctt tttcataata agccttaaaa cttgaaattt gcgtaaaaac
     9121 agaaaaacac acaaacaaaa ttggtatcaa agataaaata gtataaaaac taagcgctgc
     9181 ggcataattt aaaatttctt tatctcgcaa attggataaa atagcaaaaa ttctcttcaa
     9241 tcttttcctt tttaaagccc cattttaaaa ggattgagaa tattatttgg gtcaaaagct
     9301 tttttaatat ttctcattaa attcatttcg gcatcagaaa aagctaattt cataaaagga
     9361 gccttagaaa gtcctattcc atgctctcca cttaaagttc ctccaagctc cacagtaagc
     9421 ttaaatacct cttctactgc ttcatagcct ttttttactt gttcttcatc atttttatca
     9481 ggaaccataa tattagtatg cacatttcca tcaccagtat gaccaaaaca aggaatttta
     9541 aaaccatatt ttttagaaat ttcatctata ccttcaagta aagcaggaag ttttgacctt
     9601 gggacagtaa tatcttcatt taattttaaa gtcccataca tagctatact ttgagaacaa
     9661 tttcttctag caaaccaaat atctgctgct tcttgctcat ctttggctat tttaaactga
     9721 cttgctcctg cgtctaaaaa atgctctcct aaaattttca aatcttcatc aatagcttct
     9781 tttacattgc catctacatc agcaatcaaa atagctcccg catccacagg caaacctttg
     9841 ttaaatttac tttctactgc tctaatgcta agattatcta aaaattccat agatacagga
     9901 ttaaccccac ttgcaagact cttataaact gcattcatag cgctttttac acttggaaaa
     9961 attccaaaag ctgttttctt gaatttaggc aagacaataa gctttaaggt aagctcactt
    10021 aaaaccgcta aagaaccctc actcgcgatt aaaatacctg cgagattata tcctgcaaca
    10081 tctttgatgg tgcgtttacc cgcacgaatg atttccccat taggcaacac agcccttaaa
    10141 gccataacat aatctttagt aatgccatac tttgcagctc tcatacctcc agcattttca
    10201 cttacattgc ctcctaagct agaatactcc atgctagcag gatcgggcgg ataaaaaagt
    10261 ccatgcttag ccacttctct ttgtaaatgt atattaatca cacctggttg cactactgcg
    10321 actaaatttt caagatcgat ttctagaatt ttattcatat gtttttcaaa gcttaaaatc
    10381 aaacctccat taacagccaa agctcctcct gtaaaacccg aacccgcccc acgaggaatg
    10441 ataatgatat tattttcatt acaaaatttt aatattttag aaatatcctc ctcgtttctt
    10501 ggaaacagca ccccatcggg caaataatgc ttttttgtag catcataact ataagcacgc
    10561 ttatgaatat catcaaaata agcattttca ctacctagaa gttttataaa atattgttca
    10621 aattcttttt tcattggctt accttaggaa tattaattaa agcatcataa tatctataat
    10681 aattacccac ttcttgggaa ttaaaatcaa aaaaattact tttataacca cctatacgag
    10741 aataaaaagg aacttgtata ctgcttggtt tagatatggt taattcataa agctcactaa
    10801 aatcttgaca atcaactatc tttgccttat cctctaaagc aaaaatcaaa attcccacag
    10861 cattatcggc acaaaatttt ctaaaatcac tacgctttgg agcaagagat gaagagcgga
    10921 tgagttgtgc tcctagcata tcaatatgag taaaataaat ttctggaaag ctaaatacaa
    10981 gctcattata agtttgttca tctggagcaa tcactaaacc tctatcataa agaaaattta
    11041 aaaccacctc attacccttt tgtggtacaa catttggcaa aggcaaggca tcttgctcaa
    11101 gatcagcaaa aacactgaat tttaattttg ccaaaccctt ttctttagct ataacactag
    11161 ctcttgctat aatgcttttt gaagtttgaa aacgctgtat aacaacaccg cttgaattta
    11221 attttatatc aggactatct tcaacataac cataaatatc ttcaaccttt aaaagttcca
    11281 tttttacagg ctttaaattt aaatctattg caaaaagact catacttaag cttaaaataa
    11341 atgctagaaa tttaagcaaa ctaactcctt aaaaaatcaa tttaatgtat tataatcctt
    11401 ttttgttaag caattgtaag aattataaag taaaatatag cttttaaaaa tttaaaaatc
    11461 ctcgaaaaaa taaggtcttt atatgaaaaa actcttactc ctatttgcat ttgttattca
    11521 aagttttgcc gcacttagcg ttgaagaact tacttgggat aatggcgata ctttgcttaa
    11581 attcttgcaa agaaattcta tccctatatc gctttattat gggcttgata gagaagatca
    11641 agaacttgcc tctgatatag cttataaagt aaaatatcaa gttttaaaag atgaaaataa
    11701 taatatagaa caagttttaa tccctatcag tgatgattta caaattcata tttataaaga
    11761 taaaaacaat caatacaccc ttgccttttc tcctatttct tatcaaaaag aagatagaat
    11821 tttacattta acaatcaaaa gttcagccta tcaagatgtt tatgaagaaa gtggtagcag
    11881 tactctagct cgtgctatgg tgcgctcctt tcgaggaagt gttaactttc gcaatatcca
    11941 aaaaggcgat aaggttactc tttattatga gcaaaaaaga cgcatgggaa aactttgggg
    12001 ggatattgct ataaaaatgg ctgtagtaga aattaacaaa aatgcacaag aagtattcgc
    12061 ttttaatgat attttttaca atcgcgatgg aaaagaagtg gaagcttttt tattaaccaa
    12121 acctgtaaat tatacaagaa tatcatcaac ttttagtact gcaagatatc atcctatact
    12181 caaacgctat cgtgcacacc ttggtataga ctatgcagcg cctactggaa cgcctgtaaa
    12241 aagtgcaggc aaagggacaa tcacttttgt aggcactaaa ggaggatatg gaaatgtcat
    12301 acaagtaaag catgattcag gctatatgac tttatatgct catttaagtc gttttgcaaa
    12361 aattaagaag ggccaaaaag taaatcaagg tcaactcatt ggttatgtag gttcaacagg
    12421 catgagtaca ggcccacatt tacattttgg tgtttatcta aacaataaag ccatcaatcc
    12481 tgcttcagta gttaaaatcg ctaaatcaga gctaagcgga aaagccaaag aagaatttaa
    12541 aagcactata gtaaaatatg aaggaattat aaacgaagcc ttagctgcta ataagccaaa
    12601 tcctcctaaa gaagaagatt ttgaaaatta tatagaattt taaggattgc taagcaaagc
    12661 cttatcttta gcttctatca aggaattaag aagagctata agctcttctc tttctttgct
    12721 ttctatctct ttaaattcag cattaacaag ctgatttact aaagcttcat taagcaaatc
    12781 cccatcccca aactctctag ctttttgaat aatttttaat actcttaaat cttttttttc
    12841 atacatcaaa tcaacccttt agataaacaa cactcacaaa gcgttttaaa gtcttatcgc
    12901 gacgataaga gtaaaatgtc ttatcatcaa aactacaaat attactgtcg ataatatttt
    12961 taatacctaa attttgagcc tgaaatttta ccaaagcttt taaatcaagt tttctttcat
    13021 ctaaaaaatc tttaaattct actcttgcaa attctaaaat ttctccatct atttcatagt
    13081 ttttagcaca aatactaggc aagataaaaa gatgaaattt ctgcatgtct aaattaggat
    13141 tttttgtata aattttatcc acacactctt ttaaaatatt ttcaaaactc ccttttcttc
    13201 ctgaatgaag tgccgctata atgccacttt catgccataa aatcaaaggc aaacaatcag
    13261 cacttaaaac acaaagtgcg gtattttttt ctatacttat caagccatcg caacttagat
    13321 tttttaaatt ctcatcataa atttcaactt tattggagtg aatttgatcc ataaaaacac
    13381 atttttcaat atccttaaaa cccaaatgag aaaataaatt ttctttatga actttggctc
    13441 taaagatatt atagtcttta tcataagcgc aaaaaacact gactttttga ttctttagta
    13501 aagataagca attctctcca cttcttccca tgatagtccc ttatccttat cttgcatttg
    13561 tgcataaata taacgagcaa gcaaatcgct ttctatattg atttctcggc ctatttcata
    13621 ttctttaaaa agtgtttcct taaaagtaat aggtataatg gttaatctaa cgccattttc
    13681 tataatttca ttgatcgtaa ggctaacccc atctatacct atactgcctt ttcttgccat
    13741 aaatttcatc gcttctttag gcaaagctat ataaaaatca accccatttt catctttttc
    13801 aatcttttca agcctaccaa taaaatcaat atgtccttgc atcaaatgtc catctatcct
    13861 atctccatac cttaaagcag gttctatatg caccttatct tttaaatttt gtactgctat
    13921 gtgcttgcga ctctcgtgtg aaagttcgag ttcaaaacca tcgctatgaa gtttagtcac
    13981 gctcaaacaa gctccattaa cagctacact atcgcccaaa ttagggcgat aatttgcctt
    14041 taaattcaaa acattatttt gataagattt aaccttagca atctctctta taagtccatt
    14101 aaacatcact taaccttaaa aaattttatt caataattta ttgataccct catctacttt
    14161 ttctcctgct ttttgaactc catcttgggc tttatcacct acaatatttt taatggaatt
    14221 tactacacta cccgcttcaa gtttaacttg gggcttttgt gttgttcctg ttatattgcc
    14281 tttaaaattg gctctatcta tcttgatatc aaaaggcaaa ttcaagcttc cgcttttaga
    14341 attcagcata cctgaagaaa caaggacata agaacgatcc gcttgcatat ttaaatcaag
    14401 cttgatgttt tctttgttaa taagcgcttt agtattggca gtatgaaaaa catcagtagt
    14461 gatatctttt aaagtaataa gcttaagagc tgcagtgata gcattaggtt taagcttacc
    14521 ctctttcata tctgcattaa cctctccttg ctcgcttata agattatact tagcatctaa
    14581 atttgccttg ccttgatata tatctataaa atcaagtcca cttgccaaag tacttaaatc
    14641 cactccctct aactttgcat ttaaaatatt atttttcaaa gtactatcaa gttttccttc
    14701 aaataaattt ttactcaatg cagtaaaatt taaagtttta tcaaaaccaa tttttccatt
    14761 aaaactcgcc tttcctttga gttttctatc gagtaaaaaa cctagctttg aaaaatcagc
    14821 aatatctaaa acataatccg aatttaacac cattttgtta atgtcaaatt ttcctttaaa
    14881 attactaaga ttagccaaag aagaatttaa aacaccctca aaatcagcga tattattttt
    14941 taaatctgct ttgatattta aatcataatt tgtattgctt ggaaattttt tatccattat
    15001 ctgacttaaa actacagcat ttaaaatacc tttagcttct gcatttatct tgccattaag
    15061 attgttaaaa tttatatcat ctaaacgcgc actagcatta actatcccgc ttgcataatt
    15121 tggcatacct acaatagtaa aaaccttgga aagatcaagc ttgtttatat ctaagtctaa
    15181 tttttttcca ttagaatttg ccttgattaa tccacctgct atatttgcat tagcatttaa
    15241 attctgaatt tgagcgccta taatatgtgc ttttgcgtta agttctgcct tgccttgtaa
    15301 cttttgtcct gctatggcat taaattgaga taaatcatca ataaaagcat ttaagtctgt
    15361 gtttaattct gcatttttaa gattgtaagt tccatcaagt tttttaatat tgagcaaatt
    15421 agacgctaaa agcgcattat aagatatatt gccattttta gctttagctt tggcatcaag
    15481 actaaaattt gtatttggaa gatcgagctt ggctattttt ttaatttcag cactatttaa
    15541 ttttgcatta ttgattttta catctgcatt gaaatttgca aaatccaatc cctcgcttac
    15601 aagatttgca tttaaatttc cagaaacaat accaccatag cctataagag ctagtatttt
    15661 ttccaagcta gcattgcttg cattaagatt taattgattg ttttttaaat ttgccttcac
    15721 ttctccgcca agccctataa cattagcatt taaaccagtt aaagcattat tagctacact
    15781 cgcatcaccc tttactccta aagatccatt tagctttgtt tttgtaagct tttcaagttt
    15841 tgcaagatta gggactgata gatcaaaatc cgtatttagg gtattttgaa taagattata
    15901 aagggttttt tgagtttgta aagttaaata actattataa attttactca ctgtatagac
    15961 tgtatcatct ttaatatttg ctaaaatttc agctttaaga ttggaatttt caggtaaatc
    16021 tatattgaat tcttttttaa tttctgcata atttatataa gtattatcaa gtttaatgat
    16081 agcatttcca tcaggtttta aatctttagc agaaatttta cttgctatat ctatagttcc
    16141 tttggctaaa tttcctcgtc caaaaagtgc tagcaattca gaaatttgaa gatcgttagc
    16201 gcttaaattt aaagcaatag gagaataatt ataaactctt gcatctaaaa gcacattaga
    16261 gccaaacaaa taccccttgc catcgatcat aaaatcgctc gatttgccat taatctttcc
    16321 caaaaaagcc aaattttgat ttaaatttaa acctaaattt ttagcataat ttttatccaa
    16381 actgataata taatcaagat caaagccaag tttaaataga cttaaatttc cttctagttt
    16441 taaatcggcc atattggcta aatttgcctc aatatcaaga cttgaaaaac acaaaacaaa
    16501 ctgagtaata ttggcatcaa gacctgtact ttgcttgatt ttatcttgaa taaaatttgc
    16561 gactatatta ttaccaaggc tagtaaaaag caaggtataa agtgcgatta aaagcaccac
    16621 aataaaagcc gctactccat aaaatatttt cttcacttta aatcctttag ttttttttat
    16681 taattaactt tagtctaatt aactaaagtt ttataaatat ttttactcaa agtattgaca
    16741 aaattcattt tttatagtat gatattatca ctcaaaatta aagagtgcta aaaatcaata
    16801 tttttaagga tggacaaaat gaattttcaa cctttaggaa agcgtgtttt agtaaaacgc
    16861 gtagaagaaa ccaaaacaac agcttcaggt ataattatac cagataatgc taaagaaaag
    16921 cctttaatgg gtgaagtagt agcagtaagt aaagaaatca ctgatattgc aaatggtgat
    16981 aaaatcgtat ttgctaaata tggcggaaca gaaatcaaaa ttgataatag cgaatattta
    17041 gttttaaatt tagatgatat tttaggaatt ttaaaataat ttataaaaaa ggataaaaaa
    17101 tggcaaaaga aattattttt tcagatgaag caagaaacaa actttatgaa ggtgttaaaa
    17161 aattaaatga tgcagtaaaa gttactatgg gaccaagagg acgcaatgtt ttaatccaaa
    17221 aaagctttgg tgctccaagc attactaaag atggcgtaag tgttgctaaa gaagtagagc
    17281 ttaaagatag tcttgaaaat atgggtgctt cacttgttag agaagtggca agcaaaacag
    17341 cagatcaagc aggtgatggc acaacaactg caactgtttt agcgcatgct atttttaaag
    17401 aaggtttaag aaatatcaca gcaggtgcaa atcctatcga agtaaaacgc ggtatggata
    17461 aggcttgcga agctatagta gcagaactta aaaaactttc tcgcgaagta aaagataaaa
    17521 aagaaattgc acaagttgct acaatttcag ccaactctga tgaaaaaatc ggaaatttaa
    17581 ttgctgatgc tatggaaaaa gtaggcaaag atggtgttat cactgttgaa gaggcaaaat
    17641 caatcaatga tgaattaaat gtagttgaag gtatgcaatt tgacagaggt tatttaagcc
    17701 cttattttat aaccaatgca gaaaaaatga cggtagaact ttcaaatcct tatatcttgc
    17761 tttttgataa aaaaattgca aatttaaaag atttgttacc ggttttagaa caaattcaaa
    17821 aaacagggaa accactttta atcatcgctg aagatatcga aggtgaagca cttgcaactt
    17881 tagttgtaaa caaactacgc ggcgtattaa atatctctgc tgtaaaagct ccaggttttg
    17941 gagatagaag aaaagctatg cttgaagata tagcgatttt aacaggtggt gaagtgatct
    18001 ctgaagagct tggaagaact cttgaaagcg ctacaataca agatcttgga caagcttcaa
    18061 gcgtaatcat cgataaagat aacacaacca tcgtaaatgg cgcaggcgaa aaagcaaata
    18121 ttgatgcaag agtaaatcaa atcaaggctc aaatagctga aacaagctct gattatgata
    18181 gagaaaaatt acaagaaaga cttgctaaat taagcggtgg tgttgcagtt atcaaagtag
    18241 gtgcggcaac tgaaactgaa atgaaagaga aaaaagatcg cgttgatgat gctttaagtg
    18301 caactaaagc agcagttgaa gaaggtatag taataggcgg tggcgcagct ttaatcaaag
    18361 ctaaagctaa aatcaatctt gatttaaaag gtgatgaagc tatcggcgcg gctatagttg
    18421 aaagagcttt aagagcacct ttaagacaaa tcgctgaaaa tgcaggattt gatgcaggtg
    18481 tagttgtaaa cagcgttgaa aatgctaagg atgaaaatac aggttttgat gctgcaaaag
    18541 gcgaatatgt aaatatgctt gaaagtggaa ttatcgatcc agttaaagta gaaagagtag
    18601 ctttacttaa tgcagtttct gtagctagta tgcttttaac cacagaagca acaatcagcg
    18661 agatcaaaga agataaacct gcaatgcctg atatgagtgg catgggcgga atgggtggca
    18721 tgggcggaat gatgtaagcc ctactacgaa taatcagcaa attccttgct gattatttct
    18781 ttttaaactg ccaaatttta taagatacaa aaaataaaat caaaaaaaca agaaaattaa
    18841 aatacgcatt aaaaatctgc caagatacga taaaagacaa taccataatc acgccataaa
    18901 aatttgcaaa gcgagtcatt tgcctaaaag tcttcgcatt tatcaaaata tactctaaaa
    18961 ataaaagtga aattaagata caaagattgc ttaaatcatt gtgtgtcaat gacatccccc
    19021 aaaaggtggt cttcctatgt atgtttgctc tccaacacct ggtgcattag catacgaaat
    19081 gccataaccc ataccaagcc ttattaaagc agcaataggc acagccctat cttctctttg
    19141 ttcttcggca tatttacaaa cagcttgcat agctgtataa gacaaacata aagctatgag
    19201 ataaatcaaa cttttttcat ggttcatttc tctcctttgt aat
//
LOCUS       DBBXOW010000031        19162 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.032, whole genome shotgun sequence.
ACCESSION   DBBXOW010000031 DBBXOW010000000
VERSION     DBBXOW010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19162
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.032"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            109..879
                     /locus_tag="ACJE1S_001020"
     CDS             109..879
                     /locus_tag="ACJE1S_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG0806580.1"
                     /translation="MKKFLTAFLVAFTGLFLVACQNTKTENNASNEANTTLTLKVGTA
                     PNYKPFNFKQDSKLTGFDTDLIEEIAKKNGIEIVWVETNFDGLIPALKSGKIDMIASA
                     MSATDERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKA
                     IKNAQVQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFS
                     FAFDKNKQKDIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(903..1541)
                     /locus_tag="ACJE1S_001021"
     CDS             complement(903..1541)
                     /locus_tag="ACJE1S_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG0806581.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1538..2527)
                     /locus_tag="ACJE1S_001022"
     CDS             complement(1538..2527)
                     /locus_tag="ACJE1S_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806582.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDRIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTYSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2531..3310)
                     /locus_tag="ACJE1S_001023"
     CDS             complement(2531..3310)
                     /locus_tag="ACJE1S_001023"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806583.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAMSNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3311..4150)
                     /locus_tag="ACJE1S_001024"
     CDS             complement(3311..4150)
                     /locus_tag="ACJE1S_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806584.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFVLAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4147..4956)
                     /locus_tag="ACJE1S_001025"
     CDS             complement(4147..4956)
                     /locus_tag="ACJE1S_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HGG0806585.1"
                     /translation="MMSKVILVVLDGLNCKSTSINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKSSFSKQISIFDLCKEQGLKAGGAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4953..6278)
                     /locus_tag="ACJE1S_001026"
     CDS             complement(4953..6278)
                     /locus_tag="ACJE1S_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HGG0806586.1"
                     /translation="MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGADFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVIENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK"
     gene            complement(6289..7335)
                     /locus_tag="ACJE1S_001027"
     CDS             complement(6289..7335)
                     /locus_tag="ACJE1S_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0806587.1"
                     /translation="MKKQFLLSLGFVALLFSNLQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGDIAVKQ
                     GVTQAFKTSYWEQVPAWAKDEEGHWLLAYTGTIAFIVNKEVVKDVPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIQAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7455..8438
                     /gene="corA"
                     /locus_tag="ACJE1S_001028"
     CDS             7455..8438
                     /gene="corA"
                     /locus_tag="ACJE1S_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015087 - cobalt ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006824 - cobalt ion transport [Evidence
                     IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HGG0806588.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSPAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLIREFKNDNEEQNSIKLRTEI
                     VTFATAKNILFTIRYNEFSTFKEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8459..9001
                     /gene="mog"
                     /locus_tag="ACJE1S_001029"
     CDS             8459..9001
                     /gene="mog"
                     /locus_tag="ACJE1S_001029"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HGG0806589.1"
                     /translation="MDIINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIAECLEPVFPAIPYCIDLIGGA
                     CIEGNDEVIQVFRPKKKCQN"
     gene            complement(8998..9183)
                     /locus_tag="ACJE1S_001030"
     CDS             complement(8998..9183)
                     /locus_tag="ACJE1S_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HGG0806590.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLVRANKF"
     gene            9312..10499
                     /locus_tag="ACJE1S_001031"
     CDS             9312..10499
                     /locus_tag="ACJE1S_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HGG0806591.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYMLIVNIAWIGFGFLYLKELLISENSRLENTLFLLAFLIITS
                     ILNLPLSIYESFVKDKAHGFSNMTLKLFIKDTIKSLILTLIFGFLILYALLFCYDFFG
                     TFWWLAAFIFAFCVIVIINVIYPTLIAPIFNKMEKLEDENLLSKINDLMKQCGFNANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALSERELLAVLGHELGHFVHKDII
                     KALINGAITMFLLFFIFAHLPDFVYQESHLEGVNGGVFALLFIFANIFSFIISPLINA
                     LSRKNEFAADQHGSKLTSKEDMKNALLALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10496..11296
                     /locus_tag="ACJE1S_001032"
     CDS             10496..11296
                     /locus_tag="ACJE1S_001032"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HemK/PrmC family methyltransferase"
                     /protein_id="HGG0806592.1"
                     /translation="MTIKNALIEAKTRLEKHENEALFILCEYLKKDRTWIFLNQDLEF
                     DSKPYFELIKRFQSGEPFEYIFEKADFWGLEFKVKKGVLIPRYDSEILLSQVLKICKN
                     NNFQNILEIGFGSGILSIVLAKELGIKITACDINPKALQLALENAKLHKVEHLIDFKL
                     CDFKQIKENYDFIFSNPPYIQNSYPIDLWVQNEPKEALFGGEKGYEILEEIITFSFER
                     KVKFLACEFGYDQKVILKQILYQKNFQAEFFQDEQGYDRAFVAQFAKK"
     gene            11338..11811
                     /locus_tag="ACJE1S_001033"
     CDS             11338..11811
                     /locus_tag="ACJE1S_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HGG0806593.1"
                     /translation="MKAINLFLLAAMIGIELILGIVVAPVIFYPANLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSIINLLFEIYSFAKEDMKFQIKFSKLMLTILILILSLVFV
                     LYFTNTIIELQNLGEQATKSQEFLSIHNASEVVIKIILLMQVFLYFLSFKIAKKC"
     gene            11845..12594
                     /gene="flaC"
                     /locus_tag="ACJE1S_001034"
     CDS             11845..12594
                     /gene="flaC"
                     /locus_tag="ACJE1S_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HGG0806594.1"
                     /translation="MMISDASMMQQNYYLNNAQKASEKALENIAAVRAISGIDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALSDS
                     QKSMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLTTSGLSID
                     NQDNITNFMDQLGALRSEIGSGINAITSNINASVQNSINTKAAENNLLNNDMAKNVND
                     FNSNYLKENAAAFVAAQSNMQLQSKIASLLQ"
     gene            12631..13263
                     /locus_tag="ACJE1S_001035"
     CDS             12631..13263
                     /locus_tag="ACJE1S_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HGG0806595.1"
                     /translation="MTLEQILEKTKNIRLVAASKYVDANIIEKLFTQGITEFGENQVQ
                     ALVQKKEILDKKDLNIKWHFIGTLQSNKINLLIKQKPILWHSCNGLKIAKAMDKRLNY
                     KLDTLLEINSANELSKSGLNPDQAIEEYLQIQEECPNLNLCGVMSIGSHSKVQREIEK
                     SFETTYKIYEKLQKHGAKICSMGMSNDFEIAIKCGSNMVRLGSILFKNLK"
     gene            complement(13280..16882)
                     /gene="dnaE"
                     /locus_tag="ACJE1S_001036"
     CDS             complement(13280..16882)
                     /gene="dnaE"
                     /locus_tag="ACJE1S_001036"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HGG0806596.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELAKTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMRSEGLKPIIGLEAYLHNHEDISDKSSRQRFHLCLYAKNEVGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEEHSEGLICSSACLQGEVNWHLNIHSERNVRFGAKGY
                     EAAKEAALWYKKVFGDDFYFEIMRHGIGDQRAIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRLRHSVHEFYVKSPAQMSELFADIPEAIENTQEIA
                     NKCNLELNLGNPTPPNFKFTREYAKEYNISLPEEGKEFSFDNDDVVFDELCKKGLEER
                     LKFVDISKHEEYKTRLEVEINIIKKMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVAYSLKITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLARGVIRDVARVCDMSIPDADELAKLIPEELKITLDAAYEKEPKIKE
                     FIERHPKGPEVWEYAKALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTLINNAIKLIKKRYNKDIIWEAIDVNDAKVYKTIQ
                     SGNTLGIFQIESGGMQNLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     KIEYPFDTLESVLEPTYGIVVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKSEFADGAEKQGYDRVKAEELWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSVNKAIREFSAVEQEDGKDAIVYG
                     LGAIKSVGIPAVENLLEARERGEFKNIDDFLSRIEPTKINKRTLESLIKAGAFDEFGY
                     TRKCLFDNMDNLTEGSKKMADARKNAASSLFGEDELTVGLQVNIVAKNEEFEVMEKLE
                     FEKEILGIYVSGHPLDRFYDKFKEIDYVKSIDFSTLKGSGEILSIGKIESFKSMMSKN
                     NKRYGRLEILDFYSTFEVTVFESNIEEIENILKNEASKNEAYGFLLSYKAEEGKLDSL
                     ALRSIKTLEELQEGEIKAVKKFNAKKNTQENKDFIAEPKEFENNIIELDLSRLNRELV
                     YEIHEIARSAHNPNEKGNKKLVLKIVSTGSCLLYHTDFVISDSVSEKIINKYAG"
     gene            complement(17082..17411)
                     /locus_tag="ACJE1S_001037"
     CDS             complement(17082..17411)
                     /locus_tag="ACJE1S_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HGG0806597.1"
                     /translation="MKVYGIKNCNSVKKALEFLDKKALEFDFIDIKKIDLGVLENWLK
                     YKRFSEIINTAGTTSKKLGLNKDKIESLSELELKNIILENPSCIKRPVIEKDNQIYIG
                     KEYEQIL"
     gene            complement(17408..18751)
                     /locus_tag="ACJE1S_001038"
     CDS             complement(17408..18751)
                     /locus_tag="ACJE1S_001038"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II 3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HGG0806598.1"
                     /translation="MTWTKNSWKNFSIKQQPIYSNQEELNKVLNKLEKLPPLVFAGEV
                     RELQSALARVCRKEAFLLQGGDCAESFANFGAVNIRDMFKILLQMAIVLTFAGGCPVV
                     KIGRMAGQFAKPRSSDYEEINGVKLPSYRGDIINGFEFNEKARIPDPNRMLEAYYQSA
                     TTLNLLRGFAKGGLANLHEVHRWNLGFLKKSELHQQYTDISEKISQALDFMEACGINT
                     YNTPSLKEVDIYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRGLDEAHV
                     HFLSGVRNPLGVKIGPNASADDVIALANALNPNNEEGRLNIIIRMGAEKIATQLPKIF
                     SKLKKEGLNLVYSIDPMHGNTVKAGDFKTREFDKIMQEVRYFFEIAMSEGVYAGGVHL
                     EMTGQDVTECTGGASNVTAQSLEKRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18775..19155)
                     /gene="uraH"
                     /locus_tag="ACJE1S_001039"
     CDS             complement(18775..19155)
                     /gene="uraH"
                     /locus_tag="ACJE1S_001039"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033971 - hydroxyisourate hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006144 - purine nucleobase metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HGG0806599.1"
                     /translation="MNIPIFLNATEYQLSTHILDINSGQPASNVKVELYNLDQNRQWV
                     KISEKFTKKNGRIADFLPYEKTENRSFGVYKLKFYTKDYYISHKVDSFYPFVEVSFEL
                     LKDQKHYHIPITLSPFGYSTYRGS"
BASE COUNT         6663 a         3335 c         2644 g         6520 t
ORIGIN      
        1 ttattttttt aattaatttt ggcaaaaaat taaaaactgg atttttttgc caattggcta
       61 gctaactttg atataatcat agagaaaatt ttactataaa ggaaaacaat gaaaaagttt
      121 ttaaccgctt tcttagttgc cttcacgggc ttatttttgg tggcttgcca aaacactaaa
      181 acagaaaata atgcaagcaa tgaagctaat actacactca ctttaaaggt tggaactgct
      241 ccaaattata aaccttttaa ttttaagcaa gattctaaac ttacgggttt tgatactgat
      301 ttgattgaag aaattgctaa aaaaaatggt attgaaattg tttgggttga aaccaatttt
      361 gatggattga ttcctgctct caaatcaggt aagattgata tgattgcttc agctatgagc
      421 gcaactgatg aaagaagaca aagtgttgat tttaccaaac cttactatat gagtaaaaat
      481 ctttatctta agctaaaaaa caacgactct cttcaaacaa aaaatgattt agaaggcaaa
      541 aaaataggag ttcaattagg aactttacaa gaaaatactg caaaagctat caaaaatgca
      601 caagtgcaaa gcaataaaga tttaaacata gctgttttag cactaaaaaa caacaaaatc
      661 gatgctattg tagctgatca agatactgct aaaggttttt tagctgaaaa tccagaattg
      721 gtaagtttct accaagaaac agatggagga gaaggcttta gttttgcttt tgataaaaat
      781 aaacaaaaag atattattga aatatttaac aaaggcatag atgaagcaaa aactgatgga
      841 ttttatgata ctttaattaa aaaatatgaa ttagaataag cgtgaatttt cacgcttata
      901 gcttaaaaag ttaaaatttc atattttctc tcttttgcaa tttttaaaat tttttcatcg
      961 ccattacata caaaggcttt gctaacagac tctagtaaag gtaaatcatt gatagaatca
     1021 ctaaaaaaat aagaatcttt catccatttt tcataatctt tacccaaata ttccttaagt
     1081 cttaaaacct tgccttcctt aaagctataa atcccataag cttttccact aaatttatca
     1141 cccacacgct cgcattttat ggctatgctt tctctcactc ccaaaaaaga ggcgattttt
     1201 ctaactaaaa attcagccgt agctgaaatt ataatacacc tttgatcttg atatttgatt
     1261 ataagttctt tagctttttc ataaggtttt atataaattt ttataaattc atctactaaa
     1321 gatgaaattc tatcttcatt tttaccctta acactttgaa gaaaaaaagt cataaattca
     1381 tccatatcaa gctttttttc ttgatattgt ttttgataaa aaacaatttt ttctaaatat
     1441 tcttgaggta aaaaaccttt ttcaacacaa aatttaagcc aaagtttagc actatcgcct
     1501 tgtattaaag tatcatctaa atcaaataaa acaagcttca ttttaactct tttgctaaag
     1561 aaagattgaa ttttaaagcg attttatcac ctgcttcata agtactataa gtgctaaaat
     1621 ttaaagtatc taccttaaat tcaatttctt gcactctaac cctatagcgt atgatattac
     1681 ctagcaatga tttttctttg atcttagcct ctaagccttc gttagaaatt tctatggttt
     1741 caggacgcaa ggctatatct tttttaaaat cgtgttttaa acccaagcta tcaagctctt
     1801 tagggcttaa aatattgtaa tttcctataa agctagccac aaaatgagat tctggcaaaa
     1861 gataaagatt gtttgcgttg gaattttgta tgattttacc ctcattcatt aaaataatcc
     1921 tatcggataa ctctaaagct tcttcttgat cgtgcgttac aaaaatagtg gtgagttcaa
     1981 gttctttttg aatttcttta atttgcaccc ttaaatgctt acgaatttta gcatcaagtg
     2041 ccgataaagg ctcatcaagc aaaagtaaat caggtttagt caccaaagat cttgctaaag
     2101 ccactctttg catttgtccg cctgaaagct tatgtggata agttttagcg tattcttcaa
     2161 gctcgacgag ttttaacatt tttttcactc ttttttctat gtccttttta tccatttttt
     2221 tgatctttaa accaaaagct acattttcaa aaacgttaag atttggaaaa agagcgtaat
     2281 tttgaaaaac catacctata tttctttttt gaggacttaa tttagtaaga tctttatcat
     2341 ttaaagaaat ttttcctcca ttaatttggc taagccctgc tatacacctt aaaagagtgg
     2401 attttccaca gccacttggg cccaaaaggg ttataaactc acccttttta gcactaaaat
     2461 taatatcttc aaaaataatt ttatccccat aagctttttt aaaattttta atctttaaat
     2521 aagccatttt ttactcctta atcaaactag ctataaaagt tgttataaaa attaacacaa
     2581 aataaactat taccaaagca ctagaataat gcccactttg atttttgata ttataaagat
     2641 aaacttgcaa agtctcataa gcacttccta caagaatatt tgcgtataaa aattcgccta
     2701 ttaaaaaaga aaaacttaaa aaaactgcca ccaaaattcc atttcttaaa ttaggcaaga
     2761 caagcttaaa aatcgctccc attaaagaac ctccaagcat agcattagat gcgatgagtt
     2821 catttaaatt gacattagac atagcattat ctaaagccct atatataaaa ggcaaagcta
     2881 tagtaaaata agtaaaaatg agtatccaag ctgtgcctcc tatattgtca gcataaagtt
     2941 gcaaaagccc cacacagcta actataggag gtacagcaaa aggcatgata ataagtatat
     3001 ttacaaaggc ttttaatttt aaaaaataat aatttagcac aaaaaccaaa ggaaaaacaa
     3061 gaatcacaga aagtaaaata ctgcccacac aaacaagcaa agaatgccaa agagcaagta
     3121 aaaatctttc gtcatgaaaa agttcttgat accatttaag cgtaagatca tcaggcaaaa
     3181 cacttacacc ccaagaagtg gaaatagaat ataaaaaagt agccattaaa ggcaaagcta
     3241 aaaacaaaaa aaccaaaaac aaaactgcat aatgataaat tttagctttt aaactcaaat
     3301 tttcattcat ttaaagcacc ttaaaattat attttttaga aaggaaattg gctataaagg
     3361 taacaacaag catgataata gttataatga tacttaaagc actagccata taaggatcaa
     3421 gattgatatc gcctgcgatt aaagcagcga ttcttacagg agcgacatta aaatttcccg
     3481 aacttaaagc ataaatagtc gcataagctc caaaagcatt ggcaaataaa atcacaaaaa
     3541 caccaaacaa agcaggagcg agcaaaggca aagctatttt taaccaatat aaaaaattgc
     3601 ctccacctaa cattttacaa gcatttaaat gtgaattttc aagactttta aaagctggaa
     3661 gcaaaagcaa gattgccaaa ggaatttgaa aatacacata aacaatattt accccgaaat
     3721 tagcataaac actaacaaaa ggctctatgc ctaaattttt caaaaacaca ttaactacac
     3781 cattgcttcc aagaactata atgaaagcaa aagctaaagg aactcctgaa aaattactta
     3841 tcatggtatt taaagaaaaa agaaatttac atatttttga tggagctaaa acaaataaag
     3901 aatagctcgc caaaagccct attaaaagtc caaaaatact agaaataaaa ctgatttgta
     3961 aagaatttat aatgctttgt agatagaatt tggactcaaa aatatgtata aaattggcta
     4021 aagaataaat ttcatcctct tctacataaa aagcattaaa aacaatccaa atcaaaggtg
     4081 ctatcataaa aaaagtaaaa actataaaaa aaggtaaaat acttaaaaat gctagaaatt
     4141 tttctttcat tttttggcct ttaaaatttc atcattatat ctcttatcgt gtttaagtcc
     4201 taaaatttca cagatactgc cacaaatttc atcctgtttt atcttggcat tttcatacga
     4261 aaaagcacta ccaaaagtga aaaaaggcac taaaatttca tcttcactta agcctccatg
     4321 acttttaccc tctgtcatac catgatcgct tgtgatgatt acattaatac cttgttctaa
     4381 ccaagtaggc aaatactcag aaatcaaatt atcaactttt ttggttttat tagcatactc
     4441 gatagagtgt gagccaaatt tatgtcctgc atcatctata ttcatagagt gtataagagt
     4501 aaaatctaga ttatatttgt ttcttaaatg ctctccatct gcaaataaat gagaatctaa
     4561 ataatcatct tcataataaa aatgtccata aggtaaagtt aaattttcat cttctatatg
     4621 gcgatgtaaa gaaggaataa attctttttt attataaagc tcaaaaaccc aatgataagc
     4681 tgcgcctcca gcttttaagc cttgttcttt gcaaaggtca aaaatgctta tttgttttga
     4741 aaaactcgat ttattattaa ttatcccact taaaacaggc tttacgcctg ttaataagca
     4801 ttcgtataaa ggacgagaca tactaggaag ttcgcattct aaagaataaa atttgcctaa
     4861 attctctttg caaagtgcat ttaaatatcc catatttata ctagtgcttt tacaatttaa
     4921 gccatcaagc acaactaaaa taactttgga catcatttac tctttaaaaa atcttttact
     4981 tcaagcaaaa taaactcatt atcatcagtc ttattaggtt ctctacttga agaataagga
     5041 aagttattgt cattttctat aactatatga gagtcatcta ctatatccac accttctatg
     5101 gtttcaaaag gaaaaacaaa tttatcattt accaaaggct ttttagaaat tttatttcta
     5161 tccttaatat ttaaaagatc tatataagaa attttttgag cttcatgagt tttatcatct
     5221 aatttaacct tataaattct tttaaattga gctacattat taaaacaatg cttagtatct
     5281 tcaccttctt tgcaagcctt atctttagtg ccttcttttt gatctctttc tatgatgatg
     5341 ccgtatttat catctatcat attaaaatca cctatggaat ggcttttatc ttctaagaaa
     5401 tatttataag tttttccagt gaatttttta ttttttacat caaattctat gattcttaga
     5461 tattctttac ctttttcatt ctcataagcg ttgttattat aaatgcttcc ttctaaaagc
     5521 aaataaagtt tagaaccatc tttagagctt gccatagctt caaagccttt agaacgcttg
     5581 atattaaatt tctcattttc tccatcaggc ttatcgctaa attttaaact tggattatca
     5641 ggagaaataa gttttttacc ctccacatac acatcaaaaa cttctttcaa attcccattc
     5701 ttatcaaaat gaagcaaata aggaccaaat tcatcaccta tataaaattc atcattgata
     5761 acctgtatac tctcagtatc aaaatcagcc ccacttaaat acctttcttt ggttgtttcg
     5821 gtggttatag gataggggta ttttttatca ctatctttaa aaaaaactgt ttttaaaagt
     5881 tcgtattttg agtttttaaa atcaaattta aactcgtgag cataaagcat ggcatcataa
     5941 gaattatact ttttacccaa gccattatcg ctaattaccc aaaaaacatc tttttttgga
     6001 atatatttta tcccactatg tccttgtata ggttgatttt taaaaggtaa ataaaaatct
     6061 gtttccctgt ttcccttaga tttaaaagtt ccaatttttt cttctctagt gatatttgca
     6121 aatttcccat aagttttaaa aaaatcagga gcatccttag gaggttttac tgtactttta
     6181 gaatctatga taatatgccc tgctaaattg gcctcatact cttgaactcc aaataaaaca
     6241 ctgcaaagca tagcacttgt taaaataacc tttttcatcc aatctccttt atttcatatc
     6301 cactataact ttttcttgcc aaagttgtgg caattcttta gcgctttttt cccaagcttt
     6361 ttgatctttg attgctcttg catttttgta ttgctcactt ggtaaaagtt tagcttgtat
     6421 atcatctggc aaggtaatat gatcaattct tattggcctt gcataacctt ttgctagatt
     6481 gatttgtcct ttatcagaaa gtataaactc acgggctaat ttagccgcat ttggatgttt
     6541 tgcgtattta ttgataatag ttgtataacc cgaaataaca ctaccatcag cagggattaa
     6601 aacttcataa cgatctttgc ccactttatc tctatagcct aaaccattaa aatcccaaac
     6661 taaacccact tcaacttcac ctttttcaag attggctata cttacatcat tatttacaag
     6721 tcttccttgt ttggctaaag tattaaaaaa agctaaagca ggacttaaat ctttttcatc
     6781 cccacctaag gcataattag ctgccaaaac tgcactcaca gcttgagccg ctacacttac
     6841 atcacctacg gtaattttat aatttccctt aagcaaatct tgccaagttt ttggcacatc
     6901 ctttactact tctttattaa cgataaaagc tatagtgccc gtataagcca aaagccagtg
     6961 tccttcctca tcttttgccc aagcaggaac ttgctcccaa tagcttgttt taaaggcttg
     7021 agttactcct tgctttacag ctatatctcc aaaagaggct cctacatctc ctatatcacc
     7081 gcttgcattt ttcttttcag ccttaaattt agcaatttct tgagctgaac tcatgtctgt
     7141 atcgctgtgt tctataccat aaagattttt aagatctgcc caagtatctt tccaatttgc
     7201 ccaagtatca ggcatggcta gagaatttac cctaccctct gcttgtgcag ctttgattaa
     7261 attctcatct atggcttgta aatttgaaaa cagcaaggct acaaacccta aacttaataa
     7321 aaattgcttt ttcattttta actccttaaa ataaaaatat tttagaaatt taataagttt
     7381 tagaaacatt ttagatacaa gttgattttt aactaatcaa agttataatt tcaaagtcaa
     7441 aataaggaac cactatgctt tatatttata taaaaacaca aaatgcctta gtacagagaa
     7501 ttaattttaa tctcgatagt caagaactac cgcaaaatat cttatggatt gatttacttc
     7561 atccaagccc tgcagagatt gcctttatat cgagtgaatt taatcttgaa tttccaacga
     7621 aagaagaaag agaagagata gaacttagtg caaaatactg ggaagataat gctactataa
     7681 ccatcaatgc tcattttttg attcgagaat ttaagaatga taatgaagag caaaattcaa
     7741 tcaaacttcg tacagaaatt gtaacttttg caacagctaa aaatatttta tttacgataa
     7801 gatacaatga atttagcacc tttaaggaaa ttcaagcaag gattttagct agtccgaaga
     7861 attttgaaga tggttttgat attattgata aaatgtttga agtacgcgtt gaaaaagatg
     7921 cggatttact agaatggata gataaagaag caagacgctt aagaacaagt gttttagaaa
     7981 aaaaagatga atatagttat gatgaaatgc taaaggatat ttcaagtttg caagagctta
     8041 atatgcgcgt aagagattct ttgtttgata agcgtcgcgc tatgacttct ttgctaaaaa
     8101 gcgataaaat cgataaagat ataaaacaaa atctcactat agttttaaaa gacttaaatt
     8161 ctttggttga atttagcgtt tcgcaactta atatcttaga taatatccaa accattttag
     8221 ccagccaaat caacatagaa caaaacaaaa tcattaaaat tttcaccgtt gcaactgttg
     8281 ccatgatgcc acctacttta ataggaactg tttatggtat gaattttaaa ttcatgcccg
     8341 aacttgaact tcactatgct tatcccatag tgcttggcgt gatggtaatt tctatcattt
     8401 tacctttggt tgttttcaag aaaaaaggat ggttataaaa atttattaag gagaaacaat
     8461 ggatataata aacataggaa ttttaaccct aagcgataga gcaagtagtg gtatatacga
     8521 agataaagcc actgctgaaa ttgaaagagt gttaaattca tatataaaaa atgatattat
     8581 ttatcataaa gaattaatcc ctgatgatta tgatttgatc attaaaaaat tactttatct
     8641 agcagatgaa aaaaaatgcg atttgattgt tacaagcgga ggtacaggtc cagcacttcg
     8701 tgatgtaacc ccagaagcca cggaagccgt gtgtgataaa atgatgccag gttttggaga
     8761 acttatgcgc ttagaaagtt taaaatatgt cccaacagct atactttcaa gacagagtgc
     8821 aggaattcgc aataaatctt ttatcatcaa tctacctggc aatcctaaag ccatagcaga
     8881 atgtctagag cctgtatttc ctgcaatacc ttattgtatt gatttaatag gtggagcttg
     8941 tatagaggga aatgatgaag taattcaagt ttttagacct aagaaaaaat gtcaaaatta
     9001 aaatttatta gccctaacaa gtctgcttaa ttgtctagca agcagacttg ccgaagcttc
     9061 atctttgctt atcttttgta ctttattttt aaacttacaa agcctgtcat ctaaaatcac
     9121 atcattgatt ggaattttag gcttttcttt ttgcttttgt gaaatctttt tcttaaaaaa
     9181 cattctttaa tcctttttta taaatataca ccaacttagt tgaaaagaat attattttag
     9241 attttaaact attaacttta tttcattatt ttaagctaga attcgcaaaa aataaatcaa
     9301 ggaaaaaata aatgacttta attgcaattt tatgtcttta cacagcactt ttatcttgga
     9361 tttcctatgc tcaaattcgt ttcttagaaa gagaaaaaga caaacaagct caaattttaa
     9421 gcgaaaaaga ctatcaaaac gcagccgata ttgctataga aaatgaaaaa ttcaagcttt
     9481 tttcaaattt ttatatgctg attgttaata tcgcatggat aggttttgga tttctttact
     9541 taaaagaact attaatcagc gaaaactctc gccttgaaaa tactctattt ttacttgctt
     9601 ttttaattat cacaagtatt ttaaatttgc ctctaagcat ttatgaaagc tttgttaaag
     9661 ataaggctca tggtttttca aatatgactt taaaactttt tatcaaagac actataaaaa
     9721 gccttatttt aactttgatt tttggatttt taatccttta tgccctactt ttttgctatg
     9781 atttttttgg tactttttgg tggcttgcgg cctttatttt tgctttttgt gtgatagtga
     9841 tcataaatgt tatttatcct actctaatcg ctcctatatt taacaaaatg gaaaaattag
     9901 aagatgaaaa tttgctaagt aaaatcaatg atctaatgaa acaatgtggc tttaatgcga
     9961 atggggttta tgtgattgat gctagtaaaa gagataagcg tttaaatgct tattttggtg
    10021 ggctttttaa aagcaaaaga gtggtgcttt ttgacacact tttaaaagcc ttaagcgaaa
    10081 gagagcttct agcagtttta gggcacgaac ttggacattt tgttcacaaa gatataataa
    10141 aagccctaat caatggggca atcactatgt ttttactttt ctttattttt gcccatttgc
    10201 ctgattttgt atatcaagaa agccatctag aaggagttaa tgggggtgtt tttgctcttt
    10261 tgtttatatt tgcaaatatt tttagtttta tcatctctcc tttaataaat gccttaagta
    10321 gaaaaaatga atttgcagca gatcaacacg gaagcaaact tacaagcaag gaagatatga
    10381 agaatgcact cttagctcta gcaagagaaa ataaagcttt tattaaaaca agcaagattt
    10441 ataccttttt ttatcttagt catccaagca ttagtgatag aatcaaggct ctttcttgac
    10501 cataaaaaac gctcttatag aagctaaaac tagacttgaa aaacacgaaa atgaagcctt
    10561 atttatactt tgtgaatatc taaaaaaaga taggacttgg atttttttaa atcaagatct
    10621 agaatttgat tccaagccct attttgaact tatcaaacgc tttcaatcag gggaaccttt
    10681 tgaatacatc tttgaaaaag cagatttttg gggcttggaa tttaaagtaa aaaaaggggt
    10741 tttaatccca cgctatgata gcgaaatttt actttcacaa gttcttaaaa tttgcaaaaa
    10801 taataatttt caaaatatat tagaaatagg ctttggaagc ggaattttaa gtatagtttt
    10861 agctaaagaa ttgggaataa aaattacagc ttgtgatatc aaccccaaag ctttacaatt
    10921 agccttagaa aatgctaaat tacacaaagt tgaacattta atcgacttta aactttgtga
    10981 ttttaaacaa ataaaagaaa attatgattt tattttttca aatcctccct atatccaaaa
    11041 ttcatacccc atagatcttt gggtacaaaa cgaaccaaaa gaagccctat ttggaggaga
    11101 aaaaggatat gaaattttag aagaaattat aactttctcc tttgaaagaa aggttaaatt
    11161 tttagcatgc gaatttggct atgatcaaaa agtaatttta aaacaaattt tatatcaaaa
    11221 aaattttcaa gctgaatttt ttcaagatga acaaggatat gatcgtgctt ttgtcgctca
    11281 atttgctaaa aaataagctt tgtatgatat gataagttaa aaaattaagg agaaaaattg
    11341 aaagcaatca atctattttt acttgcagct atgattggca tagagcttat acttggcata
    11401 gttgttgcac cagtaatttt ttacccagct aaccttatag gcgagggagt tttaagtcat
    11461 tttcaaagtg gcttaatgat gactcaaatt ttcattaaaa tgggatattt gttaattttt
    11521 gtttctatta ttaatttatt atttgaaatc tattcttttg caaaagaaga tatgaaattt
    11581 cagattaaat tctcaaaatt aatgcttact atactcattt taattttgag cttagtgttt
    11641 gttttgtatt ttacaaatac cattattgaa cttcaaaatt tgggcgaaca agctacaaaa
    11701 agccaagaat ttcttagtat acataatgca agcgaagtgg ttataaaaat tattttatta
    11761 atgcaagttt ttctatattt cttaagcttt aaaatagcaa aaaaatgcta aaatccaata
    11821 aaaatttata aggaggagta ggctatgatg atctctgatg caagcatgat gcaacaaaat
    11881 tattatttaa ataatgctca aaaagctagt gaaaaagctt tagaaaacat tgcagctgtc
    11941 cgtgcgataa gtgggattga tagtgctaat ttagctattg ctgattcttt aagatctcaa
    12001 tcaagcacta tagatcaagg tgtcgcaaat gcctatgatg ctattggtgt tttacaaatt
    12061 gcagatgcaa gcctgacaaa tatttctcaa agtgctgata gacttaatga actctccgta
    12121 aagatgaata atgcagcatt aagtgattct caaaaaagca tgctaagaac agaagcaaca
    12181 cgcatacaag agtccatcaa tgattctttt aataatgcta cctataatgg aaaaaatgta
    12241 ttccaaacta tgaattttgt agtaggaagt ggaactgaaa cgaccaattt aaatccattg
    12301 acaactagtg gtcttagcat agataatcaa gacaatatta caaattttat ggatcaactt
    12361 ggtgctttaa gaagtgaaat aggatcgggt atcaatgcca tcacttctaa tatcaatgct
    12421 agtgtgcaaa atagcatcaa tactaaagca gctgaaaata atttgctgaa taatgatatg
    12481 gcaaaaaacg tcaatgattt taatagcaat tacctaaaag aaaatgcagc tgctttcgtc
    12541 gctgcacaat ctaacatgca acttcaaagc aaaattgcta gcttattaca atgataaaag
    12601 ccctaatcta gggcttctct ttttataaaa atgactttag aacaaatttt agaaaaaacc
    12661 aaaaatatcc gtcttgtagc agcaagcaaa tatgttgatg caaatattat cgaaaaactt
    12721 tttactcaag gaattacaga atttggagaa aatcaagttc aagccctagt acaaaaaaaa
    12781 gaaattcttg ataaaaaaga tttaaatata aaatggcatt ttataggaac gctacaaagc
    12841 aataaaatca atcttttaat caagcaaaaa ccaatactct ggcattcttg taatggatta
    12901 aaaatagcaa aagccatgga taaaagacta aattataaac tagatacctt actagaaatc
    12961 aatagtgcca atgaactcag caaaagcgga cttaatccgg atcaagctat agaagaatat
    13021 ttacaaattc aagaagaatg tcctaattta aatctttgtg gagttatgag cataggttca
    13081 cacagcaaag ttcaaagaga aattgaaaaa agttttgaaa caacctataa aatctatgaa
    13141 aaacttcaaa aacacggagc taaaatttgc tccatgggga tgagtaatga ctttgaaatc
    13201 gccattaagt gtggatctaa tatggtaagg cttggaagta ttttatttaa aaatttaaaa
    13261 taaaatctcc cctaatcctt taccctgcat atttattgat aattttttca ctaacactat
    13321 cagaaataac aaaatcagta tgataaagca agcaagaacc agtgctaacg atctttaaga
    13381 caagcttttt attgcctttt tcatttggat tatgtgcact tcttgctatt tcgtgaattt
    13441 cataaacaag ctctcgattt aatcttgaaa gatcaagttc tataatattg ttttcaaatt
    13501 ctttaggctc tgctataaaa tctttatttt cttgagtatt tttcttggcg ttaaattttt
    13561 ttaccgcctt aatctctcct tcttgaagct cctctagagt tttaattgat cttaaagcca
    13621 agctatctaa tttgccctcc tctgctttat agcttaataa aaatccataa gcctcatttt
    13681 tagaggcttc attttttaaa atattttcaa tctcttctat attagactca aaaaccgtca
    13741 cttcaaaagt agaataaaaa tccaatatct caagcctgcc ataacgctta ttatttttac
    13801 tcatcataga tttaaagctt tcaatctttc ctatacttaa aatttctcca ctgcctttaa
    13861 gtgttgaaaa atctatactt tttacataat ctatttcctt aaatttatca taaaaacgat
    13921 cgagtgggtg tcctgaaaca taaattccca aaatctcttt ttcaaattca agtttttcca
    13981 taacctcaaa ttcttcattc ttagccacta tattaacttg caaaccaaca gttaattcat
    14041 cttctccaaa aagagaactt gctgcatttt ttcttgcatc ggccattttt ttagagcctt
    14101 cggttaaatt gtccatatta tcaaacaagc actttctcgt atagccaaat tcatcaaaag
    14161 cacccgcttt gataagactt tctagggttc ttttgttgat ctttgtaggc tctatcctgc
    14221 ttaaaaaatc atcaatattt ttaaattcgc ctcgctctct tgcttcgagt aaattttcaa
    14281 ctgcaggaat tcccacactt ttaatagctc caagtccata aacaatagca tctttaccat
    14341 cttcttgctc tactgcacta aattcgcgta tggctttatt aacagaaggt ggaagaagtt
    14401 tgatattcat ttttttcatt tcatcgatat aaacagcgat tttatcgaca ttattttctt
    14461 cacttgttag caatgctgcc ataaattcac taggatagta ggtttttaag tacgctgttt
    14521 gaaaagtgat caaggcataa gccgcagagt gagatttgtt aaaaccatat cctgcaaatt
    14581 taacaatcaa ttcccaaagc tcttcggctt ttactctatc ataaccctgc ttttcagcac
    14641 catcagcaaa ttcacttttt aattttttca ttttttcagg atcttttttg cccatagcgc
    14701 ggcgcaccac atcagcacca cctagtgaaa atcctcctat aatctgaaca atttgcataa
    14761 cttgctcttg atagacaaca atcccgtatg taggctctaa tacactttca agagtatcaa
    14821 atggatattc tatcttttta agcccatgtt tcctatctat aaaatcatca agcattcctg
    14881 attccatagg acctgggcga taaagagcaa gaaccgcgat aatatcttca aaacgctcag
    14941 gctttaatct tgcatttaag ttttgcattc cgcctgattc tatttgaaat attcctaagg
    15001 tattcccact ctgtatggtt ttataaactt tagcatcgtt tacatcgata gcttcccaga
    15061 ttatgtcttt attgtaacgc tttttaatga gtttaatagc attgttgatc aaagttaagg
    15121 tttttaaacc caagaaatca aatttgatta agtctacatc ctctaaatga tctttagagt
    15181 attgtgtaac taaatgtctt tcatcgtttt tactctgtct aaaaagagga gtttttttcc
    15241 ataaactttc attagaaatc acaacacctg ctgcgtgcat acctgcattt ctattgagtc
    15301 cttcaagagc cttagcatac tcccaaactt caggaccctt tgggtgacgc tctataaatt
    15361 ctttaatctt tggttctttt tcgtaagctg catcaagagt gattttaagt tcttcaggta
    15421 taagcttggc aagttcatct gcatcaggaa tactcatatc acaaaccctt gccacatcac
    15481 gaatcactcc acgagccaaa agcttaccaa aagtaataac ctgtgcaacc ttatcggctc
    15541 cgtatttatc aatcacataa tcaatcactt ctgcgcgtct atcttgacaa aaatccacat
    15601 caatatcggg catcgatacg cgttctggat ttaaaaaacg ctcaaaaagc aaactataag
    15661 gaataggatc taaatccgtg attttcaaag aataagcgac caaactaccc gcagctgaac
    15721 cccttccagg acctacagga attcctttat ctttagccac tttgataaaa tcatgaacga
    15781 ttagcatata gcctgaaaat ttcatttttt ttatgatatt gatttcgact tcgagccttg
    15841 ttttatattc ttcatgcttg cttatatcaa cgaattttag cctttcctca agtccttttt
    15901 tgcaaagctc atcaaaaacc acatcatcat tatcaaaact aaattcttta ccctcttcgg
    15961 gcaagcttat attatattct tttgcatatt ctcttgtgaa tttaaaattt ggcggagtgg
    16021 gatttcctaa atttagctct aaattacatt tattagcaat ttcttgagta ttttcaatag
    16081 cttcaggtat atcagcaaaa agctcgctca tttgcgctgg agatttgaca taaaattcat
    16141 gaacactatg gcgtaaacga tcaggatcat tcagcttttt gcccatagca atacacataa
    16201 atacttcatg ggcagccgct ctttccttaa aagtataatg ggtatcattt gtagcaataa
    16261 ttttaatatt caattctttt gagagtctta taatatcatc gtctatggct ctttgatctc
    16321 ctataccatg acgcataatt tcaaaataaa aatcatcgcc aaaaactttt ttataccata
    16381 aagccgcttc cttagccgct tcataaccct tggctccaaa acgaacattt ctttcactat
    16441 gaatatttaa atgccaattt acctcacctt gcaagcaagc cgaagaacag ataagccctt
    16501 cgctatgctc ttccaaaagc tttttattga tgcgtggata ataatacaaa cccttgatat
    16561 agctttgaga acttagatac attaaatttt gataaccaac ctcatttttt gcatataagc
    16621 aaagatgaaa tctttgacgc gagcttttat ctgaaatatc ttcatgatta tgcaaatacg
    16681 cttcaagacc tatgatgggt tttaatccct cagagcgcat agtctgataa aaatcaattg
    16741 ctccaaacat attaccatga tctgtcatgg ctacacttgt agcaccctgc tctttaaggg
    16801 ttttagctaa ttccttaagc ttattggctc catcaagtaa agaatattct gtatgcaaat
    16861 gaagatgggt aaattggctc atcgtcttcc ttgaaaatat aaatactaaa gattttgata
    16921 aaaattataa atttttattg ctgaatttga aagaatttat cactaaaaat tacctgaaat
    16981 ttatcatgat aattttatca ccatcagcaa atatatttta aaaaataaaa tggtaaaagt
    17041 ttttaagatt gaaagaatga atcatctttc aagagataaa atcacaaaat ttgttcatat
    17101 tctttgccaa tataaatttg gttatccttt tctataacag ggcgtttaat acaacttgga
    17161 ttttctaaaa taatattttt caactcaagc tcgcttaagc tctctatctt gtctttattc
    17221 aaaccgagtt tttttgaagt agtgcctgca gtattgataa tttcactaaa tcttttatat
    17281 ttaagccagt tttcaagcac gcccaaatca atctttttaa tatcaataaa atcaaattct
    17341 agagcttttt tatctaaaaa ctctagagct ttttttacgg aattacagtt tttaatccca
    17401 tagactttca ttttcttgcc tttttaacca aatcagcaat caaaaacgca agctcaagtg
    17461 cctgatctgc attaagtctt ggatcacact gtgtctcata gcgtttttct aaactttgcg
    17521 cagtaacatt actcgcacca cccgtacatt cggttacatc ctgtcctgtc atttcaagat
    17581 gaactccacc tgcatataca ccttcgctca tagctatttc aaagaaatat cttacttctt
    17641 gcatgatttt atcaaattca cgcgttttaa aatcccctgc ttttaccgta ttaccatgca
    17701 taggatctat actataaact aaatttaatc cctctttttt aagtttagag aaaattttag
    17761 gcaattgagt tgctattttt tcagcaccca tcctaatgat gatatttaat ctaccctctt
    17821 cattgtttgg atttaaagca ttagctaaag cgatcacatc atcagcactt gcatttgggc
    17881 ctatttttac tcctaaagga tttctaactc cacttaaaaa gtgtacatga gcttcatcaa
    17941 gacccctagt tctctcacct atccaaagca tatgagctga acaatcataa atttcaccac
    18001 ttaagctatc cactctagtt aaagcttcct cgtaaggcaa aagcaaagct tcatgagaag
    18061 tatagatatc aacttctttt aagcttggag tattataggt attaatacca caggcctcca
    18121 taaaatctaa ggcctgagaa attttctcac tgatatcggt gtattgttga tgcagctcgc
    18181 tttttttcaa aaaacctaaa ttccatcgat gcacctcgtg taaattagct aatccccctt
    18241 tagcaaaacc gcgcaataaa tttaaagtag tagcactttg atagtaagct tcaagcattc
    18301 tatttggatc aggaattcta gctttttcat taaattcaaa gccattaatg atatcacctc
    18361 tataacttgg aagctttact ccatttatct cttcataatc gctacttctt ggcttagcaa
    18421 attgccccgc catacgacca attttaacaa cgggacaacc acccgcaaaa gttaaaacta
    18481 tagccatttg aagtaaaatt ttaaacatat ctcgtatatt tactgctcca aaatttgcaa
    18541 aactttctgc acaatctcca ccctgaagta aaaaagcttc ttttcggcat actcttgcta
    18601 aagcactttg aagctctctt acttcacctg caaaaaccaa aggaggaagt ttttcaagtt
    18661 tatttaagac tttatttagc tcctcttgat tagaataaat aggctgctgc ttaatagaaa
    18721 aatttttcca agaattttta gtccaagtca tcgttatttc ctaaagatat aattttaact
    18781 tcccctatag gttgagtaac caaaaggaga taaggtaata ggtatatgat aatgtttttg
    18841 atcttttaaa agttcaaaac ttacttctac aaaggggtaa aaactatcaa ctttatgtga
    18901 tatataataa tctttggtat aaaatttgag tttataaact ccaaaagaac gattttctgt
    18961 tttttcatag ggaagaaaat ctgctatcct accattcttt tttgtaaatt tttcacttat
    19021 cttgacccat tgtcgatttt gatccaagtt ataaagctct acttttacat tagatgcagg
    19081 ttggccagag ttaatgtcta aaatatgggt acttaactga tattcagttg catttagaaa
    19141 tattggtatg tttatgagag cc
//
LOCUS       DBBXOW010000032        19073 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.033, whole genome shotgun sequence.
ACCESSION   DBBXOW010000032 DBBXOW010000000
VERSION     DBBXOW010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19073
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.033"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..993)
                     /locus_tag="ACJE1S_001040"
     CDS             complement(<1..993)
                     /locus_tag="ACJE1S_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HGG0806600.1"
                     /translation="MNENILKSLDSSEKETLQKGLQSLIEQTYIVENEYKILNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKKPKLLDIISLEKNRDELEFENRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFSR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINANEFNLLELTEECESAINSYNY
                     SSQIDFEIKFLDMKIYGDKALLSLVLQNLIYNAIDAIEESECENPKIKIQASCDEQNL
                     YIRVYDNGCEIKDENAVFEAFKTTKLKGNGLGLSLSKEIINTHKGELKFEIWPKN"
     gene            complement(990..1874)
                     /locus_tag="ACJE1S_001041"
     CDS             complement(990..1874)
                     /locus_tag="ACJE1S_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF234 domain-containing protein"
                     /protein_id="HGG0806601.1"
                     /translation="MLLKRKNINFNHFAKFCNTSALAKIFDFYSVFEGFESLDSLNFE
                     EDVFENIEYLLLKNYLHIKDYFKLDETASYALSLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLRAGIIKLEHSKEAKRIKDKRQKLKKELRSYVIQDKIIFANHFTRFFFYFLKPNE
                     KLILQNHYEEVLGLIKEKFELYQSFCFEQLSRELLEKKFQVSGVQSYWDKNLELDLYY
                     KDDEISFIGEVKFKNKKICRNILNLLESKAKSLKLEPNNYIIISKNGFSKEFYKICKQ
                     DLLLLDLNDFKILLEEDK"
     gene            1909..3183
                     /locus_tag="ACJE1S_001042"
     CDS             1909..3183
                     /locus_tag="ACJE1S_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HGG0806602.1"
                     /translation="MCLQISDLKKEIILKKGTLHFDFTASALALKCVEKEIAKILPSY
                     ANTHSDSSLNSFKTQQIYEQARKDIKTSLDLSDEFALIACGSGSSSAIKKFQELLGIY
                     IPPLIKEKYFDKVDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKKGNIDFEIL
                     EKVLKENQHRKIIASFSLASNVTGILSDYKRISKLVRKFKGIVAFDASSFIPYKNIAC
                     KYYDALFISSHKLIGGIGGSGLLAIKKELCGSKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDEIGIEEIEKKEEILKEYFFEKLKTIPHLILYANNI
                     KTRLPIFAFNIKNISPFDLAYELSKKYHIETRAGCACAGPYGHDLLGLKDNEELKTKP
                     GWLRISLHYTHEKEDIDYFFEALQKSIAKLKF"
     gene            complement(3187..3263)
                     /locus_tag="ACJE1S_001043"
     tRNA            complement(3187..3263)
                     /locus_tag="ACJE1S_001043"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3227..3229),aa:Asp,seq:gtc)
     gene            complement(3285..3360)
                     /locus_tag="ACJE1S_001044"
     tRNA            complement(3285..3360)
                     /locus_tag="ACJE1S_001044"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3325..3327),aa:Val,seq:tac)
     gene            complement(3369..3444)
                     /locus_tag="ACJE1S_001045"
     tRNA            complement(3369..3444)
                     /locus_tag="ACJE1S_001045"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3409..3411),aa:Arg,seq:tct)
     gene            complement(3458..3533)
                     /locus_tag="ACJE1S_001046"
     tRNA            complement(3458..3533)
                     /locus_tag="ACJE1S_001046"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3498..3500),aa:Lys,seq:ttt)
     gene            complement(3537..3613)
                     /locus_tag="ACJE1S_001047"
     tRNA            complement(3537..3613)
                     /locus_tag="ACJE1S_001047"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3577..3579),aa:Asp,seq:gtc)
     gene            complement(3635..3710)
                     /locus_tag="ACJE1S_001048"
     tRNA            complement(3635..3710)
                     /locus_tag="ACJE1S_001048"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3675..3677),aa:Val,seq:tac)
     gene            complement(3723..3798)
                     /locus_tag="ACJE1S_001049"
     tRNA            complement(3723..3798)
                     /locus_tag="ACJE1S_001049"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3763..3765),aa:Lys,seq:ttt)
     gene            complement(3860..4645)
                     /locus_tag="ACJE1S_001050"
     CDS             complement(3860..4645)
                     /locus_tag="ACJE1S_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0806603.1"
                     /translation="MSLFIQKCKNFKFQAPLSKKTIFFNSLVLIFILSLFFYFSFSVS
                     AYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIVICFFSLSKIIILRFFATL
                     YVELIRGTPLLVQVLLVFYIIANSLGFDDRYIVGIFILSMFSAAYLSEIFRAGILSVP
                     IIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLANLIKDSSLLSVIALNELTQ
                     SIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERKYQK"
     gene            4769..5146
                     /locus_tag="ACJE1S_001051"
     CDS             4769..5146
                     /locus_tag="ACJE1S_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806604.1"
                     /translation="MLILGHYLLTQNSNFCFIDESKKLKKDQISCFLYNEEIIQNAKN
                     ENLDFAVLIQDKNEIFLSNALGAKFLLFDDENLARFASEVAEFYLFDSKILLLVENLH
                     KLEKAYELRLDGVILKSLIQDYH"
     gene            complement(5155..6273)
                     /locus_tag="ACJE1S_001052"
     CDS             complement(5155..6273)
                     /locus_tag="ACJE1S_001052"
                     /inference="COORDINATES: protein motif:HMM:NF017893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane CreD family protein"
                     /protein_id="HGG0806605.1"
                     /translation="MEQKFDENKFMQEYARNQRLKSLTLKGVLIFIISIVLLIPLLML
                     KTLVEDRKYNAQNVISLMGKAWGSDEFYTPSLNEKILPNKLELWVDLKYQERIKGIYK
                     IPLYTAFVDFNASFNMENLSNFDENSIQFSNGNLKDLQFNILKDVLWVSGTLQLKGYG
                     SFDANMQAKENIIHINSNATNPSFEYALPNDYSIDKKGFSAFYEFQNSISNDRVEKRR
                     LSVEFYQGVDEYRLIDRMIKYGYLFIILTFLVLFLCELASKKNVILLQYAILGASLIV
                     FYLMLLSFSERIGFNFAYLFSSLAIIIPLSLYTLSIMGQKRFAIVMATILFILYLCLF
                     IMLKQDEYALLIGTFIAMFGIYAAMYFTRNLNKDYHQG"
     gene            complement(6283..7488)
                     /locus_tag="ACJE1S_001053"
     CDS             complement(6283..7488)
                     /locus_tag="ACJE1S_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806606.1"
                     /translation="MKKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITIVPKFYSPMDDDLVTELKREFPHLLFSPYISTQVV
                     AKADNRFEGGVLFGVNFNDEVKINEVVAKALKDENLSGFDILVGSVLADELNLHKNDK
                     LSLIFSNLSPSGFSLVPQAKRFDVKARFASGLIFYDKAYMYTDVNALRKVLGISNQQS
                     YDGVHVYSENAFKDVEKLKSYLKSDYAVVGWWEQNQNFFSALKLEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRTEIALLLALGASKLEVKKSFFALGMLIGGGGMIIGIILAF
                     FALWLLGNFDIVTLPADVYGTSKLPLDLSVMDFSLTLVGALIIIALSSYYPAKKATQI
                     NVLDTLRNE"
     gene            complement(7485..10073)
                     /gene="secA"
                     /locus_tag="ACJE1S_001054"
     CDS             complement(7485..10073)
                     /gene="secA"
                     /locus_tag="ACJE1S_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HGG0806607.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYLKRVAQINALESKYQNLSDDELK
                     AEFGKFKEQILSGEKKESDILNDVFAIVREVGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVILS
                     SQNSDLEHKKAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHHFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQRGEAVLPPAKPEGDFIVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYEKLAGMTGTAQTEA
                     TEFSQIYSLDVVSIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKNIMDRLGIQEGEHIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDEEYDIKTKISQNIAEYSAYVMNDFMIEESGADLNFENLKAKILDECSIE
                     LKQSDFENLSLIEMQEKLSEILEKSYDEKMSKLDSKQLHHIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVKFNQEEAQ
                     NLEEKANQENEALFEKSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            10182..10691
                     /gene="lolA"
                     /locus_tag="ACJE1S_001055"
     CDS             10182..10691
                     /gene="lolA"
                     /locus_tag="ACJE1S_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LolA-like outer membrane lipoprotein chaperone"
                     /protein_id="HGG0806608.1"
                     /translation="MKKIFCLFFFFLSHILAIDLNFNTYSSNFTQSVKSKDSTLSYSG
                     HFILSQEQAYWSYDTPSKKEIYINKNQIILVEHDLEQVVFSHLDNIPNLNEIFKKAKH
                     LNDNQLIAKYENINYTITLKDNEIQSIAYKDEFENDILITLNHQIKNPTINPEVFKPK
                     FPNYYDMVR"
     gene            complement(10694..11392)
                     /locus_tag="ACJE1S_001056"
     CDS             complement(10694..11392)
                     /locus_tag="ACJE1S_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806609.1"
                     /translation="MKKIFLLAFLSLSLNAQSLELDKIRTDLYSKSGANVLKKIEISL
                     EFEGEKLKENENKLTDAVNTVISGFFYEDIFTELGKNNFKKTLEKFIDKKYKIKINEI
                     YILSLSGVEKFDLEEFKRFLASTEAKEKNVGSEVKKALDNLELPQTPTVPNISNIETP
                     QIDQLFQDDNTQNQYDNGEIDINTLNIPKMTSDIEEKIKRDLIANPPQIFKENNSSEE
                     KGFELNLDTNLTMP"
     gene            complement(11403..12746)
                     /locus_tag="ACJE1S_001057"
     CDS             complement(11403..12746)
                     /locus_tag="ACJE1S_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HGG0806610.1"
                     /translation="MLDKLEKFLVYDNVFLSGGAGVGKSFLTNELIRSYKRQGKVVIA
                     LGSSALSAFNIAGATLHSFFCLGYCQDMDTLSVFDRNQKQREKILKLKENLKKIDLII
                     IDEISMVSADIFEMIGFRLKNSQFDGKILVVGDFFQLPPVIKEKKENLFLNSTYAFSS
                     FFWKELKFKNIKLTQPKRTHNLEFYGNLSLIRQGFLDDKILNFFENLCINTKELEELD
                     DDYTLLCSINKKVNAVNDDRLSKLESPLVCFKAEICKESKDIDEHKIQTWIKSLNILD
                     ELKLKIGARVIFCVNNWDKGYYNGEQGIIESITYEEDKTYIGIMKNNGIKIMLEPYVF
                     FMEELEQNNNEMFINVLASVSQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRAINPATLKIYFTKRINFKAYFASILKFDISVREFYQNNDFLDLELENNII"
     gene            12795..14159
                     /locus_tag="ACJE1S_001058"
     CDS             12795..14159
                     /locus_tag="ACJE1S_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HGG0806611.1"
                     /translation="MKIWLYPCLTALFFTACSIKETKLSPTPSQTILNFKDQQDSHYA
                     KLEFDQNISILSKMNQNINFDSQKYKQLFFSPWHSSFKTLKNQNLFWSFSLYTNPKNT
                     YYFFNKQVIPLSWFEKTIDNANTKELGKFDKKALVIQNTLIKNIPTQRAILKNPFLEN
                     EGIPFDYASDSILNAGTPILVSHFSKDKRYAFVLSEAGVGFIESKDLEFFSNNRAQIY
                     EKLNFLTPLKEKLAILDEDGNFFFESRIGALYPYYKEDKNYFYGKIGPKKYKISKDNA
                     SNFPLSFNDENLKNQISEVLNLPYGWGGYNFERDCSLLTRDVFSAFGLYLPRNSAAQK
                     NSFTHFDINTLDNSQKKDFLDRFGKAYLNLLYLPGHIMLYAGKISDKNVAVHNIWGLR
                     KDETQRLLISSSVITSLEIGKDEISKENLLLSRLKEVSFIYLSKEEKEQITNYLEKLK
                     NKAD"
     gene            complement(14196..15068)
                     /locus_tag="ACJE1S_001059"
     CDS             complement(14196..15068)
                     /locus_tag="ACJE1S_001059"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HGG0806612.1"
                     /translation="MKIALIQQKFHFAKEKTIEKTCEFIEQAAKQGAELVCLGELHQS
                     EYFCQSENVDFFDLANDYEKDVQFWSSIAKKHGVVLLTSLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLVCWDQWYPEAARL
                     MALKGAQILIYPTAIGWFDKDEKEEKQRQLGAWLGVQKGHAIANGLYTIAVNRVGFEE
                     DKSGVEEGIRFWGNSFVFGPQGEEICILDSENECIKLVDIDLQRSENVRRWWPFLRDR
                     RIEYFGDLSKRFID"
     gene            complement(15065..15952)
                     /locus_tag="ACJE1S_001060"
     CDS             complement(15065..15952)
                     /locus_tag="ACJE1S_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HGG0806613.1"
                     /translation="MNLQKKATLIASLCAIVLALIKFVVGITSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVSVGIFIFYESILKIYY
                     KEEIINLNASIYVMIFALILTFLLVLFLNYVVKKTKSLIIESDALHYKTDCLTNAFTL
                     AALVLIYFTNLHIIDAIFGIVVSLYTAFSAFKIIKKALAFLMDEALPKEQVNQICALI
                     SSNPEVISYHELKTRKTPNCNYLSVHLVFCPIISLLSAHKVSDEIENGVREMFNGEKW
                     DIQIHLDPYDDEEQERQRQ"
     gene            complement(15949..16926)
                     /locus_tag="ACJE1S_001061"
     CDS             complement(15949..16926)
                     /locus_tag="ACJE1S_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HGG0806614.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWKPYLGEIIQAYKDFVKAAS
                     EFQKVLLIAPSKSDFAPFENIANVDFFVCDTNDTWIRDFGAIDILEDNRLKALDFTFN
                     AWGNKFQSELDNEVNSKLFKEKFNEKLTKIDFILEGGSIDFNGEGVMLTSSNCLLNEN
                     RNSHLDKSQIEAKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHSICE
                     DEKDEHYIPLQKMKKELEATGFNLVELPLPKPLYYEERRLGATYANFVFVNDALIMPF
                     YKDENDEIIRQRLAKALPKRKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            complement(17023..17460)
                     /locus_tag="ACJE1S_001062"
     CDS             complement(17023..17460)
                     /locus_tag="ACJE1S_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HGG0806615.1"
                     /translation="MKKTLQIVLAAAFFAGCASTSVNSKSTSKISNEFMQNQLFEIDK
                     IVVNGKTFDPKNAEENPNISFENNKFYGYAGCNRFFGSYQSNENTLEIQGDRVASTQM
                     LCHPLDVMEFENAFLSNFKGSFTISNKNGKLILNNGEMEIFFK"
     gene            complement(17470..19062)
                     /locus_tag="ACJE1S_001063"
     CDS             complement(17470..19062)
                     /locus_tag="ACJE1S_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HGG0806616.1"
                     /translation="MFRTIGFKVSAAIFVVLVLSFIAMQLILNLDFKNTADKMSKSNL
                     NTVSSSVFQTMRMAMNLGDPEKIQEAIEDAKTIEGISDIKIYPSKETIELFEIKNPKI
                     SQEKLIIDQFTQPNLISLEQKLDNINHLRLIRPLIADESCIACHANANLGSVLGVMDV
                     YHSLENIEKDIVKTSRSYIVIFTIALIFTLVVVLFVLKMVVGNPIMELLSHAKELAQG
                     SGNLRARIRVKGRDEIAKACEYINQFIEKTQKTVSSASLNSKNVEKQSILLNSNAIEL
                     NEISTSSHQKIDSSFKLGVDIGADLDEISNLSSDANKANDKSYQLLDQMIHSLLEIDK
                     KVSDLVQNENNLALKIENMVKYAQNIQKATQMMGEIADKTNLLSLNAGIESARAGSYG
                     KGFSVIAEDIRALANNSEEFLHNVELIIKELLESIQEVTKELKENSHSIFSLNENTHL
                     LTSSANEVKLCNQNSKNLVTQCTQRIKISQENIQNLLIHMRENVEASGKNEEISKILL
                     QVADELKIVCHNLESELSQFQI"
BASE COUNT         6518 a         3368 c         2527 g         6660 t
ORIGIN      
        1 atttttaggc caaatttcaa attttaattc tcctttatga gtattaatga tttctttaga
       61 aagtgataag cctaatccat tgcctttaag tttagttgtc ttaaaagctt caaaaactgc
      121 attttcatct ttgatttcac aaccattatc ataaactcta atgtataaat tttgctcatc
      181 acagcttgct tgaattttga ttttaggatt ttcacactcg ctttcttcaa tcgcatctat
      241 ggcattataa attaaatttt gcaaaaccaa agacaaaagt gctttatctc cataaatttt
      301 catatctaaa aacttaattt caaaatcaat ttgagatgag tagttgtaag aatttatggc
      361 actttcgcac tcttctgtta attctaaaag attaaactca tttgcattga tgtgcacacc
      421 tttagtaaaa agtaaagtag aatttacgat acgctctacc ctagcaatag ccttttgaat
      481 ttcaagtacg atatgtttgt ttttaagttc gctacgagaa aaaagtgtag aagcaagcaa
      541 ggatatagat cctataggat ttcttatctc atgtgctaaa tgcgccgcca cacttcccat
      601 actagcaagt ctttcattac gcttttcatc gctaatatcc gtagctgaaa ctatggtttt
      661 ttcattatga gcgataattt taaccgcata aaatctattc tcaaattcaa gctcatcacg
      721 atttttttca agactgataa tatcaagcaa tttaggtttt ttcaaggctt cttgattttg
      781 caaaataata tttttttctt tatctaaaat ccaaagcgca ctaggcaaaa cctcgataat
      841 ctcatctacc atagcacgca aagaattgta attttcattt aaaattttat attcattttc
      901 tacgatataa gtttgctcta taaggctttg taagcctttt tgtaaggttt ctttttcact
      961 tgaatcaaga ctttttaaaa tattttcatt catttatctt cctctaataa aattttaaaa
     1021 tcatttaaat ctagcaaaag taaatcttgc ttgcaaattt tataaaattc tttactaaaa
     1081 ccattttttg aaatgataat ataattattt ggttctaact ttaaagattt tgcttttgat
     1141 tctaaaagat ttaaaatatt tctacaaatt tttttatttt taaatttaac ttcaccgata
     1201 aaacttatct catcatcctt ataataaaga tcaagttcta aatttttatc ccaataactt
     1261 tgcaccccac tcacttgaaa ttttttctca agtaattccc tagagagctg ttcaaaacaa
     1321 aaactttgat aaagctcaaa tttctcttta atcaatccca aaacttcttc ataatgattt
     1381 tgtaaaatca acttttcatt gggctttaaa aaataaaaaa agaaacgggt gaagtgattg
     1441 gcaaagataa ttttatcttg tatcacataa gatctcaatt cttttttaag tttttgtcgt
     1501 ttatctttta tcctttttgc ttctttgcta tgctcaagtt ttataatccc cgctcttaaa
     1561 agatatttta aagttgataa agctttaaaa tgctgaattt ttctattgat agaaaaacgc
     1621 ttacgattgt ttttagccag taagctaaga gcataagaag cggtttcatc aagcttaaaa
     1681 taatctttaa tatgtaagta atttttcaat aaaagatatt ctatattctc aaacacatct
     1741 tcttcaaaat ttaaactatc taaactctca aaaccctcaa aaacactata aaaatcaaaa
     1801 attttagcta aagctgaagt attgcaaaat tttgcaaagt gattaaaatt tatatttttc
     1861 ctttttaaaa gtatttttat agtataattt tagcaaattt ttaaaggatt gtgcttgcaa
     1921 atttcagatt taaaaaaaga aataatttta aaaaaaggca ccttgcattt tgactttaca
     1981 gctagtgctt tagcgctaaa atgcgtggaa aaagaaattg ctaaaatact accaagctat
     2041 gccaatactc attctgatag ctctttaaac tcttttaaaa ctcaacaaat ttatgaacaa
     2101 gcacgcaaag atatcaaaac aagccttgat ttaagcgatg aatttgcact tattgcttgt
     2161 ggatcaggct ctagcagcgc cattaaaaaa tttcaagaat tgcttggaat ttacatcccg
     2221 ccacttatca aagaaaagta ttttgataaa gtggataaaa acaccctacc cttagttatc
     2281 gtagggcctt acgaacatca ttctaacgag ctttcttttc gcgaaggttt gtgtgaatgc
     2341 ataagaattc ccctagataa aaaaggaaat atagactttg aaatcttaga aaaagtttta
     2401 aaagaaaatc aacacagaaa aatcattgct agtttttccc tcgcttcaaa tgttacaggt
     2461 atattaagtg attataaacg catttctaag ttagtgcgta aatttaaagg catagtcgct
     2521 tttgatgcgt caagctttat cccttataaa aatatagcct gcaagtatta tgatgcttta
     2581 tttataagct ctcataaatt aatcggcggc ataggaggtt ctggtctttt agcaattaaa
     2641 aaagaacttt gcggaagtaa acctagtttt gccgcaggag ggactgtagg ctatgtttcg
     2701 cgtacctctc aatgctatct ttgcaatgaa gaggctttag aagaaggagg gactcctgga
     2761 attttacaac tcattcgtgc gagcttagct tttaaaataa aggatgaaat aggcatagaa
     2821 gaaatagaaa aaaaagaaga aattttaaaa gaatacttct ttgaaaaact aaaaacaata
     2881 cctcatttaa tcctatatgc taataatata aaaactcgct tacctatctt tgcttttaat
     2941 attaaaaata tttctccttt tgacttagcc tatgaactga gtaaaaaata ccacatagaa
     3001 acacgtgcgg gatgtgcttg cgctggtcct tatgggcatg atttattggg cttaaaggac
     3061 aatgaggaat taaaaactaa accgggttgg ctaagaatta gtttgcatta tactcatgaa
     3121 aaagaagata ttgattattt ctttgaagca ctgcaaaaaa gtatcgctaa attaaaattt
     3181 taaagatggc gcagcggacg gggctcgaac ccgcgacctc cgccgtgaca gggcggcatt
     3241 ctaaccagct gaactaccgc tgcacctaag aagtaataat ttaatggtgg tcgctataag
     3301 actcgaactt atgacatcca ccttgtaagg gtggcgctct accaactgag ctaagcgacc
     3361 ttaatttttg gcgaccccta gaggatttga acctctgttt ccacacagag agagtgttgt
     3421 cctgggccac tagacgaaag ggtctaaacc cgataagtgg tgtcccgtgt tggattcgaa
     3481 ccaacggccc cctccttaaa agggagatgc tctaccggct gagctaacga gacatatggc
     3541 gcagcggacg gggctcgaac ccgcgacctc cgccgtgaca gggcggcatt ctaaccagct
     3601 gaactaccgc tgcacctaag aagtaataat ttaatggtgg tcactataag actcgaactt
     3661 atgacatcca ccttgtaagg gtggcgctct accaactgag ctaagcgacc ttaaaaaata
     3721 aatggtgtcc cgtgttggat tcgaaccaac ggccccctcc ttaaaaggga gatgctctac
     3781 cggctgagct aacgagacat tttttaaatg aaaatgtgat tatgccaaaa tatatatcga
     3841 tttgtcaagg aaatttagct tatttttgat attttctttc taaatagcgt gaaaatacac
     3901 ctataggtaa ggttaagata agatatgcaa aagctaaaac gatatatcct tccaaggttg
     3961 caaagatata tgaattcact tcttgtatac tttgggtaag ctcattaagt gcaatcacgc
     4021 ttaataaaga actgtctttg ataaggttag caagttgccc actaatagga gctaaaatat
     4081 ttttaatagc ttgaggaaaa atgatgtata aaaaaatttg cctttcgcta agtcctaaag
     4141 ccctagcgct ttctatttga atgataggta cacttaaaat ccctgctcta aaaatttcag
     4201 ataaataagc tgctgaaaac atggaaagga taaatatccc tacgatgtag cgatcatcaa
     4261 atcctaagct atttgcaatg atataaaaaa ctaaaagcac ttgcacaagc aagggggttc
     4321 ctcgtataag ctccacatat aaagtagcaa aaaatctcaa aataataatc ttacttaaag
     4381 aaaaaaagca aattacaatc cccaaaaata tactgcatat taaagcaaaa aaactaacag
     4441 atagggtttg aaaaaaacca tagataattt tatttttata ttctagtaaa gaaacaaaat
     4501 tgaaatgata agcactcaca ctaaagctaa aataaaaaaa taagcttaaa ataaaaatta
     4561 aaaccaaaga attaaaaaat atcgtttttt tagaaagtgg tgcttgaaat ttaaaatttt
     4621 tacatttttg tataaataaa gacaagtttt ctccttttat tgtagatatt ttagccaaag
     4681 tctaattaaa tttaattaag ctctaatttt aaaatttttt ataagttaaa cttaactatg
     4741 attataaaaa caaaataagg aaactaaaat gctgatttta ggacactatt tattaacaca
     4801 aaattcaaat ttttgcttta ttgatgaaag caaaaaacta aaaaaagatc aaatttcttg
     4861 ctttttgtat aatgaagaaa tcatccaaaa tgcaaaaaat gaaaatttgg attttgctgt
     4921 tttgatacaa gataaaaatg aaatttttct aagcaatgct ttaggggcta aatttttact
     4981 ttttgatgat gaaaatttag ctcgttttgc ttctgaagta gcggaatttt atctctttga
     5041 tagcaaaatt ttactcctag tagaaaattt acataaactt gaaaaagctt atgaattaag
     5101 acttgatgga gtgattttaa aaagtctaat acaagattat cattaagaaa aaaatcatcc
     5161 ttgatgataa tctttattta aatttctagt aaaatacata gctgcataaa ttccaaacat
     5221 agctataaag gttcctatca ataatgcata ttcatcttgc tttaacataa taaacaaaca
     5281 taaatataaa ataaataaaa tcgtagccat tactatagca aaacgctttt gccccatgat
     5341 gcttaaagtg taaagtgata aaggtataat tatagccaag cttgaaaaaa gataagcaaa
     5401 attaaatcct atgcgctcgc taaaacttaa aagcataagg taaaatacta tcaaacttgc
     5461 tcctaaaatc gcgtattgaa gtaaaataac atttttcttt gaagcaagct cgcataaaaa
     5521 caacaccaag aaagttaaaa taataaacaa atacccatat tttatcatac gatcgatcaa
     5581 gcgatactca tccacccctt gataaaactc aacactcaat cttcttttct ccaccctatc
     5641 atttgagatg ctattttgaa attcataaaa agcactaaag ccctttttat cgatagaata
     5701 atcatttggc aaagcatatt caaaggaagg gtttgtagca tttgagttta tatgtatgat
     5761 attttcttta gcttgcatat tagcatcaaa agagccataa ccttttaatt gtaaagttcc
     5821 acttacccat aaaacatctt ttaagatatt aaattgtaaa tcttttaaat ttccatttga
     5881 aaattggata gaattttcat caaaattgct taaattttcc atattaaaac ttgcattaaa
     5941 atccacgaaa gcagtataaa gcggaatttt ataaataccc ttaatgcgtt cttgatattt
     6001 taaatccacc caaagctcta atttattagg caaaattttt tcatttaaac ttggcgtata
     6061 aaactcatca ctaccccaag cttttcccat caatgaaata acattttgtg cattatattt
     6121 tctatcttct actaaggttt ttaacatcaa taaaggaata agtaaaacta tgcttataat
     6181 aaaaatcaaa acacctttta aagtaagaga ttttaatctt tgatttctag catactcttg
     6241 catgaattta ttttcgtcaa atttttgctc catctttttt ccctattcgt ttcttaaagt
     6301 atctaaaaca ttaatttgcg ttgctttttt agcaggataa taagaagata aagcaatgat
     6361 tattaaagca cccaccaagg ttaaagaaaa atccatcaca gataaatcaa gcggtaattt
     6421 gctcgtacca taaacatctg cgggcaaggt gacaatatca aaatttccta aaagccacaa
     6481 agcaaaaaat gcgagtatga ttcctatgat cataccgcca ccacctatta gcatgcctaa
     6541 ggcaaaaaag cttttcttaa cttctaattt actagcacct aaagcaagta aaagtgcgat
     6601 ttcggtgcga cgattcatta ctatcatcag taaagaactc actatattta agcttgccac
     6661 caagataata agcatcaaaa caataaaaag cgctcttttt tcaagtttaa gagcagaaaa
     6721 gaagttttga ttttgttccc accagcctac aacagcataa tcactcttta ggtaggattt
     6781 aagtttttct acatccttaa atgcattttc gctataaaca tgtacgccat cataactttg
     6841 ttgattgcta ataccaagta cttttctaag tgcatttaca tctgtataca tataagcttt
     6901 atcataaaat ataagccctg aagcaaaacg cgctttcaca tcaaaacgtt tagcttgtgg
     6961 aactaaagaa aatccactgg ggctaagatt tgaaaagata agtgaaagct tatcgttttt
     7021 atgtaaatta agctcatctg caagcactga acccacaagt atatcaaagc cgcttaaatt
     7081 ctcatctttt aaagctttag ctaccacttc attgatctta acttcatcgt taaaattcac
     7141 gccaaaaagg acgcctcctt caaagcgatt gtccgctttt gctacaactt gagtgctaat
     7201 atacggacta aaaagcaaat gaggaaattc tcttttgagc tctgttacca aatcatcatc
     7261 cataggagaa taaaattttg gcactatggt aataggataa ttcatcacaa aaaaacgctt
     7321 ttcaaattct ttatcaaagc cattcatgat agccattgct acaagtaaaa cgcaaagtcc
     7381 tacacaaact cctaaaaaag ccaaaagcat agagagattg ataaagggtt gctctttatc
     7441 aaatcttaag tatttaaaaa gtagatattt taaaacgctt tttttcaagc taaaattcct
     7501 tgtttaggcc cgctttttcc atggcattct ttaaattttt taccgcttcc gcaagggcaa
     7561 ggagcattgc gtggaacttt tttaaattca gcctcgccta aattatcctc actagcaccc
     7621 atttccactg atttttcaaa taaagcttca ttttcttgat ttgctttttc ttctaaattt
     7681 tgtgcttctt cttggttaaa tttcacacta aaaagcaatt tgatgctatc aaatttgata
     7741 cgattaacaa gctctaaaaa aagattataa ctttcttttt tgtattctac taaaggatct
     7801 ttttgattat atccgcgaag tcctatacct gtttttaaaa tatccatttg atataaatgc
     7861 tcacgccaag cattgtctaa aacttgcaaa tataaaatgc gctctatgtg atgaagctgt
     7921 ttagaatcca attttgacat tttttcatcg tatgattttt ctagtatttc gcttagtttt
     7981 tcttgcattt caatcaaact aagattttca aaatcacttt gtttaagttc aatggaacat
     8041 tcatccaaaa ttttagcttt taaattttca aaatttaaat ccgctccact ttcttcaatc
     8101 ataaaatcat tcatgacata agcactatat tctgcaatat tttgtgaaat tttagtttta
     8161 atatcgtatt cttcatctaa aagttcattg cggtaacgat agatggtctt tctttgttca
     8221 ttggccacat catcatactc aagcaaatgt tttctacttt caaaatgtaa gctttcaacc
     8281 tttttttgcg cattttcaac tgctcttgtt acaatccttg attctatatg ttcaccctct
     8341 tgtataccta agcgatccat aatatttttg atacgatctc caccaaaaat tcttaaaaga
     8401 ttatcttcca aactcaaata aaaacggcta atacctggat caccctgtct tccggcacga
     8461 ccacgaagtt gattatcaat cctacggctt tcgtgtcttt ctgtaccaat gatataaagt
     8521 ccacccaaag ctcttatctc atcatcgatt tttatatcca cgccacgacc tgccatattt
     8581 gtagcgatag tcactgcacc tttttttccc gcatcttgaa taattaaagc ttcttgctcg
     8641 tgatttttag catttaaaac atgatgagga attttttctt ttacaagcat attgtgaaaa
     8701 acttcacttc tttcaatgct cgcagttcct acaagtacag gttgtccttt agcgtttgct
     8761 tttttgattt cttcgattac agctttaaat ttttcatttt gagttttata aatcaaatca
     8821 tccttatcct gtcttttgat agggatattt gtaggtatag aaacaacatc taagctgtaa
     8881 atttgggaaa attcagttgc ttctgtttgt gccgttcctg tcataccggc taatttttca
     8941 tacattctaa aatagttttg aaatgtaata tcagctaaag tctggctttc ttcttgaatt
     9001 tttacatttt ccttagcctc taaagcttga tgaagtcctt cgctaaatcg gcgaccttcg
     9061 cttaaacgac ccgtaaattc atcaacgatg attacttcgt tatttcttag aacataatgc
     9121 acatcttttt caaaaagatt gtgtgccttt aaagcttgat caagctgatg agccaagata
     9181 gcattatcaa gactgtataa attttccaca ccaaataatt tttcagcttt ggcaattcct
     9241 gcttctgtga ttaagatatt acgatttttt tcatccacta taaaatcacc ctcaggttta
     9301 gcaggaggta aaaccgcctc acctctttgc atttgcttgg ctacttcatt tgccttgata
     9361 taaccgtcta aagtacgatt tgtagggcca ctgatgataa gcggggttct tgcttcatcg
     9421 attaaaatac tatctacttc atccacaata acaaaatgat gttctctttg taccttttcg
     9481 gcctttgaaa atttcatatt atcacgcaaa taatcaaaac caaattcatt atttgtccca
     9541 taagtaatat cacaatcata ggctttttta tgttctaaat cactattttg agatgaaaga
     9601 atcacgccta cgctaaagcc taaaaaatta taaatcgcac tcatttgttc cgcatctctt
     9661 ttagccaaat aatcattgac tgtaaccaca tgcacgcctt ttccactcat ggcatttagc
     9721 acaacaggta gagttgctac aagagtttta ccctcccctg ttttcatttc tgcgattttt
     9781 ccatcgtgca aaaccatacc gccgattaat tgcacatcaa aatggcgcat atttaaagtt
     9841 ctttttccca cttctctaac tatggcaaaa acatcattta aaatatcact ttcttttttt
     9901 tctccgctta gaatttgctc tttaaatttt ccaaattcag cctttaattc atcatcactt
     9961 aaattttgat atttactctc aagagcattt atttgtgcta ctcgtttaag atattttttt
    10021 acctcacgat cattttttgt cccaaatacg gcttttaagg tatttaaaaa catttttaaa
    10081 cctcttttga tatttttttc aagctatgat tataacgatt atttaattaa aattagctag
    10141 aatgttgtaa aaattccaaa ataaatttag aaggtaagta tatgaaaaaa atattttgtt
    10201 tatttttctt ttttttaagt catattttag ctattgatct taattttaac acctattcta
    10261 gcaatttcac gcaatcagta aaatcaaaag attcaaccct ttcatactca ggacatttta
    10321 tcttaagtca agaacaagct tattggagct atgacactcc aagcaaaaaa gaaatatata
    10381 tcaataaaaa tcaaatcatc ttagtagaac atgatttaga acaagttgtt ttttcacatc
    10441 ttgataacat ccctaacctt aatgaaattt ttaaaaaagc aaagcattta aatgacaatc
    10501 aactgatcgc aaaatatgaa aatataaatt atactatcac gctcaaagat aatgaaattc
    10561 aaagtattgc ttataaggat gaatttgaaa acgatatttt aatcactcta aaccatcaaa
    10621 tcaaaaatcc tactatcaat cctgaagttt ttaaacccaa atttcctaat tattacgata
    10681 tggttcgcta agattaaggc attgttaaat ttgtatccaa attcaactca aagccttttt
    10741 cttcagagct attattttct ttaaaaattt gcggtggatt tgcaatcaaa tctcgcttta
    10801 tcttctcttc tatatctgaa gtcattttag ggatattaag agtattgata tcgatttctc
    10861 cattgtcata ttgattttgt gtattatcat cttgaaaaag ttgatctatt tgtggagttt
    10921 ctatattgga aatatttgga accgtgggag tttgaggaag ttctaaatta tcaagagctt
    10981 ttttaacttc gctacctaca tttttttcct tagcttcagt acttgccaag aaacgcttaa
    11041 attcttctaa atcaaatttt tctactccgc ttagagataa gatataaatc tcgttgattt
    11101 taattttgta ttttttatct ataaattttt ctaaagtttt tttaaaatta ttttttccaa
    11161 gctctgtaaa aatatcttca taaaaaaatc cagaaatcac ggtatttacc gcatctgtaa
    11221 gcttgttttc attttctttt aatttctcgc cttcaaattc taaagaaatt tcaatttttt
    11281 taagtacatt tgctccgctt tttgagtata aatctgttct tattttatca agctctaaac
    11341 tttgtgcatt aaggcttaaa gataaaaaag caagtaaaaa tatttttttc attctcatcc
    11401 ttttaaatga tattattttc caattcaaga tctaaaaaat cattattttg ataaaattct
    11461 ctcacactta tatcaaattt taaaatacta gcaaaatagg ctttaaaatt tattcttttt
    11521 gtaaaataaa ttttaagagt agcaggattt atagcacgcg ataaagccac ataaagttgt
    11581 ccgttttcaa aaatatgatc aatatcgcat actaattttt ctatactcat accctgtgat
    11641 ttatgtatgg taatagcata agctagtttg ataggaaatt gacttacgct tgcaagtaca
    11701 ttgataaaca tttcattatt attttgctca agctcttcca taaaaaatac atagggttca
    11761 agcataattt taataccatt gtttttcatg ataccaatat aagtcttatc ctcttcataa
    11821 gtgatacttt cgatgatgcc ttgctcgcca ttataatatc ccttatccca attattcaca
    11881 caaaaaataa cgcgtgcgcc tattttgagt ttaagctcgt ctaaaatatt taaacttttt
    11941 atccaagttt gaattttgtg ctcatctata tctttagatt ctttgcaaat ttcagcctta
    12001 aaacaaacaa gcggactttc aagcttgctt aatctatcat cattgacagc atttaccttt
    12061 ttatttatac tacaaagcaa ggtataatca tcatctaatt cttctaattc ttttgtattg
    12121 atacataaat tttcaaaaaa atttaaaatt ttatcatcta aaaatccttg cctaatcaag
    12181 gataaatttc cataaaattc taaattatgc gttctttttg gttgagttaa tttgatattt
    12241 ttaaatttta attctttcca aaaaaaggaa gaaaaagcat aggtagaatt taaaaaaaga
    12301 ttttcttttt tctctttaat cacgggcggt aattgaaaaa aatcacccac aactaaaatt
    12361 ttaccatcaa attgcgaatt tttcaatcta aaacctatca tctcaaaaat atcagcactt
    12421 accatagaaa tttcatcgat gatgattaaa tcaatttttt taagattttc ttttaacttt
    12481 aaaatcttct ctctttgttt ttgattgcga tcaaaaacgc taagcgtatc catatcttga
    12541 caataaccca aacaaaaaaa actatgcaag gttgcccctg ctatattaaa tgctgaaagt
    12601 gcgctagaac caagagctat aacgaccttg ccttgtcttt tgtaagagcg tatgagttca
    12661 ttggttaaaa aacttttccc aacgcctgcg ccaccactta aaaaaacatt atcatagact
    12721 aaaaatttct ctagtttatc aagcattata tttccttggc tttaattata actacttttt
    12781 gtaaaaggtt gattatgaaa atttggctat atccttgtct tacagcacta ttttttaccg
    12841 cttgttctat aaaagaaaca aaattaagtc caaccccatc tcaaactatt ttaaatttta
    12901 aagatcagca agactcacac tatgcaaaac tcgaatttga tcaaaatatc agcattttat
    12961 ccaaaatgaa tcaaaatata aattttgatt ctcaaaaata caaacaactt ttttttagcc
    13021 catggcacag ctcttttaaa actttaaaaa atcaaaatct tttttggtca ttttctttat
    13081 atacaaatcc taaaaatact tattatttct ttaacaagca agtaattcct ttatcatggt
    13141 ttgaaaaaac tatagataat gcaaacacta aagagctagg caagtttgat aaaaaagctt
    13201 tagtaataca aaacaccctt attaaaaata tccctacgca aagagcgatt ttaaaaaatc
    13261 cttttcttga aaatgaagga attccttttg attatgcaag cgatagtatt ttaaatgcgg
    13321 gtactcctat tttagtttcg cattttagca aggataagcg ttatgctttt gtattaagcg
    13381 aagcaggggt gggttttata gaaagcaaag atttggaatt tttctctaac aatagagcgc
    13441 aaatttatga aaagcttaac tttcttacac ccctaaaaga aaaactagct attttagatg
    13501 aggatggaaa ttttttcttt gaaagcagaa tcggagcgct ttatccttat tataaggaag
    13561 ataagaatta tttttacgga aaaataggcc ctaaaaaata caaaatatct aaagataatg
    13621 caagtaattt tcctctaagc ttcaatgatg aaaatttaaa aaatcaaatt tctgaagttt
    13681 taaatttgcc ttatggctgg ggtggttata attttgaaag agattgctct ttacttactc
    13741 gtgatgtctt ttcagctttt gggctttatt tgccaagaaa ttcagctgcg caaaaaaatt
    13801 cttttacgca ttttgatata aacactcttg ataattctca aaaaaaagat ttcttagatc
    13861 gttttggaaa agcttattta aatttactct atttgcctgg tcacataatg ctttatgcag
    13921 gaaaaatttc agataaaaat gtcgctgtgc acaatatatg gggattaaga aaagacgaaa
    13981 cccaaagact gcttataagc tcgagcgtta ttactagctt agaaattgga aaagatgaaa
    14041 tttcaaaaga aaatttattg ctttcaagac ttaaagaggt aagttttatt tatttgagta
    14101 aagaagaaaa agaacaaatt acaaattatt tagaaaagct aaaaaacaaa gcggactaat
    14161 tttaaaaagc ccttattaaa gagcttttta aatttttaat caataaatct tttcgataaa
    14221 tcaccaaaat actctatgcg tctatcgcgt aaaaaaggcc accaacgacg cacattttca
    14281 cttctttgta agtcaatatc gacaagcttt atgcattcat tttcactatc taaaatacaa
    14341 atttcttcac cttgtggtcc aaaaacaaaa gaatttcccc aaaatcttat cccctcttct
    14401 acaccacttt tatcctcttc aaaacccact ctattgactg ctatagtata taaaccatta
    14461 gcaatagcat gtcctttttg aacccctagc caagcgccaa gttgcctttg tttttcttct
    14521 ttttcatcct tgtcaaacca accaatagca gtaggataaa tcagaatttg agctcctttt
    14581 aaagccataa gtctagctgc ttcaggatac cactgatccc aacaaacaag cactccaagc
    14641 tttcctaaac ttgtatttat aggctcaaaa cccaaatcac ctggggtaaa atagaatttt
    14701 tcataaaaac aaggatcatc aggtatatgc atcttgcgat attttcctgc tatacttccg
    14761 tctttttcaa aaactacagc agtattatga taaagccccg cgcttctttt ttcaaaaagt
    14821 gaagtaagca aaactacacc gtgcttcttt gctatactcg accaaaactg cacatctttt
    14881 tcataatcat ttgccaaatc aaaaaaatct acattttcac tttggcaaaa atactcgctt
    14941 tgatgaagct ctcctaagca aacaagctcg gctccttgct tggcggcttg ttcgataaat
    15001 tcgcaagttt tttctatggt tttttcttta gcaaaatgaa atttttgttg aattagtgca
    15061 attttcattg tctttgcctt tcttgttctt catcatcata aggatctagg tgaatttgta
    15121 tatcccattt ttccccatta aacatttcac gcacaccatt ttctatctca tctgaaactt
    15181 tatgtgcgct taaaagcgaa attataggac aaaacaccaa atgaacgctt aaataattgc
    15241 aatttggagt tttacgcgtt tttaactcat gataagaaat cacttcagga ttactagata
    15301 ttaaagcgca aatttgatta acctgctcct taggcaaagc ctcatccatt aaaaaagcta
    15361 aagctttttt gataatttta aaagcagaaa atgcagtata aagactcacg actatgccaa
    15421 aaatcgcatc aataatatgc aaatttgtaa aataaatcaa aaccaaagct gctaaagtaa
    15481 aagcattagt caagcaatct gttttataat gtaaagcatc actttctata attaagcttt
    15541 tagttttttt aaccacataa tttaaaaaaa gtacaagtag aaaagtaagt attaaagcaa
    15601 aaatcattac ataaatactt gcatttaaat taataatttc ttctttataa taaattttta
    15661 aaatactttc ataaaaaata aaaatcccta ctgatacgat gaaaacacct tctaaaagtc
    15721 ccattaaagc ttcgatttta gaaaaaccaa aattataatt ttcgtttgct ttttgagaac
    15781 ttttttttaa ggctaaaaag ttaaaagccg atattgcaaa gtccatcaaa gaatcaatcg
    15841 cacttgaaag tacagctact gaaccgcttg ttatacccac tacaaattta atcaaagcca
    15901 atactatagc gcataaactt gctataagcg ttgccttttt ttgtaaattc atcttagacc
    15961 cttgaagcgg ttttgacaag agcagtgtaa agagccattt tggcgtaaaa acactcttgc
    16021 atctacgcct ataatcttgc gtttaggtaa agccttagcc aatctttgcc ttatgatttc
    16081 atcattttca tccttataaa aaggcataat caaggcatca tttacaaaaa caaaatttgc
    16141 ataagtggct ccaagtcttc tttcttcata atacaaaggc tttggcaagg gtagctctac
    16201 taaattaaac cctgtggctt caagttcttt tttcatcttt tgcaagggta tataatgctc
    16261 atctttttca tcttcgcaaa tagaatgcgc tatagtattt ttatcgataa atcttgctaa
    16321 agtatcgata tgatgatctg tatcatcacc ttttataaaa ccattttcta gccaaataat
    16381 ttgttttaag ccaaaaattt cttttaattt tgcttcaatt tggcttttgt ctaaatgaga
    16441 atttctgttt tcatttaaaa gacaattgga gcttgtaagc attacgcctt cgccattaaa
    16501 atcaatactt ccaccctcta aaataaaatc gatttttgta agcttttcat taaatttttc
    16561 tttaaaaagt ttagaattta cttcattatc tagctcgctt tgaaatttat ttccccaagc
    16621 attaaaagta aaatcaagag cttttaaacg attgtcttct aaaatatcaa tagcaccaaa
    16681 atcgcgtatc catgtatcat tagtatcaca tacaaaaaaa tctacatttg ctatattttc
    16741 aaatggagca aagtcgcttt tactaggagc gataagtaaa accttttgaa attcacttgc
    16801 tgctttaaca aaatccttat aagcctgtat aatctctcct aaataaggct tccaatcact
    16861 cttttcatga ggtaaagaaa gcattaaata ttcttgctca ctccattcgg gaattgattt
    16921 tatcatttaa ctaccttttt tgataataaa attataattg tatcattttt tagttttttg
    16981 tcaagtcgaa gaaaaacact cctaactaag gagtgtggca tgttatttaa agaatatttc
    17041 catctcgccg ttgttaagga ttaatttgcc atttttattt gaaattgtaa aacttccttt
    17101 aaaatttgaa agaaaagcat tttcaaattc cataacatcc aaaggatggc aaagcatttg
    17161 agttgaagcg acacgatctc cttgaatttc taaagtattt tcattacttt gataagaacc
    17221 aaagaaacga ttacatcctg cataaccata aaatttatta ttttcaaaac tgatatttgg
    17281 gttttcttca gcatttttag gatcaaaggt tttaccatta actacgattt tatctatttc
    17341 aaaaagctga ttttgcataa attcattgct gattttagaa gttgactttg aatttacaga
    17401 agtgctagca caaccagcaa aaaaagctgc agctaaaaca atttgcaaag tttttttcat
    17461 atttttcctt taaatttgaa attgactcaa ttcactttct aaattatgac acactatttt
    17521 taactcatct gcgacttgaa gtagaatttt agagatttcc tcatttttac cgcttgcttc
    17581 aacattttct cgcatatgta taagcaaatt ttgaatattt tcttgcgaaa ttttaatcct
    17641 ctgagtgcat tgggtcacaa gatttttaga attttgattg caaagtttta cttcgtttgc
    17701 actacttgta agcaaatggg tattttcatt gagtgaaaaa atactatgag aattttcctt
    17761 aagttcctta gtaacctctt gtatgctctc taggagttct ttgattataa gctctacatt
    17821 gtgtaaaaat tcctcactat tattagccaa agctctaata tcttcagcaa tgacagaaaa
    17881 acctttacca taactacccg ctctagcaga ttctatacct gcatttaaag ataaaagatt
    17941 ggttttgtct gctatttcgc ccatcatttg tgtagctttt tgtatatttt gtgcatattt
    18001 gaccatattt tcaattttta gtgccaagtt gttttcattt tgcactaaat cacttacttt
    18061 tttatcaatt tcaagaagtg agtgtatcat ctgatctaag agctgataag atttatcatt
    18121 tgctttattt gcatcgctag aaagattaga tatttcatcc aaatccgccc ctatatcaac
    18181 gcctagctta aaactagaat ctatcttttg atgactagaa gttgaaattt cattaagctc
    18241 tatagcatta gaatttaaaa gtatgctttg tttttctaca tttttggagt taagacttgc
    18301 actgcttact gttttttgag ttttctctat aaattggtta atatactcgc atgctttagc
    18361 gatttcatca cgccctttaa cccttatcct agctcttaaa ttcccacttc cttgtgctaa
    18421 ttctttggca tggcttaaaa gttccataat aggatttcct acaaccattt taagcacaaa
    18481 aagtaccact acaagcgtaa aaattaaagc tatagtaaaa atcactatat aagatctact
    18541 cgtttttaca atatcttttt ctatgttttc taaagaatga tatacatcca taacacccaa
    18601 aacactaccc aaatttgcat tggcatgaca agctatacaa ctctcatctg cgatcaaagg
    18661 acgaataagc cttaggtgat taatattatc aagcttttgc tctaaagaaa ttaaattagg
    18721 ctgtgtaaat tgatctataa tgagcttttc ttgtgaaatt ttagggtttt taatctcaaa
    18781 aagttctatg gtttctttcg aagggtaaat tttaatatca ctaatacctt ctatcgtttt
    18841 agcatcttca atggcttctt gaattttttc aggatcacct aaattcatag ccattctcat
    18901 ggtttgaaag acagaagaac taacggtatt taaattagat ttactcatct tatctgcggt
    18961 atttttaaag tctaaattta aaatcaattg catagcaata aaactcaaca ccaaaacaac
    19021 aaaaatcgcc gcagaaactt taaaacctat agttctaaac atttttttct ttc
//
LOCUS       DBBXOW010000033        18569 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.034, whole genome shotgun sequence.
ACCESSION   DBBXOW010000033 DBBXOW010000000
VERSION     DBBXOW010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18569
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.034"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(12..1544)
                     /gene="purH"
                     /locus_tag="ACJE1S_001064"
     CDS             complement(12..1544)
                     /gene="purH"
                     /locus_tag="ACJE1S_001064"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HGG0806617.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFELLSTGGTFKLLKENEVKV
                     VEVSEFTKSPELFEGRVKTLHPKIHGGILHKRSDESHIKQAKENGILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKTIEALKKGEND
                     EKFRLNLMIKAYEHTANYDAYIANYMNERFNRGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSTNFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSISAYGGVVAVNGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPYLIRSFDSYDFKHIDGGFVYQNSDEVGEDELKNAKLVSQREASQ
                     VEIQDLEIAMKVATLTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIVKAQEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVIQAANEYGIALYFTGVRHF
                     LH"
     gene            complement(1660..2430)
                     /locus_tag="ACJE1S_001065"
     CDS             complement(1660..2430)
                     /locus_tag="ACJE1S_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HGG0806618.1"
                     /translation="MIFVLIILTILVFYWYYKTWGKQDFLNSVTRGAKGFAKGFARGV
                     MEERIDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMISQILDANAKDERERAFLKAS
                     FNEHKENIHDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALVDADFSAKKREILEQIA
                     KAFDIAKSELDNFIASISNLKSTKKELSLDEAYRILELSNNADLNAVKKQYRALAKKY
                     HPDILNANNVSEEELKKGVEKFQKINEAYEKIKKHLEK"
     gene            complement(2427..4613)
                     /gene="purL"
                     /locus_tag="ACJE1S_001066"
     CDS             complement(2427..4613)
                     /gene="purL"
                     /locus_tag="ACJE1S_001066"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HGG0806619.1"
                     /translation="MDKETIKAHKISDEEYEQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDGKCGKHQKYLVKGVVSGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGICKSEDIFYAKAEGIGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDQTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWN
                     LDAVVMGEVTDTGKMELFWHDELVGLIPIDPLSEKAPILDRPVSEPKYLNEIKDYNFT
                     LKMSQQELFEKMLKNENINNKAFIYDQFDSSVQTNTIKADGALGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVAAAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKQACKELNTPVASGNVSLYNETEGVSIFPSPTIVNVGVLEDANKTLKANFEK
                     ENTIVYLLGESFGEFAASMAMKIQDKKVAGSLKELDYKAELALWNLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSMGANLNSGFSDEKMIFDESASRAIVGLDKENEEAFLK
                     LAHELGVKATKLGFSTKEQSFKLDSINLSKDELNKLYFDSFKEQIQ"
     gene            complement(4624..5952)
                     /gene="mnmE"
                     /locus_tag="ACJE1S_001067"
     CDS             complement(4624..5952)
                     /gene="mnmE"
                     /locus_tag="ACJE1S_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HGG0806620.1"
                     /translation="MNDTIVAIATAHGVGSISIIRLSGERALEIALKLSKKNELCPRY
                     ATFTKLFNQKNEFLDEAIVIYFKAPFSFTGEDIVEFQVHGGFSVSEILLEELISLGAR
                     LAEPGEFSKRACLRGKMSPLKALNIQDLILAKSANAAKIIARNMQGSLGELLDKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYKRAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL
                     KTQFDKPCDIDFIELSVQNDIQILKEKLEKYLNSLDSDGFLVSSIALINACKISSEAI
                     LRAKELLSENSLELFAFELNLAIGELAKFTKDFDRNEILDEMFGNFCLGK"
     gene            complement(5945..6796)
                     /locus_tag="ACJE1S_001068"
     CDS             complement(5945..6796)
                     /locus_tag="ACJE1S_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HGG0806621.1"
                     /translation="MRVEAKDLQSALTEASKSLECSVIDLEYEIIQYSKNGFLGFWRK
                     NAIIEARAKKQPYSKKNSRKDFNASKNDVHRNYEKPYRKFDDRSKIDNKKEFEVEARE
                     VKPKEKYVVKSDGIFDSFHKESGGTRNKEDILDEIRIQLENLLKATCFNISLVELRMY
                     DEESVFIRLDGDDAALLIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQG
                     MQIYLQGVIEKVKINGRGQTKPLDGVLIKIALEKLRAEFPNKYVGIKQNNDQRYVVIN
                     DFFKKDE"
     gene            complement(6801..8396)
                     /gene="yidC"
                     /locus_tag="ACJE1S_001069"
     CDS             complement(6801..8396)
                     /gene="yidC"
                     /locus_tag="ACJE1S_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HGG0806622.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQQIKLEQNIT
                     TTQADSQNATNINAPQQNPQANLNVAATSNTIPQDKIIADIKSEHFEAQIDSLGRIVN
                     FYLQDKKYQNEKGEAINLISKGNLPYPLEMRFSDPAINTQAFSVPYAADMSEVFIDEN
                     GSKTLKLTQQLSDLIVEKKITFYSKGNYDIEVKLSKNINYFISPGYRPSIAVDSYTVH
                     GALVMDDQETIHTYEDGDMDKDENIKNAWMTSAFDRYYAAFFYNFEKPLNVTISKDAQ
                     DNPLVFAMSDNEFKAGGYMGPKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLH
                     NHIGNWGWAIVIMVLIIRIILFPLTYKSMISMNKLKDLAPKMKELRERYKGDPQKMNM
                     HMMELYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPY
                     FILPILMGVTMFIQQLITPMTIQDPMQAKIMKFLPIIFTFFFITFPAGLTLYWFVNNL
                     CSLVQQWVINKMFAKEHHKKQAE"
     gene            complement(8393..8737)
                     /gene="yidD"
                     /locus_tag="ACJE1S_001070"
     CDS             complement(8393..8737)
                     /gene="yidD"
                     /locus_tag="ACJE1S_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HGG0806623.1"
                     /translation="MVCLKTLRFYQKFLSPLKPPVCRYYPTCSEYAFWQFQKRNCILA
                     FFSSFFRILKCNPFFKGGFDYPKITKNITSCNLCFKPIFLAQKQLYFLYIPHHQDKSF
                     YLVKIIFQRTNK"
     gene            complement(8734..9060)
                     /gene="rnpA"
                     /locus_tag="ACJE1S_001071"
     CDS             complement(8734..9060)
                     /gene="rnpA"
                     /locus_tag="ACJE1S_001071"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HGG0806624.1"
                     /translation="MKTFGKFSENEEFSAVYKTGKKWYCDGIIIFYLKNDEQKMAVVA
                     SKKVGKAVIRNRSKRILRALFTQFENKLQNGKYIFVAKSEITQFPFSRLEKNLKWGLK
                     KLECLK"
     gene            complement(9057..9191)
                     /gene="rpmH"
                     /locus_tag="ACJE1S_001072"
     CDS             complement(9057..9191)
                     /gene="rpmH"
                     /locus_tag="ACJE1S_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HGG0806625.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            9330..9809
                     /locus_tag="ACJE1S_001073"
     CDS             9330..9809
                     /locus_tag="ACJE1S_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HGG0806626.1"
                     /translation="MPKFEITTLKREELDILLEMIKEFAQYEEMEDSLQCSKEKLETS
                     LFDNQFARAFLLKEDENIIGYMIYFYTFSSFLGNGGIYLEDIYIRKIFRKKGYGRAVF
                     KFLGQICKKENLKRLDWVCLNENILGINFYEGLKAQHLKQWRNYRLSGENLEKLCEL"
     gene            9806..10414
                     /locus_tag="ACJE1S_001074"
     CDS             9806..10414
                     /locus_tag="ACJE1S_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG0806627.1"
                     /translation="MIRTLHYLKAMGYDFTDENLKLHSKIENFKDLRKNIQECTLCHF
                     SKSRCFTLMENEIKNASLMIVDTLAHKNENEKGVLLNSKKGERLKFYLKEILGLCEKE
                     FYFSYLFKCFSNGKFDDFSLQSCLPFFWNELELVQPKMILCLGEYPFKSLGFSDFNAL
                     RGEIFAYKNFFIMASFELEFIEKNPSCEKIFIQDLKKIKGFL"
     gene            10411..11607
                     /locus_tag="ACJE1S_001075"
     CDS             10411..11607
                     /locus_tag="ACJE1S_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806628.1"
                     /translation="MKKIFLILCLCFGFVFAKEQKLVDVKPAENFYPKISTQECDSNC
                     LLELLEARLYLSFLSEFVDQHDQFLSNIYAKLLNSITDFDKNLQKITSVKLAIIIPEK
                     TIKSYSNTIINSSIAYLLSQRAEIKVKVFLTGTEDNDKIRSTLEQVQAQGYQYAIAAL
                     TLKGVNQLKDYSGDMKIFIPTLHKNNVSFSNLNKNIIFGSIDYDAQVLALLNKANSDI
                     AAFSDGSMLSSNLNSRVLEQNANTRFYRVEGEKLDFYRLLRSQGSLNNASIFLNTPLI
                     KTALISSQLRVYNIQPFVLLSTQINYNSTFLSLTQEGDRKNFILANSIDNHDDNLSYL
                     NEIFNQSIDYNWIAYATSIGTDYFYTQFLNTKSDSLFDEKIQNSQILYKVRLMKGSKA
                     SFEELK"
     gene            complement(11599..11973)
                     /locus_tag="ACJE1S_001076"
     CDS             complement(11599..11973)
                     /locus_tag="ACJE1S_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HGG0806629.1"
                     /translation="MKIRIYYEDTDTGGVVYHSNYLKFCERARSEIFFAKNAPIFDAN
                     KGHFLLTKANCFFIKSAKLGDIIEVKTKLLKIKNASVDIAQEIYRDEILLFKVELTLA
                     YIQNEKPAKIDAGIKKLFEELF"
     gene            complement(12249..13535)
                     /locus_tag="ACJE1S_001077"
     CDS             complement(12249..13535)
                     /locus_tag="ACJE1S_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806630.1"
                     /translation="MSEIYEIYTPDGLTLDVEKDTNKILFKENIKPTGNYTEEYSKAV
                     FKSYYIMKNSPYKDYQSKYLDPNFYTGKASTLLEFTEWQSIYLKDPIKGSIAPWTKAE
                     KAYYKSLKTKRERYKYLIIRSGIRSTVIDIPYDAYANVDEKGYLINEEYAYIYDEVNN
                     NKETLKSSLFRQEWGMAAGILGKPEYFVRSKNHGFNARMIQCFILYIQLTGGGYEELG
                     IKRGIYNYADNLLEIGIGMAGIHKNPLRAKLVKELAKTIQPDEFGMLPFIDEIMGADW
                     VIDLNKYDFTYDEEGRIIWALYNDIEKGKLKDPRDVDSTPESRNEFDDAMDGYRNGMK
                     TNFDVDIRNERDERSAKLTMDTLILSAKLAALTPPQGYPNAPYYFTPERLEWIYKRGY
                     LDKLLDPRIPAIYRYNFPKELRAKILKFGEENGIKD"
     gene            complement(13669..14067)
                     /locus_tag="ACJE1S_001078"
     CDS             complement(13669..14067)
                     /locus_tag="ACJE1S_001078"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806631.1"
                     /translation="MTSFDNEAEMDETIFADYLFDFSNLYKLANHYADDYVAIVGQLF
                     LDDYIDFWRCAYHKMDNANTKTPNLSQYKKENKYETWKYFRDNYIYSYNDNLVNHATK
                     GDFWGIWIIGMCIISIAFALKKAQNILMKS"
     gene            complement(14269..14952)
                     /locus_tag="ACJE1S_001079"
     CDS             complement(14269..14952)
                     /locus_tag="ACJE1S_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011115043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806632.1"
                     /translation="MAIGKVIHKYGSFFPDFDEIFYKIKYEIYRGDWEMLFFLQIPNI
                     KKTDILEYFEDHFLGSTLQDGCEFNDTCFPLFFTEDENLKNSIKPNYNSEYVSIIGQL
                     FLAGYIEFGMCGLQNKEENLLSNQGDKYQAWIYFRDNFFYTEAYCRDIMEVKEPYKDM
                     SDDDYVYSSWNTPQYWDRYRFWVARTEKGTKYLREILEPRIYNKYKDLEVEIDDKGSV
                     LRWIGEINR"
     gene            complement(14962..15699)
                     /locus_tag="ACJE1S_001080"
     CDS             complement(14962..15699)
                     /locus_tag="ACJE1S_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806633.1"
                     /translation="MKYNYIKWNKEEKCAIFFPDIDYSLWKKTQLKENAYNNPSLIIS
                     SCLITKMDILELFEYYILFICGKSMGASRWECNDLILLGTCNIDNLSNPFSLNTPKPT
                     YISEYINILGQLFLAGYIDFGSYCDEEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFY
                     QDKFIRDLDDPETLDESGYSLILNDVSWDTPQYWSQYNIWVATTPKGTKYFNEILAPK
                     FYNKYKDLEVEIDDKGNILRWIGEINR"
     gene            complement(15689..16093)
                     /locus_tag="ACJE1S_001081"
     CDS             complement(15689..16093)
                     /locus_tag="ACJE1S_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005023010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806634.1"
                     /translation="MLGAVKNPKNSKNIIKKKSKYATKQEVIEVLKNKYNLKTSKELG
                     LGRSKNVFWVKDNKQIKEIWEEIADGADILKDINQDKLGGTIKMRKLDDQTIIQYKKA
                     SKSGGGTIEVNSNKPRGNLRTIHIENGVKNEV"
     gene            complement(16145..17431)
                     /locus_tag="ACJE1S_001082"
     CDS             complement(16145..17431)
                     /locus_tag="ACJE1S_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806635.1"
                     /translation="MLNYSIIENSLNIKLECLRKQSLEYKDLISNTLKEQKTTQVDKK
                     QSIAKLHALLENQNLECIHGGKVILKSNKGKSFKSDGIPIMLESDLLNSSIVACPHTI
                     ANVSYPCTKVVDIKGSLSQKKVNGEYAILQELISACKTDKGFALKVSFTPTKFKFDHS
                     FDPEEGLGEQSKNQIELKEARLRMYYKEHKYQKDNLFTNLYLNDTLYQNEQGLDKLEL
                     SKNDLFNLNDINVLNTLKQDFSKDYEFKECEIRLGMHLLKLIFVIPKNIAKVYKSAYK
                     EFKNKDLGVGYFTQLHEYDKDYRENENIIHHRVFLAPAKMQKIGFEIAKGLDEWLDNE
                     NVCCFNVYTKDYFNANDKDMLISDNIKDDTNTTQAHTNENYNNTQEIIPDNVIRIQTQ
                     DGSGEFIEIIFDEFKEWEKSSSGAIKPLFTPLEGIV"
     gene            complement(17785..18507)
                     /locus_tag="ACJE1S_001083"
                     /pseudo
     CDS             complement(17785..18507)
                     /locus_tag="ACJE1S_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935935.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         6023 a         3278 c         2369 g         6899 t
ORIGIN      
        1 aacacactca attaatgtaa aaaatgtctc actcctgtaa aataaagcgc tataccatac
       61 tcatttgctg cttgtatcac ttcatcatct cttatgcttc cacctggttc tactatggct
      121 ttaaccccta ctttacttgc ttcgtctatg ctatctctga aaggaaaaaa ggcttcacta
      181 gctaaaacgc aaccttgcaa atcaagcccc atttcttgcg ctttgacaat agctgcttta
      241 gccgcatcaa tcctacttgt catacccatt cctatggcta ccatagcgcc attttttaca
      301 taaacaacat tgtttgattt tgtaagagtt gcaactttca tagcaatctc aagatcttga
      361 atttctactt gacttgcttc tctttggctt acaagcttgg catttttaag ctcgtcttca
      421 cccacttcat cgctattttg atatacaaag cccccatcaa tatgtttaaa atcatagcta
      481 tcaaaacttc taatcaaata aggactttct tgagtaaaga ttttaatacg ctttttaccc
      541 tcaaatacag ccaaagcttt ttcatctaca tttgctgcga taatcacttc tacataaatt
      601 tcattgatct tatttgctaa agcctcatca agggttccat ttacagcaac cactcctcca
      661 taagcactta tactatcgca ttttaaagca tgtatatagc tttgtactaa attttctttt
      721 atcgcaaaac cgcaaggatt gccatgtttt acgatagcaa tagcaggagc cttatcaaaa
      781 ctacttgcta aatttaaagc tgcgttaata tcagtaagat tgttaaaact tgcctcgcct
      841 tttagagcct taaaattggt actaaaaaag gcatcaaatt catacaaagc tcctttttga
      901 tgtggatttt cgccatattt tgtatcaaaa actttttgac ctactatgaa tttactcgct
      961 ccaaaccccc tattaaatct ttcattcata taatttgcaa tataagcatc ataatttgcc
     1021 gtatgctcat aagcttttat catcaaattt aggcgaaatt tctcatcatt ttcacccttt
     1081 tttaaagctt caatcgtctt ttcataatca agcggatcgc aaagcaccat cacatcttta
     1141 taatttttag ccgcacttct tatcatcgca ggaccgccta tatcgatatt ttcgataatt
     1201 tcatcaaaat catcgctcat tatagtggtt tttttaaaag gatataaatt tacacaaact
     1261 aaatcaatgc ctaaaattcc attttctttt gcttgcttga tatgactttc atcgcttctt
     1321 ttatgtaaaa ttccgccgtg aatttttgga tgcaaagttt ttacgcgccc ttcaaaaagc
     1381 tcaggacttt ttgtaaattc acttacttct acaaccttta cttcattttc ttttaaaagc
     1441 ttaaaagtac cgcccgttga aagtagctca aaacctagat tttcaagttc ttttccaaat
     1501 tctactatac cttctttatc gctcacactt aataacgctc tcatattcac tccttttttt
     1561 aaatttcgtt tgaaatattt ttataaattt aatttatact agataaagtc cactcgttct
     1621 tagataagat tcttaaagga aaatattttt cttttaaaat catttttcta aatgcttttt
     1681 aattttttca taagcttcgt tgattttttg aaatttttct acaccttttt taagctcttc
     1741 ttcgctgaca ttgtttgcat ttaaaatatc agggtgatat tttttagcta aagctctata
     1801 ttgttttttt accgcgttta aatccgcatt atttgaaagc tctaaaatac gataagcctc
     1861 atcaaggctt agttcttttt tagtactttt taaatttgaa atactcgcaa taaaattatc
     1921 aagctcactt tttgcaatat caaaagcttt tgcaatctgt tctaaaattt cacgcttttt
     1981 tgcactaaaa tctgcatcaa ccaaggccat aaacacaagt acgcgaagta cattaaagcg
     2041 ttcatttttc ggtaaaggaa cttcttttaa aaaatccttt gccacataaa aagcatcgtg
     2101 gatattttct ttatgctcat taaagcttgc ttttaaaaaa gccctttctc tttcgtcttt
     2161 ggcgtttgca tctaaaattt gactgatcat ttctgcttca ttttcgctta ccctaccatc
     2221 actttttgct atctttgcca aaagtgcgat gacatagtaa ttcatacgcc ttttaaattc
     2281 atctatcctc tcttccataa ctccgcgagc aaagccttta gcaaaacctt tggctcctcg
     2341 cgtgactgaa tttaaaaaat cttgctttcc ccaagtttta taataccaat aaaacactaa
     2401 gatagttaaa ataattaaaa caaatatcat tgaatttgct ctttaaagct atcaaaataa
     2461 agtttattaa gttcgtcttt gcttaaattt atactatcaa gtttaaaact ttgctcttta
     2521 gtgctaaaac ctagttttgt agcttttaca cccaattcat gtgctagttt taaaaatgct
     2581 tcttcatttt ctttatcaag gcctacgata gcacgactag cactttcatc aaaaatcatt
     2641 ttttcatcac taaagccact atttaaattt gcacccatac tagaaatagc aaacattttt
     2701 gctaaagtca tagcaatacc ccctattcct acgctattgg cacactcaag taaagaattt
     2761 tgattggctt tataaagcaa attccaaagt gcaagttcag ccttataatc aagctctttg
     2821 agactacctg ctaccttttt atcctgtatt ttcatagcca ttgaagccgc aaattctcca
     2881 aaactttcac ctaaaagata aacgatagta ttttcttttt caaaatttgc ttttagggtt
     2941 ttatttgcat cttctaaaac gcccacatta actatagttg gacttggaaa tatgctaaca
     3001 ccttcagttt cattataaag cgaaacatta ccacttgcta cgggagtgtt taattcttta
     3061 caagcttgtt taatcccttc acaaccctgc gcaaactgcc acattacttc aggattttga
     3121 ggattaccat aatttaaaca atcgctaatc gctaaaggtt ttgcgcccgt acaagctacc
     3181 tttctacctg ctgctgcgac tgctaaagcg gctcctattt taggatttac ataatttaaa
     3241 cgcgaattac actctatagc cattgctaca cttgcaccat tttctttgat gcgtatcaca
     3301 ctcgcaccta aagctccatc tgcttttata gtatttgttt gcacactaga atcaaactga
     3361 tcataaataa aggctttgtt gttaatgttt tcatttttta gcattttttc aaaaagctct
     3421 tgttgagaca ttttaagcgt gaagttataa tctttaattt catttaaata ctttggttca
     3481 ctcacaggac gatccaaaat cggcgctttt tcactcaaag gatcaatagg tataagccct
     3541 acaagctcat catgccaaaa aagctccatt tttccagtat cagttacttc acccataacc
     3601 acagcatcca aattccattt tttaaagatt tctataacct tatcttcata gcctttttta
     3661 gcacaaatta acattctttc ttgagactca ctcagcatta attcataagg cgtcataccg
     3721 ctttctcgca taggagtttg atcaagataa agcttcatac cgctaccact tcttcctgcc
     3781 atttcaaaag agcttgaagt aagtcctgct gcacccatat cttgaatacc tacaatataa
     3841 tctgttttaa aaagctccaa gcaagcttcc attaaaagtt tttcactgaa aggatcgcca
     3901 atttgaacag taggtcttaa acttttactt tcttcattga agctatcact tgccattaca
     3961 gctccaccta acccatctcg gcccgtttta gagcctacat aaatcacagg atttcctatg
     4021 ccttcggcct tagcatagaa gatatcttca cttttacaaa tacccaaagc aaaagcattg
     4081 actaaaatat ttccattaaa acactcatca aaagcacatt ctccacctat agttggcact
     4141 cccatgcaat ttccataatg agaaattcca cttacaaccc ctttaacaag gtatttttga
     4201 tgtttgccac atttcccatc atggatatcg ccaaatttta aagaattcag ccctgcaacc
     4261 actcttgcac ccatggtgaa aacatcacgc aaaattcccc ctactcctgt agccgcaccc
     4321 gcaaaaggct ctataaaact aggatgattg tgactttcta ctttaaaaac ggctgccatg
     4381 ccttgaccta tatcgataac ccctgcattt tcacctggcc cttgaatcac ccaaggagct
     4441 ttggttggaa aaccattgag atatttttta ctggatttat aagaacaatg ctcgctccac
     4501 atcgcagaaa tgacacctag ttcaagtaaa tttggctcac gccctaaaat ttctaatatt
     4561 tgttcatatt cctcatcgct gattttatgt gcttttattg tttctttgtc catttgtatc
     4621 ctttcatttt cctaaacaaa aattaccaaa catttcatct aaaatttcat ttctatcgaa
     4681 atctttagta aattttgcaa gttcgccaat ggctaaattt aactcaaagg caaacaactc
     4741 taaagaattt tcactgagta attctttagc ccttaaaatc gcttcgcttg aaattttaca
     4801 agcattaata agagcgatag aactaactaa aaatccatca ctatctagcg aatttaaata
     4861 tttttcaagc ttttctttta aaatttgaat atcgttttga acactaagtt ctataaaatc
     4921 aatatcacaa ggtttatcaa attgagtttt taaatcactt ttatttaaaa gataaaaaat
     4981 ctttttatcg ctttgactta aaagcttaaa aatattttca tcctcttcat ctttttttct
     5041 tgaattatca aaaatagcta agataatatc tgcatcttca atgctctttt tactaagctc
     5101 tataccgatt tgctcaatct catctttact ttctcgaatt cctgcagtat caataatacg
     5161 caatagatgc gtacctagtt taaaactctc ttctatggta tcacgagtcg ttccagctat
     5221 atcagaaaca atagctcttt tataagaaag caaggcattt aaaagagaag attttccaac
     5281 attaggctta cccacaatag cgattttaaa accctctatc aatccttttt tactttctga
     5341 aagtgtataa atttctttta gaattttaga attttcttca cacattgtgc taatttgttc
     5401 tagtaaatca gaaggcaaat catcatcagc ataatcaata ctcgtttcca caaaagctaa
     5461 agtttttacc aaatctgtgc gaattttatc aagaagttct cccaagcttc cttgcatatt
     5521 tcttgcgata atctttgctg catttgcaga ttttgctaag attaaatcct gtatatttaa
     5581 agcctttaag ggactcattt taccccttaa acaagctctt ttactgaatt ctccaggttc
     5641 tgctagtctt gctcctaagc ttatcaactc ttcaagcaaa atttcactta cactaaaacc
     5701 accatgcact tgaaattcaa ctatatcttc acccgtaaaa ctaaaagggg ctttaaaata
     5761 gatcactatg gcttcatcaa ggaattcatt tttttgatta aaaagctttg taaaagttgc
     5821 atagcggggg caaagttcat tttttttgct taattttaaa gcaatttcaa gcgctctttc
     5881 cccgcttaat cttataatcg agatagaacc cactccatgg gcagttgcaa tagctactat
     5941 agtatcattc atctttttta aaaaaatcgt taattacaac atatctttga tcgttgtttt
     6001 gtttgatacc tacatattta tttggaaatt cagcccttaa tttttctaaa gcaattttaa
     6061 tcaaaactcc gtctaaaggt tttgtctgac ctcttccatt gattttaact ttttcaatta
     6121 caccttgaag ataaatttgc attccttgaa tttgattttc taaaaattgt gcaatttcaa
     6181 gacgaactaa aagattgtat ttgaggttga tccaattatg caaaagataa gaaatagcct
     6241 tgtaacgatg agcctcttta ccaattagca aggctgcatc atcaccatct aaacggataa
     6301 aaacgctttc ttcatcatac attcttaact ccactaaaga gatattaaaa caagttgctt
     6361 ttaataaatt ctctagctgt atgcgaattt catctaaaat atcttcctta ttgcgagttc
     6421 ctccgctttc tttgtgaaag ctatcaaaaa ttccatcgct tttgacaaca tatttctctt
     6481 taggtttaac ttctctagcc tctacttcaa attctttttt attgtctatt ttacttctat
     6541 catcgaattt gcggtaaggt ttttcataat ttctatgaac atcatttttg gacgcattaa
     6601 aatcttttct agaatttttt ttactataag gctgtttttt agctctagct tcgatgatag
     6661 catttttgcg ccaaaagcct aaaaatccat ttttggaata ctgaatgatt tcatattcta
     6721 aatctataac cgagcattca aggctttttg aagcttctgt taatgcactt tgaagatctt
     6781 ttgcttcaac tctcattttt tcactccgct tgttttttat gatgttcttt tgcaaacatt
     6841 ttattgatta cccattgttg taccaaagaa caaagattat taacaaacca ataaagagta
     6901 agacccgctg gaaaagtaat aaagaaaaag gtaaaaatga taggcaagaa tttcataatt
     6961 tttgcttgca taggatcttg tatggtcata ggggtgatta attgctgtat aaacattgtt
     7021 acacccatta aaataggtaa aataaaataa ggatccatta ctgataagtc gtgtatccaa
     7081 aacgcccaag gggcagcttt tagctctata gcattgagta atacgcgata aatagcaaag
     7141 aaaataggaa tttgtaaaag tataggcaaa catccgctca taggatttgc accatgtttt
     7201 ttataaagct ccatcatatg catattcatt ttttgaggat cgcctttata gcgctctctt
     7261 aattctttca ttttaggtgc taagtcttta agtttattca tggaaatcat agatttatag
     7321 gttaatggga ataaaattat acgaataatt aaaaccatta taacaatagc ccaaccccaa
     7381 tttcctatat gattatgtaa aaaatttaaa aattcaaaca taggcttagc tataaaagta
     7441 aaccaaccat actctacaac agcttcaaga cgcggatcta tagatcttaa aatcacatgt
     7501 tctttagggc ccatataacc accggcttta aattcattat cactcatcgc aaataccaaa
     7561 ggattatctt gagcatcttt actgatagtt acatttaaag gtttttcaaa attataaaag
     7621 aaagcagcat aatatctatc aaaagccgaa gtcatccaag catttttaat attctcatcc
     7681 ttgtccatat cgccatcttc ataagtatgg atggtttctt gatcatccat aaccaaagct
     7741 ccatgaactg tatagctatc tactgctatg cttggacgat aacctggact tatgaaataa
     7801 tttatatttt tacttaattt aacttcaata tcgtaattac ccttagaata aaaagtgatt
     7861 ttcttttcaa caattaaatc tgaaagctgt tgggtaagtt ttagtgtctt actgccattt
     7921 tcatcgataa aaacttcact catatccgca gcataaggca cgctaaaggc ttgcgtattg
     7981 atagcaggat cgctaaaacg catctctaaa ggataaggca aatttccttt gcttataaga
     8041 ttgatagctt cgcctttttc attttggtat tttttatctt gaagataaaa atttacaatt
     8101 ctgcctaaag agtcaatctg cgcttcaaaa tgctcgcttt taatatcggc aatgatttta
     8161 tcttgaggta ttgtattgct agttgcagct acatttaaat tcgcttgtgg attttgttgt
     8221 ggagcattga tattggttgc gttttgagaa tcagcttgtg tagtagtaat gttttgctct
     8281 aattttattt gttgcttagg tataaaaaaa taatcataca caacaaaaaa taaaaaagaa
     8341 ataactacag ctaaaagaat gcgtttttgc tgaaaaatat tattcgaatt attcacttat
     8401 ttgtcctttg aaagataatt ttaacaagat aaaaactttt atcctgatgg tggggtatat
     8461 ataaaaaata aagctgtttt tgcgccaaaa aaataggctt aaaacataga ttacaagaag
     8521 taatattttt agtaattttt ggatagtcaa atcccccttt aaaaaaagga ttgcatttta
     8581 aaattctaaa aaaacttgaa aaaaatgcaa gaatacaatt tcttttttga aattgccaaa
     8641 aggcgtattc tgaacatgtg ggataatatc tacaaacagg gggttttaaa gggcttaaaa
     8701 atttttgata aaagcgaaga gtttttaaac atactatttt aaacattcta gtttttttaa
     8761 tccccatttt agattttttt ctaatctaga aaaaggaaat tgagtgattt cacttttggc
     8821 aacaaaaata tattttccat tttgaagttt gttttcaaat tgagtaaata aagctcttaa
     8881 aatacgtttt gagcgatttc taatcactgc ttttccaact tttttactag caacaactgc
     8941 cattttttgc tcatcatttt taagataaaa gatgataatg ccatcgcaat accacttttt
     9001 acctgtttta tatacggctg aaaattcttc gttttcgctg aatttaccaa aagttttcac
     9061 acagcgagtc tttttctacc tttagcgcgt cttgcgttga tcaccttgcg accattttta
     9121 gtcttcatac gaacgcgaaa accatgagtg cgttttcttg gagtaccatg tggctgataa
     9181 gttcttttca tttcaatttt ccttaaaaaa atataaaata agcttgtatt ttatcttaat
     9241 cttacttata aattgctttt aattaagagt attttttatt ttattttgat aaatttgcaa
     9301 aatcaaatca acaaaggaat atttaaaaaa tgccaaaatt tgaaattaca acactcaagc
     9361 gtgaagaatt ggatattttg cttgaaatga ttaaagaatt tgcgcaatac gaagagatgg
     9421 aagattcttt acaatgttca aaagaaaaac ttgaaacttc tttatttgat aatcaatttg
     9481 cccgagcatt tttacttaaa gaagatgaaa atatcatagg atatatgatt tatttttata
     9541 ctttttcatc ctttttggga aatggtggaa tttatttaga agatatttac ataagaaaaa
     9601 tttttcgcaa gaaaggttat gggcgagcag tttttaaatt tttgggacaa atatgcaaaa
     9661 aagagaattt aaaaagactt gattgggtgt gtttaaatga aaatatttta ggtataaatt
     9721 tttatgaggg tttgaaagcg cagcatttaa aacaatggcg taactatcgt ttaagtggag
     9781 aaaatttaga aaaactttgt gagctatgat aagaacttta cattatctaa aggccatggg
     9841 ttatgatttt acggatgaaa atttaaaact ccattcaaaa atagaaaatt ttaaagattt
     9901 aagaaaaaac attcaagaat gtactctgtg tcatttttcc aaatcacgct gctttacgct
     9961 tatggaaaat gagataaaaa atgcctctct tatgatcgtt gatacactag cgcataaaaa
    10021 tgaaaatgaa aaaggagttt tgttaaattc aaaaaaagga gaaagattaa aattttatct
    10081 caaagaaatt ttaggacttt gcgagaaaga attttatttt tcttatcttt ttaaatgttt
    10141 ttctaatgga aaatttgatg atttttcgct acaatcttgc ttgccatttt tttggaatga
    10201 gttagaactt gtccagccta aaatgattct ttgtttaggt gagtatcctt ttaaaagctt
    10261 gggtttttca gactttaacg ctcttagagg agaaatcttt gcttataaaa atttctttat
    10321 aatggcaagt tttgagcttg aatttataga aaaaaatcca agctgtgaaa aaatttttat
    10381 acaagatcta aaaaaaatta aaggattttt atgaagaaaa tatttttaat cttatgttta
    10441 tgctttggct ttgtttttgc caaggagcaa aaattagtcg atgttaaacc tgctgaaaat
    10501 ttttatccaa aaataagcac acaagaatgt gactcaaact gcctactaga acttttagaa
    10561 gcaaggcttt atcttagttt tttgagcgaa tttgttgatc aacatgatca atttttatca
    10621 aatatttatg ccaaactttt aaattctatt acggattttg acaaaaattt acaaaaaatc
    10681 acttctgtaa agcttgccat catcatacct gaaaaaacta taaaaagtta ttctaatacc
    10741 ataatcaact caagcattgc ctatctttta agccaaaggg ccgaaattaa agttaaagtt
    10801 tttttaaccg gcacagaaga caatgataaa attcgttcaa cactcgagca agttcaagct
    10861 caaggctatc aatacgctat tgctgcacta acacttaaag gcgtgaatca attaaaagat
    10921 tattcaggag atatgaaaat tttcatccct actcttcata aaaataatgt ttctttttca
    10981 aatttaaaca aaaatataat ctttggaagc atagattatg atgctcaagt gttagcactt
    11041 ttaaacaagg caaattccga tatagcagcc tttagcgatg gatctatgct ttcgagtaat
    11101 ttaaattctc gcgtacttga acaaaatgca aatacaagat tttatcgtgt tgagggagaa
    11161 aaacttgatt tttatagact cttacgctcg caaggcagtt taaataatgc ttcaatattt
    11221 ctcaacactc ctttaatcaa aacagcactt ataagctctc aattacgcgt atataacatc
    11281 caaccttttg tgctcttatc aactcaaatc aattataatt ctacattttt aagtcttact
    11341 caagaagggg accgtaaaaa ttttattctt gcaaattcta ttgataatca cgatgataat
    11401 ctatcatatc taaacgaaat ttttaatcaa agcatagatt acaactggat agcatatgct
    11461 acgagcatag gaacagatta tttttacact caatttttaa ataccaaaag cgatagcctt
    11521 tttgatgaaa aaattcaaaa ttctcaaatt ttatataaag ttcgcctcat gaaaggatct
    11581 aaagctagtt ttgaagaatt aaaataattc ttcaaaaagc tttttaattc ccgcatctat
    11641 cttagcaggc ttctcatttt gaatatacgc aagggtaagt tcaaccttaa aaagcaaaat
    11701 ctcatctcta taaatctctt gcgcaatatc aactgaagca ttttttattt ttaaaagctt
    11761 tgttttaacc tctataatat caccaagttt agctgacttt ataaaaaaac aatttgcttt
    11821 tgttaataaa aaatgtccct tattagcatc aaaaatcggt gcatttttag caaaaaaaat
    11881 ttcacttctt gctctttcac aaaattttaa ataattacta tgatacacta ctcctccagt
    11941 atctgtatct tcataatata tgcgtatttt cattttagaa tccttttgtc aaaaattcaa
    12001 tcaaaaacta atgtatcaaa aaatatgtta aatttttcta attttaaaca tatctaaatg
    12061 aaattttatc catatttaaa aagtaatcaa gctttacatt attataaaaa ttaaaattaa
    12121 aatgcagttt tactttttaa gatatcttga agctgccata caaaacaata ttaaagaaga
    12181 taagattctt tttgagaatc ttaccctaaa agcattggaa aagtatatta aagattttga
    12241 gtgatttttt aatctttaat gccattttct tcaccaaatt ttagtatctt agctctaagc
    12301 tcctttggga aattatatct ataaatagca gggattcttg gatcaaggag tttgtctaaa
    12361 tatcctcttt tataaatcca ttccaatctt tcaggcgtaa aataataagg ggcattagga
    12421 tagccttgag gaggagtgag ggctgcgagt ttggcactta atattagggt atccatagtc
    12481 agtttagcag atctttcatc tctttcgttt ctaatatcta catcaaaatt agttttcatc
    12541 ccatttctat atccatccat agcatcatca aattcatttc tactttcagg agtagaatcc
    12601 acatctcttg gatcttttaa tttacctttt tcaatatcat tatataaagc ccaaatgatt
    12661 ctgccttctt catcataggt aaaatcatat ttatttaaat caatcaccca atctgctccc
    12721 ataatctcat ctataaaagg tagcatacca aattcatcag gctgtatagt tttagctaat
    12781 tcttttacca atttagccct taaaggattt ttatgtatcc ctgccatacc tatacctatt
    12841 tctaaaagat tatcagcata attataaatt cctcttttta tacctaattc ttcatatcct
    12901 ccacctgtga gttgaatata taaaataaaa cattgtatca ttctggcatt aaagccatga
    12961 tttttagaac gcacaaaata ttcaggtttt cctagtattc ctgctgccat accccattct
    13021 tgtctaaaaa gagaagattt taaggtttct ttattattgt taacttcatc ataaatatag
    13081 gcgtattctt cattgattaa atatcctttt tcatctacat tagcataagc atcatagggt
    13141 atatctataa ctgtacttct tataccactt cttataatta gatatttata tctttctctt
    13201 ttagttttta aagatttata ataagctttt tctgctttag tccaaggagc tatgcttcct
    13261 ttgataggat cttttaaata tatgctttgc cattctgtaa attcaagtaa agtagaagct
    13321 ttacctgtat aaaagttagg atctagatac ttggattgat agtctttgta gggggagttt
    13381 ttcataatat aataagattt aaaaaccgct ttggaatatt cttcggtata attgcctgtg
    13441 ggtttaatat tttctttaaa tagtatttta ttggtatctt tttccacatc taatgttaat
    13501 ccatcgggtg tataaatctc ataaatttcg ctcattattt atccttcgta aaatccaatg
    13561 taaaatccaa ataaactcat ctattaattt ttcctatcca tcttataata ttacccttat
    13621 catcaatctc tacttctaaa tctttgtatt tgttgtaaaa tttaggagct aagatttcat
    13681 taaaatattt tgtgcctttt tgagtgcgaa agcaattgat attatacaca tcccaattat
    13741 ccaaattccc caaaaatcgc cttttgttgc atgatttact aaattatcat tataagaata
    13801 aatataatta tctctaaaat atttccaagt ttcatattta ttttcttttt tgtattgtga
    13861 taaattagga gtttttgtat ttgcattgtc cattttatgg tatgcgcaac gccaaaaatc
    13921 aatataatca tctaaaaaaa gttgtcctac aatggctaca taatcatccg cataatgatt
    13981 tgctaattta tataaatttg aaaaatcaaa taaataatca gcaaaaattg tttcatccat
    14041 ttctgcttcg ttatcaaaac ttgtcaaaat tgtcatttca aacaattcta aaatatctgt
    14101 tttttaaggt ttggaatttg tagaaaaagg tgcatttcat agtatttact tattttttta
    14161 cctaactcgt aaaaataaaa attcatatac tctttattta atactttata tttcatctta
    14221 aatctctcaa attgtgaatt tttgtttttg attctaaaat ttttagattc atctattaat
    14281 ctctccaatc cacctaagca cactaccttt atcatcaatt tctacttcta aatctttgta
    14341 tttgttataa attctaggtt ctaaaatttc acggagatat ttcgtgcctt tctctgttct
    14401 tgctacccaa aatctatatc tatcccaata ttgtggcgta ttccaagaag aataaacata
    14461 atcatcatca ctcatatctt tatagggttc tttaacttcc attatatccc tacaataagc
    14521 ttctgtataa aagaaattat ctctaaaata aatccaagct tggtatttat caccttgatt
    14581 ggaaagtaaa ttttcctcct tattttgcaa accacacata ccaaattcta tataacctgc
    14641 taggaaaagt tgtcctataa tgcttacata ctcgctattg taattcggtt ttatggagtt
    14701 ttttaagttt tcatcttctg taaaaaacaa aggaaaacat gtatcattaa attcgcaccc
    14761 atcttgcaga gttgatccta aaaaatgatc ttcaaaatat tctaaaatat cggttttttt
    14821 aatatttgga atttgtagaa aaaagagcat ttcccaatca ccacgataaa tctcatattt
    14881 tattttataa aatatctcat caaaatcagg aaaaaatgag ccgtatttat gaattacttt
    14941 accaatcgcc atttttatct ttcatctatt aatctctcca atccacctaa gtatattacc
    15001 cttatcatca atctctactt ctaaatcttt gtatttgttg taaaatttag gagctaaaat
    15061 ttcattaaag tattttgtgc ctttgggggt tgttgctacc cagatattgt attgtgacca
    15121 atattgtggc gtatcccaag aaacatcatt taaaataaga ctatatccac tctcgtctaa
    15181 tgtttcagga tcgtccaaat ctctaataaa tttgtcttga taaaagaaat tatctctaaa
    15241 atatatccaa gcttggtatt tatcttcttt ataataagat aagtttgagg gatagtctat
    15301 tttatttcta tcttcttcat cgcaataaga accaaagtct atatatcctg ctaagaatag
    15361 ttgtcctaag atgtttatat attcacttat ataggtaggt ttgggtgtat ttaaagagaa
    15421 agggttgcta agattgtcaa tgttacaagt acccaataaa attaaatcat tacattccca
    15481 tcttgatgcg cccatgcttt ttccacaaat aaataaaata taatactcaa ataactctaa
    15541 aatatccatt tttgttatca ggcaagaaga tataattaaa gagggattat tgtaggcatt
    15601 ttcttttaat tgtgttttct tccataagct ataatctata tcaggaaaaa atatagcaca
    15661 tttttcttct ttattccatt tgatataatt atacttcatt tttcacccca ttttctatat
    15721 gtattgttct aagatttcct cttggtttat tagaatttac ctctatggtc ccacctccac
    15781 ttttagaagc ttttttatat tgtataatag tttgatcatc taattttctc atttttatag
    15841 tacctccaag tttatcttga tttatatctt ttaatatgtc tgccccatct gcaatctctt
    15901 cccaaatttc ttttatttgt ttattatcct taacccagaa aacattcttg cttctaccaa
    15961 gtcctaattc tttagaagtc ttaagattgt atttattttt taacacctct atcacttctt
    16021 gtttagtggc atatttggat tttttcttaa taatattttt tgaattttta ggatttttca
    16081 ctgcaccaag cattgctaag gcatcaccga taatgctgac attttcaagt gaatttgaaa
    16141 tatcttacac tataccttct aatggggtaa ataaaggctt tatggctccg cttgatgatt
    16201 tttcccattc tttaaattca tcaaatatta tctcaataaa ctctccacta ccatcttgtg
    16261 tttgtattct tataacatta tcagggatga tttcttgagt attgttatag ttttcattgg
    16321 tgtgagcttg tgtggtattt gtatcatctt ttatattatc acttataagc atatctttat
    16381 catttgcgtt aaaataatcc ttagtataaa cattaaagca acacacattt tcattatcaa
    16441 gccactcatc taaacctttt gcaatttcaa aaccaatctt ttgcatttta gcaggagcta
    16501 aaaaaactct atgatggatg atgttttcat tttctctata atctttatca tattcatgta
    16561 gctgtgtaaa ataccctact cctagatcct tgtttttaaa ttctttataa gcacttttat
    16621 aaactttggc aatgtttttg gggataacaa agattaattt taacaaatgc ataccaagtc
    16681 taatctcaca ctctttaaat tcataatctt tactaaagtc ttgtttaaga gtatttagta
    16741 cattaatatc atttagattg aataaatcat ttttagataa ttctaattta tctaaacctt
    16801 gttcgttttg atatagggta tcgtttagat ataaattagt gaaaagattg tctttttgat
    16861 atttgtgctc tttataatac attcttaatc tagcttcttt taactctatt tgatttttgc
    16921 tttgttctcc taagccctcc tcaggatcaa agctgtgatc aaatttaaac ttagtagggg
    16981 taaagcttac ttttaaagca aagcctttat ctgttttaca agctgagatg agttcttgta
    17041 atatagcgta ttctccattt actttctttt gagataagga gcctttaata tccactacct
    17101 tagtacaagg ataacttaca ttagctatag tgtgaggaca agctactata ctagagttta
    17161 ataaatcact ttctagcatt atagggatac catcactttt aaaggatttt cctttgtttg
    17221 atttaagtat gactttgcct ccatggatac attctaggtt ttgattttct aaaagagcgt
    17281 gaagtttggc tatgctttgt tttttatcta cttgtgtggt tttttgttct tttagagtgt
    17341 ttgaaattaa atctttgtat tctaagcttt gttttcttaa gcattctaat ttgatattta
    17401 aagaattttc tataatagaa taattaagca agcaaagttc atcattttta taaaagatac
    17461 taagtcttcc taaaccactg ccttcatctt taggagaaaa ataataactg ggtatatctt
    17521 gttttataag attatcttga tctaattctc caaagtaaaa aggattatta ggaagttcgg
    17581 tggagcctgt aaggagggtg gagtttcgga agatataagc ttgatagctt tggagttctt
    17641 caaaagtaaa atctgtcgtt gcttctaatt tataaagttc ttcataaatg ctttgacaat
    17701 caatgatgct tttattttca caaaataaat acttttttat ctttatgaat agaatataaa
    17761 aagtctctac ctatcataat tttcctaaat aatacctatt ttggcttttc cactaaaata
    17821 taaagcttgc gatattttac aaactctacc taaataccgc tcatcccaaa tttgatcttt
    17881 tagcctataa acttttgaat tatatccata tatttttgtt atattgttaa tattttcaag
    17941 acatttcata tctttataaa ctgcaatgaa aattctaaat tccccaatgg caattttatg
    18001 ggctaaattt tcttgattgt taataaagga acaatctttt ctgtatttat taaaatcatt
    18061 tttatcaaga attaaaatat atttttcttt ttcttacacc tttaaaataa aatctataat
    18121 ttctgtttaa ctaataatag gaactttata acttgtataa taactatctc caagctcttc
    18181 taaaatacca ttggtttctt gcattatagt ggctattaat gaaagagaat actcaaagtg
    18241 gttaatcttt tctggatggt ttttattgaa cccaaaagag ctatttttat tagtagcatt
    18301 attttttaac acaaaagttt ctgtataaat ttgaatattt ttcataaaat gattaagata
    18361 ctctatacac tcactaaggc ttttatcttt aactttgtta tagttagcat ctaattctaa
    18421 aagataagaa taaaaataga gagtattaac aagaggtttt atggagtgat cgttttttcc
    18481 tgtatatata cctaaggcat tataattaag cctatgcttc caagaaagac taaaaacctt
    18541 aaaacgcttt ttgtagattt aaagatgat
//
LOCUS       DBBXOW010000034        17759 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.035, whole genome shotgun sequence.
ACCESSION   DBBXOW010000034 DBBXOW010000000
VERSION     DBBXOW010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17759
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.035"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..734)
                     /gene="trpA"
                     /locus_tag="ACJE1S_001084"
     CDS             complement(<1..734)
                     /gene="trpA"
                     /locus_tag="ACJE1S_001084"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HGG0806636.1"
                     /translation="MVDFTKFYKDKANVAYMVLGYPNLKISEEFLKRLDESSIDVLEL
                     GIAYSDPIADGEIIANAAKIALEQGADIHKIFELLAKIKTKKALVFMVYYNLIFSYGL
                     ENFVKKAKALGISALIVPELSYEESKPLYKECQKYDIALITLVSITTPKERVKELVKN
                     AKGFIYLLASVGITGGQSADNKLLQEKIQEIRSFTQLPIYVGFGVKNNTDVRNMRKLA
                     DGVIVGTNIVKLFASNDVNQILKGVE"
     gene            complement(727..1905)
                     /gene="trpB"
                     /locus_tag="ACJE1S_001085"
     CDS             complement(727..1905)
                     /gene="trpB"
                     /locus_tag="ACJE1S_001085"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HGG0806637.1"
                     /translation="MKKAYYGEFGGQFLPESAMFALNELEDAFLKFAQDKAFKKELQG
                     LLTTYVGRPTPLYFARNLSKKYGHEIYLKREDLNHTGAHKINNAIAQSLLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKVNAIQSGL
                     KTLKEATTAAIQAWVGDIKNLFYVVGSAVGPYPYPKMVTHFQSVIGKECKSQLKKLGK
                     KVDYIIAAVGGGSNAGGIFYEFIKDESVNLIGIEAGGLGVDTLYHAATLTKGKTGIIH
                     GMKTKVLQDELGNILPVHSVSAGLDYPGIGPLHAFLSQSGRAKYYAITDEECMMALKM
                     LCKEEGIIPAIESSHALAFLEKLCPKLNKKSVIVVNLSGRGDKDMQTIREYKKGTIYG
                     "
     gene            complement(1902..2501)
                     /locus_tag="ACJE1S_001086"
     CDS             complement(1902..2501)
                     /locus_tag="ACJE1S_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HGG0806638.1"
                     /translation="MTKLKICGIKDENNAKEIAELNVDFMGLIFAKSPRQLSLEQAMN
                     LSDIIHAGFKKSVGVFVDENLEFILKAIKQAKLDGVQIHRKISEFEFKTLKESGVFVW
                     QVLSVGDRLELEENIYADLILFDTKGKFHGGNGESFNWDLLKDFKKDFALAGGIGTHN
                     INEALSLKPKIIDLNSKIEKENHLKDVEKIKYILKEMRK"
     gene            complement(2488..4080)
                     /gene="trpD"
                     /locus_tag="ACJE1S_001087"
     CDS             complement(2488..4080)
                     /gene="trpD"
                     /locus_tag="ACJE1S_001087"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HGG0806639.1"
                     /translation="MILLIDNYDSFVFNIKSMLENVYKGEILVVRNDKITLDEIKALN
                     PNYIILSPGPKHPKDSGVCLEIFKSRLNIPTLGICLGHQALGFSFKAEIAKLQNPMHA
                     KNSLIKIYNKDTIFKDFEDEVSVMRYHSLEVKNLPDDFEILALSDDNVIMAIKHKTLP
                     YFGVQFHPESYFSEYGIKIFANFLNQEKAVQDKKHTLGFYLQKMSENHYLESEDFSEI
                     CKIIMSRDYEPLQAAALLVLISEKSLNQKSLSSLVREILRYSKTFSDESDMIDICGTG
                     GDNFKSINVSTASAFILAALGAKVAKHGNRAISSSSGSTDVLDALDVKIPDNLECALN
                     DLQNKNLAFFHAPYFHPLVGELRELRAKLGIRTVFNVLGPLLHPNLKLKYQMMGNYHA
                     PVHKLLAEVLRSLGRKRALVVRGNDGMDEISICDETKIFEVREGEIYEYGVTPEQFGF
                     KRAFHSEIMGGNAYENAKDLKDILSGKIQGAKFDIVVLNSMFALYTANKVSTPLKAKD
                     IILEAIYSGKVMEYFRSLNDKA"
     gene            complement(4082..5323)
                     /locus_tag="ACJE1S_001088"
     CDS             complement(4082..5323)
                     /locus_tag="ACJE1S_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HGG0806640.1"
                     /translation="MLEMKANLYYRQILKEFPSSYFAEDSTRVIIGIDCDFYDAKDIT
                     LSELKAKFYENASREQICKYSGFFGVFSANFISLFENLPSNENKNYDFPNFLFANAKA
                     YLVYEKTSKMFFKYGENKYFDFLKEDFVFDKKVCEYKILQDFQEEKRDFIQSVEKAKE
                     YLLSGDIFQVVLSKQLCIEHNFDSFEFYETLSELNPSAYMFYFPTQYGVVLGSSPEFL
                     LKIKNKEIFLAPIAGTRNLDENSDILKLEKDLLSDEKELSEHKMLVDLARNDASKFGT
                     NTRVENLFSITRNKFVMHIVSEVYATMDKQANIFDIIGAVFPAGTLSGAPKIRALEII
                     NELENLDRGVYGGAVGFLNFNEDVVLAIIIRSAFFKENKAFIASGAGIVLQSDPQKEY
                     EEICAKRKALLVSFEKMAKRS"
     gene            5708..6493
                     /locus_tag="ACJE1S_001089"
     CDS             5708..6493
                     /locus_tag="ACJE1S_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG0806641.1"
                     /translation="MNFADLPYIFIGIFSGITSGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAIFGSYINYKKKNLNLKDGIVIGLGGLLGASFSGILLQALSDVALTA
                     IFLGVSCVFFIKYAFGIKESVVKSHKSVWVKNGILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASISGIISFANSGVIDAEVIHKGVLVGFASMIGV
                     FIGIKIIEKMHISAHRKILLCVYALSILATTLSLLRKLGILAF"
     gene            6581..9403
                     /gene="uvrA"
                     /locus_tag="ACJE1S_001090"
     CDS             6581..9403
                     /gene="uvrA"
                     /locus_tag="ACJE1S_001090"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HGG0806642.1"
                     /translation="MNDTIKIIGAKENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVGEILKFPKGAKIIIYAPLVREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEDIELSKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLEESFGEIEIEVLNPDEVGLNKHYHFSEHSACFACKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDESLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKLPFAELSEEQKRLVLYGNAKTIDFFWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCAGHRLKPESLAVKVASKGLGEILDMSIEDSTSFFANKKNFSYLSEQERL
                     ISEPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFAGTYKELLKSKSETALYMNGKKQISQLQNREQKEWLELKNVNINNIKDLSVSFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCHGKRYNDATLEIKYKGKNISEILNMSVLEASEFFAAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKIISTGSVE
                     KVAKDHKKTKSYTGYYLDLELKNAKS"
     gene            9405..9938
                     /locus_tag="ACJE1S_001091"
     CDS             9405..9938
                     /locus_tag="ACJE1S_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806643.1"
                     /translation="MTQEQKISFFKIKRLSIYIFFCALYNFFYFFSYENVGSLHCEFL
                     CISGRFLCFFSWIYIVLAFIFMVARIYFLFSSKKILIYFLLAIISLGSSFFLLENKIL
                     FLGLLALFFVFYFLFSLTLASLFKEVKMSFYFVFLCMLLAFLFFEKLSFLFFFLALHF
                     LTFAYAFDRYETLKKLY"
     gene            9960..10637
                     /locus_tag="ACJE1S_001092"
     CDS             9960..10637
                     /locus_tag="ACJE1S_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806644.1"
                     /translation="MSNLNFHQMFEIQRQNDFKSIKKLAWVVFISFLLCVCFQFLPII
                     LDFAYDLKLLKFNSNTNILAMVFNAIFLISYLIMILKLYFVSQSKVLLISFFIAAFTQ
                     FIALLSLNYLIASPVVDKILRIFLYGFSFLCLAIAIFCTFIFFKTLKTLCENKIYFKL
                     CFIFKSAILIIIYILMFVLIYSEHSLALIIAYFMIFFFAGLLFTIYYALFAFALSKNQ
                     NIKLSQT"
     gene            10650..11240
                     /locus_tag="ACJE1S_001093"
     CDS             10650..11240
                     /locus_tag="ACJE1S_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806645.1"
                     /translation="MKKKIFKFSILFTIFISLSQSTLVFIFNHYLIIDYSAYETLPQS
                     FAMLNLADQKLYHLTQNLRFLHSILAFLLIISFFFVHLFFFYISRKEKFIPYSFFCFV
                     LMVISAIANLLEGIEQKESIFWYYKAFLDVGVCLIYLLFLDKFFQSHLFKIFFVCACL
                     CTILTKFKFMDFTTPFVLPIYLFILLILMRKKSFNV"
     gene            11233..11676
                     /locus_tag="ACJE1S_001094"
     CDS             11233..11676
                     /locus_tag="ACJE1S_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HGG0806646.1"
                     /translation="MFDFLYNDISYLGLFIVCFLSSTLLPLASEAFVVAFIKLDFNAH
                     LVLFIATLGNTLGSLSTYALAYLGKEKILEKYFSKSLKKLDKFNANFTKFGSLYAFLT
                     FLPLIGDIFALGLGFAKYPFIKACFFISLGKLSRYIFIIFIANSL"
     gene            11740..14379
                     /gene="polA"
                     /locus_tag="ACJE1S_001095"
     CDS             11740..14379
                     /gene="polA"
                     /locus_tag="ACJE1S_001095"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HGG0806647.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEYKSDYIIFALDSKGKTFRSDIDPNYKKNRTPPPPELLEQIPICIEMIEKMGFMSA
                     SYEGYEADDIIASVVKTCKDKDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEEA
                     CFEKYGVKPYQIKDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRKLLLEGKENAFLSKKLASLYEDLEVSNLLEKADFPQDEPLLKILEILEHYELN
                     VLLKKLRQNPDNKDKNLGFKATLIQDEDKLFEILNSLEQESIIAFDTETTSIDTKEAK
                     IVGFSFCMSENEAFYVPLTHNYLGVGKQVSLQSAKKAIELIFKHFIIGHNLKYDFKII
                     ENNFKLSLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLEPHLLDLAKNYEFDFIKIIMMMEENGIKLDT
                     HALEILMKKFESEIKILSEEIYALCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNELLDKHPVISKILDYRELAKLYSTYCEPLLKLALKDENSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFIAKEGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFKNDEDIHARTAIMIFGESNYETRSIAKSINFGLIYGMGYKTLSKNLKIEANLAK
                     TYIEKYFENFTSIKSYFEKVKNEAKANGFISTLSGRKRYFDFENAKPMQVAMYERESI
                     NSILQGSAADIIKFAMLEIAKILNQDKRLILQIHDELIFEVKDELCENFVKKTSDIME
                     NIVKLKVKLKTSSSIAKKWGDLK"
     gene            14395..15171
                     /gene="motA"
                     /locus_tag="ACJE1S_001096"
     CDS             14395..15171
                     /gene="motA"
                     /locus_tag="ACJE1S_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HGG0806648.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVIHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKIVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNE
                     IENEFLRNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIIFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            15174..15905
                     /gene="motB"
                     /locus_tag="ACJE1S_001097"
     CDS             15174..15905
                     /gene="motB"
                     /locus_tag="ACJE1S_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HGG0806649.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTATQTVQQETQDTYKYKGSQEEKEDELSKLKQMAVNQQEVIKKL
                     QAALDQSENQEILNLPSKVEFERGSAQIVSADIQDYLKRIAQLISYLPPQIEIEIRGY
                     TDNSDSALRSYDLGYTRAENVLKYLIEGGVSTKNINLKSYGLNSPINGNPQALENNRV
                     QIYFKVDIKDNDAKQSVLDLIEKSK"
     gene            complement(15920..17008)
                     /gene="flhB"
                     /locus_tag="ACJE1S_001098"
     CDS             complement(15920..17008)
                     /gene="flhB"
                     /locus_tag="ACJE1S_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HGG0806650.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIVGFVI
                     TLFMMGFIGERITNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLILLAPIVLSIMIAG
                     ILGNVMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKLVESVKIVLKVGVVFTVAFI
                     VLLKFMQELPLVERYNIIGQLIWLRDRAIILAAIVIIAFLVIAVLDIFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTTKEQAPRVVAKGVDFLALRIKQVAYDNNVVVYENPPLARELYKACDINDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKNN"
     gene            complement(17130..17726)
                     /locus_tag="ACJE1S_001099"
     CDS             complement(17130..17726)
                     /locus_tag="ACJE1S_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HGG0806651.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVEDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMIRMVDTML
                     FTNEHGEVCPAGWNKGDAGMKANPKGVAEYLDKNEDKL"
BASE COUNT         6032 a         2930 c         2672 g         6125 t
ORIGIN      
        1 tcttctacac cttttaaaat ttgatttaca tcattgcttg caaaaagctt tactatattc
       61 gttcctacta tcactccatc ggctagttta cgcatatttc ttacatctgt gttatttttt
      121 accccaaaac caacataaat aggcagctgt gtgaaagatc ggatttcttg tattttttct
      181 tgcaaaagtt tattatccgc actttgtcct cctgttatgc ctacactagc aagtaaataa
      241 ataaaaccct tagcattttt tacaagttct ttaacacgct ctttaggagt tgtaatgctt
      301 acaagagtaa tcaaagctat gtcatacttt tgacattctt tatacaaagg cttactttct
      361 tcataactta gctcaggaac tatcaaagca gaaattccca aagccttggc ttttttaaca
      421 aaattttcta agccgtagga aaaaattaaa ttataataca ccataaaaac aagggctttt
      481 tttgttttta ttttggctaa aagctcaaat attttatgaa tgtctgcgcc ttgttctagg
      541 gcaatttttg cagcattggc gatgatctca ccatcagcaa taggatcact atatgcgatt
      601 cctaattcca aaacatcgat cgaactttca tccaaacgct ttaaaaactc ttcactaatt
      661 tttaaatttg gatagcctaa aaccatataa gctacatttg ccttatcctt gtaaaatttt
      721 gtaaaatcaa ccataaattg ttcctttttt atattctcta atcgtttgca tatctttatc
      781 gcctctacct gataaattaa ccactatcac gctctttttg tttaacttag gacaaagttt
      841 ttccaaaaat gccaaagcat gagaactctc aatagcaggg ataatcccct cttccttaca
      901 aagcattttt aaagccatca tgcattcttc atcggtaatg gcataatatt ttgccctacc
      961 gctttgagat aaaaaagcat gcaaaggacc aattcctgga taatcaagtc ctgcagaaac
     1021 actatgcaca ggtaagatgt ttcctaattc atcttgcaaa accttcgttt tcataccatg
     1081 gataatacct gtttttccct tggttaaagt tgctgcatga taaagggtgt caacacccaa
     1141 tccccctgct tcaattccaa taagatttac actctcatct ttgataaatt cgtaaaaaat
     1201 tccacccgca ttacttccac ctcctactgc agcgatgata taatctactt ttttacctaa
     1261 ttttttaagt tgacttttgc attcttttcc tataacactt tgaaaatgtg taaccatttt
     1321 aggataagga taaggcccta cagcacttcc aactacataa aaaagatttt taatatcccc
     1381 cacccaagct tggatagcag cagttgtagc ttcttttaag gttttaagtc cactttgtat
     1441 agcattaacc ttagctccta aaagctccat tttataaaca tttaaagctt gtcgttgcac
     1501 atcagtcgct cccatgtaaa tttcacactc aagtcctaaa agtgctgcag cagtagcagt
     1561 tgctaatcca tgctgccctg cccctgtttc ggcaatgatt tttttcttac ccattttttt
     1621 tgctaaaagt gattgagcta tagcattgtt gattttatgt gctcctgtat ggtttaaatc
     1681 ttcacgctta agataaattt catgtccgta ttttttactt aaatttcgag caaaataaag
     1741 cggagtgggg cgtcctacat aagtagttaa aaggccttga agctcttttt taaaggcttt
     1801 atcttgtgca aattttaaaa aagcatcttc aagctcattt aaagcaaaca tcgcactctc
     1861 aggcaaaaac tgcccaccaa attcaccata atacgccttt ttcattttct catctccttt
     1921 aaaatatact tgattttttc cacatctttt aaatgatttt ccttttctat ctttgaattt
     1981 aagtctatga tttttggttt taaacttaaa gcttcattga tattatgagt tcctatgcct
     2041 cctgctaagg caaaatcttt tttaaagtct ttcaaaagat cccagttaaa actttcccca
     2101 ttgcctccat gaaattttcc cttagtatca aataaaatta aatccgcata aatattttct
     2161 tccaattcca aacgatcccc tacacttaaa acctgccaaa caaaaactcc actttctttt
     2221 aaggttttaa actcaaattc actgattttt ctatgaattt gcactccatc aagctttgct
     2281 tgtttgattg cttttaaaat aaattccaaa ttttcatcga caaaaactcc tacactcttt
     2341 ttaaatcccg catggatgat atcgcttaaa ttcattgctt gttctaaact aagctgtcta
     2401 gggctttttg caaaaataag ccccatgaaa tcgacattta attcagcgat ttccttggca
     2461 ttattttcat ccttaatgcc acaaatttta agctttgtca tttagactcc taaaatactc
     2521 catcaccttg ccagaatata tagcctctaa aataatatct tttgctttta aaggtgttga
     2581 aactttgttg gctgtataaa gtgcgaacat agaatttaaa accacgatat caaatttagc
     2641 cccttgtatt tttccactta agatatcttt taaatcctta gcattttcat aagcattgcc
     2701 acccataatc tcactatgaa aagctcgctt aaaaccaaat tgttcgggtg taacgccgta
     2761 ttcataaatt tcaccctctc ttacttcaaa aatctttgtt tcatcgcaaa tactgatctc
     2821 atccatgcca tcattgccac gcaccaccaa agctcttttt cgtcctagtg atcttaaaac
     2881 ttcagccaaa agcttatgca caggtgcatg ataatttccc atcatttgat atttaagctt
     2941 taaattagga tgaagtaaag gtcctaaaac attaaataca gttcttatgc caagctttgc
     3001 cctaagctct cttagctcac ctactaaagg atgaaaatac ggggcatgaa aaaaggctaa
     3061 atttttattt tgcaaatcat ttaaagcaca ttctaaatta tcaggaattt ttacatctaa
     3121 agcatctaaa acatcggtgc ttccacttga actagaaatc gctctgtttc catgttttgc
     3181 tacttttgcc cccaaagctg ctaaaataaa agcacttgct gttgaaacat tgatactttt
     3241 aaaattatct cctccagtac cacatatatc tatcatatcg ctttcatcac taaaggtttt
     3301 agaataacgc aaaatttcac gcacaagact gcttaatgat ttttgattga gggatttttc
     3361 actgattaaa acaagtaaag cagccgcttg taaaggctca taatccctgc tcataataat
     3421 cttgcaaatt tctgaaaaat cttcactttc taaataatga ttttcactca ttttttgcaa
     3481 ataaaatcca agagtatgtt ttttatcctg aactgctttt tcttgattta aaaaattagc
     3541 aaaaattttg attccgtatt cgctaaaata actttcagga tgaaactgca cgccaaaata
     3601 aggtaaagtt ttatgtttta tagccatgat aacattatca tcactcaaag ccaaaatttc
     3661 aaaatcatcg ggcaaatttt taacttctaa agagtgataa cgcatcacac ttacctcatc
     3721 ttcaaaatct ttaaaaattg tatctttatt ataaatttta attaaggaat tttttgcatg
     3781 catagggttt tgcaatttag caatttcggc cttaaaacta aaacccaaag cttgatgtcc
     3841 taagcaaatt ccaagcgtag ggatgttgag tcgtgattta aaaatttcaa gacacactcc
     3901 actatctttt gggtgttttg gaccaggact taaaatgata tagtttggat ttaaagcttt
     3961 gatttcatca agagtgattt tatcgtttcg aacaactaaa atttcaccct tgtatacatt
     4021 ttcgagcatg gatttgatat tgaaaacaaa agaatcataa ttatcaatta aaagtatcat
     4081 cttaactcct tttagccatt ttttcaaaac ttactaataa agctttacgc ttagcgcaaa
     4141 tttcttcata ttctttttgt ggatcacttt gtaaaactat acccgctcca cttgctataa
     4201 aagctttatt ttctttaaaa aaagccgatc ttatgataat agctaaaacc acatcttcat
     4261 taaaatttaa aaacccaaca gcgcctccat aaactcctct gtctaaattt tcaagctcat
     4321 tgataatttc taaagctcta atctttgggg caccacttaa agttcctgct ggaaaaaccg
     4381 ctcctataat atcaaaaata ttggcttgct tatccatcgt cgcataaact tcactgacta
     4441 tatgcatgac aaatttattt cttgttatac taaaaagatt ttcaactcgc gtatttgtac
     4501 cgaatttaga tgcatcattt ctagctaaat caacaagcat tttatgctca ctcaattctt
     4561 tttcatcgct taaaagatct ttttctaatt ttaaaatatc tgaattttca tccaaatttc
     4621 gagtacctgc tataggagct aaaaaaattt ctttgttttt tattttcagt aaaaactctg
     4681 gagaagaacc caacacaacc ccatattgag tcggaaaata aaacatataa gcactaggat
     4741 ttaactcact taaagtttca taaaattcaa aactatcaaa attatgctct atgcaaagct
     4801 gcttgcttaa aaccacttga aaaatatctc cgcttaaaag atattccttg gctttttcca
     4861 cactttggat aaaatctctt ttttcttctt gaaaatcctg caagatttta tattcgcaaa
     4921 cttttttatc gaaaacaaaa tcttctttta aaaaatcaaa atacttattt tctccgtatt
     4981 taaaaaacat tttgctagtt ttttcataaa ccaaataagc tttagcattg gcaaataaaa
     5041 aatttggaaa atcataattt ttattttcat ttgagggtaa attctcaaac aaagaaataa
     5101 aatttgcact aaaaacacca aaaaatccag aatatttgca aatttgctcc cttgaagcat
     5161 tttcataaaa tttcgccttt aattcgctaa gagtgatatc cttagcatca taaaaatcgc
     5221 aatcaatacc tataataacc ctagtagaat cttcagcaaa gtaagaagaa ggaaattctt
     5281 ttaaaatttg cctataatat aaatttgctt tcatttcaag cataatacaa cctttataaa
     5341 aaataaaata aaaaaatatt gagaagttaa aaaaagaagc ttagaagcgc caaaaacgaa
     5401 gagtgtgtgt tgatactaaa attaaagaat tatttaaaaa atcgttttta ttcatcttct
     5461 acctttcaaa aaattaagcc tcattttaaa ctatgatgac ttttattaat tttagagaaa
     5521 aaaacataaa attatccttt aatatttatt tcattttcaa aaaaataaat ccatgtaact
     5581 ctgtggaaaa tattttgtca aaataagcct tgtaaaacat tataaaaaat tttaaaacta
     5641 agataagctt gataagataa aattactcct tatttaatca acaaacgata taaatttagg
     5701 aaaaagtatg aattttgcag atttgcctta tatctttata ggtatatttt caggtattac
     5761 ttcaggactt tttggcatag gtgggggaat gattatcgtg ccctcaatgt ttgctttagg
     5821 agcaagtgct catcatgcta ttggaatttc tgtattacag atgatctttg cggccatttt
     5881 tggttcttat attaattata aaaaaaagaa tttaaatctc aaagatggta ttgttatagg
     5941 actgggcggt cttttggggg caagttttag tggaatttta ttacaagcct taagcgatgt
     6001 agctcttact gctatatttt taggagtaag ttgtgtattt tttatcaaat atgcctttgg
     6061 catcaaagaa agtgttgtaa aaagccataa aagcgtatgg gttaaaaatg gaattttatt
     6121 tatagcggga gcttttacgg gaatttttgc tatttcttta ggtataggcg gagggctttt
     6181 aatcgctcca attttagctt atttcttagg ctatgatagc aaaaaagtgg tttcgctttc
     6241 tttatttttt gttatttttg cttcaatctc tggtatcatc tcttttgcaa attcaggtgt
     6301 aattgacgct gaagttatcc acaaaggtgt tttagtaggt tttgcttcta tgataggtgt
     6361 ttttataggt ataaaaatca tagaaaaaat gcatatttca gctcatagaa aaattttact
     6421 ttgcgtatat gctttatcca tacttgcaac cactctttct ctgcttagaa aacttggaat
     6481 tttagcattt taatccatta aaatgctaaa aaatttaaaa acataatttt tatattttta
     6541 tgttaaaatg ttaaatttat ttaatgctta ggaaaaactt atgaatgata cgataaaaat
     6601 cattggcgca aaggaaaata atcttaaaaa tattcatctt gaaattccaa aaaataaact
     6661 cattgttttt acaggattaa gcggtagtgg aaaatcaacc cttgcttttg gcacactcta
     6721 tgccgaaggt caacgccgtt atatagaaag tttgagtgct tatgcaagac aatttttaga
     6781 caaggtaggc aaacccgatg tggataaaat cgaaggttta acccctgcta ttgcgattga
     6841 tcaaaaaacc acttctaaaa atccgcgttc tacagtcgga accatcactg aaatttatga
     6901 ttatttaaga cttttatatg caagagtggg cattcagcat tgccatcaat gcggacaaaa
     6961 aatctcatct atgagtgcaa gtgatatagt aggagaaatt ttaaaatttc caaaaggagc
     7021 taaaatcatc atctacgctc ctttggtgcg tgaaaaaaaa ggaacttatg cggatttact
     7081 tgaaaatttg cgcaataaag gctatgtaag agcgcaaatt gatggggttt tagtaagact
     7141 tgatgaagat atagaacttt caaaaactaa aaaacatacg ataaaactcg tcattgatag
     7201 actcgaaata caagaagatc tactttctcg ccttgcaagc gatatagaaa aaggtttgga
     7261 agaaagcttt ggagaaatcg agatagaagt cttaaatccc gatgaagtag gacttaataa
     7321 gcactatcac tttagcgaac actccgcttg ctttgcttgt aaaatttcct ttgttcctct
     7381 tgagccttta agtttttctt ttaactctcc aaaaggggct tgtgaagcct gtgatggact
     7441 tggaattcgc tataccctag atatgaaaaa aatcatcgat gaaagcctaa gtcttgaaaa
     7501 tggcgcggta aaaataatgt atggatttaa caaaagctat tattataaat ttttaattgc
     7561 tttttgcgag caaaatgaaa ttcctattaa actccctttt gctgaactta gcgaagaaca
     7621 aaaacgcctt gtgctatacg gaaatgcaaa aaccattgac tttttttgga aaagaaatcg
     7681 cctcaaacgc acctttgaag gtgtggtaaa aatggcttat gaaatgctaa aagatgaaaa
     7741 agacttagca gaatacatga gtgaaaaaat ttgcaaagat tgtgcaggtc atcgtttaaa
     7801 acctgaaagt ttagccgtaa aagtagcctc taaaggacta ggcgaaattt tagatatgag
     7861 tatagaagat agcactagct tttttgcaaa taagaaaaat ttctcttatt taagcgagca
     7921 agaaagactt atctctgaac ccatattaaa agaaatcaac gaaagacttt tctttttata
     7981 tgatgtagga ctaggctatt tatctttagg acgcgatgca aggacgatta gcggaggtga
     8041 ggcacaaaga attcgcatcg cttcacaaat tggcagtggt ttaagtgggg tgatgtatgt
     8101 tttagatgaa cctagtatcg gacttcatga aagagataca gcaaaactca ttaaaacctt
     8161 aagaaattta caacaaaaag gcaatactct aattgtcgta gagcacgata aaatgactat
     8221 agaagaagct gattttatcg tagatattgg cccaaaagca ggaaaatttg gaggcgaagt
     8281 ggtatttgct ggaacttata aagaactttt aaaaagcaaa agtgaaaccg cactttatat
     8341 gaacggcaaa aagcaaattt cacagcttca aaacagagaa caaaaagaat ggctagaact
     8401 taaaaatgta aatatcaata atatcaaaga tctaagcgtt tcttttcctt tgcaaaattt
     8461 agtcgcgatc acaggtgttt caggatctgg aaaaagctct ctcatacttc aaaccttact
     8521 gccttttgca caagaagaat taaaccgcgc caaaaaagta aagaaattag gtggggtgca
     8581 gattgaaggg cttgaaaaac tagataaggt tatttatctt gatcaaagtc ctataggacg
     8641 aaccccgcga tcaaatcctg ctacttatac aggtgccatg gatgaaattc gcaatctttt
     8701 tgctgctacc aaagaagcta aaatgcgagg ctataaagcg gggcgttttt cttttaatgt
     8761 taagggtgga agatgtgaga aatgcagtgg cgatggagag attaaaatag aaatgcactt
     8821 cttgcccgat gtaatggtgg tttgcgatac ttgccatggc aaacgctata atgatgccac
     8881 actagagatt aaatacaaag gtaaaaatat cagtgaaatt ttaaatatga gcgttttaga
     8941 agcaagtgaa ttttttgcag ctgtgccaaa aatcaaacaa aaacttgata ccttagtaaa
     9001 agtcggactt gattatctta ccctaggaca aaatgcaacg actttaagtg ggggtgaagc
     9061 gcaaaggata aaacttgcaa aagaattaag ccgcagtgac acaggaaaaa cgctttacat
     9121 acttgatgag ccgaccacag ggctacattt tgaagatgtc aataaactca ttttagtttt
     9181 acaacactta gtcgatctta aaaattctgt ttttgtgata gagcataatt tagatgtgat
     9241 taaaaatgct gattatatta tcgatatggg tccagaaggc ggagtaaagg gtggaaaaat
     9301 cattagtaca ggaagcgtgg aaaaagttgc aaaagatcat aagaaaacaa aatcttatac
     9361 aggatattat ttggatttag agcttaaaaa cgcaaagagt taaaatgaca caggaacaaa
     9421 aaatatcatt ttttaagatt aaaagattaa gtatttatat atttttttgt gctttatata
     9481 atttttttta ctttttttct tatgaaaatg tgggaagttt acattgtgaa tttctttgta
     9541 tcagcggtag atttttatgc tttttttctt ggatttatat agttcttgct tttattttta
     9601 tggtggcaag aatttatttt ttattttctt ctaagaaaat tttaatttat tttttgcttg
     9661 ccattataag ccttggctca tctttttttc ttttggaaaa taaaatttta tttttagggc
     9721 ttttagcttt atttttcgtt ttttattttt tattttcact cactcttgct tcgcttttta
     9781 aagaagtgaa aatgtccttt tattttgtgt ttttatgtat gcttttagca tttttatttt
     9841 ttgagaaatt aagcttttta tttttctttc ttgctttaca ttttttaact tttgcttatg
     9901 cttttgatag gtatgaaact ttaaaaaagc tgtattgagt tcaattttaa aggaaaaaaa
     9961 tgtcaaattt aaactttcat caaatgtttg aaattcaaag acaaaatgat tttaaaagta
    10021 tcaaaaagct tgcgtgggta gtttttataa gttttttact ttgtgtttgt tttcagtttt
    10081 tacccattat tcttgatttt gcctatgatt taaaattgtt gaaatttaat tctaacacta
    10141 atattttagc tatggttttt aatgcaattt ttttaatttc ttatttgatt atgattttaa
    10201 aactttattt tgtaagtcaa agtaaggttt tattgatcag tttttttata gctgcattta
    10261 ctcaatttat cgctttatta agcttgaatt atcttattgc tagtcctgtt gttgataaga
    10321 tattacgtat ttttctatat ggcttttctt ttttatgtct tgcaatagcc attttttgta
    10381 cttttatatt ttttaagact ttaaaaactt tatgtgaaaa taagatttat tttaaacttt
    10441 gttttatttt caaaagtgcg attttgataa ttatctatat acttatgttt gttctaattt
    10501 atagcgagca ttctcttgct ttaattatcg cttattttat gatttttttc tttgcaggct
    10561 tattatttac catttattac gcactatttg ctttcgcgct tagtaaaaac caaaatatca
    10621 aattatccca aacttaaagc ttatatccaa tgaaaaagaa aatatttaaa tttagtattt
    10681 tatttaccat ttttataagt ctaagccaga gtactttggt ttttattttt aatcattatt
    10741 taattattga ttatagtgct tatgaaacac tgccacaaag ctttgcaatg ctaaatttag
    10801 ccgatcaaaa actttatcat ttaacgcaaa atttacgctt tttacattct attttagctt
    10861 ttttattaat aatatcattt ttctttgtgc atttattttt cttttatatt tccagaaaag
    10921 aaaaatttat accttattcc tttttttgtt ttgtgcttat ggtaataagt gctattgcta
    10981 atttacttga aggtatagag caaaaagaaa gtattttttg gtattacaag gcatttcttg
    11041 atgttggtgt ttgtttaatt tatcttttgt ttttagataa attttttcaa agtcaccttt
    11101 ttaaaatctt ttttgtatgt gcttgcttgt gtacaatttt aacaaaattt aaatttatgg
    11161 attttaccac gccttttgtt ttgcctattt atctttttat tttattgatt ttaatgcgta
    11221 aaaagagctt taatgtttga ttttttatat aatgatatta gctacttagg gctttttatc
    11281 gtatgttttc tttcaagcac gcttttgcct cttgcaagtg aagcctttgt tgtagctttt
    11341 ataaaacttg attttaatgc tcatttggtt ttatttatag ctactttagg caatacccta
    11401 ggaagcttaa gcacctatgc tctagcctat cttggcaaag aaaaaatttt agaaaaatat
    11461 ttttccaaat ctttaaaaaa gcttgataaa ttcaatgcaa attttactaa atttggaagt
    11521 ctttatgctt ttttaacctt tttaccctta ataggcgata tctttgcttt aggccttggt
    11581 tttgcaaaat accctttcat caaagcttgt tttttcataa gtcttggcaa attaagccgc
    11641 tatattttta taatttttat cgctaattct ttataaaaat catcaatctt taaagtgaat
    11701 tttgggataa taatttaaaa cccactaaga aagacaacca tgaaaacttt aactattatc
    11761 gatacttttg gcttcttttt tcgtctttat tatgcactca aaggatttaa aaattctcaa
    11821 ggacaagcta gtggaatgat tagcggtttt gctaatttta tctatagtct taaaaacgaa
    11881 tataaaagcg attatattat ttttgcacta gattctaagg gcaagacatt tcgtagcgat
    11941 attgatccaa attataaaaa aaatcgcacc ccgcccccac ccgaactttt ggaacaaatt
    12001 ccaatttgta tagaaatgat agaaaaaatg ggctttatga gtgcctctta cgagggttat
    12061 gaggcagatg atatcatcgc ttcagtggtt aaaacttgta aagataaaga tatttttgta
    12121 cgcattataa cacaggataa agatctttat cagcttataa aagatggtaa aacaagtatt
    12181 tatagcccta tttcaaaaaa tgactatgat gaagaagctt gctttgagaa atacggtgtc
    12241 aaaccttatc aaattaaaga ttttttagcc ttatgtggag atagctcgga taatatccca
    12301 ggagttaaag gcataggagc aaaaggtgct aaaacattgc ttgatgagtt tggaagtatc
    12361 gaaggcattt atgaaaattt gactctagta cgcaatgaaa gaagtcgtaa attgcttcta
    12421 gaaggtaaag aaaatgcttt tcttagtaaa aaacttgctt ctttgtatga ggatttagaa
    12481 gtaagcaact tgttagaaaa agctgatttt cctcaagatg agcctctttt aaaaattctt
    12541 gaaattttag agcattatga actcaatgtc ttacttaaaa aacttcgcca aaaccccgat
    12601 aataaagata aaaatttagg ctttaaagcc actcttatcc aagatgaaga caaactcttt
    12661 gaaattttaa attctcttga acaagaaagt atcatagctt ttgatactga aaccacaagc
    12721 attgatacca aagaagcaaa aattgtagga tttagttttt gtatgagtga aaatgaagcc
    12781 ttttatgtac ctcttactca taattattta ggtgtgggta agcaagtatc attacaaagc
    12841 gctaaaaaag ctatagagct tatttttaaa cattttatca tagggcataa tcttaaatat
    12901 gattttaaaa tcatagaaaa taattttaaa ctctctttgc cgcaaaaata tgctgatact
    12961 atgattttag catggcttaa aaacccttcc ttaagagtca atatggatga tttggctcta
    13021 agacttttta attatgaaac cttacatttt gaaagtcttg taaaaaaagg agaaaatttt
    13081 gcaagcgtag agcttgaaaa agcttgcaag tatgcagctg aagatgctta tatcacttta
    13141 agattttatc tttatttttt aaaaaatctt gaacctcatt tgcttgatct tgctaaaaat
    13201 tatgaatttg attttattaa aattattatg atgatggaag aaaatggcat aaaactcgat
    13261 acgcatgctc ttgaaattct catgaaaaaa tttgaatctg aaattaaaat tttaagcgaa
    13321 gaaatctatg ctttatgtga agatagattc aatcttaatt ccccaaaaca agtaggcgat
    13381 atactttttg aaaaactcaa gcttccaagt ggaaaaaaag gtaagacagg gtattctacc
    13441 gatgaaaaag tcttaaatga acttctcgat aaacatcctg ttatttctaa aattttagat
    13501 tatagagaac tggccaagct ttattcgact tattgcgagc ccttgttaaa acttgcttta
    13561 aaagatgaaa attcaagaat ttattcgagc tttttacaaa caggtactgc tacaggccgt
    13621 ctttcatcta aagatcccaa tttacaaaat atccccgcgc atggacaata tgcaaaagat
    13681 tataaatcct gctttatagc caaagaggga tttagtttta tcagccttga ttattctcaa
    13741 atcgaactta gaatgctagc gcactttagc gaagatgaaa aacttttaaa tgcttttaaa
    13801 aacgatgagg atatacatgc aagaaccgct ataatgatat ttggcgagag taattatgaa
    13861 acaagaagta tagcaaaaag tattaatttt ggcttgattt atggtatggg ttataaaacc
    13921 ttaagcaaaa atctaaaaat tgaagccaac ttagctaaaa cctatataga aaaatatttt
    13981 gaaaatttta ctagcattaa aagttatttc gaaaaagtaa aaaatgaagc caaggctaat
    14041 ggttttatta gcaccttaag cggacgtaaa cgctattttg actttgaaaa tgctaagccc
    14101 atgcaagtgg ctatgtatga aagagagagt ataaattcga ttttacaagg atcagctgca
    14161 gatattataa aatttgccat gctagaaatt gctaaaattt taaatcaaga taaaaggctt
    14221 atcttgcaaa ttcacgatga acttatcttt gaagttaaag atgaattatg tgaaaatttt
    14281 gtgaaaaaaa ctagtgatat tatggaaaat atagtaaaat taaaggtaaa attaaaaaca
    14341 agctcaagta tcgccaaaaa atggggcgat ttaaaataat caaggagtga tttaatggat
    14401 ctttcaacca tattaggaat ggttcttgca gtaactagta tctcagtagg agatatactc
    14461 gagggaggaa atcctctgca tgttatccac ctttcttctt ttctaatcgt tatgccaacg
    14521 gcagcttttt gtgccatgac ttcaactcat aaaaaaattg taaaagcagc ctataaagaa
    14581 cttaaaatcg tttttaaagg ttcaggtgta aatctacctg aaagaatagc tcagcttatc
    14641 gaattcgcaa ttattgcacg ccgagatggt cttttggctt tagaatcaag aacaaatgaa
    14701 attgaaaatg aatttttaag aaatgctatg atgatgctag tagatggaaa aagttttgaa
    14761 gaaattcatg aaagtatgga aattcaaacc gaacaacttg aagaacacta taaagaatgt
    14821 gcagaatact ggataatctt tggtgaaact tgtcctacta tgggacttgt tggagcggtt
    14881 tttgggttga ttttagcact gaaacttcta gataatcctc aagcaatggc agcaggtatt
    14941 tcaggtgctt ttacagctac agttacggga atttttggcg cttatgcact ttttgctcct
    15001 tggggaagaa agatgaaagc taatggtatg gatcttgtaa aagagcaaat tgtcattact
    15061 gaagctataa aaggaattgc agaaggtgct aatcctagag atttagaagc taaacttttt
    15121 aacttcttaa gtcatgacga tccaagaatt tcacaatttg acaaaggtta aaaatggcta
    15181 aaaaacacaa atgtccagaa tgtccagcag gtgaaaaatg ggctgtgcct tatgcagact
    15241 ttctaagttt gcttttggcg ctttttattg ctctttgggc aatttctaaa acaaatccag
    15301 ctaaagtaga agcactgaaa accgaatttg taaaaatctt tgattatact gcaacccaaa
    15361 ccgtgcaaca agaaacacaa gatacttata aatataaggg ttctcaagaa gaaaaagaag
    15421 atgaattgag caaacttaaa caaatggccg taaatcaaca agaagttatt aaaaaacttc
    15481 aagccgctct tgatcaatcc gaaaatcaag aaatacttaa cctaccttcc aaggttgaat
    15541 ttgaaagagg aagtgcacaa atagtatctg cagatattca agattatctt aaacgcattg
    15601 ctcagcttat ttcatactta cctcctcaaa tagaaattga aatcagaggt tatactgaca
    15661 atagtgactc agccttaaga agctatgatc taggctatac aagagcagaa aatgttttaa
    15721 aatatcttat agaaggcgga gttagcacca aaaatataaa ccttaaaagc tatggattaa
    15781 atagtcccat caatggaaat ccacaagctt tagaaaacaa tagagtgcaa atttatttta
    15841 aagtagatat taaggataat gacgcaaaac aatcagtgct tgatcttata gaaaaaagca
    15901 aataataaaa tttatttgct taattatttt tcttgacctg tcctgctaaa cgacttttat
    15961 tattagtatt gtaaacaaat ccaagtacct ctgctacagc tttaaacatt tctctaggaa
    16021 taagatcatt aatatcacaa gccttataaa gctctctcgc taaaggcgga ttttcataaa
    16081 caactacatt attatcataa gcaacctgtt ttatacgaag tgccaaaaaa tctactcctt
    16141 tagccacaac tctaggagct tgttcttttg ttgtatcata acgaatcgct acagcataat
    16201 gcgtcgggtt tgtaataacc acatccgccc ctgcaacatc ttgaaccata cggcggcgtg
    16261 ctgcttccat ttgtaagcga cgaatcctcc cttttacctg aggatctccc tccatttgct
    16321 tgtattcatc tttaatttct tgcttgctca ttcgcaagcc tttaaaatac tgaaaacgca
    16381 ccaaaaaaat atccaaaaca gcaatcacta aaaatgctat gattacaata gctgccaaaa
    16441 taatagccct atccctaagc caaatgagtt gtccaatgat attataacgc tcaaccaaag
    16501 gtaattcttg cataaatttt aaaagcacta taaaagctac agtaaatact acgcctacct
    16561 taagcacgat cttaacactc tcgacaagct tttttaaaga aaataaattt tttaagcctt
    16621 ttaatggatt gatttttcct aaattaggca ttataggttt ggtcgtaaaa ataaaaccaa
    16681 actgcataac attacctaaa atacctgcga tcataatact caaaactata ggtgctagca
    16741 aaatcaaaac ttcaaaaatg cttttaatca taatggcttg gataatacgc aaatcaaatt
    16801 caacacctat aaaactttga taatatctat atagattagt aattctttca ccgataaaac
    16861 ccatcataaa aagtgtaatc acaaaaccaa ctattaaagt aacaatagct gctgcgtctt
    16921 gggatttggg gacattgcct tcttttcttg cgtcttctat tttcttggac gtgggttctt
    16981 cagttttttc ttgatcttcg cctgccataa ttagcctaaa tttaagttta taaaattaga
    17041 taaaattata taaaaaaatg atgaatttta attaaagtta agagaagaaa ttttatcaag
    17101 aagaaaagcc cttttttaag ggcttgttat tatagtttat cttcgttttt atcaagatac
    17161 tcagcaacac ctttagggtt agctttcata ccagcatcac ctttgttcca gcctgcaggg
    17221 caaacttcac cgtgttcatt agtgaaaagc atagtatcta ccattctgat catttcatca
    17281 atatttcttc caagtggtaa gtcattaact acagcgtggc gaactgttcc atctgcatca
    17341 agcaagaaag aaccacgaag agcaactgct tctgcataaa gtacatcaaa atttctagca
    17401 atttgtttag ttaaatctgc aacaagtggg aatttaactt gaccaatacc cccttgattt
    17461 actggagtgt ttttccatgc aaaatgtgaa aattcattgt cgcctgaaat tccgattact
    17521 tcaataccac gatttttaaa ttcttgatat cttttatcaa aagcaattat ttctgaagga
    17581 caaacaaaag taaaatcttt tggatagaaa aatactaccg caccttttgg gcctatattt
    17641 ttataaagat taaaatcttc aacgatttcg ttatttccta atactgctgg agcagtaaag
    17701 tctaaagctt tttttgtaac tatcatgttt ttctcctaat taataaattt tattgatag
//
LOCUS       DBBXOW010000035        17156 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.036, whole genome shotgun sequence.
ACCESSION   DBBXOW010000035 DBBXOW010000000
VERSION     DBBXOW010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17156
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.036"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..330)
                     /locus_tag="ACJE1S_001100"
     CDS             complement(<1..330)
                     /locus_tag="ACJE1S_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HGG0806652.1"
                     /translation="MLKTKNIFITFFVLLILCFGVIFYTLTNSYLNFLLLKQYEQKIK
                     SLDDVLKFSLLEDLNSNNIKEFAQDTRADFIILKDDFEISSVLNADLFLNLEENKIYD
                     LNSKRVLV"
     gene            complement(324..986)
                     /locus_tag="ACJE1S_001101"
     CDS             complement(324..986)
                     /locus_tag="ACJE1S_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HGG0806653.1"
                     /translation="MSKSKILIIEDDIDLNDLLSLRLKACDYQIFSLLDFKGVEDLLD
                     SEQIDLLIVDRNLPSGDSLDRIKELRKQGYKEAVIFLTAKTLHQDLLEGFESGCDDYM
                     CKPFDFNELLLRIKAILKRHKREEEKLVFKDFSLDLINYEFFYKNEKLDVSNLEYELL
                     KCFFENPNTLLTRQFLSENVWKDDTTSDKTINIALTRLRNKFPKLKEHIISVRGIGYK
                     IC"
     gene            complement(973..2556)
                     /gene="serA"
                     /locus_tag="ACJE1S_001102"
     CDS             complement(973..2556)
                     /gene="serA"
                     /locus_tag="ACJE1S_001102"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HGG0806654.1"
                     /translation="MKKKIIVCDAILDKGVELLRKAEDIELIEAAKVPKNELMDMLAD
                     VEVAITRSSTDVDVNFLNHAKKLKALIRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLSSARSFVNAHNFLKNERKWEREKWYGVELMGKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKSLDEILTQSDFITIHTPKTKETDGMIGA
                     NEIAKMKDGIRLINCARGGLYTEEALCEGLKSGKIAWLGIDVFKKEPATNHPLLDFEN
                     VSVTSHLGANTLESQDNIAREACEQALNAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGVIGEYATSMLTFAAVGALSGILGEKINYVNAEF
                     VAKEKGVDLSCETLPNSGYNNKLSVKIITENSNINVSGTVFNENEQRIVGLNGFQTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLASKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLEELRQLEACIFVQYVEI"
     gene            complement(2553..3041)
                     /locus_tag="ACJE1S_001103"
     CDS             complement(2553..3041)
                     /locus_tag="ACJE1S_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806655.1"
                     /translation="MKKYATISILSILLLILLIVVFVLLWKFKANSNFIPEFAKDTNT
                     HQIEERQTQELTWREELAKWPSKDFTPAVEQFTLHFDADTSELKEKNKYYQLVVNKHD
                     IYSMFCLRQTLNSFNVKYFLLKSGESPEIFLDTGNKNLIDDIIKELKKYKINTEAKEI
                     WL"
     gene            complement(3044..4714)
                     /locus_tag="ACJE1S_001104"
     CDS             complement(3044..4714)
                     /locus_tag="ACJE1S_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HGG0806656.1"
                     /translation="MSEVNKKVQNNLEDYLEDEDFGQLLEAFDKSREETITEGVIVEI
                     KNDEVYVDIGRKSEGILALNEIQDENANLLFKVGDSIKVAVVGSRGGRSLLSHKKALR
                     KEKVIDFIQNYKEDDEYIFEVKVVGKNKGGLVVVNDDDVEFFLPKSQYGFKENNNLIG
                     KTFKVKIIKVDKEEQSIIVSRKKTLDDERKKRKELINNIAQQEGLIEGVVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPSILYKEGDKVPVKVVKYDKDRKHLSLSIKAALPD
                     PWGEIKDSLEVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIS
                     KGQEIDVEVIEINSDERRLRVSLRNLLSKPFDEFMKNHKIGDVIEGEVTSTTSFGAFV
                     KIGSVEGLLHNEDASWDRNEKCKDKFNNGDIIKVKIIKIDEEGQKISLSIKELSESPV
                     QEYAKNHKVGDIVKGKIRDIKDFGVFVELNKNVDALIHKEDISASTLENLKIGDEIEA
                     AIAFIDEKKNRIRLSVKNLVRIKEREVLNEINSDDKVTLGDIIKDQLA"
     gene            complement(4855..5685)
                     /locus_tag="ACJE1S_001105"
     CDS             complement(4855..5685)
                     /locus_tag="ACJE1S_001105"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HGG0806657.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEIARL
                     QKNFNVKTLENIRALSDEKKAIIRTHGITKQDLEELKKKDIEIFDATCPFVTKPQQIC
                     EQMSAEGYDVVIFGDENHPEVKGVRSYVATKAYVVLDKKDLENIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILRVKEVRVFNTICDATFKNQDAIKELSVKSDVMVVVGGKNSANTK
                     QLFLIAKANCEDSYLIETEEELQKEWFLNKTHCGISAGASTPDWIIKKVIAKIESFKC
                     "
     gene            complement(5675..6955)
                     /gene="aroA"
                     /locus_tag="ACJE1S_001106"
     CDS             complement(5675..6955)
                     /gene="aroA"
                     /locus_tag="ACJE1S_001106"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HGG0806658.1"
                     /translation="MKINALESFNTEISDIAADKSISHRFAIFSLLTQSENRAKNYLL
                     AEDTLNTLKIIENLGAKVKREGSSVSIMPPSEILSPNCVLECGNSGTAMRLMIGFLAG
                     VSGFFVLSGDKYLNNRPMKRICKPLSEIGAKIYGREQANLAPLCIEGQKLKAFDYKSE
                     ISSAQVKTAMILSAFRADKTSKFSEISLSRNHSENMLKAMNAPLKISDDYLSLEISPL
                     NQALKAQDILIPNDPSSAFYFALAAIILPNSKVVLKNILLNPTRIEAYKILQKMGAKL
                     EIKITQNDFETIGEIHASSSELKAVEVKENIAWLIDEAPALAIAFALAKGKSKLINAK
                     ELRVKESDRIAATVENLKLCGVNAKELEDGFEIEGSQIKKAKIKSYGDHRIAMSFAIL
                     GLLCGMEIDESECIKTSFPNFMDILTKIGARIDY"
     gene            complement(6952..9273)
                     /gene="pheT"
                     /locus_tag="ACJE1S_001107"
     CDS             complement(6952..9273)
                     /gene="pheT"
                     /locus_tag="ACJE1S_001107"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HGG0806659.1"
                     /translation="MIITKSWLNDWLDFEDKSLDDIAHTLNSIGIEVDKICTLKVPDK
                     IVVGFVKEKVKHENSDKLSICQVDVGNEILQIVCGAQNVAQGQFVAVALKGALMPNGM
                     EIKEAKLRGVDSCGMLCSSTELGFEKINDGIMLLDDSIGKLELGKALNSYEIFNDGLI
                     EVELTPNRGDCLSIYGIARDLAVALNLNLKEKPPFKEGENVLGIGRILRLSAEKELNS
                     LYNYRAIELKEKIQTNLLISLRLAQIENFGKNPIENLLNYATHSTGVLFNAYDLNSFY
                     KENEEFTFSLVKETRGETKISYQDELLSVSGIYQEEKFKCKEDSKIIIIEANYTDPMI
                     IADAKMAYKKQDEQTIYRSFRGSEPKLNLGMDFLLSVLEKNPNLIIYSSSQQIITNKE
                     LSNIAISIESINKTIGQEIDKDEVLKILKKLGFELIISADGLVNVKAPMHRPDIKNLA
                     DICEEVVRIIGIDNIASKGLEFVEKNRLNSTYKNYKELVELRKKAVANGYFESLHYVL
                     DNEEELKSLGFNPIKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     VVFGTNNEELNHIAFVHSGYQEEPKISNKAKPELVNFYDFLLDLKNIIGDFKLKASKH
                     DILSPYEQADIYLKDLKIGFAGRLHLKIENERDLLKTYICELDLNLIKHHFKLAKPYS
                     KFPSISRDLSILIPKGFEYEKIKNCIEELDLENLENFRLVDLYSDANLENSYSLTLKF
                     VFRDMNKTLEEAQVAEHMDKILQSFKEMGLELR"
     gene            complement(9270..10262)
                     /gene="pheS"
                     /locus_tag="ACJE1S_001108"
     CDS             complement(9270..10262)
                     /gene="pheS"
                     /locus_tag="ACJE1S_001108"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HGG0806660.1"
                     /translation="MQNFIEQIQECKNLNDLEALRVAVLGKKGILTESFAKLKDLAGE
                     EKKEFAAKLNSQKDAFNEAYLSKFKILENLALEEKMKQDALDFNYFDESPTNGALHPV
                     MSTMDRIIEYFVNLNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQRVSFANL
                     KSILEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGCGCRVCKQTGWLEVLG
                     CGVVDPNVFNFVGYKDVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            10383..10748
                     /locus_tag="ACJE1S_001109"
     CDS             10383..10748
                     /locus_tag="ACJE1S_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HGG0806661.1"
                     /translation="MKEKTVFELIVEGKIPCNKVLENNDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPKLMEKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFRLPKEKDENENPQALF"
     gene            complement(10787..11356)
                     /locus_tag="ACJE1S_001110"
     CDS             complement(10787..11356)
                     /locus_tag="ACJE1S_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1 family glyoxalase III"
                     /protein_id="HGG0806662.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAAELSGNLEVIIASLDN
                     ELLVKGANGISIKADCSLEAVDTKNLDAIALAGGFDGMNNLKNSNEILSIIKKLHSEG
                     KIVSAICASPIVLNAAGVLEGEFTCYPSCETGLQGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKQLCGDEIYNSLYEGLLIPLTK"
     gene            complement(11353..11490)
                     /locus_tag="ACJE1S_001111"
     CDS             complement(11353..11490)
                     /locus_tag="ACJE1S_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806663.1"
                     /translation="MIVLDFILIVAFVLFMIFLIVGFNYQMNEKAKIREEKFKNKERK
                     K"
     gene            11601..12344
                     /locus_tag="ACJE1S_001112"
     CDS             11601..12344
                     /locus_tag="ACJE1S_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG0806664.1"
                     /translation="MNQKNIRIFVFFAIILFWGYFSFPIEILQIKEADGAINYGYTPN
                     AQAYIKSYFITLLLTACSAIIGVVVGFSLAILRFSKIKVLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAIFALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPL
                     IFTGLVYYVSVKIFSYFAKKLELRMSKND"
     gene            12337..13065
                     /locus_tag="ACJE1S_001113"
     CDS             12337..13065
                     /locus_tag="ACJE1S_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG0806665.1"
                     /translation="MIEIKNLNKKYGNLEVIKNISTKISKGDIISIIGPSGGGKSTFL
                     RCINRLELADSGEILIKGRNILDEQTDINKIRQKVSMVFQHFNLFANKNVLQNLCLAP
                     VKTGILSEDEAINKAEILLKKVGLSDKKEVIPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDLAAEGLTMIVVTHEMGFARNVANRIFFMNKGELAVDA
                     SPKEVFENPKNERLKEFLNKVLNH"
     gene            complement(13092..14480)
                     /locus_tag="ACJE1S_001114"
     CDS             complement(13092..14480)
                     /locus_tag="ACJE1S_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013023629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG0806666.1"
                     /translation="MVVLLIICGIYYSFLTRFVQFRMLKSVFKILTERNENHTKEHIS
                     PFQALMISTASRVGIGNIAGISIAIAAGGAGALFWMWFMAFFGGASAFAESTLAQIYK
                     SKDNTGGFKGGPAYYIKKALGSHFFGAFFAFILIITYAYGFNGLQSQTMTSAFKVYYD
                     MFNPNATTDFASSSWPMIIGIILTLFGIWMFFSHHTKIGKVSSLIVPFMALAYILLAF
                     IAVLINFEKIPSVIVLIFESAFDFKAILGGFAGSALVIGIKRGLFSNEAGMGSAPNAA
                     AAALTSHPAKQGIIQAFSVLIDVIVCTSSGFLVLFSMAYFNVGADGKPLLTAMPLVQE
                     AMREYYGGFGVHFITIAIVLFAITSLIGNYYYAQANVKYLTNSKLVMNLFRITAVAMI
                     FIGSQMNLKLAWSLADLTMAFMAVTNIVSLLLLGGIVNKVLKDFNTQQDSKINPKFSA
                     SKLGIKNAECWD"
     gene            complement(14682..15149)
                     /locus_tag="ACJE1S_001115"
     CDS             complement(14682..15149)
                     /locus_tag="ACJE1S_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HGG0806667.1"
                     /translation="MFNIVLIHPRIPQNTGSIGRMCFNAGFKLHIVKPIVFDISQKAV
                     RRAGLDYWEKLEPVIWESLDIFLEHNLIYKDRFFFATTKSNKFYFQAKFQENDFLFFG
                     SESYGLPMELMQLNWDNAITIPMKACGRSLNLATSVGIVSYEALRQNFDRFSL"
     gene            complement(15152..16141)
                     /locus_tag="ACJE1S_001116"
     CDS             complement(15152..16141)
                     /locus_tag="ACJE1S_001116"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HGG0806668.1"
                     /translation="MSLIKINQKAYESNLKIIAEKIGSFSRLICVFKDNAYGHGAKIL
                     APIASTLGVNFIAVKNEKEAYELEDFFDNILILSHHPHGKENSKFIYALNDIDKINAY
                     QNDTRIHLKIDTGMHRNGVCVEDLNEALLKIKCSALKLEGIFTHFAGADEMDASFFIQ
                     REKFSKAKDIAKQIYKNLIFHSHNSPALFRAVKIPEDELCRTGLAQFGYGDESLKKVL
                     SLYAHRLSHRELQIGQSVGYGGAFSATEKIKIATYDLGYADGLFRYDGKGDLLLANKQ
                     KILGKISMDSFSCQDFGKEICVFDNADVWADFFNTINYEILVKLHPDIPRVLV"
     gene            complement(16141..17118)
                     /locus_tag="ACJE1S_001117"
     CDS             complement(16141..17118)
                     /locus_tag="ACJE1S_001117"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase family protein"
                     /protein_id="HGG0806669.1"
                     /translation="MLKKILAFYFICISALGASDLVKIYLNQGLDAVGVAIEKELTNK
                     DFWLDEIGDRNISLGYYNDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAIITGLMG
                     DKQVEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGTRLDEFKTRGCIALFNENLEEFAKVVQDKKVFAMTEEKEKVRAKKEDIAALLADL
                     FAWKLAWTDSDINTYLNFYDEKQFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNVENETMYRISFYEDYYTKNYQFKGDKILYVKIDSKGKMKILAEQ"
BASE COUNT         5737 a         3067 c         2224 g         6128 t
ORIGIN      
        1 tacaagaact ctttttgaat ttaaatcata aattttgttt tcttctaaat ttaaaaataa
       61 atccgcattt aaaaccgaag aaatctcaaa atcatctttc aaaataataa aatccgccct
      121 tgtatcttgt gcaaattctt tgatattgtt agaatttaaa tcttctaaaa gagaaaattt
      181 taaaacatca tcaaggcttt tgattttttg ttcgtattgt tttaagagta aaaaattcaa
      241 ataagaattt gtaagcgtat aaaatatcac accaaaacac aaaatcaaca aaacaaaaaa
      301 agttataaaa atatttttag ttttcaacat atcttataac caatgcccct aacgcttata
      361 atatgctctt taagctttgg aaatttgttt cttagtcttg ttaatgctat attgatcgtc
      421 ttgtcacttg tggtatcatc tttccataca ttttcactta aaaattgtcg tgtcaataaa
      481 gtattgggat tttcaaaaaa acattttaaa agctcatatt ccaaatttga aacatctaat
      541 ttctcattct tgtagaaaaa ttcataattg atcaaatcca aagaaaaatc tttaaaaact
      601 agcttttctt cttctctttt gtggcgtttt aaaatagctt taatacgaag taacaattca
      661 ttaaaatcaa aaggtttgca catataatca tcgcagccac tctcaaaacc ttcaagtaaa
      721 tcttgatgca aggttttagc ggttagaaaa atcaccgctt ctttataacc ttgctttctt
      781 agctctttaa tcctatctaa agaatccccg cttggaagat ttctatcaac tatcaaaaga
      841 tcgatttgct cactatctag caaatcttca actcctttaa aatctaacaa ggaaaaaatt
      901 tgataatcgc aagccttaag tcttaaacta agcaaatcat ttaaatctat atcatcttct
      961 atgataagaa ttttagattt cgacatattg tacaaatata cacgcctcta gttgtcttaa
     1021 ttcttctaaa acttcttttt gcactttttc gtcgatcaat accactgcta aagcatatcc
     1081 aaaaccatct ctacccaatc taaaatcagc gatattgata tttttagatg ctaagacaga
     1141 gctgatttta gcaataaccc ctgggatatc tttatttttg aaaataatca tttttccttt
     1201 tggcttgaaa tcagtttgaa agccatttaa tccaactatg cgttgttcat tttcattaaa
     1261 tacagttcct gaaacattaa tatttgaatt ctctgtgatg attttaacac taagtttgtt
     1321 gttataaccg ctatttggaa gggtttcgca agataaatct acaccttttt ctttggcaac
     1381 aaattcagca ttaacataat ttattttttc acctaaaatt ccacttaaag ctcctacagc
     1441 agcaaatgta agcattgaag tagcatattc gcctatcacc ccttctgctt ctaatttaat
     1501 actttttata ggatttttat caatttgaac tgctaaaaat gccatcttag aaacaagctc
     1561 gatgtaaggt gctacaaaag gtggtaaatc ctcagtttta ataggtaaat taagagcatt
     1621 aggatatgcc acacctctag ccgcatttag ggcttgttca caagcttctc ttgcaatatt
     1681 gtcttgactt tctagagtat tagctccaag atgagaggtt actgaaacat tttcaaaatc
     1741 taaaagagga tggttggtag caggttcttt tttgaaaaca tcgataccaa gccaagctat
     1801 tttaccactt tttaagcctt cgcatagagc ttcttctgta tataagcccc cgcgagcaca
     1861 attaataagt cttataccat ctttcatttt tgcgatttca ttagcaccaa tcataccatc
     1921 agtttcttta gtttttggcg tatggatggt gataaaatcg ctttgagtaa gaatttcatc
     1981 caaacttttt gcttgctcca tatctaagtc tgtgatttta gaagctgaaa tatatggatc
     2041 gtaggctaga attttcatac caaaagcttt ggcacggatg gctacacgcg aacctatatt
     2101 tccaaaaccg ataacaccca aggttttacc catgagctct acgccatacc acttttctct
     2161 ttcccatttt ctttcattct ttaaaaaatt atgtgcatta acaaaacttc tagcagaact
     2221 tagaagatga gccatagtaa gctctactgc agcaatggta ttagcagttg ggacattcat
     2281 tactataaca ccgcgtttgg aacattcagg gatatcaaca ttatccaccc ctactcctgc
     2341 gcgtataaga gctttgagtt ttttagcatg atttaaaaaa ttgacatcta catcagtaga
     2401 acttctagta atagcgactt ctacatctgc aagcatatcc attaactcat tctttggaac
     2461 tttagcagct tctataagct caatatcctc agcttttctt aaaagctcta cacccttatc
     2521 taaaattgca tcacaaacaa taatcttttt tttcataacc aaatctcctt cgcttctgtg
     2581 ttaattttat attttttaag ttctttgata atatcatcaa ttaaattttt attgcccgta
     2641 tctaaaaaga tttcaggact ttcgccggat tttaataaaa aatacttcac gttaaaagaa
     2701 tttaaagtct gtcttaaaca aaacatggag taaatatcat gcttattaac aacaagttga
     2761 tagtatttgt ttttttcttt aagctcacta gtatctgcat caaaatgtag agtaaattgc
     2821 tctacggctg gagtaaaatc tttactaggc catttggcta attcttctcg ccaagtgagt
     2881 tcttgggttt gcctttcttc aatctgatgc gtatttgtat ctttagcaaa ttcgggaata
     2941 aagttagaat ttgctttaaa tttccaaagc agtacaaaaa cgacaataag caagatgagt
     3001 aataaaatac tcaaaatgct tatagttgca tattttttca tcattaagct aactgatctt
     3061 taatgatatc acctaaagtt actttatcgt cgctattgat ttcatttaat acttctcgct
     3121 ctttaattct aaccaaattc ttaacactta ggcgaattct gtttttcttt tcatcgataa
     3181 atgcaattgc agcttcaatt tcatcaccaa tttttaaatt ctcaagagtt gaagcactaa
     3241 tatcttcttt atgaataagc gcatctacat ttttattgag ttctacaaat actccaaaat
     3301 ctttgatatc tctaattttt cctttaacga tatcgcctac tttatgattt ttagcatatt
     3361 cttgaacagg tgattcgcta agttctttaa tgcttaaaga aattttttga ccctcttcgt
     3421 cgattttgat aatcttaact ttgataatat caccattgtt aaatttatct ttacattttt
     3481 catttctgtc ccaagatgca tcttcattat gcaaaagacc ctctacagaa ccaattttta
     3541 caaaagcacc aaaagaagtc gttgaagtaa cttctccttc tatcacatca ccaattttgt
     3601 gatttttcat aaattcgtca aaaggtttag aaagtaaatt tcttaaagat actcttaagc
     3661 gtctttcatc tgaattgatt tcaataactt caacatcgat ttcttgaccc ttgctaatat
     3721 aatcttttgg attttttata tttttatccc aagaaatttc gctaatatgc aaaaatcctt
     3781 ctatatcgtt acccaaatca acaaaagcac catatggctc tatatttgaa acaataacct
     3841 taatggtatc acccacttct aagctgtctt taatttctcc ccaaggatca ggtaaagccg
     3901 ctttgataga aagggataaa tgtttgcgat ctttgtcata ttttactact ttgacaggaa
     3961 ctttatctcc ttctttgtat aaaatactag gatttacagg tcctttatat gaaatttcac
     4021 tatagtgaac aagtccatca acaccaccca catcaacaaa cataccataa gttgtaattt
     4081 tttttacaac accttcgata agcccttctt gctgagcgat attattaata agttctttgc
     4141 gtttttttct ttcatcatct aaagttttct ttctagatac aataatgctt tgctcttctt
     4201 tatcaacttt gatgatttta accttaaaag ttttacctat aagattgtta ttttctttga
     4261 agccgtattg tgattttggt aagaaaaatt ctacatcatc atcatttaca acaacaagtc
     4321 cgcctttatt ctttcctact acttttactt caaaaatata ctcatcatct tctttataat
     4381 tttgaataaa atcgataact ttttcttttc ttaaagcttt tttgtgagaa agtaaagatc
     4441 taccaccacg agagcctaca acagcaactt taatgctatc acctacttta aataacaaat
     4501 tagcattttc atcttgaatt tcatttaatg ctaaaatacc ttctgatttt ctgcctatat
     4561 ctacatagac ttcatcattt ttaatctcta cgattacacc ttcagttata gtttcttctc
     4621 ttgacttgtc aaaagcttct aaaagctgcc caaagtcttc atcttcaaga tagtcctcta
     4681 aattgttttg aacttttttg ttcacctcgc tcatcatggt ccttttgaaa aaaaattaaa
     4741 atttgactga ttttacctta tttttcttta attagtgtta agaattttaa tttttattaa
     4801 ttttttttaa attgtagttt tatttacttt ttgaaaaaat aaaatatcac aattttagca
     4861 cttaaacgat tctattttgg ctataacttt tttaataatc caatcaggcg tactagctcc
     4921 agcgctaatt ccgcaatgtg ttttatttaa aaaccattct ttttgcaatt cttcttcggt
     4981 ttcgatcaaa tagctatctt cgcagtttgc cttagctatt aaaaaaagtt gtttggtatt
     5041 ggctgaattt ttacctccga caactaccat cacatcactt ttgacagaaa gttctttaat
     5101 agcatcttga tttttaaaag ttgcgtcaca aattgtatta aaaactctta cttctttaac
     5161 cctaagaatt aaaaaattaa ctatttccat aaaatgttca ggttttttag tcgtttgact
     5221 tacaactgct attttattag gcaatttaat attttcaaga tcttttttat ctaaaactac
     5281 ataagctttt gtggctacat agcttcttac acccttaact tcaggatgat tttcatcgcc
     5341 aaaaattacc acatcgtagc cttctgcact catttgttca caaatttgct gtggtttggt
     5401 tacaaaagga caagttgcat caaaaatttc aatatctttc tttttaagct cttctaaatc
     5461 ttgcttagta attccatgtg ttcttataat ggcttttttt tcatcactta aagctcttat
     5521 gttctctaag gttttaacat tgaaattctt ttgcaagcga gcaatttctt cattattatg
     5581 gataagcggc cctatggttg ccgcatcttt aatttgttca gcttttttaa ttgctctttt
     5641 tacaccaaaa caaaagccat aatttttagc taattcaata atcaatccta gctcctattt
     5701 ttgtaagaat atccataaag ttaggaaaag aagttttaat acactcactt tcatcaatct
     5761 ccattccgca aagtaagcct aaaatcgcaa aactcatggc aatacggtga tccccatagc
     5821 tttttatttt agcttttttg atttgagagc cttcgatttc aaaaccatct tcaagttctt
     5881 tagcatttac tccacaaagt tttaaatttt caaccgtagc agcaattcta tcgctttctt
     5941 ttacccgaag ttctttagca ttgatgagtt tagatttacc ctttgctaaa gcaaatgcta
     6001 tagctaaagc gggtgcttca tctataagcc aagctatatt ttctttaact tctactgctt
     6061 ttaactcgct tgagcttgca tgaatttcgc ctatggtttc aaaatcattt tgtgtaattt
     6121 ttatttcaag ttttgcaccc attttttgca aaattttgta agcctcaata cgtgtaggat
     6181 tgagtaaaat attttttaaa actactttag aattaggtaa aataatcgca gctaaagcaa
     6241 aataaaaagc cgaagaagga tcgttaggta taagaatatc ttgagctttt aaagcttgat
     6301 ttaaaggaga aatttcaagg cttaaataat catcactgat ttttaaaggt gcattcatag
     6361 cttttagcat gttttcacta tgatttctac ttaaagatat ctcgctaaat ttggaagttt
     6421 tatccgctct aaaagcagat aaaatcatag ctgttttaac ttgagctgaa gaaatttcac
     6481 ttttataatc aaaagctttt agtttttgtc cttctataca aagtggagct aaatttgctt
     6541 gttctctgcc gtaaattttt gcaccaattt cacttaaagg tttacaaatt cttttcatgg
     6601 ggcgattgtt aagatattta tcgccactta aaacaaaaaa gcctgaaaca cccgctaaaa
     6661 atcctatcat caaacgcatt gcagtgcctg aatttccgca ttctaaaaca caattaggag
     6721 aaagtatctc actaggcggc ataatactta cactagaacc ttctcgcttt actttagctc
     6781 ctaaattttc tattattttc agagtattta aagtatcttc agctaaaaga taatttttag
     6841 ccctattttc actttgggtt aaaagtgaaa aaatagcaaa acgatgagat atgcttttat
     6901 ctgctgctat atcagaaatt tcagtattaa aagattctaa ggcatttatt ttcatcttaa
     6961 ttcaagcccc atttctttaa agctttgtaa aattttatcc atatgttctg caacttgagc
     7021 ctcttctaag gttttattca tatctctaaa aacaaattta agagttaaac tataagaatt
     7081 ttcaaggttt gcgtcgctat acaaatcaac caagcggaaa ttttctaaat tttctaaatc
     7141 taattcttct atgcaatttt taattttttc atattcaaaa cccttaggta taagtatgct
     7201 aagatctctg ctaatgcttg ggaatttaga ataaggttta gccaatttaa aatgatgttt
     7261 aatcaaattt aaatcaagtt cgcaaatata tgtttttagc aaatctcttt cgttttctat
     7321 ttttaaatgc aagcgacctg caaaacctat ttttaaatct tttaagtaaa tatcagcttg
     7381 ctcgtaagga cttaaaatat catgctttga agcttttaat ttaaaatctc ctatgatatt
     7441 tttaagatct aaaagaaaat cataaaaatt taccaattca ggctttgctt tattcgaaat
     7501 tttaggctct tcctgatagc ctgaatgtac aaaagctata tgattgagtt cttcattatt
     7561 agttccaaaa actactccaa gttcaaaaag cttaataatc tttttagaat ttttcgcatt
     7621 taaacttgct gcgtttaaaa gatggtttaa aagcgttgtt cttagagtgt ttaactctgc
     7681 agtaattgga ttgataagtt ttaattttat aggattaaaa ccaagagatt ttagctcctc
     7741 ttcattatct aaaacataat gcaaactttc aaaatatccg ttagctaccg ctttttttct
     7801 aagttctact agctctttat aatttttata agtggaattt aaacgatttt tttctacaaa
     7861 ttccaaacct tttgaagcga tattatcaat acctataata cgcactactt cttcacaaat
     7921 atcagctaga ttttttatat cagggcgatg cataggggct ttaacattaa caagtccatc
     7981 agcggaaatt ataagttcaa aacctagttt tttaagaatt tttaaaactt catccttatc
     8041 gatttcttga cctatagtct tattaatgct ttcaatactg attgctatgt tagacaattc
     8101 cttatttgtt ataatttgtt gtgaggagct ataaataatc aaatttggat ttttttctaa
     8161 aacgctcaat aaaaaatcca tacctaaatt caatttaggc tcacttcctc taaaacttct
     8221 ataaatagtt tgctcatctt gctttttata agccattttt gcatctgcaa taatcattgg
     8281 atcagtataa tttgcctcga tgatgattat cttagaatct tctttgcatt taaatttttc
     8341 ttcttggtaa attccgctta cactaagaag ttcatcttgg taagaaattt tagtctcacc
     8401 ccgtgtttct ttgactaagc taaaagtaaa ttcttcattt tccttataaa aagaattgag
     8461 atcataagca ttaaagagta cacccgtaga gtgtgttgcg taatttaata aattttctat
     8521 agggtttttt ccaaaatttt ctatttgtgc caatcttaaa ctaatgagta gattggtttg
     8581 aattttttct tttaattcta tagctctgta attataaaga ctgtttaatt ctttttcagc
     8641 actcaagcgt aaaatacgac ctatgcctaa aacattttcc ccttctttaa aaggtggttt
     8701 ttcttttaag tttaaattca aagccactgc taaatcgcgt gctataccat aaatactaag
     8761 acaatctccc ctatttggag ttaattcaac ttcgatcaaa ccatcattaa aaatttcata
     8821 ggaatttaaa gcttttccaa gctctaattt gcctatacta tcgtctaaaa gcataatgcc
     8881 atcattgatt ttttcaaagc ctaattctgt gctagaacaa agcataccgc aagaatctac
     8941 tcctcgtaat ttagcctctt tgatctccat accatttggc attaaagcac cttttaaggc
     9001 cactgcgaca aattgccctt gtgcgacatt ttgggctccg caaactattt gcaagatttc
     9061 atttccaaca tcaacttgac aaatgcttaa tttgtcagaa ttttcatgct ttactttttc
     9121 tttgacaaaa cccactacga ttttatccgg cacttttaag gtgcaaattt tatctacttc
     9181 tatacctata gaatttaatg tatgcgctat atcatctaaa cttttatctt caaaatctaa
     9241 ccaatcattt aaccaacttt tagtaattat catctaaatt gctccaatag tcttaaatca
     9301 ccttcaaata aagatcttag atcaggaatt tgatgtaaaa gcattgcaaa gcgttctaca
     9361 ccaagaccaa aagcatagcc acttacatct ttataaccta caaaattaaa tacattagga
     9421 tctacaaccc cgcatcctaa aacctcaagc caacccgttt gcttacaaac cctacatcca
     9481 caacccttgc aaaatacaca cgaaatatca acttctgctg atggttctgt aaatgggaaa
     9541 aaactaggac gaaaacgcac ttttacatct ccaaacatat aacgcaaaaa gtcctctaaa
     9601 atacttttta aatttgcaaa acttactctt tgcccttctt ctactacaag cccttctact
     9661 tgatgaaaca taggagtatg ggtgatatca aaatctcttc taaaaactgc tcctggagct
     9721 atcattctaa tgggtggttt ttgtgcaagc atggttcgaa tctgcacagg agaagtttga
     9781 gttcttaaaa gtcttttatc gtcaaaataa aaagtatctt gcatatctct tgccggatga
     9841 gattttggta aatttaaagc ttcaaaatta tgaaaatcat cttctattaa agggcctttt
     9901 tctatgctaa aatttaaatt tacaaaatac tctataattc tatccatagt actcataaca
     9961 ggatgtaaag caccatttgt aggactttca tcaaaatagt taaaatcaag agcatcttgc
    10021 ttcatttttt cttctaaagc aagattttcc aaaattttaa attttgataa ataagcctca
    10081 ttaaaagcat ctttttgaga atttaattta gctgcaaatt ctttcttttc ttcgcccgct
    10141 aaatctttta gttttgcaaa actctctgtt aagatacctt tttttccaag gacagcaact
    10201 cgaagagcct ctaagtcatt taaattttta cattcttgaa tttgttcgat aaaattttgc
    10261 aattttctac cttaataagt tatttttagt tttaatttta ttaaaaacta ttttaaattc
    10321 agcataaaaa ctaaagttta aagatataat tgtataaaat taacactaaa gaaggataaa
    10381 taatgaaaga aaaaactgtt tttgaactca ttgttgaagg aaaaattcct tgcaataaag
    10441 tacttgaaaa taatgatttt ttagcttttc atgatatagc tcctaaggcg cccattcata
    10501 tacttattat cccgaaaaaa cattttaaag attttcaaga atttgatcct aagcttatgg
    10561 aaaaaatgac aagttttata caagaattgg ctgtactttt aggagtggat aaaagtggat
    10621 atcgcttggt aacaaattgt ggcaaaaaca gcggtcaaga agtttttcat ctacattttc
    10681 atatgttggg tggctttaga cttcctaaag aaaaagatga gaatgaaaat cctcaagctt
    10741 tattttaatt tatgatagtg ttttttacac tatcataaca aaatgcttat tttgttaaag
    10801 gaataagcaa accttcatat aatgaattat aaatttcatc accgcatagt tgctttgcaa
    10861 gctctaatcc aaataaaata gccgttgcag gacctgcact tgtaataaca tttttattta
    10921 caactacagc tttattcact ctatttcctt gaagacctgt ttcgcaactt ggatagcaag
    10981 taaattcacc ctctaaaact ccagcagcat ttaatactat aggagaagca caaattgcag
    11041 aaacaatctt gccttcactg tgtagttttt taataatact taaaatttca tttgaatttt
    11101 taagattatt cataccatca aaaccacccg ccaaggctat tgcatcgaga tttttagtgt
    11161 ctacagcttc taaagaacaa tccgctttta tgctgatccc atttgcacct tttaccaaaa
    11221 gttcattatc caaagaagcg ataataactt ccaaattccc acttaattcc gcagctcttt
    11281 ttaatacatc tgctatacct ataaactcag cttcttcaaa tccttgagcc aaaggaatca
    11341 atactttttt actcattttt ttctctcctt atttttaaat ttttcttccc gaattttagc
    11401 tttttcattc atttgatagt taaatcccac tatcaaaaat atcataaaaa gcacaaaagc
    11461 tacgattaaa ataaaatcta aaactatcat atcgcaaaac cttttttaaa attctatcat
    11521 attattacaa atctttaaag aaaaatcaaa cgataatttt atagaattta agttaaaaat
    11581 ttttgaataa aggttaagat ttgaatcaaa aaaatataag aatatttgta tttttcgcca
    11641 tcattctttt ttggggatat ttttcttttc ctattgaaat tttacaaatt aaagaagcgg
    11701 atggggctat aaattacgga tacactccaa atgcgcaagc ttacataaaa agttatttta
    11761 tcactctttt acttactgct tgctcggcaa ttattggtgt agttgttggt tttagtcttg
    11821 ctatcttgcg cttttctaaa attaaagtct taaattttat catagatgaa tatattgata
    11881 ttataagagg aacccctgta atattacaac ttatgatttt tgcttttgta atttttactt
    11941 ttattgataa tctttatgca gcaatatttg ccctagggct taatagctct gcttatatag
    12001 cagaaatcgt aagaagcggg attaatagtg tcgataaagg acaaatggaa gcagcgcgtg
    12061 ctatggggct tgattataaa acttcaatga aagaaattat attaccacaa gcgaccaaaa
    12121 acattttacc cgctttggct aatgaattta tttctttgtt taaagaaact tccgtggttg
    12181 gatttataag cgttattgat attactatgc aaagccaaag ccttcaagcg gtattataca
    12241 atccaaaacc tcttattttt acaggacttg tgtattatgt aagtgtaaaa atttttagtt
    12301 attttgctaa aaaacttgag ttaaggatga gcaaaaatga ttgagattaa aaatttaaat
    12361 aaaaaatatg gaaatttaga agttattaaa aatatcagca ccaaaatttc caaaggcgat
    12421 attatatcca tcataggtcc aagtgggggt ggaaaaagta cttttttgcg ttgtattaac
    12481 cgcttggaac ttgcagacag tggagaaatt cttatcaaag gacgcaatat cttagatgaa
    12541 caaactgata ttaataaaat tcgtcaaaaa gtcagcatgg tatttcaaca ttttaatctt
    12601 tttgccaata aaaatgtatt gcaaaactta tgcttagccc cagtaaaaac aggaatctta
    12661 agcgaagatg aagctataaa taaagctgaa attttactta aaaaagtagg attatccgat
    12721 aaaaaagagg taataccgca caaactttca ggcggacaaa agcaacgcat tgccatagca
    12781 agaagtttga tgatgaatcc tgatgtaatt ttatttgatg agcctacttc agcacttgat
    12841 cctgaaatga taggagaagt tttaagtatc atgaaggatt tggccgctga agggcttact
    12901 atgatagtag ttactcatga aatgggtttt gccagaaatg tcgctaatcg catttttttc
    12961 atgaataaag gagaacttgc agtggatgca agccctaaag aagtatttga aaatccaaaa
    13021 aatgaaagat tgaaagaatt tttaaataag gttttaaatc actaaaaagc cttaaaatta
    13081 aggcttttta atcagtccca gcattcagca tttttaatac ctagttttga agcgctgaat
    13141 tttggattta ttttagagtc ttgttgggtg ttgaaatctt tcaatacttt attgactata
    13201 ccccctaaaa gaagtaaaga aacaatattt gtaactgcca taaacgccat agttaaatcc
    13261 gctaaactcc aagcaagttt taaattcatt tgagaaccta taaaaatcat tgctacagca
    13321 gtaattctaa acaaattcat gactaatttg gaatttgtaa gatattttac attagcttgg
    13381 gcataatagt aattccctat caaagaagtg atagcaaata aaacaatagc tatagtaata
    13441 aaatggactc caaaaccgcc ataatattca cgcattgctt cttgtactaa aggcattgcg
    13501 gttaaaagag gttttccatc ggctccaaca ttaaaatatg ccatagaaaa aagaaccaaa
    13561 aatcctgaac ttgtacaaac aataacatca atcaaaaccg aaaacgcttg tataatacct
    13621 tgttttgcag ggtgacttgt aagagcagca gcggcagcat ttggagcaga acccatgccc
    13681 gcctcatttg aaaagagtcc tcttttaatt cctataacca aagcagaacc agcaaatcca
    13741 cccaaaatcg ctttaaaatc aaaagcactt tcaaatataa gcactattac agaaggaatt
    13801 ttttcaaaat taatcaaaac agctataaag gcaagtaaga tataagctaa tgccataaaa
    13861 gggacgatta aagagcttac tttacctatt tttgtatgat gtgaaaaaaa catccaaatt
    13921 ccaaaaaggg ttaaaataat accaataatc ataggccaag aacttgaagc aaaatctgtt
    13981 gtagcattag gattaaacat atcataataa actttaaaag ccgaagtcat agtttgactt
    14041 tgaagtccgt taaatccata agcataagta ataataagaa taaaagcaaa aaaagctcca
    14101 aaaaaatgag aacctaaagc tttttttata taataagcag gaccaccttt aaatcctcct
    14161 gtattatctt tagacttgta aatttgtgct aaagtgcttt ctgcaaaagc tgaagcacca
    14221 ccaaaaaacg ccataaacca catccaaaat aaagcacccg ctcctcctgc agcgatcgcg
    14281 atagagatgc ctgcaatatt tcctatacct accctagaag ctgttgatat catcaaagct
    14341 tgaaaaggag atatgtgctc tttggtatgg ttttcatttc tttcagttag aattttaaaa
    14401 acggatttta acatgcgaaa ttgtacaaat ctagttaaga aactatagta aattccgcag
    14461 attataagta aaactaccat tatagtatca gtatatggca gaacatattc gagaattttt
    14521 aatatctttt catcgaatgg aactgagggg tttaaagtta aattttgctc acccatattt
    14581 ctcctttaaa aaagtaaaat tcgctacaac tttagcatat tttttatgaa aaaatattga
    14641 taatttacaa aatatttaaa aaaatataaa gttaagtaag attataaact aaaacgatca
    14701 aaattttgac gcaaggcttc ataagaaaca atgccgacac ttgtggccaa atttaaactt
    14761 ctaccacaag ctttcatagg gattgtaatg gcattatccc agttaagctg cattaattcc
    14821 atcggtaaac catagctctc gctaccaaaa aataaaaaat cattttcttg aaatttggct
    14881 tgaaaataaa atttattact ttttgttgtc gcaaagaaaa aacgatcttt gtaaatgaga
    14941 ttgtgttcaa gaaagatatc taaactttcc caaattacag gctcaagctt ttcccaataa
    15001 tcaagccctg ctctacgcac tgctttttga gaaatatcaa aaactatggg tttgacaata
    15061 tgcaatttaa aacccgcatt aaaacacatt ctacctatac tgccagtatt ttgaggaatt
    15121 ctaggatgaa ttaaaacaat attaaacata tttacaccaa tactcttggg atatcaggat
    15181 ggagttttac taaaatttca taattgatag tattgaaaaa atctgcccaa acatctgcat
    15241 tatcaaacac acatatttcc tttccaaaat cttgacaaga aaaactatcc attgaaattt
    15301 tacctaaaat tttttgttta ttggctagca ataaatctcc cttgccatca taacgaaaca
    15361 aaccatctgc ataacccaaa tcataggtag ctattttgat tttttctgtc gcactaaaag
    15421 ctccaccata acctacactt tgacctattt gtaattctct atgacttaat ctatgagcat
    15481 ataaacttaa aacttttttt agactttcat caccataacc aaattgcgct aagcctgttc
    15541 tacaaagctc atcttcgggt atttttacag ctctaaataa agccggggaa ttatgcgagt
    15601 gaaatatcaa atttttataa atttgtttag caatatcttt agctttagaa aatttttccc
    15661 tttgaataaa aaaacttgca tccatttcat ctgcacctgc aaaatgtgta aatataccct
    15721 ctagcttcaa tgcagaacat ttgattttca acaaagcttc atttaaatcc tcaacgcaaa
    15781 ctccattgcg atgcattcct gtgtctattt taagatgtat tcttgtatcg ttttgataag
    15841 cattgatttt atctatatca tttagagcat aaataaattt agaattttct ttgccatgtg
    15901 gatggtgaga aagaattaaa atattatcaa aaaaatcttc gagctcataa gcttcttttt
    15961 catttttaac tgctataaaa ttaacgccca aagtactagc aatcggagct aaaatttttg
    16021 ctccatgccc ataagcatta tctttaaaaa cgcaaatcaa tcttgaaaag ctacctattt
    16081 tttcagctat aatttttaaa ttgctttcat aagctttttg attgatttta attaaagaca
    16141 ttattgttct gctaagattt tcatttttcc cttgctatca attttaacat ataagatttt
    16201 atccccttta aattgatagt ttttagtata ataatcctca taaaatgaaa ttctatacat
    16261 agtctcattt tctacattcg gataagggct gatatttata tccgaaaatt taatcttttt
    16321 gtcttctttt ctagaaaaaa tagacttttt catagaagca aattgttcaa atttcatttt
    16381 atcaaaacgc ttaaattgtt tctcatcgta gaaatttaaa taagtattta tatcgctatc
    16441 tgtccaagct agcttccaag caaaaagatc tgcaagtaaa gcagctatat cttctttttt
    16501 ggctcttact ttttcttttt cctctgtcat agcaaatact tttttatctt gtactacttt
    16561 tgcaaattct tcaagatttt cattaaataa ggctatgcaa ccacgcgttt taaattcatc
    16621 caatcttgtt ccatctaaag gatagccatg tatccaaatc cctccgcctg ttttgccttg
    16681 aactttatca agtaaattag gataagttgt tgcaaacgca aaaggaccat aataaggatc
    16741 ccctggatta aatttgcgtc caagttcata aaagcctact ggagttttta aatccccctc
    16801 aacttgttta tcccccataa gtcctgtaat gatagctttt tgttcaaagt cttgtttaat
    16861 cttcccatca ctataagaat aaacacggag aattttatct gtcttatttg taagcacaat
    16921 agcaacatca tcattgtaat atcctaaaga gatatttcta tcgcctattt catctaacca
    16981 aaaatcttta tttgttaatt ctttttcaat tgctacacct acagcatcta aaccctgatt
    17041 taaataaatt tttaccaaat cagaagcccc aagagctgaa atgcatataa agtaaaatgc
    17101 taaaatcttt ttaagcaatg cttttcctta aaactgtatt tataatattt tttgac
//
LOCUS       DBBXOW010000036        16934 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.037, whole genome shotgun sequence.
ACCESSION   DBBXOW010000036 DBBXOW010000000
VERSION     DBBXOW010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16934
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.037"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(120..224)
                     /locus_tag="ACJE1S_001118"
     CDS             complement(120..224)
                     /locus_tag="ACJE1S_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806670.1"
                     /translation="MTALDIFQIIFIFVVVLIGFVGMIWVISKDKSNR"
     gene            complement(221..1291)
                     /gene="rlmN"
                     /locus_tag="ACJE1S_001119"
     CDS             complement(221..1291)
                     /gene="rlmN"
                     /locus_tag="ACJE1S_001119"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HGG0806671.1"
                     /translation="MKELINILDFLPEELEEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQTYHFSPLKCVKNEQSKDGSIKYLFELIDGLRIESVLLPMKEEQFDE
                     EGKRISHTRYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILSQNDGLAISPRRQTISTSGLAKQIKELGEM
                     NLGVLLAISLHAVNDELRTELMPINKAYNIAAIMDAVRAFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSIYHRPKLENAIKFQDLLSAKGVTCTI
                     RESKGLDISAACGQLKERAKEL"
     gene            complement(1311..1847)
                     /locus_tag="ACJE1S_001120"
     CDS             complement(1311..1847)
                     /locus_tag="ACJE1S_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HGG0806672.1"
                     /translation="MIVCAGGNENFSFAKTIGIGLVESTFHLTQLCLKEKPSKLIFIG
                     TCGLYDKGEILGIYKSSHACNIEFSYISDQFYTPANIEIKLNNQNVSRETIKVNSSNY
                     ICQNSKAAKEFAKLGFFAENMEAFSILSVAKNLDIDAECILCATNFCNENAHEDFIKN
                     HQKAKEKLEEYLKINHYI"
     gene            1932..2726
                     /gene="rsmA"
                     /locus_tag="ACJE1S_001121"
     CDS             1932..2726
                     /gene="rsmA"
                     /locus_tag="ACJE1S_001121"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HGG0806673.1"
                     /translation="MMKAKKHYGQNFLNDKSILSKIIQAIPKDTENIVEIGPGLGDLT
                     QELLKVSHVKAYEIDDDLIPILRKKFQKELDCGKLNLLHQDASKLACFDEKKYFLVAN
                     LPYYVASHLILQALEDKNCSGLIVMVQKEMALKFCAHSGESDFSALGVLSAMICEREI
                     LFDVEPECFNPPPKVVSAVMKMIKFRAYQDLCEIHAFKAFLKDCFKAPRKQLLGNLKI
                     HKAKLTELFQELKLNLNLRPHELCVDSYLKIYEKVKEEYERKQQRK"
     gene            2701..4731
                     /locus_tag="ACJE1S_001122"
     CDS             2701..4731
                     /locus_tag="ACJE1S_001122"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HGG0806674.1"
                     /translation="MNENNKGNSENTNNPNSNSKNNKRYKYRNRRKKLADSISENSQN
                     STHEFSNNEKINTKKNSTNTQPLEGENVEKPSEKKKKRNRNLPSKLTGNEDWQIALAE
                     CIEANRISHENRLHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMS
                     FPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPL
                     ALGMISNKFEEHGLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKA
                     GTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGP
                     TFDQIFARTKGRVIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGY
                     IKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVII
                     SAKAIPGNEASVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFL
                     PVHGEYNHITKHKETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQ
                     INKQIADDVVIDRQKLADSGIVVIIAQLDKASKTLINKPRVFSYGLVADKQDHAFSKE
                     MAEVLGQFFVNVKDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            4773..5534
                     /locus_tag="ACJE1S_001123"
     CDS             4773..5534
                     /locus_tag="ACJE1S_001123"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG0806675.1"
                     /translation="MRINKFISHNSPYSRREADELIKQGLVKINNKIALLSDEVKTND
                     KVFVKGKALRKKTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDF
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKYRYLENGEYEKLRDFLKFNEIRY"
     gene            5732..6043
                     /gene="rpsJ"
                     /locus_tag="ACJE1S_001124"
     CDS             5732..6043
                     /gene="rpsJ"
                     /locus_tag="ACJE1S_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HGG0806676.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            6053..6628
                     /gene="rplC"
                     /locus_tag="ACJE1S_001125"
     CDS             6053..6628
                     /gene="rplC"
                     /locus_tag="ACJE1S_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HGG0806677.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            6625..7239
                     /gene="rplD"
                     /locus_tag="ACJE1S_001126"
     CDS             6625..7239
                     /gene="rplD"
                     /locus_tag="ACJE1S_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HGG0806678.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGVLFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSALESITKEG"
     gene            7242..7523
                     /locus_tag="ACJE1S_001127"
     CDS             7242..7523
                     /locus_tag="ACJE1S_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HGG0806679.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLESMEA"
     gene            7525..8355
                     /gene="rplB"
                     /locus_tag="ACJE1S_001128"
     CDS             7525..8355
                     /gene="rplB"
                     /locus_tag="ACJE1S_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HGG0806680.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALISYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            8357..8638
                     /gene="rpsS"
                     /locus_tag="ACJE1S_001129"
     CDS             8357..8638
                     /gene="rpsS"
                     /locus_tag="ACJE1S_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HGG0806681.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTIIPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            8649..9056
                     /gene="rplV"
                     /locus_tag="ACJE1S_001130"
     CDS             8649..9056
                     /gene="rplV"
                     /locus_tag="ACJE1S_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HGG0806682.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVVVKSCRVDAGAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKTEAKKAVAKKTPVKKTSTKKVTAEKES"
     gene            9056..9757
                     /gene="rpsC"
                     /locus_tag="ACJE1S_001131"
     CDS             9056..9757
                     /gene="rpsC"
                     /locus_tag="ACJE1S_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HGG0806683.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLQKGLQTEKTE
                     ESAPAKKQRRTRRSK"
     gene            9760..10185
                     /gene="rplP"
                     /locus_tag="ACJE1S_001132"
     CDS             9760..10185
                     /gene="rplP"
                     /locus_tag="ACJE1S_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HGG0806684.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            10172..10357
                     /gene="rpmC"
                     /locus_tag="ACJE1S_001133"
     CDS             10172..10357
                     /gene="rpmC"
                     /locus_tag="ACJE1S_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HGG0806685.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     EVRKDIARINTAINALK"
     gene            10367..10618
                     /gene="rpsQ"
                     /locus_tag="ACJE1S_001134"
     CDS             10367..10618
                     /gene="rpsQ"
                     /locus_tag="ACJE1S_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HGG0806686.1"
                     /translation="MAFKREIQGVVVKIAGEKTASILVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            10618..10986
                     /gene="rplN"
                     /locus_tag="ACJE1S_001135"
     CDS             10618..10986
                     /gene="rplN"
                     /locus_tag="ACJE1S_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HGG0806687.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            10986..11219
                     /gene="rplX"
                     /locus_tag="ACJE1S_001136"
     CDS             10986..11219
                     /gene="rplX"
                     /locus_tag="ACJE1S_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HGG0806688.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            11223..11768
                     /gene="rplE"
                     /locus_tag="ACJE1S_001137"
     CDS             11223..11768
                     /gene="rplE"
                     /locus_tag="ACJE1S_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HGG0806689.1"
                     /translation="MMRLKEKYDQSIKPALVKEFDIKNPMLIPAIEKIVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMFAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKEAQKLLELIGVPFTKGK"
     gene            11770..11955
                     /locus_tag="ACJE1S_001138"
     CDS             11770..11955
                     /locus_tag="ACJE1S_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HGG0806690.1"
                     /translation="MAKKSMIAKAARKPKFKVRGYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            11965..12360
                     /gene="rpsH"
                     /locus_tag="ACJE1S_001139"
     CDS             11965..12360
                     /gene="rpsH"
                     /locus_tag="ACJE1S_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HGG0806691.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRVSKPGRRVYKGKEEIKRFKNGYGT
                     IVVSTSRGVLANDEAYKAGVGGEILCTIW"
     gene            12438..12974
                     /gene="rplF"
                     /locus_tag="ACJE1S_001140"
     CDS             12438..12974
                     /gene="rplF"
                     /locus_tag="ACJE1S_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HGG0806692.1"
                     /translation="MSRIGKQPIAIPSGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIIVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEITVDKNNVIIKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            12984..13340
                     /gene="rplR"
                     /locus_tag="ACJE1S_001141"
     CDS             12984..13340
                     /gene="rplR"
                     /locus_tag="ACJE1S_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HGG0806693.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIATEFAKVLKAKQIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            13352..13795
                     /gene="rpsE"
                     /locus_tag="ACJE1S_001142"
     CDS             13352..13795
                     /gene="rpsE"
                     /locus_tag="ACJE1S_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HGG0806694.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            13800..14192
                     /gene="rplO"
                     /locus_tag="ACJE1S_001143"
     CDS             13800..14192
                     /gene="rplO"
                     /locus_tag="ACJE1S_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HGG0806695.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIAKPYVINVEKITAVKELNEITIESIKSVHKISKSV
                     TKIKLIGASAKDLASKIKDENISVTGSK"
     gene            14192..15457
                     /gene="secY"
                     /locus_tag="ACJE1S_001144"
     CDS             14192..15457
                     /gene="secY"
                     /locus_tag="ACJE1S_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HGG0806696.1"
                     /translation="MNKALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDGMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMIENLNMFIALCAISMLAGTMLLM
                     WIGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFVILALILIT
                     IGVIIYVELGERRIPISYSRKVVMQNQNKRIMNYIPIKINLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTANYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFNFGGTSVLI
                     VVQVALDTMRKIEAQIYMNKYQTLNAIGL"
     gene            complement(15519..16778)
                     /locus_tag="ACJE1S_001145"
     CDS             complement(15519..16778)
                     /locus_tag="ACJE1S_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0806697.1"
                     /translation="MKKKSYKFHPNDTKLDKKMVEITEKSGFKIAVFSMAAMTMLGSV
                     VISSALPAINRHFEDILIQSGANMQTNFTLAHLDILVRLVLTLPAIFVVILSPFAGIL
                     MDKLGKLKFVFPAMIAWTLAGVSGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLIAMI
                     YLFEPRKFKFYNHTKIEEKTNYWKFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KFIGISMSISALCYGIFSLSYKYIMRFLSIKMIYIATLFIVGCSFLILFLIDDFIAVL
                     FALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQ
                     LGLVDAFLIWAILNFIVCIVFLFLKQR"
BASE COUNT         6236 a         2477 c         3231 g         4990 t
ORIGIN      
        1 tttgataaga gtatagtatc ataaaattat aatttgattg atatttaaat ttatcaaagc
       61 gcacatcgtt ttatttataa atttaaatat cttaaaattt caataaaaga tttattcaat
      121 tagcgattgc ttttatcttt agaaatcacc caaatcatac ccacaaaacc tatcaacaca
      181 acgacaaata taaaaatgat ttgaaaaata tccaaagctg tcataattct tttgcccttt
      241 ctttgagttg tccacaagct gctgaaatat caagtccctt gctctctctt atggtgcaag
      301 ttactccttt agcgcttaat aaatcttgaa atttgatcgc attttcaagc ttaggacgat
      361 gataaatact accctcgtga ggattgaaaa gtatcaaatt cactttggct tttataccat
      421 ttaaaagctt gaccagttct tttgcgtgtt caagtttatc attaatgcca tcaatgagta
      481 aatactcaaa cattactctt tttctttgat ctataggaaa agcacgcaca gcatccatga
      541 tcgcagctat attataagct ttatttatag gcatgagttc ggttcggagt tcatcattaa
      601 ccgcgtgaag ggagatggca agcaagacgc ctaaattcat ttcacccagc tctttgattt
      661 gctttgctaa accacttgtg cttatggttt gtctgcgagg gctgatagca agtccatcat
      721 tttgagagag aattttaact gccttggaaa catttttaag attgtcaaga ggttctccca
      781 tgcccatata gactatattg acacgacgct cataggggat attgttttgt tttttgatcc
      841 ataaaatttg tccgactatc tctcccgcgc tcaaatttct ttttaagcct cctttggcag
      901 taaggcaaaa actacagcca cttttacagc ctacttggga agaaacgcaa atagtatatc
      961 ttgtatgtga aattctttta ccctcttcgt caaattgttc ttctttcata ggcaaaagta
     1021 cactttctat ccttaagcca tcgataagtt caaaaagata tttgatactt ccatctttgc
     1081 tttgttcatt tttaacgcat ttaagaggag agaaatggta ggtttgcgca agttctaaac
     1141 gcaaatcttt tggtagactt gacatatcgg aaaaattatt tgcatatttt tgatatatcc
     1201 attgataaat ttgtttcacg cgaaacatag gcttgatttt ttcttccaat tcttcaggta
     1261 aaaagtctaa gatattaatg agttctttca agattgcttt cctttgattg ctaaatataa
     1321 tgattaattt ttaaatattc ttctagtttt tcttttgcct tttgatgatt ttttataaaa
     1381 tcttcatgag cattttcatt gcaaaaatta gtcgcacata aaatgcattc tgcatctata
     1441 tctaaatttt tagccacgct taaaatcgaa aaagcttcca tattttcagc aaaaaaacct
     1501 agttttgcaa attcttttgc tgcttttgaa ttttgacaaa tataattaga agaattgact
     1561 ttgattgttt cacgagaaac attttgattg ttgagtttga tttcaatgtt tgcaggagtg
     1621 tagaattgat cagaaatata agaaaattca atattacaag catgagaact tttataaatt
     1681 cctagaattt ctcctttatc gtaaagtcca catgttccta taaatataag ttttgaaggt
     1741 ttttctttta agcaaagttg tgttaaatga aaggttgatt ctaccaaacc tatacctatg
     1801 gttttggcaa aagaaaaatt ttcatttcca cccgcacaaa ctatcattca catatcctaa
     1861 aaataattta gcaagaattt tagctaaaaa ggcttaaaat taagaatttt tagctaaaat
     1921 aaaaaactat tatgatgaaa gcaaaaaaac attacggaca aaatttttta aacgataaaa
     1981 gtattttatc aaaaatcatc caagccatac ccaaagatac tgaaaatata gtagagattg
     2041 ggcctggctt aggtgatttg acgcaagagc ttttaaaagt ttctcatgta aaggcttatg
     2101 agatagatga tgatcttata cctattttgc gtaagaaatt tcaaaaagaa cttgattgtg
     2161 gaaaattaaa tttgcttcat caagatgcaa gtaagctcgc atgttttgat gaaaagaagt
     2221 attttttggt cgctaattta ccttactatg tcgcaagtca tttgattttg caagccttag
     2281 aggataaaaa ttgctcaggt ttgatagtaa tggttcaaaa agaaatggca ttgaaattct
     2341 gtgcccatag tggagaaagt gatttttcag ctcttggagt tttaagtgct atgatttgtg
     2401 aacgagaaat actgtttgat gtagagcctg aatgttttaa tccaccgcca aaagtagtat
     2461 cagcagtgat gaaaatgatt aaattcagag cttatcagga tctctgtgaa attcatgctt
     2521 ttaaagcttt tttgaaagat tgttttaaag cgccaagaaa acaattatta gggaatttaa
     2581 aaattcataa agctaaatta acagagcttt ttcaagagtt aaaactcaat ttaaatttac
     2641 gcccacatga actttgcgtc gattcatacc ttaaaattta cgaaaaagta aaggaagaat
     2701 atgaacgaaa acaacaaagg aaatagtgaa aatacaaaca atcctaactc aaattcaaaa
     2761 aacaacaagc gctataaata cagaaatcgt agaaaaaaat tagccgattc tatcagtgaa
     2821 aattctcaaa attcaactca tgaattttct aacaacgaaa agataaatac caagaaaaat
     2881 tctacaaata ctcaaccttt agagggtgaa aatgtagaaa aaccaagtga gaaaaagaaa
     2941 aaaagaaatc gcaatcttcc ttcaaaactc acaggtaatg aagattggca aatcgctctt
     3001 gcagaatgca tagaagctaa ccgtatttca catgaaaacc gcttacaccc tttaaaatat
     3061 aataattcta gcgagcataa aatccgcatc actcctttag gaggtttagg agaaattggt
     3121 ggaaatatca gtgtttttga aaccaataaa gatgcaatta tagtagatat aggtatgagt
     3181 tttcctgatg gaactatgca tggggtagat attatcatcc ctgattttga ctatgtaaga
     3241 aaaattaaag ataaaattcg tggtatagtg atcactcatg cacacgaaga tcatatcggt
     3301 gcagtgcctt atttctttaa agaattccaa tttcctatct acgctacacc tttggcttta
     3361 ggaatgattt caaacaaatt tgaagaacat ggcttaaaag cagaacgcaa atggtttcgc
     3421 cctgtagaaa aacgccgtgt ttatgagata ggcgaatttg atatagagtg gatccacatc
     3481 acgcattcta tcattgatgc ttcagcgctt gcgatcaaaa caaaagcagg aacgattatc
     3541 cacacaggtg attttaaaat tgatcaaact ccaatcgatg gctatccaac agacttagga
     3601 cgtttggcac attatggaga agaaggggtt ttatgtcttt taagcgatag tacaaattcg
     3661 tacaaagaag gttatacaaa aagtgaaagc tccgtagggc caacttttga tcaaatcttt
     3721 gcacgtacca aaggcagggt gatcatgagt acttttagtt ctaatatcca ccgcgtttat
     3781 caagctatca cttatggttt aaaatacggt agaaaagttt gtgtgatcgg tcgttctatg
     3841 gaaagaaatc tttataccac tatggaatta ggctacatca aacttgatag aaaaattttc
     3901 atcgatgctg atgaagtaag caaatataaa gacaatgaag tgcttatcgt aactacagga
     3961 agtcaaggcg aaaccatgag tgcgctttat agaatggcaa ctgatgagca taaatttata
     4021 aaaatcaaac ctacagatca agtgattatt tcagctaaag ccataccagg aaatgaagca
     4081 agtgtttctg cggtgcttga ctatctttta aaagcaggag ctaaagtagc gtatcaagaa
     4141 tttagtgaaa ttcatgtaag cggacacgct agtatagaag agcaaaagct tatgctaacc
     4201 cttactaagc ctaaattttt cctaccagtt catggagaat acaatcacat caccaaacac
     4261 aaagaaacag cgatgaagtg cggtatccct gaaagaaata tttatcttat gagtgatggc
     4321 gatcaagtag aactttgcca aaaatatgtc aaacgcataa aaaccgtaaa aacaggtaaa
     4381 gtttttgtag ataatcaaat caataaacaa atcgccgatg atgtagtaat tgatcgtcaa
     4441 aaacttgcag atagcggtat agttgtcatc atcgcacagc ttgataaagc aagtaaaaca
     4501 ttgattaata aaccaagagt atttagctat ggacttgtag cagataaaca agatcatgct
     4561 ttttctaaag aaatggcaga ggttttagga caattttttg tcaatgttaa agatgaagtg
     4621 cttaatgatc caagattttt ggaaaatcaa attcgtcaag tattgagaaa acatattttt
     4681 agaaagatta aaaaatatcc aaccatagtt ccaactattt ttgtaatgta aaatagggcg
     4741 tttttcgccc ttaaattttc ataggaattc aaatgagaat caataaattc atatcacaca
     4801 atagccctta ttcacgccgc gaagctgatg agcttatcaa gcaaggtttg gtaaaaataa
     4861 acaacaaaat agccctttta agcgacgaag taaagacaaa cgataaagtc tttgttaagg
     4921 gcaaagcttt gcgtaaaaaa acgcaattta gcgtgataat ctaccataaa caaaaaggtg
     4981 aaattgtcag taaaaaagac gatcgtggaa gaaaaactat atatgatacc ttgccaagac
     5041 aatttagtac ttggcttagc gtaggaaggc ttgactttgc tagcgaaggc ttacttttgc
     5101 ttacagattc tcctgtgatt gccgatgctt taatgcatag cgatttagaa agagaatact
     5161 accttaaagt taaaggcacg gtgagcaaac aagtcatcga agccatgcaa aatggacttg
     5221 agattaaaaa tgaaaaaaaa ggcgcacatg caaaaactaa aattacctct atgagttttg
     5281 ctccttttat agactttgaa atttttggat caagtggagg ctatactaag cttagagtgg
     5341 ttataaatga aggtaaaaat agagagctta gacgcttttt tggacatttt gatcttgaag
     5401 tcatggatct taagcgtgtt gcttttgggg ctttagatct tggtatgttg aaggcgggaa
     5461 aatatcgtta tttagaaaat ggcgaatatg aaaaattaag agatttttta aaatttaatg
     5521 aaataagata ttgaccatta tatacaaaaa tttaaaaaat aatgataatt tttaaattct
     5581 aaaaattcta tttttatcct ttttaaaagg aaaataatag aaaaatttca tcaaattcct
     5641 tgactttgaa aacaagattt tatatactct catttcaatt tttataaatt ggttagtttt
     5701 taactaacga gttcttttta aaggaaatat tatggaaaga attaggctta agctaaaagc
     5761 ttatgaccat cgagtactag acagaacagt tgcagcaatc gtagaagctg ttaaaagaac
     5821 aggtgcggat atcagaggtc cgataccaat gcctactaaa atcaaacgct atacagtttt
     5881 aaaatctcca cacattaaca aagattctcg tgagcagttt gaaataagaa ttcacgcgcg
     5941 tatgctagat atagtagcag cgactccaga tacagttgat tctttaacta agcttgattt
     6001 agcgccagaa gtaagcgttg aagtaagagc tatgggtaag taaggataag atatggaata
     6061 tattgtagaa aaaattggaa tgagcagaac aattactaat ccaagtatcg ctgtaacttt
     6121 actaagagtt gtaaatgcaa aagtatgtga agttgaaggc ggaaaggctt tagtagcata
     6181 tccaaaaggt aaagcaagta ataaatgtgt cgcaggacaa caaaaaaaat acaatctttc
     6241 tgcagaatac aatagatttg cgactttaga agtagcaaat actgaagcag gagatttaga
     6301 tgaaactcca ttaaatgaag caaaaatttt aaaagtaagc tttaacacta aaggtagagg
     6361 ttatagcggt gttatgaaga gacataactt cgcagggggt ccagcaagtc acggttctag
     6421 atttcacaga cgccatggat ctattggtaa tagagaatgg ccaggtcgtg ttcaaccagg
     6481 tatgaaaatg gcaggacact atggaaatac taaagtgacc gttaaaaacg aagttgtatc
     6541 ttatgatgct gaaaataaaa ttttagtagt taaaggtgca gtaccaggtt ataatggtgc
     6601 tatgggtaaa ataaggattg caaaatgagt aaagtagttg ttttaaatga taaattagaa
     6661 aaagcaggtg aacttgattt accttcaaaa tatgcggaag taaatccaca caatctttac
     6721 ttgtatgtaa aatcttacct tgcaagttta agagcaaata cagctcatac taaaggtaga
     6781 agtgatgtaa gtggtggtgg taaaaaacct tggagacaaa aaggtcgtgg cggtgctaga
     6841 gcgggttcaa caagaactaa cgtttgggta ggcggtgcgg ttgcttttgg tccaacaaat
     6901 gaaagaaact acttccaaaa agtaaataaa aaacaaaaaa gattggcgct tgaaagagct
     6961 ttagcagata aagcagctaa aggtgtgtta tttactgctg attctttggc tattgaaagt
     7021 ggtaaaacaa aagatgcaaa cgctgtgatt aaaaaacttg gcgtcaaaga tgctttaatc
     7081 gttaaagatt tactagatga aaaaacactt ttagcttaca gaaatttagc aaattgctat
     7141 gtagttgatg taactgaagt aaatgcttat ttagtatctg tatttaatgc tgttattatg
     7201 gaaaaatcag cgttagaatc tattacaaaa gagggataat tatggcagat attactgata
     7261 taaagactat actttacaca gaaaaaagtt tgaatttgca agagcaaggt gtcgtagtta
     7321 ttcaaacttc gccaaaaatg actaaaacag gcttaaaagc ggttttaaaa gagtattttg
     7381 gtgtaactcc aaaaagcatc aattctttaa gaatggatgg aaaagttaag cgttttagag
     7441 gtcgtttagg tcaaagaaac gattataaaa aattctatgt taagctacct gaaggtgtta
     7501 gcttagaaag tatggaggct taagatggca attaaaactt ataaaccata tactccaagt
     7561 agaagatata ttacaggttt aagctctgaa gatattacag caaaaccaag tgtacgctct
     7621 ttacttgtga aacttccagc acacgcagga cgcaatagct acggaagaat tacaagtcgt
     7681 cataaagaag caggagcgaa aaaactttac agaattatcg attttaaacg tcgcaaattt
     7741 ggtatagaag gaaaagtaga agcgatcgaa tacgatccat atagaaattg tagaattgct
     7801 ttgatttctt ataaagatgg tgaaaaaaga tatattcttc aaccacgcgg actcagtgtt
     7861 ggtgatatcg ttgcagctgc tgaaagtgga cttgatataa aaccaggtaa tgcaatgaaa
     7921 cttaaaaaca ttcctgtggg tactattgtt cataatgttg agttaaagcc aggcaaaggt
     7981 ggtcaaatga tccgctcagc aggagcttat gcgcaactta tgggtaaaga agaaaaatat
     8041 gttatcttaa gacttgcaag cggtgaaatg agacaagttc tagctgaatg tatggcaagt
     8101 ataggcgaag taggtaacga agaatgggca aatgtgacta tcggtaaagc aggtagaaat
     8161 cgccatagag gtatccgccc acaaactcgt ggttcagcta tgaacccagt agatcacccg
     8221 cacggtgggg gtgaaggtaa gaaaaattca ggccgtcatc cagtaactcc atggggtaaa
     8281 ccaaccaaag gtgcgaaaac tcgtcgtaaa aaagctagcg ataagctaat aatttcaaga
     8341 agaaaaggaa agtaagatgg ctagatcact aaaaaaaggt ccttttgttg atgatcatgt
     8401 aatgaaaaaa gtcatcgctg ctaaaaaggc taatgataat aaacctatta aaacttggtc
     8461 tagaagaagt actatcattc ctgatatgat aggtttaact ttcaatgttc ataatggcaa
     8521 aagttttatt cccgtttata tcactgaaaa tcatatcggt tataaacttg gcgaatttgc
     8581 tccaacacgc acatttaaag gccataaagg ttctgtgcaa aagaaaattg gtaagtaagg
     8641 gataagatat gagtaaagca ttaattaaat tcataagatt atctccaact aaagcaagat
     8701 tgattgctag agaagttcag gggatgaatg cagaattagc tatggctagt ttaaaattta
     8761 tgccaaacaa gggtgccaaa tatatcgcaa atgcaatttc aagtgcagta gcaaacggcg
     8821 gttttgaagc gaacgaagta gtggtaaaaa gttgtcgtgt agatgctggt gctgtattaa
     8881 aaagatttag accacgtgct agaggaagtg caagccgtat tagaaaacct acttcacata
     8941 tcttagtaga agtagcgaaa gcggaagtta aaactgaagc aaaaaaagca gtagctaaaa
     9001 aaactcctgt taaaaaaaca agtactaaaa aagtaacggc agaaaaggaa agctaatggg
     9061 acaaaaagta aatccaatcg gtctaagact aggaattaat agaaactggg aatcaagatg
     9121 gtttccaact aaggcaaatt tagtggaaaa tatcggtgaa gattacaaaa tcagagcttt
     9181 cttaaaaaga aaactttatt atgcgggaat cagccaaatt ttagtagaaa gaactgctaa
     9241 aaagcttcgc gtaactgttg tagctgcaag accaggtatt atcattggta aaaaaggtag
     9301 cgatgttgat aatttaagaa aagaattgca agatttaatc ggtaaagatg taaatatcaa
     9361 catcaaagaa gaaagaaaag cgggtgcttc agctcaactt gctgctgaaa gcgttgcaac
     9421 tcaacttgaa aaaagaatcg cttttagaag agcaatgaaa aaagtaattc aaggcgcaca
     9481 aaaagcaggt gctaaaggga ttaaagtttc agtttctggt cgtttaggcg gtgctgaaat
     9541 ggcaagaact gaatggtatc ttgaaggtcg tgtgccactt catactttaa gagcaaaaat
     9601 cgattacggt tttgcagaag ctagaactac ttatggaaac ataggtgtta aagtttggat
     9661 ctttaaaggt gaagtattgc aaaaaggctt acaaactgaa aaaacagaag aaagtgctcc
     9721 agctaaaaag caaagacgca caagaaggag taaataatca tgttaatgcc aaaaagaact
     9781 aaatatcgca aaatgatgaa agggcgtaac agaggttatg ctaatcgtgg aactgaattt
     9841 acttttggtg aatttgcatt aaaagcaact gaagcaggac gcattaattc acgccaaatt
     9901 gaagcagcgc gtatcgcttt aactcgtttt gttaaaagac aaggaaaaac ttggattaga
     9961 gttttcccag ataagccttt gacaaaaaaa cctttagaaa ctcgtatggg taaaggtaaa
    10021 ggtgctgttg aggaatgggt aatgaatatc aagccaggtc gtatcattta tgaaatggca
    10081 ggagtaagcg aagaaatggc aagagaagca ttgactttag ctatgcataa acttccattt
    10141 aaaactaagt ttgttacaag agagagccaa aatgaaatat actgagatta aagataaaac
    10201 agcagctgag cttgcaacaa tgctaaaaga aaaaaaggtg cttttattca ctttaaaaca
    10261 aaagctaaaa acaatgcaac ttactaatcc aaaagagatt agcgaagtta gaaaagacat
    10321 tgctagaatc aatacagcaa ttaacgcttt aaaataagga taaaaaatgg catttaaaag
    10381 agaaatacaa ggcgttgttg tgaaaatcgc aggtgagaaa acagcgagta ttttggttga
    10441 aagaaaagtg gttcatccaa gatatagaaa aattgttaaa cgctttaaaa aatatctaat
    10501 tcatgatgag agaaatgaag ttaaagtggg agataccgtt gtggcggttg aatgtagacc
    10561 actttctaaa agaaaatcat ttcgcttaaa atctgtatta gctacaggag ttgagtaatg
    10621 attcaaagtt ttacaagact tgcagttgct gacaatagcg gtgcaaaaga attaatgtgt
    10681 attaaagttt taggtggtag taaaagaaga tatgctactg taggcgatgt aattgttgca
    10741 tctgtaaaaa aagctttacc aaatggtaag gtaaaaaaag gtcaagtagt aaaagcagtt
    10801 atcgttagaa ctaaaaaaga aattcataga gataatggtt ctttgattcg ttttgatgaa
    10861 aatgctgcag ttattcttga taacaaaaga gaacctatcg gaactcgtat ctttgggcca
    10921 gtgggtagag aagttagata tggtggcttt atgaaaattg tttcactagc accggaggta
    10981 ttataatggc ggttaaatta aaaatcaaaa aaggtgatag cgttaaagtt atcacaggtg
    11041 atgacaaagg taagacaggt aaagtgttag cagtatatcc aaaaacactt aaagtagttg
    11101 ttgagggatg taagattgct aaaaaagcta taaaacctag cgagaaaaac ccaaatggtg
    11161 gttttatcaa taaagaaatg ccaatggata tttccaatgt ggcaaaagtt caggagtaag
    11221 cgatgatgag attgaaagaa aaatacgatc aaagcatcaa acctgctttg gtaaaagaat
    11281 ttgatattaa aaatcctatg cttatccctg cgatagaaaa aatcgttatt agcgtaggtg
    11341 cgggtgagct tgctaaagat caaaaagtat tgcaaaatgt tgcagatact atttctttga
    11401 tagcaggaca aaaggctgtg attactaaag ctaaaaaatc agttgcagga tttaaagtgc
    11461 gtgaaggttt tcctgtaggt gtaatggtaa ctttaagaaa agaaaatatg tttgcttttc
    11521 ttgataaatt aatttctatt gctttaccaa gagtgaaaga ctttagaggt ttaagtagag
    11581 atggttttga tggaagagga aattacaatt tcggtcttga tgagcagttg atgttcccag
    11641 aagttgagta tgataaaatt ttaagaactc atggtatgaa catttctata gttacaacag
    11701 cacaaaacga taaagaggca caaaagttgt tagaacttat cggtgtgcca tttacaaaag
    11761 gaaagtaaga tggctaaaaa atcaatgatt gcaaaagcgg cacgcaaacc taaattcaaa
    11821 gtaagaggct atacaagatg ccaaatttgt gggcgtccgc attcggttta tagagatttt
    11881 ggaatttgta gagtttgcct aagaaaaatg ggtaatgaag gcttgattcc aggtcttaaa
    11941 aaagcaagct ggtaaggaaa taaaatgata aatgatataa tttcagattc actaacaaga
    12001 attcgcaatg ccggaatgag aaagcttgaa acaaccaagc ttttgcattc taaagttgtt
    12061 gaagctttag ttggaatttt ccaagctaaa gggtatattg aaagttttaa tgttatcgaa
    12121 gaagataaaa agaaatttat caatgtagtt ttaaaatacg atgaaaaagg taaaagcgtt
    12181 attaacgaac ttaaaagagt ttctaaacca ggtcgtcgtg tttataaggg taaagaagaa
    12241 attaaaagat ttaaaaacgg ttacggtact atcgtagtta gcacaagtcg tggcgtttta
    12301 gcaaatgatg aagcttataa agcaggtgtt ggcggcgaaa ttttatgtac catttggtaa
    12361 aaatctgctt tttatggcat tgggtatcca ttcttttaaa aaagtagaaa tatcctagac
    12421 aaataaaaag gaaaaatatg tctcgtatag gtaaacaacc aatcgctatc cctagtggag
    12481 tagaggttaa actagaagga aatttgctta aatttaaaaa aggaaattta gcaaaagagc
    12541 ttgatacaaa agcaaatgta aatgttgaga ttaaagataa taatattctt ttttctccaa
    12601 aaggtgaaga tagacaaagt agagcatatt ggggaactta tagagcttta gcttacaata
    12661 tcattgtagg cttaactcaa ggtttttcaa aaactcttga aatcaacgga gtgggttata
    12721 aagctgcttt aaaaggtaaa gttttagaat taagccttgg tttttcacat cctatcaact
    12781 atgatattcc agaaggaatt gaaatcactg tggataaaaa caatgttatc attaaaggaa
    12841 gtgataaaca agtagtagga caagttgctg ctcaaattcg tgaatttaga ccacctgagc
    12901 catataaagg aaaaggcgtt aagtattctg atgaacgcat tatccgcaaa gctggtaaga
    12961 catctaaaaa gtaaggatag gcaatgagag caaatgtact aaaaagaaaa ctaactttaa
    13021 gaattaaaag aaaaaaaaga attagagcaa aaatttcagg atgtgaaaac ttcccaagaa
    13081 tttctgtttt taaatcaaat agaactcttt atatccaagc gattgatgat gttaaagctg
    13141 taactttagc agcagtagat ggacgcaaac ttggcgttaa agcaaacaaa gaaggtgcta
    13201 aaaaaatcgc tactgaattt gctaaagttt taaaagctaa gcaaatagaa caagctgtgt
    13261 ttgatagaaa tggttatgta tatcacggag taattgcagc attagctgaa tctttaagag
    13321 aaaatggcat taggctataa ggggtaaatc gatggaaaaa tataatagag aagaatttga
    13381 agaagtaatc gtcgatatcg gcagagttac taaggttgtt aaaggtggta gaagatttag
    13441 atttactgct ttagttattg ttggaaaccg caaaggttta gtaggtgttg gttatggcaa
    13501 ggctaaagaa gttcctgatg ctattcgcaa agcagttgat gatgcattta aaaatatcgt
    13561 tgaagtaaaa actaaaggat caactattgc tcacgatgtt gaagtaaaat acaacgcaag
    13621 tagaatttta cttaaaccag ctagcgaagg tacgggagtt atcgcgggtg gttctactcg
    13681 tcctatcgta gagcttgcgg gtattaaaga tatcttaact aagtctttag gttcaaataa
    13741 ttcagctaac gtggttcgtg ctacaatcaa agctttaaca atgctaaaag gataagaaga
    13801 tgaatttgac aaaagcagcg ggatcaacgc ataaaaccaa aagaataggc cgtggccaag
    13861 gaagtggaat gggtaaaacc gccactaaag ggggcaaagg tcaaaccgct agaaagggtt
    13921 ataatgaaaa aagaggtttt gaaggaggtc agcaacctct tcaaagaaga ttaccaaaag
    13981 ttggttttac ttctaaaatc gcaaaacctt atgtgattaa tgttgaaaaa atcacagccg
    14041 taaaagagct taatgaaatt acaattgaaa gcatcaaaag cgttcataaa atttcaaagt
    14101 ctgttactaa aattaaatta atcggtgcaa gtgcaaaaga cttagcatca aaaattaaag
    14161 acgagaatat cagcgtcacc ggatcaaaat aatgaataag gcattgacga ataagatttt
    14221 aatcacctta gctttcttgt ttgcttatag ggttctggct tatgtgccag ttcctggcgt
    14281 caatgctgat gtgattgcgg aattttttaa caataatcaa aacaatgctt tgggtttatt
    14341 taatgttttt agtggtgggg cagcagaacg cttttctatc atttctttag gtattatgcc
    14401 ttatattact gcttcgatta tcatggagct tttagcagct actttcccaa atatcggtaa
    14461 aatgaaaaaa gaacgcgatg gtatgcaaaa atatatgcaa attatccgtt atgcaactat
    14521 agtaatcact ttagttcaaa gtatcggtgt ggctatagga cttcaaagtt tacatggaag
    14581 aggtggagca ggcgctataa tgatagaaaa tttaaatatg tttattgcgc tttgtgcaat
    14641 ttctatgctc gcaggaacta tgcttttgat gtggataggt gaacaaatca cacaaagagg
    14701 tataggaaat ggtatttctt tgattatttt tgcaggtatt gtttcaggaa ttccaagagc
    14761 tatttcgggt acagtaggac agataaattc aggcgaaatg aatttcttaa ccgcttttgt
    14821 tatccttgct ttgattttaa tcactattgg cgtgattata tatgtagagc ttggagaaag
    14881 aagaattcct atttcttact cgcgtaaagt agtaatgcaa aatcaaaata agcgtattat
    14941 gaactatatt ccaattaaaa tcaatttaag tggagttatt ccgccgattt ttgctagcgc
    15001 tattttaatg tttcctacga ctattttgca aacaagtaca aatccgtatt tgcaagctat
    15061 caatgacttt ttgaatccaa atggttattt atttcatgtt ttgactttct tgtttgtaat
    15121 tttctttgcg tatttttatg cttctatagt atttaatgct aaggatatag cggaaaatct
    15181 taaaaaacaa gggggtttta tccctggaat tcgtccaggc gaagggacag caaattatct
    15241 taatgaagta gcttctcgtc ttactttatc gggttctatt tatttaggac ttgtagcaac
    15301 cttgccttgg gttttggtta aattcatggg tgtacctttt aattttggag gtacttctgt
    15361 attgattgta gttcaagttg cattggatac aatgagaaaa attgaagctc aaatttatat
    15421 gaataaatac caaaccttaa atgcaatagg tttataaact tttaacacaa ggaggagata
    15481 tctctttgtg ttttatactt tctataaaaa gcgatttttc atctttgttt taaaaataaa
    15541 aatacaatac aaactataaa atttaaaata gcccatatta aaaacgcatc aacaagtccc
    15601 aattgtctta ctataggctg agagataatc gggcttaaga attgccctaa aaatatacaa
    15661 ctagctaaaa ttccataagc tctagctcgt gcattttcag gacagattga aaaaagataa
    15721 gcagtgttat ttacaagcat gatacctcca cccattccaa gcaaggctaa agcaaataaa
    15781 acagcgataa aatcatcgat caaaaagagt atcaaaaaag aacagcccac aatgaataaa
    15841 gtagcaatat aaatcatttt aatacttaaa aaacgcatga tatatttgta acttagagaa
    15901 aaaataccat aacaaagtgc agaaattgac attgaaatcc ctataaattt aggatctaag
    15961 cctagatgct cttctatata ataaggaagt tgtgtagggg atatataata aaccaccatg
    16021 ataaaaaatc ctataaaata aataggaaaa aatttccagt aattagtttt ttcttctatc
    16081 tttgtatgat tgtaaaattt aaattttctt ggctcaaaaa gataaatcat ggctatgagg
    16141 gtgattaaaa ttccaagccc ataaaccaaa aaaggataac gccaagaata actcgaaaca
    16201 aagcccgcta tagagataaa cactgcacca cctaccgcac aaaaaaatcc ttgaagactt
    16261 aaagcatttt ctctacggtt aaagccacca cgactataat aatctcccag caaagccgaa
    16321 gcacccgtca ttataaaagc cgttgccata ccaaaaatag ctcttgaagt cagtatagca
    16381 taaatatcat ttaagaaaaa gccacttact ccagcaagtg tccaagcaat cattgcagga
    16441 aaaacaaatt ttaatttacc cagtttatcc attaaaattc ctgcaaaagg agataaaatc
    16501 acaacgaaaa tagcaggtag ggttaatact aaacgcacta aaatatcaag atgtgctagg
    16561 gtaaaatttg tttgcatatt tgcacctgat tggattaaaa tatcttcaaa atgtctattg
    16621 attgcaggca gtgctgatga gattaccacg cttcctagca tagtcattgc cgccatggaa
    16681 aatactgcga ttttaaagcc tgatttttct gtgatctcaa ccattttttt atctaatttt
    16741 gtatcattgg ggtgaaattt ataagatttt ttcttcatat ttgaaccttt ttagttttat
    16801 tatactcaaa aaattttctt ttgtatttaa aattacttct atttgtaatt tatactcctg
    16861 tttttcattt gtatagataa aatatctttc attataagta gaatttcaaa aatttttagc
    16921 taaattcagc tttt
//
LOCUS       DBBXOW010000037        15798 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.038, whole genome shotgun sequence.
ACCESSION   DBBXOW010000037 DBBXOW010000000
VERSION     DBBXOW010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15798
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.038"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..691
                     /locus_tag="ACJE1S_001146"
     CDS             <1..691
                     /locus_tag="ACJE1S_001146"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806698.1"
                     /translation="MNFKRASELLQIANNYNIEVSEVFSALKQALEVVLKCGKLHADF
                     SNEKISFYEIIYNRFGEKRKKFVQIKRNNYKAVQDRFISIVISYSLEKKREQVKSLKS
                     MIFKGKIEKVLKSGFEVSSSIGFGFLPKVEILRKDLARMQLGTELYLAIKKFKGSKKA
                     PNGALVFTRKNMNILEHEIIDNMSDCGVYYIEKISARKISIFCTKMPTKDQIKNTMRA
                     ANTFLDIQVRN"
     gene            710..1258
                     /locus_tag="ACJE1S_001147"
     CDS             710..1258
                     /locus_tag="ACJE1S_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HGG0806699.1"
                     /translation="MNNVVFINNQEVVFENKDEQVFCTSLDVAKVFGKNHFHVLRDIE
                     NILNNLRKIGTSQDLSNFGLVKYKDKKGELRPVYQISRDGFSLLAMSFTGKKALQWKM
                     LFINAFNEMENIIRSNNQTTNYSDYEFIKKQNEILNQITCTQSSTIYVLQDSIRFLNN
                     TISSMKEINKELKKIAGIDRFL"
     gene            1276..2079
                     /locus_tag="ACJE1S_001148"
     CDS             1276..2079
                     /locus_tag="ACJE1S_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806700.1"
                     /translation="MENGSGNIGNKGDINSYGSGRFAHPNLDFGELKERQGGSGRHIF
                     HALSEIQRYHVIEDRSEEIPKEYFTIEQILDYLKIGFKSGMFESFIFTGLLCFLQVIY
                     PSYKYYFLDSPLSKNEELFFDLLSYAPILVSTLFMAYISKYYKGLLTRRAIFALMNGR
                     SFSFLLKGFAIFWLFSWLKEISINNPRTVYSWADWTLWLIQYFKPNVSTEQLYVFYYK
                     YAIPALHDASYELLYSMCIFAILPYLTIFYKGYKERVKRFENKDAYENY"
     gene            2097..2837
                     /locus_tag="ACJE1S_001149"
     CDS             2097..2837
                     /locus_tag="ACJE1S_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HGG0806701.1"
                     /translation="MNLENSLQAEVVNNSNIVLFENEELGQVRVALDENNEPLFCLSD
                     ICKILDIQDTYKVKQAILREFELSTLSVDSFDTGFGIKEFTMITEPQLYFVLMRSDKP
                     NAKHFRHWVTKEVLPSIRKKGFYGSINKNNTTIDSNIYYKELCDRLLIENKELKSENI
                     NLKRHINGELYLEFLNKLNTFSKIHFKNSKSKALDYIYKTIAIEFMCPTYSNFDISDL
                     ESDPRYLRYAIDLCNDAISNNFLSRKLI"
     gene            2852..4219
                     /locus_tag="ACJE1S_001150"
     CDS             2852..4219
                     /locus_tag="ACJE1S_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /protein_id="HGG0806702.1"
                     /translation="MFLKKSEEEKTFIGIGFDLEDKKQEKLLEIYQIDDNSKNHTFVF
                     GSTGVGKTRLIEGLIEQDIPKGKNVVIIDPKGDIGLFSKMVEIAKKSNREKELMFLSP
                     IYPEYSIKINPLANYYMEEEIIAHIVSGVPAKDEFFYNVANETTTAVVKALLIIRRYE
                     KLEKPLNFEEIAEKVYYEGLKELQSELKEIQSNGFEDDEIARLLALYDRVLSSPQDYF
                     AKVSSTLRTTLTQMTMGNVGKIIGTAQENTFIKRLQENQGVLLYIMTGSMLTRQVSSI
                     ISKVTISMIQSCVGRVYASGKKFDKTLKIYIDEAASSVYRGIETLYAQARGAGVAIMG
                     LTQSAADLAAEIGQDGANRLLELTNTKIIMRLNDTKSSKMISDLGGKKRAYSYFLTVE
                     GGITSREVEELNIEVDDVTNLQKREFFYFGFEGRFKGKTLKVNDGKLVVDMPNVTQKN
                     EDFNV"
     gene            4212..6617
                     /locus_tag="ACJE1S_001151"
     CDS             4212..6617
                     /locus_tag="ACJE1S_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HGG0806703.1"
                     /translation="MFDLIENVMSFIYRHQLIRKVVWQIIITFVSIFLFLTFLFWVNL
                     EKMGYSSFNFSLLLNLQAYIFLLWEYSREIACFLIIEQAFFILLLWYMNNKLKNPSND
                     KEVAHIHIKELAKIWLEDDNTPMIDTSRQATEKANIIMVNKQVRDSIISLANLKQDIS
                     QIFLNDIIKPNLEKIHPKHLEMIIKLLQLLEENIACPSVVQLFEGDPNSAYGKISARR
                     KDGERVDTVTLDGKTRFDIYEKISLLRHSLNVAYKIIELLNESKEYKSFKKTLFGKAI
                     IVALGHDIGKINNFTLRESYIKEQRLKGDSKQAFMNLKRMQEHQKISYIIFYELFKNY
                     PDLKELATVVQGHHLGSIDKDDKLLKLLIDADKQTRDYELDAYLQNSEEFEKIRNKEL
                     ESIITTVPQKNNLAHENTQKTISKTPEKKTQTIQNKTQNESTENEISILDLKELQDRF
                     VLNFNEFKKQFFLFVAEDNSKEFQELVYTFAFKNTEKEFYKNKKDLFILVECGVINGN
                     RTDTMNYFYDLSDEINKKLNKKIKIGFAMFRDCKDINEAIDGCKKALEYAKNNNQVVY
                     YDYKDLKISNSDKILISDNAEVKITESVKIQEKTDTITTNNQVNTLEEIDTLKQKTID
                     TQIIENMFEMIESKVQEVEYSLSQEENFDIPLIEAKFIEIIKSKINTFKRKGFAKIPQ
                     AISFKRFVLFSHECLLESLAKALNVKNENLNAKLNFLIRYYRNHPDENKRLIWFVNVE
                     KGFYYSTYILKFDERQDEVFFCVPFDGKRAFGMSISELSIHKDNSGLRNCIVKPYVKK
                     EEK"
     gene            6614..6910
                     /locus_tag="ACJE1S_001152"
     CDS             6614..6910
                     /locus_tag="ACJE1S_001152"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806704.1"
                     /translation="MKKRRADLLKKHNSKIVLADTLESEAMVDLAMKANDIFLKLKKT
                     AGVGLDFKDADEMLMLWNLVLVKSSQTLEQISQKIDMKYDEPFTITLAREKLEK"
     gene            6907..7347
                     /locus_tag="ACJE1S_001153"
     CDS             6907..7347
                     /locus_tag="ACJE1S_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG0806705.1"
                     /translation="MKAIFFLTSLLFANLLFAQKNYFIQAGEKFGINPQLLWTIAYKE
                     SRLTPNIISKPNKNGTYDIGIMQINSIHLPRLKKQYGINENDLLRPKINIFVGAEILK
                     MCLDKHGLNEEGITCYNGRIINNPYGKEVIKLLKKARITNGKIN"
     gene            7366..8262
                     /locus_tag="ACJE1S_001154"
     CDS             7366..8262
                     /locus_tag="ACJE1S_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HGG0806706.1"
                     /translation="MNNLLEKNINEVNEMLIKSLDDLPPLPETIQKLQEYIATHGSNI
                     VIDEIANIISTDPLITANLLHLTNSAYYGFSKEIKTVNQALVLLGVSNVKNMIIADYA
                     KSSFVINLSPYGIETDRFLALIHEQTNFISTWLMEEDKMLCHNLIPCVMMLRLGIMVF
                     SNFLIQNNIDKKFLLHLSKNNFNNILRLEREFLGVDHISFLSNLFKVWNLDEDLIEII
                     NSLDYLGSTSAKVKKETYALAAIEALFSPEKNAYDEFCVQKAYQILKDAKANGVDFNL
                     ENFLNKLPEKFIEILSKSKEQL"
     gene            8259..8474
                     /locus_tag="ACJE1S_001155"
     CDS             8259..8474
                     /locus_tag="ACJE1S_001155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806707.1"
                     /translation="MNIVDLVKTIENIENPQNLKITREGACFYMCLGENKKYFYFFKA
                     NSKNKESLPYTLTLDDLKSDEWKILKD"
     gene            8476..8745
                     /locus_tag="ACJE1S_001156"
     CDS             8476..8745
                     /locus_tag="ACJE1S_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806708.1"
                     /translation="MNTIQKLRRELKIYTAGIIVLPILSIVSYIFNNQKLDYNFLIFF
                     ALYFGLFFGFCVIGFFSTKKAIKTYSQLIEKSQEEFGEKNENHRI"
     gene            8726..11623
                     /gene="cas9"
                     /locus_tag="ACJE1S_001157"
                     /gene_synonym="csn1"
     CDS             8726..11623
                     /gene="cas9"
                     /locus_tag="ACJE1S_001157"
                     /gene_synonym="csn1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01865.2"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HGG0806709.1"
                     /translation="MKIIGFNLGIANIGWALRENDEIIDCGVRVFDIPENPKNGNSLA
                     LERRENKARMKIVKRKKARMLATKTFLKKELNVDLSKLFLIGSTQSIYELRTKALSSL
                     ISKEELSAIILHIAKHRGYDDSALKNENGTIIEALNKNKETMLKFKSVGEYFYKNFVQ
                     NKEVKKIRNTTEDYFNSVPRSLLKQELDLILDKQKELGLIKNADFKEKLFEIIFFKRP
                     LKDFSNKIGNCIFFENEKRAAKNTISACEFVALGKVVNLLKSIEKDIGIVYEKDSINE
                     IMSIILDKTSISYKKIRDILNLPQDINFKGLDYSKNNAENSKLVDLKKLNEFKKALGD
                     GFANLDKDILDSIATDITLTKDTATLKEKLKNYNVLNAEQIEKLSELVFNDHINLSLK
                     ALKQIIPLMYEGKRYDEACELCNFTIAKNQEKSEYLPLFEKTRFAKDISSPVVIRAIC
                     EFRKLLNDIIRRYGSVHKIHLELTRDFGISFNDRKKIIKEIEQNEQSRIKALETIKEL
                     KLEETSKNIQIVRLFEDQKGICPYSGLKMDLKCLDELVIDYIRPYNRSLDDSYSNKVL
                     TFKKLNDLKQGKTPFEAFGEDEKLWAEINERIKEYNGKKRFKIFDKFFKDKKPFDFTE
                     QTLQDTRWLTKLVASYLNEYLSFLPISEDENTALGYGEKGSKQHVILSSGMITQMLRN
                     FWYLGFKNHKDYKNNAMDAIIVAFTTNSIIFTFNNFKKELDLAKAEFYANKISESDYL
                     LKRKFLPPFSGFKEQALEKVKNIFVSHSLKIKNKGTLHELTPLKIKELKNTYGDLDLA
                     VKLGKIRKYNDKYYANANGSLVRSDLFIDKKNKFHAVPIYKADFSTKKLPNKTPATTS
                     NGETKEGIEMNENYNFCMSLYKNTPISVKIKGMKESIICYYHGFNTSGSKITYKKHDN
                     NYHNLSEDEMVVFRKNDKESIAVGKILEIKKYSISPSGELSLIENEKRKWF"
     repeat_region   11683..11982
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=11683..11718
                     /rpt_unit_seq="attttaccatataaacaattaataataggctaaaac"
     gene            complement(12003..12323)
                     /locus_tag="ACJE1S_001158"
     CDS             complement(12003..12323)
                     /locus_tag="ACJE1S_001158"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806710.1"
                     /translation="MNNDVQISQITNIPYFTIRDWKQKKDNWRGKIYLFLKNTNQEEL
                     KEIFSNSINSSNTGLSDSKIAKITTIPLPTLNTWKKDKSTYRKKIYDFLKSCDESRLR
                     NIFL"
     gene            complement(12313..12654)
                     /locus_tag="ACJE1S_001159"
     CDS             complement(12313..12654)
                     /locus_tag="ACJE1S_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806711.1"
                     /translation="MNKISKEELQKATEESLTNVYSYDPNSPSGYRKDLFDISNEDFI
                     EKYEFIDSPTSDDMVKCKQSDEVFQVFYKKDGKIRLLRVSNVQALNHFDKLKGVMTKI
                     ILDSGFKPDEQ"
     gene            complement(12656..13102)
                     /locus_tag="ACJE1S_001160"
     CDS             complement(12656..13102)
                     /locus_tag="ACJE1S_001160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806712.1"
                     /translation="MRNKELKIIEAYGAFMSILFSFLIVYENVWTNILKIFLYTEIQA
                     FFIFFVRIFMILHMILFMGFLLDAKIKAEHNQLIKLLADKKKKLTVIFLIPLQISFLC
                     SVVLVFFCNIFPNIHSLDFSFYTIFICVILLYNLILLYNFTKIIRS"
     gene            complement(13092..13487)
                     /locus_tag="ACJE1S_001161"
     CDS             complement(13092..13487)
                     /locus_tag="ACJE1S_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806713.1"
                     /translation="MIVLIFKILGFIGLWISVIVLFFNPPLGAIFMLLASLLTVVGMI
                     IEEGNTINLSYPIMEWIWNVGKYVLVIFAIMMVFAVVLELIKKIKSNKRVNKKIDIKN
                     KEEQDYKILIIDNTMEDLLVLKKESLYEK"
     gene            complement(13489..13881)
                     /locus_tag="ACJE1S_001162"
     CDS             complement(13489..13881)
                     /locus_tag="ACJE1S_001162"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806714.1"
                     /translation="MKLYMNSDKLNSIENNKLRAIYKDIKEKLIDIIVYMDTINLGNI
                     SKGYIEKELNSIILILNQNCKEYFLIKNKLHTSDLERNEERLVQQAQKLFDKLKNLDF
                     KKEINIEKDIKLDHIENSLDNSIKNGVQ"
     gene            complement(13898..14743)
                     /locus_tag="ACJE1S_001163"
     CDS             complement(13898..14743)
                     /locus_tag="ACJE1S_001163"
                     /inference="COORDINATES: protein motif:HMM:NF015347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HGG0806715.1"
                     /translation="MFELSNELALSFEKIGLYFFIFIISIQTLFIFWSFITSFDFCKK
                     YWKESITFGLKTLMVEKFKKDKVITVVSQNPKILIIDNTMEDLLALKRESFIVEEVKI
                     IKKYKYTPKTKEELKALVKDESIYLGDIDTSEITDMSYLFTGSTRTNFSGIEKWNTGK
                     VKTMRSMFECNKFFNEDIGAWDVGDVRDMAWMFLNCPNFNQNISEWDVKKVETMSGMF
                     WNCESFNQNIRKWNIKKVWDMSYMFKYCKLFNQDLSSWNTKRIRTYNMFSRCPIDDSN
                     KPKYI"
     gene            complement(14758..>15798)
                     /locus_tag="ACJE1S_001164"
     CDS             complement(14758..>15798)
                     /locus_tag="ACJE1S_001164"
                     /inference="COORDINATES: protein motif:HMM:NF017617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HGG0806716.1"
                     /translation="IYTTTNKIQGEKMSSTQQYEAMNEKVMVLLKKDNEKSSAVSASP
                     LIKISMEQLKNTDNGEVYKKLDELQVLIDNVSPYRNKSVFGKAGVIPKILSKAFKINH
                     LSRYIDKFENSSKLIDNIILYLNKSKEELENDNKALKLEIEGMAIKRNELKNLIEELS
                     QTQQECDEYLSINKKDEFEINRFKSDTYFPLLQKMTDVKQRVMVMEQSVIAFTTLIAN
                     NRELIVSLDRAKEVTVEALGVAILMAQSLSEQERILNSVNGLNRVTSDLIKQTSTQLK
                     NQGASIQMQASSAMLDMQALETSFKECLESFEKIKDFRIKATDDIKKHLQNFDKLMDE
                     INSKNMLINHVK"
BASE COUNT         6092 a         2037 c         2267 g         5402 t
ORIGIN      
        1 aatgaatttt aaaagagcat cagagctttt acaaattgct aataattaca atattgaagt
       61 atctgaagtg ttttcagcac ttaaacaagc tcttgaagtt gttttaaaat gcggaaaatt
      121 acatgctgat ttttcaaatg aaaaaatttc tttttatgaa attatttata accgttttgg
      181 tgagaaacgc aaaaaatttg ttcaaattaa aagaaataat tataaagcag tccaagatag
      241 atttataagt attgtaattt cttattcttt agaaaaaaag agagaacaag ttaaatcttt
      301 aaaatcgatg atttttaaag gaaagataga aaaagtctta aaatcaggtt ttgaagtttc
      361 ttcaagcata ggctttggtt ttttgccgaa agttgaaatt ttacggaaag atttagcaag
      421 aatgcaatta ggaactgaac tataccttgc tatcaaaaag tttaaaggct caaaaaaagc
      481 tcctaatggg gctttggttt ttacaaggaa aaatatgaat attttagaac atgaaatcat
      541 agataacatg agcgattgcg gcgtgtatta cattgaaaaa ataagcgcaa gaaaaatatc
      601 tatcttttgt acaaaaatgc ctacaaaaga tcaaattaaa aacacaatgc gtgcagcaaa
      661 tacttttctt gatattcaag taagaaacta atttaaaaaa ggagaaaaaa tgaacaatgt
      721 agtatttatc aataatcaag aagttgtttt tgaaaacaaa gatgaacaag ttttttgcac
      781 aagtttggat gtggctaagg tttttggaaa gaatcatttt catgttttaa gggatattga
      841 gaacattttg aataatttgc gaaaaatagg gacttctcaa gacctatcca attttggatt
      901 ggttaaatat aaagataaaa aaggcgaact tagaccagtt tatcaaatat ctcgcgatgg
      961 attctctctt ttagctatga gctttacagg caaaaaagca ttacaatgga aaatgctttt
     1021 tatcaatgct tttaatgaaa tggaaaacat tattagaagc aataatcaaa ccactaatta
     1081 ttctgattat gaatttatca aaaaacaaaa cgaaatttta aatcaaataa cttgcactca
     1141 aagcagtaca atctatgttt tgcaagatag catcagattt ttaaacaata ctattagttc
     1201 aatgaaagaa attaacaaag aactgaaaaa aattgcaggt attgatagat ttttatgaga
     1261 tagtaggaga atataatgga gaatggtagc ggtaatatag gcaataaagg cgatataaat
     1321 tcttatggtt caggtagatt tgcgcatcct aatttagatt ttggggaatt aaaggagaga
     1381 cagggcggaa gcggtagaca tatttttcat gctttaagcg aaattcaaag atatcatgtt
     1441 atcgaagatc gcagtgaaga aattccaaaa gaatatttta ccattgaaca aatcttagac
     1501 tatttgaaaa taggctttaa aagcggtatg tttgaaagct ttatttttac agggctttta
     1561 tgttttttac aagttattta tccaagttac aaatattatt ttttagattc tcctttaagt
     1621 aaaaatgaag aactattttt tgatttattg tcttacgctc ctattttagt ttctactttg
     1681 tttatggctt atatctcgaa gtactataaa ggattgctta ctcgcagggc tatttttgcc
     1741 ttaatgaatg gcagaagttt ttcatttttg cttaaaggtt ttgctatatt ttggttattt
     1801 tcatggctaa aagaaatatc aattaataat ccacgcactg tatattcttg ggcggattgg
     1861 acactatggt tgatacaata tttcaaacct aatgtcagca ctgaacaact ttatgtgttt
     1921 tactataaat atgccattcc tgctttgcat gatgctagtt atgaattgct ttattctatg
     1981 tgtatctttg ccatattgcc ttatttaaca attttttaca aaggctacaa agaaagagtt
     2041 aagcgatttg aaaataaaga tgcgtatgaa aattattaat ttaaaaagga gaaaaaatga
     2101 atttagaaaa cagtttacaa gctgaagttg tgaataatag caatattgtt ctttttgaga
     2161 atgaagagtt gggacaagtt agagtagcct tagatgaaaa taatgagcct ttgttttgct
     2221 tgagtgatat ttgtaagatt ttagatatac aagatacata taaagttaaa caagctattt
     2281 taagggagtt tgagctatcc accttaagcg tggatagctt tgatacaggt tttggtataa
     2341 aagaattcac tatgattact gagccacaac tttattttgt tttaatgaga agcgacaagc
     2401 caaatgcaaa acattttaga cattgggtaa caaaagaagt tttgcctagt attagaaaaa
     2461 aaggctttta tggtagtatt aataaaaaca atacaaccat tgattctaat atatactaca
     2521 aagaattatg tgatagatta ttaattgaga ataaagaact aaaatctgag aatattaatt
     2581 taaagcgcca tattaatgga gagctttatt tagaatttct aaataaatta aatacattct
     2641 ctaagattca ttttaaaaac agtaaaagca aagcactaga ttatatttac aaaaccatag
     2701 ctatagaatt tatgtgtcca acttatagca attttgacat aagtgattta gaatctgatc
     2761 ctagatactt aagatatgcc atagatttat gcaatgatgc aatatctaat aattttctaa
     2821 gtagaaaatt aatttaaaat aaagtgcaaa aatgtttctt aaaaaatcag aagaagaaaa
     2881 aacatttatc ggcataggtt ttgatttaga agataaaaaa caagagaagc ttttagaaat
     2941 atatcaaatc gatgataatt ctaaaaatca cacttttgta tttggctcca caggtgtagg
     3001 taaaacaaga ctcattgaag ggcttattga acaagatatt ccaaaaggga aaaatgttgt
     3061 tatcattgat cctaaaggtg atatagggct gttttcaaaa atggttgaaa tcgctaaaaa
     3121 aagtaataga gaaaaagaac ttatgttttt aagtcctatt tatcctgaat attcgatcaa
     3181 aattaatcca ttagcaaatt actacatgga agaagaaatc attgctcata ttgtttcagg
     3241 tgttcctgca aaagatgagt tcttttataa tgttgcaaat gaaacaacca cagctgttgt
     3301 aaaagctttg cttattatta ggcgttatga aaagctagaa aaacctttaa attttgaaga
     3361 aattgctgaa aaagtttatt atgaaggttt aaaagagctt caatcagaat taaaagaaat
     3421 acaaagtaat ggttttgaag atgatgagat tgctagattg cttgctctat acgatagggt
     3481 tttatcatca ccacaagatt attttgccaa agtttcatca actcttagaa ccacgcttac
     3541 tcaaatgacc atgggtaatg taggaaaaat tataggtacc gcacaagaaa acacttttat
     3601 taaaagatta caagaaaatc aaggcgtgct tttatatatt atgacaggtt ctatgcttac
     3661 aaggcaagtg tcaagtatta tttccaaagt aaccatttct atgattcaat cttgcgtggg
     3721 cagggtttat gcctcaggaa aaaaatttga taaaacatta aaaatttaca ttgatgaagc
     3781 tgcttcttct gtgtatagag gtatagaaac tttatatgcc caagcaaggg gtgcaggagt
     3841 agctattatg gggttaactc aatcagcagc tgacttagcg gctgaaatag gacaagatgg
     3901 ggcaaacaga ttattagaac tcactaacac taaaataatt atgcgcttaa atgatacaaa
     3961 aagctctaaa atgatttcag atctaggggg taaaaaaaga gcttattctt attttttaac
     4021 cgtagaagga ggaattactt caagagaggt tgaagaatta aatattgagg ttgatgatgt
     4081 gactaaccta caaaaaagag aattttttta ttttggtttt gaagggcgtt ttaaaggaaa
     4141 gactttaaaa gtgaatgatg gaaaattagt tgtggatatg cctaatgtaa ctcaaaaaaa
     4201 cgaggatttt aatgtttgat ttaattgaaa atgtgatgag ttttatttat cgccatcaac
     4261 tcattagaaa ggttgtttgg caaattataa tcactttcgt atctattttt ctttttttaa
     4321 cctttttatt ttgggtaaat ttagaaaaaa tgggatactc aagttttaat tttagtctat
     4381 tattaaattt acaagcctat atatttttac tttgggagta ttcaagagaa atagcttgtt
     4441 ttctaatcat agaacaagct ttctttattc tattgttatg gtatatgaac aataaactca
     4501 aaaatccatc aaatgataaa gaagtagcac atatacatat taaagagctt gcaaaaattt
     4561 ggcttgaaga tgacaatact cctatgatcg atacttccag acaagccact gaaaaagcta
     4621 atattatcat ggtaaataag caagtgcgtg attctattat ttctttagct aatttaaaac
     4681 aagacataag tcaaatcttt ttaaatgata ttattaaacc taatctcgaa aagatccatc
     4741 caaagcacct tgaaatgatt attaaattac ttcaattgct cgaagaaaat attgcttgtc
     4801 caagtgttgt gcaacttttt gaaggagatc ctaatagcgc ttatggaaaa atatctgcta
     4861 gaagaaaaga tggagaaagg gttgatacag ttactcttga tggaaaaact cgctttgata
     4921 tatatgaaaa aattagtctt ttaagacatt ctttaaatgt agcttacaag attattgagt
     4981 tgctaaacga aagtaaagaa tacaagtctt ttaaaaaaac attgtttggt aaagcaatta
     5041 ttgtagcctt aggacatgat ataggcaaga ttaataattt tacactaaga gaaagctata
     5101 tcaaagaaca aagattaaaa ggtgattcaa aacaagcttt tatgaattta aaaagaatgc
     5161 aagaacatca aaaaatttcc tatatcatct tttacgaact ctttaaaaac tatcctgatt
     5221 taaaagaact tgctaccgtt gttcaagggc atcacttagg tagtattgat aaagatgata
     5281 aacttttgaa attattaatt gatgcggaca aacaaacaag agattatgaa ttagatgctt
     5341 atttgcaaaa tagcgaagag tttgagaaaa taagaaataa agaattagaa agtattatta
     5401 caacagttcc gcaaaaaaat aatctagcgc atgaaaacac ccaaaaaaca atttctaaaa
     5461 caccagaaaa gaaaactcaa accattcaaa acaaaacaca aaatgaaagc actgaaaatg
     5521 aaatttcaat tttagattta aaagaacttc aagatcgatt tgttcttaat ttcaatgaat
     5581 ttaaaaagca atttttcctt tttgtagccg aagataattc aaaagaattc caagaacttg
     5641 tttatacatt cgctttcaaa aatacagaaa aagaatttta taaaaacaaa aaagatttat
     5701 ttatacttgt tgaatgcggc gtgattaatg gaaacagaac cgataccatg aattattttt
     5761 atgatttgag cgatgagatt aataaaaaat taaataagaa gattaaaata ggatttgcta
     5821 tgtttagaga ttgcaaagac ataaatgaag ctattgatgg ttgcaagaaa gcattagaat
     5881 acgccaaaaa taataatcag gttgtttatt atgattataa agatttaaaa atatcaaata
     5941 gtgataaaat attaatttca gataacgcag aagttaagat aactgagagt gtaaaaatcc
     6001 aagaaaaaac agatacaatc actacaaata atcaagttaa tacattagaa gagattgata
     6061 cattaaaaca aaagactatt gatactcaaa tcatagaaaa tatgtttgaa atgattgaaa
     6121 gcaaggttca agaagttgaa tattctttaa gtcaagaaga aaattttgac attccgctaa
     6181 ttgaagcaaa atttattgaa attataaagt ccaaaattaa cacttttaag cgtaaaggtt
     6241 ttgctaagat tccgcaagct ataagcttta aaagatttgt gttattcagc cacgaatgtc
     6301 ttttagaaag tcttgctaaa gcacttaatg ttaaaaatga aaatttgaac gccaaactta
     6361 attttttaat tcgttattat agaaatcatc ctgatgaaaa caaaagattg atttggtttg
     6421 ttaatgtgga aaaaggcttt tactattcaa cttatatttt aaaatttgat gaaagacaag
     6481 atgaagtttt cttttgtgtt ccttttgatg gtaaaagagc ttttggaatg agtatttcag
     6541 agcttagcat tcataaggat aatagcggat taagaaattg tattgttaag ccttatgtaa
     6601 aaaaggagga aaaatgaaaa aaagaagagc tgatttactt aaaaaacaca attcaaaaat
     6661 cgtgcttgcg gatacattgg aatctgaagc tatggttgat ttagcaatga aagccaatga
     6721 tattttttta aaacttaaaa aaactgcagg cgtgggtttg gattttaaag atgcagatga
     6781 aatgctaatg ttgtggaatt tagtattagt caaaagctca caaactcttg aacaaatttc
     6841 gcagaaaata gacatgaagt atgatgaacc ctttacaata actttagctc gtgagaaatt
     6901 agaaaaatga aagcaatctt ttttttaacc tccttacttt ttgctaattt actctttgct
     6961 caaaaaaatt attttataca ggcaggagag aaattcggaa tcaatccgca attgctttgg
     7021 accattgctt ataaagaaag tcgcttaacc cccaatatta ttagcaaacc aaataaaaat
     7081 ggtacttatg atataggcat tatgcaaatt aatagcattc atttaccaag attaaaaaaa
     7141 caatatggta ttaatgaaaa tgatttatta agacctaaaa ttaatatttt tgtaggagct
     7201 gaaatattaa aaatgtgttt agacaaacac ggattaaatg aagaaggtat tacttgctac
     7261 aatggaagaa ttatcaacaa tccctacgga aaagaagtaa ttaaattact caaaaaagca
     7321 agaataacaa atggaaaaat taattaaatt tcaaaaggag acataatgaa taatttatta
     7381 gaaaaaaata tcaatgaggt taatgaaatg ctcattaaaa gtttggatga tttgccacca
     7441 ctgcctgaaa ctattcaaaa attgcaagaa tatattgcca cacatggaag caatattgtt
     7501 attgatgaaa tagcaaatat tattagcaca gatcctttaa ttacagctaa tttattgcat
     7561 ttaaccaatt cagcttatta tggtttttca aaagaaatta aaactgttaa tcaagcctta
     7621 gttcttttgg gggtaagcaa tgttaaaaat atgattattg ctgattatgc aaaaagttct
     7681 tttgtaatca atctaagtcc ttatggtata gaaactgatc gctttttagc tttaattcat
     7741 gagcaaacca attttatttc tacttggcta atggaagaag ataaaatgtt gtgccataat
     7801 ctaattccat gtgttatgat gctaagatta ggcatcatgg tattttcaaa ttttttaatt
     7861 caaaacaaca tagataaaaa atttttattg catttaagca agaataattt taataatata
     7921 ttaagactag aaagagaatt cttaggagtt gatcatatat cttttttatc aaacttattt
     7981 aaagtttgga atttagatga agatcttatt gaaattataa actctcttga ttatcttggt
     8041 tctactagcg caaaagtaaa aaaagaaaca tacgctttag ctgccattga agcccttttt
     8101 agccctgaaa aaaacgctta tgatgaattt tgtgtacaaa aagcctatca aattttaaag
     8161 gatgctaagg caaatggagt tgattttaat ttagaaaatt ttttaaataa attgcctgaa
     8221 aaatttatag aaattttaag caaaagcaag gaacaattat gaatatagtt gatcttgtga
     8281 aaacaataga aaatattgaa aatccacaaa atcttaaaat tacaagagaa ggcgcttgct
     8341 tttacatgtg tttaggtgaa aataaaaaat atttttattt ttttaaagct aattctaaaa
     8401 ataaagaaag tcttccttat acactcacat tggatgattt aaaatctgat gaatggaaaa
     8461 ttttaaagga ttaaaatgaa tacaatacaa aaactcagaa gagaactaaa aatctataca
     8521 gcaggaataa ttgtattgcc tatattatca attgtaagct atatatttaa taatcagaaa
     8581 ctagattata attttttgat attttttgcc ttatattttg ggcttttttt tggtttttgt
     8641 gtaataggtt tttttagcac caaaaaagca attaaaacat attcgcaatt aatagaaaaa
     8701 tctcaagaag aatttggaga aaaaaatgaa aatcatagga tttaatttag gtattgctaa
     8761 tatcggttgg gcattaagag aaaatgatga aatcatagat tgcggagtaa gagtgtttga
     8821 tatacctgaa aatccaaaaa atggtaattc attagccctt gaacgccgag aaaacaaagc
     8881 tcgtatgaaa atagtcaaaa gaaaaaaagc aagaatgctt gcaactaaaa cttttttaaa
     8941 aaaagagctt aatgttgatt tatccaaact ttttttaatc ggatcaactc aatctatcta
     9001 cgaattaaga accaaagctt taagttcttt aatcagcaaa gaagagttat ctgctattat
     9061 tttacacatt gctaaacata gaggatatga tgatagtgca ttgaaaaatg aaaatggaac
     9121 tatcattgaa gccctaaata aaaacaaaga aacaatgctt aaatttaaaa gtgtaggtga
     9181 atatttttat aaaaattttg ttcaaaacaa agaagttaaa aaaataagaa ataccacaga
     9241 agattatttt aattctgttc caagaagttt attaaagcaa gaacttgatc ttattcttga
     9301 taaacaaaaa gaattaggat taattaaaaa tgctgatttt aaagaaaaac tatttgaaat
     9361 catctttttt aaacgccctt tgaaagattt ttcaaataaa ataggaaatt gtattttctt
     9421 tgaaaacgaa aaaagagctg ctaaaaatac cataagcgct tgtgagtttg ttgctttggg
     9481 aaaagttgta aaccttttaa aaagcattga aaaagatata ggtatagttt atgaaaaaga
     9541 tagcattaat gagattatga gcattatttt agataaaaca agcattagtt ataaaaaaat
     9601 cagagatatt ttaaatcttc cacaagacat aaactttaaa ggcttagatt attcaaaaaa
     9661 taatgctgaa aactccaaac ttgtagattt gaaaaaactt aatgaattta aaaaagcttt
     9721 aggcgatggt tttgctaatt tagataaaga tatacttgat agtattgcta cagatatcac
     9781 tttaaccaaa gacacagcaa ctttaaaaga aaagctaaaa aattataatg ttttaaatgc
     9841 agaacaaatc gaaaaactct cagaacttgt ttttaatgat catattaatt tatctttaaa
     9901 ggctttaaaa caaatcatac ctttaatgta tgaaggtaaa agatacgatg aagcttgtga
     9961 gctttgcaat tttacaattg ctaaaaatca agaaaaaagc gaatatttgc ctttatttga
    10021 aaaaacacgc tttgctaagg atatttcttc tcctgtggtt attagagcta tttgtgagtt
    10081 tagaaaattg cttaatgata ttataagaag atacggcagt gttcataaaa ttcatttaga
    10141 actaacaaga gattttggga taagttttaa tgatagaaaa aaaataatca aagaaattga
    10201 acaaaacgaa caaagtcgta taaaagcttt agaaacaata aaagaattaa aactagaaga
    10261 aacttctaaa aacatacaaa tagttagatt atttgaagat caaaaaggaa tatgtcctta
    10321 ttcaggctta aaaatggatt taaagtgcct tgatgaatta gtaattgatt atatacgccc
    10381 ttataataga agtcttgatg atagttatag caataaggtt ttaactttta aaaaactaaa
    10441 cgatttaaaa caaggaaaaa caccttttga agcttttgga gaagatgaaa aactttgggc
    10501 tgaaatcaat gagagaatta aagaatataa tggcaaaaaa agatttaaaa tttttgacaa
    10561 attctttaag gataaaaagc cttttgattt tacagaacaa accttacaag atacaagatg
    10621 gctaactaaa cttgttgcga gctatcttaa cgagtatctt tcatttttgc ctatcagtga
    10681 agatgaaaac acagccttag gctatggaga aaaaggaagt aaacagcatg ttattttaag
    10741 ctcaggaatg attactcaaa tgctaagaaa tttttggtat ttaggcttta aaaatcacaa
    10801 agattacaaa aacaatgcta tggatgccat tatagtagct tttacaacca attctattat
    10861 ttttactttt aataatttta aaaaagaatt agatttagca aaagctgaat tttacgcaaa
    10921 caaaatatct gaaagtgatt atttgttaaa aagaaagttt ttaccacctt ttagtggttt
    10981 taaagagcaa gcacttgaaa aagtaaaaaa tatttttgtt tcgcattctt taaaaattaa
    11041 aaataaaggc actttgcatg agctaacgcc acttaaaata aaagaactta aaaatacata
    11101 tggtgattta gatcttgcgg taaaattagg taaaataaga aaatataatg ataaatatta
    11161 tgcgaatgct aatggttctt tagtgagatc tgatttattt atagataaaa aaaacaaatt
    11221 ccatgcagtg cctatttata aagcagattt ttctacaaaa aaacttccaa ataaaacccc
    11281 tgcaactaca tcaaatggag aaaccaaaga aggcattgaa atgaatgaaa attataactt
    11341 ttgtatgtca ttgtataaaa atactccaat tagcgtaaaa ataaagggta tgaaagagtc
    11401 tattatttgt tattatcatg gttttaatac ttcaggaagt aaaataacct ataaaaaaca
    11461 cgacaacaat tatcacaacc ttagtgaaga tgaaatggtt gtttttagaa aaaatgataa
    11521 agaatctata gcggtaggaa aaatacttga aattaaaaaa tacagtataa gtccttcagg
    11581 tgaattaagt ttaattgaaa acgaaaagcg caaatggttt tagatatttt tgctcaaaaa
    11641 ataagaaaaa acattgataa aataggcttt tgagataagt ctattttacc atataaacaa
    11701 ttaataatag gctaaaacac aatgaagaaa tgaattctat tttattaaat tttaccatat
    11761 aaacaattaa taataggcta aaaccctaac ccttaaatag aaaagtcttc ttctatttta
    11821 ccatataaac aattaataat aggctaaaac ataataatat tgtgatatta aaaattattc
    11881 attttaccat ataaacaatt aacaataggc taaaaccaaa ctctttaact tcttaaaaca
    11941 gtccatattt tatcatataa acaattaaca ataggctaaa aatagctttt aaatatttaa
    12001 attcataaga aaatatttct taatctactt tcatcgcaac ttttcaaaaa atcatagatt
    12061 ttctttctat aagttgattt atcctttttc caagtattta gcgttggcaa tggaattgtt
    12121 gtaattttgg caattttaga atcacttaaa cctgtattag aagaattaat agaatttgaa
    12181 aatatttctt ttaattcttc ttgattagtg ttttttaaaa aaagatatat ttttcccctc
    12241 caattgtctt ttttttgttt ccagtctcta atagtgaaat aagggatatt agtaatttgt
    12301 gaaatttgga catcattgtt catcaggctt gaaaccacta tctaaaatta tttttgtcat
    12361 tacaccctta agtttatcaa aatgatttaa agcttgcaca ttgctaactc taagcaatct
    12421 tattttccca tcttttttat aaaacacctg aaaaacttca tcgctttgtt tgcattttac
    12481 catgtcatct gaagtaggac tatctatgaa ttcatatttt tcaataaaat cttcatttga
    12541 aatatcaaat aaatcttttc tatagccact tggcgaattt ggatcataag aataaacatt
    12601 agtcaatgat tcctctgtag ccttttgtag ttcttctttt gaaattttgt tcatcttaac
    12661 tcctaataat ttttgtaaaa ttatacaaca atataagatt atacaatagt ataacacaaa
    12721 taaaaattgt ataaaagcta aaatctaatg aatgtatatt cggaaaaata ttacagaaaa
    12781 aaaccagcac aacagaacaa agaaaagaaa tttgcaaagg tatgagaaaa ataacagtca
    12841 acttcttttt tttatcagca agcaatttta ttaattgatt gtgttcggct ttaatctttg
    12901 catctaataa aaaacccata aataatatca tatgtaaaat cataaaaatt ctaacaaaaa
    12961 aaataaaaaa agcttgaatt tctgtgtaga gaaatatttt taaaatatta gtccaaacat
    13021 tttcatatac gattaaaaaa ctaaataata ttgacataaa agccccataa gcttctatta
    13081 ttttcaattc tttatttctc atacaaactt tcctttttta atacaagtaa atcttccatg
    13141 gtgttatcta tgattagaat tttataatct tgttcttctt tattttttat atctatcttc
    13201 ttatttactc ttttatttga tttaattttc tttattaatt ccaatacaac agcaaaaacc
    13261 atcatgatag caaatattac taaaacatat ttaccaacat tccaaatcca ttccataatt
    13321 ggataagata gattaatagt gtttccttct tcaattatca tgcccactac agtcaataat
    13381 gatgctaata acataaaaat tgcgcctaat ggcggattaa aaaacagcac tattacgctt
    13441 atccaaagac caataaaacc taaaatttta aaaatcaata caatcatatt attgtactcc
    13501 attttttata ctgttgtcta gtgaattttc aatatgatct agtttgatat ctttttcaat
    13561 gttaatttct tttttaaaat ctaaattttt aagtttatca aacaactttt gagcttgttg
    13621 aaccaatcgc tcctcatttc tttccaaatc tgaggtatgt agtttatttt taattaaaaa
    13681 atattctttg caattctgat taagaattaa aattatgcta tttaattctt tttcaatata
    13741 acctttgcta atgtttccta aattgattgt atccatataa actataatat caataagttt
    13801 ttctttaata tctttatata tggctcttaa tttattattt tcaatgctat ttaatttatc
    13861 gctattcatg tataatttca tttttactcc tttgtattta tatatattta ggtttatttg
    13921 agtcatctat agggcatcta ctaaacatat tataggtgcg tatccttttt gtattccatg
    13981 agcttaaatc ctgattgaat aatttacaat atttaaacat ataactcata tcccaaacct
    14041 tttttatatt ccatttgcgt atattttggt taaaactttc acaattccaa aacattccac
    14101 tcatagtttc aactttttta acatcccact cagatatatt ttgattgaag tttggacaat
    14161 tcaaaaacat ccaagccata tctctaacat cacctacatc ccaagctcca atatcttcat
    14221 taaaaaattt attacattca aacatactac gcatggtttt tactttacct gtattccatt
    14281 tttcaatacc tgaaaaattg gtacgagtgg atccagtaaa taaataactc atatcggtga
    14341 tctcgcttgt atcaatatca cctagataaa tactttcatc tttaactaga gccttaagct
    14401 cttctttggt tttaggcgtg tatttgtatt tttttatgat ttttacttct tcaacaataa
    14461 aactttccct ttttaatgca agtaaatctt ccatagtatt atctataatt agaatttttg
    14521 gattttgaga aactactgtg ataaccttat cttttttaaa tttctctacc attaatgttt
    14581 ttaatccgaa tgtaatagat tctttccaat attttttaca aaaatcaaaa cttgttataa
    14641 aactccaaaa gataaatagt gtttgaatag agatgataaa aataaaaaaa taaagcccta
    14701 tcttttcaaa agaaagagca agttcattgc ttaattcaaa cataattctt tccgttttta
    14761 tttaacatga ttgattaaca tatttttaga attaatttca tccattaatt tgtcaaaatt
    14821 ttgcaagtgc tttttaatat catctgtagc cttaattcta aagtctttaa tcttctcaaa
    14881 actttccaaa cattctttaa aagaagtttc taaagcttgc atatcaagca ttgctgatga
    14941 ggcttgcatt tgaatacttg caccttgatt tttaagttgt gtagaagttt gtttaatcaa
    15001 atcagaagtt actctattta aaccatttac gctatttaat attctttctt gttctgacaa
    15061 tgattgagcc atcaagatag caacccccaa ggcttcaact gtaacttctt tagccctatc
    15121 caaagaaacg ataagttctc tattatttgc aataagagtt gtaaatgcaa tcactgattg
    15181 ttccattacc attactcttt gctttacatc agtcattttc tgcaataaag gaaaataggt
    15241 atcactttta aatctattta tttcaaattc atctttttta ttaatagaca aatattcatc
    15301 gcattcttgt tgtgtttgag ataattcttc aattaaattt ttaagctcat tgcgtttaat
    15361 tgccatgcct tcaatttcta attttagtgc cttattgtca ttttcaagct cttctttgct
    15421 tttatttaaa taaagaataa tattatcaat taacttagat gaattttcga atttatcaat
    15481 atatctcgaa agatggttga ttttaaaagc tttggataaa atttttggga taacccctgc
    15541 tttgccaaaa acagatttat tcctatatgg gcttacattg tcaattaaaa cttgaagctc
    15601 atcaagcttt ttatagactt ctccattatc tgtgttttta agttgttcca tagaaatttt
    15661 aattaacgga cttgcagata cagcagagct tttttcgtta tcttttttta acaataccat
    15721 cactttttca ttcattgctt catattgctg agttgaactc attttctctc cttgaatttt
    15781 gtttgttgta gtgtatat
//
LOCUS       DBBXOW010000038        15510 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.039, whole genome shotgun sequence.
ACCESSION   DBBXOW010000038 DBBXOW010000000
VERSION     DBBXOW010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15510
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.039"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(83..1174)
                     /gene="aroC"
                     /locus_tag="ACJE1S_001165"
     CDS             complement(83..1174)
                     /gene="aroC"
                     /locus_tag="ACJE1S_001165"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HGG0806717.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCVIDGMPAGVKFDEEFLQSELD
                     KRKGGSKFATPRKEGDRVQVLSGVFEGYTTGHPIAMVVFNENTHSKDYDNLKDLFRPA
                     HADFTYFHKYGIRDHRGGGRASARESVARVAAGAVAAMLLREFGICVRSGVFGVGNFI
                     SNLKEEELDFEFAKQSEIFCLDPNLEDEFKKEILSARNSKDSVGASVYTRAKGMLVGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSQNNDALKGGEFLSNHSGGI
                     LGGISNGQDLILKTYFKPTPSIFLKQSSMDKFGNDLEFELKGRHDPCVGVRGSVVVSA
                     MVRLVLADCLLLHASANLNNLKNAYGIKK"
     gene            complement(1174..1848)
                     /gene="rnc"
                     /locus_tag="ACJE1S_001166"
     CDS             complement(1174..1848)
                     /gene="rnc"
                     /locus_tag="ACJE1S_001166"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HGG0806718.1"
                     /translation="MKNIELLEQKLAYKFKDKDLLIHALTHKSFKKPYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSAAEENN
                     GGKEKPSILSDALEAIMGAIHLEAGFDFARNIALKLIEKNFPQIDAKNLIKDYKTKLQ
                     EITQAKLGQTPQYETVRAFGPDHLKQFEIALFLNGQELARAIAGNKKEAQQMAAKITL
                     EKLGAL"
     gene            complement(1835..2275)
                     /gene="rnhA"
                     /locus_tag="ACJE1S_001167"
     CDS             complement(1835..2275)
                     /gene="rnhA"
                     /locus_tag="ACJE1S_001167"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HGG0806719.1"
                     /translation="MRHIEIYTDGSCLKNPGFGGWAYILRYNQHQKEGFGAEANTTNN
                     RMELKAIIEALKALKEPCEISLFTDSNLMVQSINEWLEAWIKKDFKGKKNVDLWKEYI
                     DVAKPHKIKAYWIKAHNGHLENERCDTLAREAALKIARENDEKY"
     gene            complement(2262..3245)
                     /locus_tag="ACJE1S_001168"
     CDS             complement(2262..3245)
                     /locus_tag="ACJE1S_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDC27 family protein"
                     /protein_id="HGG0806720.1"
                     /translation="MDFFFVEYRDPLVGLIILTVLIFVVAVANYIWKVFASKDEEQKL
                     EKFIKKFEMDNIHKDLLRNEGLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKSKDKQ
                     EREFIFFALAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRKYKENLE
                     LLGCLFELGENVKEEKEFLKALDFLASSLSDEEKKEHILKLQTDNNPMLGRFVFEKYH
                     IFLNQDFSSICDLLYKENKAFNLQNKEYFEFFYALGLIEDEESKDVNFKNSNFKMLKI
                     LKENSFKARLEFSYRCTECKSVMPLFFYHCPVCYEFNTCQIIYEVKNNETY"
     gene            3315..5141
                     /gene="dnaG"
                     /locus_tag="ACJE1S_001169"
     CDS             3315..5141
                     /gene="dnaG"
                     /locus_tag="ACJE1S_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HGG0806721.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCVCPFHADKN
                     PSMHINPTKGFYHCFACKAGGDAFKFVMDYEKLSFTDAVEKIANLCNFTLSYTKEKNE
                     NKKELRTILPSLNAYFKSNLKHHKEALDYLYKRTLNDQDIAKFELGFAGSSEDSIRLF
                     HNEKILLEDAMSVGALKKDKNNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVAAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEMIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTENHLPLIHRYEAKVILCFDNDEAGLNAATRSAFLLSTHKIDGKVALLEGGKDPAE
                     LVANNQSAKLHTLLEKGMDLGEFYIRRILSSFSLNSALDKQKALENIQKYTFSLEPLV
                     ASSYVGLVSKLLGVDEKLIVLTSNRKPSKTINFNTSFQQTQNHNPKSHITELELLNYL
                     KNNPNMHELFIKISDIRCFKHKVLLEKILEHKSYEDSDIREFESKNFSKDLSQIEFLW
                     GICKVNLAFLNHINITNSYLALKKQIFTLIEKNFVLLSKNLNDHELVEFLKENLFLLK
                     NEKDEEKLEALFKNLHRFFSAKNLDIKILKNNSENDYNEEPF"
     gene            5236..5508
                     /locus_tag="ACJE1S_001170"
     CDS             5236..5508
                     /locus_tag="ACJE1S_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HGG0806722.1"
                     /translation="MMPFSDEELINPVKASLDKSMPMLERDGGGLEFLGIKNGVVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIVNLNGGAEDFAKL"
     gene            5495..6052
                     /locus_tag="ACJE1S_001171"
     CDS             5495..6052
                     /locus_tag="ACJE1S_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HGG0806723.1"
                     /translation="MQNYKKLGIEHFLRKDFKTAKIYFSLAYEKRKNKRLFHFITLCD
                     LALKSPKEALLLFEFYLEHYQIKNIDKDLEEILSTIELKNEKNTDETENEIQEAHTLN
                     YKDFLKSEEQIGFKKSFENIIHSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIESVM
                     PHFWANERFIKLQEKLIGFKSEIKA"
     gene            6036..7319
                     /locus_tag="ACJE1S_001172"
     CDS             6036..7319
                     /locus_tag="ACJE1S_001172"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HGG0806724.1"
                     /translation="MKLKLDQSFITDNTLECEKDCYFLKTAQNMNFASDALEKGAKII
                     DVEECKKLLKIDENIKIIGITGTNGKTTTAAAIYSILLDLGFKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQLATQKKCDFFIMEVSSHALVQNRIEGLKFAAKIFTNITQ
                     DHLDFHGNFENYKAAKELFFTDESLKFINKDTLMIKFNVRNAFTYGIENPSLYQVKAY
                     SLEDGISAIVALKDQSFHIDSPLLGLFNLYNLLAASACVNELVKPNLKDLEKAISGFG
                     GVCGRVEQVANGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKDIMNEILSGFQNPDKALMIEDRKEAINKALKLKEKDDL
                     VVILGKGDENTQEIKGIKHPFSDKAIVNEILKNQG"
     gene            7323..7628
                     /locus_tag="ACJE1S_001173"
     CDS             7323..7628
                     /locus_tag="ACJE1S_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HGG0806725.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDGSLLEDKESLQILLISAINDVLAMVAQNRSSLASDVLGGFGKL"
     gene            7625..8716
                     /locus_tag="ACJE1S_001174"
     CDS             7625..8716
                     /locus_tag="ACJE1S_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HGG0806726.1"
                     /translation="MKFLFFLVTFLISLSAIERPKFEDFAAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNVKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWIGI
                     WDPNRAYIGHIKYLAQNIDEKDQLDFSTKVGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFAVRENKIYVNNVRKSGQFLINDEIISVDGTLVKDIRKLNEKI
                     LFADRGSTLYFQVLRDNVDLNISTEVFAKDLSKFNLPSNKPKPKPTNFRSNIGLSVNS
                     SLIVTKVDAGSKAALAGFMVGDKILRANNVTLKDFKELQTLLGTGNDFNILIERKSDK
                     LPLLGLNNDLGGVHSGGDGKFQFFIRLVK"
     gene            8713..9552
                     /locus_tag="ACJE1S_001175"
     CDS             8713..9552
                     /locus_tag="ACJE1S_001175"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HGG0806727.1"
                     /translation="MKELFIKHLENHLPKVQSFHPFFNEALAKMLKAGGKHFRAQLLL
                     GVVQNKAPHLIPNALNAALALEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTA
                     ILVGDALNTEAFLLLSNLNLKESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNL
                     EELEFLHTHKTAKLIAAALKMGCEICELDEKESEKIYQIGLKLGLIFQINDDIIDETM
                     SEEESGKPSKHDEHKNSFVNLLGLEKAIQSKENLINECKNDLGDLDANLAHMIKSLMI
                     KYL"
     gene            9562..11460
                     /gene="tkt"
                     /locus_tag="ACJE1S_001176"
     CDS             9562..11460
                     /gene="tkt"
                     /locus_tag="ACJE1S_001176"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HGG0806728.1"
                     /translation="MDLSILQEQANTLRFLSADMVQKANSGHPGAPLGMADILTVLSY
                     HLSHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLDDIKNFRQLHSKTPGHP
                     EISTQGVEIATGPLGQGIANAVGFAMAAKKAQNLLGKELINHKVYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNLIIIYDSNEISIEGDVSLAFNEDVKMRFESQGFEVLSIDGHDYE
                     AIDKALKQAKKANKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEKAGFDP
                     NLNFYIPKAAKIRFESAVELGDLEEAKWKDKLEKSEKKELLEKLLNPDFSKINYPDFK
                     GKDLATRDSNGEILNALAKDLEGFLGGSADLAPSNKTELYGMGDFAEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKVKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKDAKFTLLASGSEVSLCLESANELEKQGFACNIISMPCFELFE
                     KQDKAYKDRLLQGEVIGVEAAHSNELYKFCDRVYGIESFGESGKDKDVFEHFGFSVPQ
                     ILNFILDK"
     gene            11462..12577
                     /locus_tag="ACJE1S_001177"
     CDS             11462..12577
                     /locus_tag="ACJE1S_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806729.1"
                     /translation="MEANFKFQKEENKVFIFGIWDKTSVSKIKIKDLLSQISQTNCIF
                     DFSQLNEIDMAGVRFFLALEHDLKKNDILILKQGLNTRFKSLFELCEKNYQRINEKQE
                     KKFNFTDFFISLGILSFDLLKILQKFINFTGAFFTSLFLCIKNPKNFRFISFLYHIEN
                     SAFKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLVGISATRELAPLIAAIVI
                     AGRSASSYTAQIGVMKITDEINAMNTMGFRSFEFIIIPRVMALVIAMPLIVALSDAIS
                     ILGGMVVAKINLDISFGEFLRRFREAVEMKHIIIGLAKAPIFGFLIGLIACFRGFEVK
                     NTTQSIGIYTTKSVVNAIFWVIAFDALFSVVLTIMEV"
     gene            12578..13300
                     /locus_tag="ACJE1S_001178"
     CDS             12578..13300
                     /locus_tag="ACJE1S_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806730.1"
                     /translation="MIIKAQNIITRFGNKVVHDGVSFEINKNEIFGILGGSGNGKSVL
                     LKQMLMLEHFDEGEYEILGFKLKNISEEDALELRKKWGVVFQFSALFSFFSVYENIAI
                     PLKEYTNLDSIAIKELVLMKLKMVGLNEAVLKQLPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLILELKQSFDLNIVLVTHDKESMKNLLERFIILEDKKV
                     AFCGNYEELRAQNERLFKRFME"
     gene            13303..14199
                     /locus_tag="ACJE1S_001179"
     CDS             13303..14199
                     /locus_tag="ACJE1S_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HGG0806731.1"
                     /translation="MENKANYFFVGLFVFGVFFASIGFMLWLGRYSKEESFEYYEIHT
                     QESVAGLGIKAPVRLLGVEIGNVENISIYDKENLGVNILIKIKKGTPIKEDTFATLQF
                     QGITGLKFVQLQGGSKNSPKLQVKGKEEFPVIQFKEGFFAAIDRQSEHIFSLIKRADD
                     KSKELFSDKNIKNLEILLDNLAQLSTTLNKDSKTLNHNIANTSLKLGEMAENVSLSAK
                     GFNASLKDIQEGALALSSFAKKANVKLDSYDDLRLSLAENLELLKKVLIESNILIQNL
                     QKSPSDLIFKETKPKLGPGEKQ"
     gene            14196..14798
                     /locus_tag="ACJE1S_001180"
     CDS             14196..14798
                     /locus_tag="ACJE1S_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HGG0806732.1"
                     /translation="MKKFIYITILAFIFNGCSIPTSTLDKTQSFILKNDELPLQANFI
                     KSDKILKIQNASLPLYLHSRSIIYVQKGISKAYAYHFWADLPNNLYQSLLLSKFEQSQ
                     IFKALLSQGSSVGSDYILESRIDSFEQVVDENENYVSISISINFIDAKESKIIAHRLF
                     SIKERVKKIDIFDVYQSFEKALNSLGNEIVLWINATLDEK"
     gene            14850..15350
                     /locus_tag="ACJE1S_001181"
     CDS             14850..15350
                     /locus_tag="ACJE1S_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FLiS export co-chaperone"
                     /protein_id="HGG0806733.1"
                     /translation="MKNELDVFKKHLGEIQGVSEFKATQICSQINDANDFIGALQILD
                     LTLKKIEKSITERLDEQNDDLQKRTLDATSSQLIQNCSFMGTALFGNIFNVYVGQKLF
                     EFEISNPLLVLEKAGYEGVLAYIQDKRDEIKDILCKLSSAITMGISMDNMNFSDSATN
                     FKNLFR"
BASE COUNT         5515 a         2385 c         2549 g         5061 t
ORIGIN      
        1 gtgttaaaaa atttataaaa gagacgatat ggagttaaat cttttcaaaa tattgcaaat
       61 taaagcccaa aaatgggctt tatcattttt ttatcccata agcatttttt aaattgttta
      121 aattagcact tgcatgaagc aataaacaat cagccaaaac caaacgcacc atagcactta
      181 ctactacact acctctaaca cctacacaag gatcatgtct gcctttgagt tcaaattcta
      241 aatcatttcc aaatttatcc atactgcttt gctttaaaaa aatagaagga gtaggtttaa
      301 aataagtctt taaaataaga tcttgtccat ttgaaatacc tcctaaaatc cctccgctgt
      361 gattacttaa aaattcaccc ccttttaaag catcattatt ttgcgagcct cgcattttac
      421 tcgcattaat cccctcgcct atctcaacag cttttacagc attaatcccc attaaggcat
      481 gagctaattt agaatctaat ttatcataaa gcacttctcc aagtcctaca agcattccct
      541 tagctctagt ataaacagaa gcacccacac tatcttttga gtttctagcg cttaaaattt
      601 cttttttaaa ttcatcttct aaattaggat ctaagcaaaa aatctcactt tgttttgcaa
      661 attcaaaatc caattcttcc tcttttaaat ttgaaataaa atttcctact ccaaaaaccc
      721 cacttcgaac acaaatacca aattcacgca aaagcatagc tgcaacagca cccgcagcca
      781 ctctagcaac actttctcta gcactagctc ttccgcctcc tctgtgatct cttatgccgt
      841 atttatgaaa ataagtaaaa tcagcatggg caggacgaaa taaatctttt aaattatcat
      901 aatccttaga atgtgtgttt tcgttaaaca caaccatagc aataggatga cccgtggtat
      961 aaccttcaaa taccccgctt aaaacctgca ccctatcgcc ttcttttctt ggagttgcaa
     1021 atttgctccc acccttgcgt ttatcaagtt cgctttgtaa aaactcttca tcaaatttaa
     1081 cccctgcagg cattccatca atcacgcaac ccactgccac tccgtgggat tctccaaaac
     1141 ttgtaaattt taatcttgtg ccaaaagtat tcactataaa gctcctaatt tttcaagtgt
     1201 aatttttgct gccatttgct gtgcttcttt tttatttccc gcaatggctc ttgcaagctc
     1261 ttgtccatta aggaataaag cgatttcaaa ttgttttaaa tgatcaggtc caaaagcacg
     1321 cacggtttcg tattgtgggg tttgtcctaa ttttgcttgt gtaatttctt gcagttttgt
     1381 tttataatct ttaatgagat tttttgcatc aatttgtggg aagttttttt ctataagctt
     1441 taaagcgata tttcttgcaa aatcaaatcc cgcttctaaa tgtatagccc ccataatcgc
     1501 ttctaaggca tcagaaagta tagaaggctt ttctttacct ccattgtttt cttcagccgc
     1561 gctcataaaa ataaaatcgc ccaaatttaa actatttgcg atctttgcaa aagatttttc
     1621 attgaccaaa gccgctctta attttgacaa atccccctca gcgtctttag caaatttatg
     1681 aaaaagatat tcacccacaa ctaaatcaag caccgcatcg cctaagaatt ccaaacgctc
     1741 attattgtaa ggttttttaa aacttttatg agttagagca tggattaaaa gatctttatc
     1801 tttgaactta taggctaatt tttgttctaa taattcaata tttttcatca ttttcccttg
     1861 caatttttaa agcagcttcg cgtgctaaag tatcacacct ttcattttct aaatgcccat
     1921 tatgtgcttt tatccaataa gcttttatct tatggggttt tgccacatcg atatattctt
     1981 tccataaatc tacatttttt ttacccttga aatctttttt tatccaagct tctagccatt
     2041 cattaatact ttgaaccatc aaattagagt ctgtaaaaag tgaaatttca caaggttctt
     2101 ttaaggcttt taaagcttcg ataatcgctt ttaattccat tctattgttt gtagtattag
     2161 cttctgctcc aaaaccttct ttttgatgtt gattatagcg taagatataa gcccatcctc
     2221 caaaacctgg atttttaagg caagaaccat cagtataaat ttcaatatgt ctcattattt
     2281 ttcacttcat aaataatttg acaagtatta aattcataac aaacagggca atgataaaaa
     2341 aacaaaggca ttacgctttt gcattctgtg caacgatatg aaaattcaag ccttgcttta
     2401 aaggaatttt cttttaaaat ttttagcatt ttaaaattag aatttttaaa atttacatct
     2461 ttagactctt catcctctat caaacccaag gcataaaaaa attcaaaata ttctttattt
     2521 tgtagattaa aagctttatt ttctttataa agcaaatcac aaatacttga aaaatcttga
     2581 tttaaaaaaa tatgatattt ttcaaaaaca aagcgtccta gcataggatt attgtctgtt
     2641 tgtagtttta aaatatgctc ttttttttct tcatcactta aactagaagc aagaaaatcc
     2701 aaagctttta aaaattcttt ttcttctttt acattttctc caagctcaaa caaacaaccc
     2761 aaaagctcta aattttcctt atattttctt aatttaagat aaacaatttt taaaagtttt
     2821 aaggcttgta tatttcttgg acgcagtttt aaagcttgca ataaaacttc ctttgcgcgc
     2881 tctaaaaacc ctgctttaaa atatactttt gccaatgcaa aaaagataaa ttcacgctct
     2941 tgcttatcct tacttttttc aagggcgata agataaattt gcgtggcttt ttcaaattca
     3001 ccacttttgg taaaaatttc ggccaaaaaa ctcaaatttc caaaactcaa accctcattt
     3061 cttaacaaat ctttgtggat attatccatc tcaaatttct taataaattt ttcaagcttt
     3121 tgttcttcat ctttgctcgc aaatactttc caaatataat ttgccacagc tacaacgaag
     3181 attaaaacag ttaaaattat aagtcccact aagggatctc tgtattctac gaagaaaaaa
     3241 tccatcatcc tgctctaaaa attttatgcc aaattatagc taaatctttg tataatttta
     3301 tttaaggttt taaaatgata actaaagaaa gtatagaaaa tttatcccaa agacttaata
     3361 ttgttgatat tattgaaaat tatatagaag taaaaaaaca aggttcaagc tttgtttgcg
     3421 tgtgtccttt tcacgcggat aaaaatcctt ctatgcatat aaatcccaca aaaggatttt
     3481 atcattgttt tgcgtgtaaa gcaggcggag atgcttttaa atttgtaatg gattacgaaa
     3541 aattaagctt tactgatgcg gttgaaaaaa ttgcaaatct ttgtaatttt actctaagtt
     3601 acaccaaaga aaaaaatgaa aataaaaaag aattaagaac tatactgcct agcttaaatg
     3661 cttattttaa atccaatctc aaacaccata aagaagcttt ggattatctg tataaaagaa
     3721 cgctaaatga tcaagatata gccaaatttg aattaggttt tgcaggctca agcgaagaca
     3781 gcataagatt gtttcataac gaaaaaatcc ttttagaaga tgctatgagt gtgggtgctt
     3841 taaaaaagga taaaaataat gaattttatg caagttttat atggcgtatc acttttccaa
     3901 tttatgatca taaagactta ttggtaggtt ttgggggacg cactttaaat cctaatgttg
     3961 cagcaaaata tgtgaattct cctcaaaata tattatttga taaaagtaga attttttatg
     4021 cttttaatat agctaaagaa aatatagcca aaaaaaaaga aatgatagta tgtgaaggct
     4081 atatggatgc tatagctttt cataaagcag gttttaacaa tgctgtagca gtgcttggaa
     4141 cagcattaac tgaaaatcat ctgcctttaa tccaccgtta tgaagctaaa gtgattttat
     4201 gttttgataa tgatgaagcg ggattaaatg cggccactcg ttcagccttt ttacttagta
     4261 ctcataaaat agatggtaaa gtagcccttt tagaaggcgg aaaagatcct gccgaacttg
     4321 ttgctaataa tcaaagtgcg aaacttcaca ccctacttga aaaagggatg gatttagggg
     4381 agttttacat tagacgcata ctttcaagct tttctttaaa ttccgcccta gataaacaaa
     4441 aagctcttga aaatatacaa aaatacacct ttagccttga acccttagta gctagttctt
     4501 atgtaggttt ggtttcaaaa cttttaggag tagatgaaaa actcatcgtt cttacttcaa
     4561 atcgaaaacc aagtaaaact atcaatttta acacctcttt ccaacaaacg caaaatcata
     4621 atcctaaatc ccacatcacc gagcttgaac tcttaaatta tttaaaaaac aatcctaaca
     4681 tgcacgagct ttttataaaa attagcgata ttagatgttt taaacataaa gtattattag
     4741 aaaaaatttt agaacacaaa agctatgaag atagtgatat aagagaattt gagagtaaaa
     4801 attttagtaa agatttaagt caaattgagt ttttatgggg aatttgtaag gttaatttag
     4861 cctttttaaa tcatattaat atcacaaatt cttatcttgc tttaaaaaaa caaattttta
     4921 cccttataga aaaaaatttt gtccttctta gtaaaaattt aaacgatcat gaacttgtag
     4981 aatttttaaa agagaatttg tttttactga aaaatgaaaa agatgaagag aaactagaag
     5041 ctttatttaa aaatttgcat agattttttt ctgctaaaaa tttggatatt aaaattttaa
     5101 aaaataattc tgaaaatgat tacaatgaag aaccctttta agcttcattt agaaaaataa
     5161 cgaaaaaact atccgattta ccttttttta aacacaatca cgctaaagta tagaaaaatt
     5221 tattaaggat atattatgat gccttttagc gatgaagagc ttataaatcc tgtaaaagca
     5281 agtttagata aaagtatgcc tatgttagaa cgcgatggag gcggtcttga atttttaggg
     5341 attaaaaatg gtgtggttta tgttcattta attggggctt gcaaaggatg cgcttcaagt
     5401 ggaacgacat taaaatacgg acttgaaaga caacttaaaa tcgatataca tccagaaatt
     5461 actatagtta atctaaacgg tggagctgaa gattttgcaa aactataaaa aacttggaat
     5521 cgagcatttt ttacgcaaag actttaaaac agcaaaaata tatttttctt tagcttatga
     5581 aaaacgcaaa aacaaacgct tgtttcattt tatcactctt tgtgatctag ctttaaaatc
     5641 tccaaaagaa gcgttattac tttttgaatt ttatttagaa cattatcaaa ttaaaaatat
     5701 cgataaagat ttagaagaaa ttttaagcac tatagagctt aaaaatgaaa aaaataccga
     5761 tgaaacagaa aatgaaattc aagaagctca tactttaaac tacaaagatt ttctaaaaag
     5821 tgaagagcaa atcggcttta aaaagagttt tgaaaatatt atacatagca caaaattagt
     5881 cattgataac cgtgatgatt ttttagattt tttagaaaaa ttacttgata atggctataa
     5941 agatatgact ttaaactata tagaaagcgt tatgccgcac ttttgggcaa acgaacgctt
     6001 tataaaactc caagaaaaac ttataggatt taaaagtgaa attaaagctt gatcagtctt
     6061 ttattaccga caatacctta gaatgcgaaa aagattgcta ttttttaaaa actgcacaaa
     6121 atatgaattt tgctagtgat gccttagaaa aaggtgcaaa aatcattgat gtagaagaat
     6181 gcaaaaaact tttaaaaatc gatgaaaata tcaaaatcat aggaattaca ggaaccaatg
     6241 gcaaaaccac caccgcagcg gctatttatt cgattttact tgacttaggt tttaaatgtg
     6301 gactttgtgg cactcgtgga gcttttatca acgatgagca aattgatgaa aagtctttaa
     6361 ccacttcgcc tattttaaaa actttagaat acttacaact tgccacacaa aaaaaatgtg
     6421 atttttttat tatggaagtt agctcgcatg ctttggtgca aaatcgcatc gaaggcttga
     6481 aatttgcagc caaaattttt actaacatta ctcaagatca tttggatttt catggcaatt
     6541 ttgaaaacta taaagcagca aaagagctct tttttaccga tgagagttta aaatttatca
     6601 acaaagatac tttaatgatt aaatttaatg tgcgcaatgc ttttacttat ggcatagaaa
     6661 atccttcttt gtatcaagtt aaagcttatt ctttagaaga tggtatcagt gctattgtag
     6721 cattaaaaga tcaaagtttt catattgact cgcccctact aggacttttc aatctttata
     6781 atcttctagc cgctagtgct tgtgttaatg aacttgtaaa gccgaattta aaagacttag
     6841 aaaaagctat cagtggcttt ggcggggttt gtggtagggt tgagcaagtg gctaatggcg
     6901 taatcgtgga ttttgctcac actcctgatg gcattgaaaa agtacttgat acactcaaaa
     6961 ataaaaaact catagtagtt tttggagcag gtggagatag agataaaacc aaacgacctt
     7021 taatgggaaa aatcgttgag cattttgcaa aaatagccat tatcacaagt gataacccgc
     7081 gtagcgaaga acctaaagat atcatgaatg aaattctatc aggctttcaa aaccctgata
     7141 aagctttgat gatagaagat agaaaagaag ctataaataa agctttaaaa cttaaagaaa
     7201 aagacgattt agtagttatt ttaggcaagg gtgatgaaaa tacccaagaa atcaaaggga
     7261 taaaacaccc ctttagcgac aaagcgattg tgaatgaaat tttaaaaaat caaggataat
     7321 aaatgtttga aaatatggat ttttctaaga tgggagaact tttaaatcaa gttcaagaaa
     7381 aagcaaaaaa tatagaatta gagttagcca atcgagaatt tagtgctaaa agtggggcag
     7441 gacttgtgaa agtcagtgct aatggcaagg gtgagattat cgatgttagc attgatggtt
     7501 ctttacttga agataaagaa tctttacaaa ttttactcat ttctgctata aatgatgttt
     7561 tagctatggt agcacaaaat cgatcaagct tggccagtga tgttttagga ggatttggga
     7621 aattatgaaa tttttgtttt ttttagtaac ctttttaata tccctaagtg caatcgagcg
     7681 tcctaaattt gaagattttg ctgcaggcta cgaaagaaat aaagccagta tgcttaatta
     7741 tgaaggaatg cctgcttttg ccttgagtga aaatttactt gcggttttaa aacaacctaa
     7801 tgtcaaactc aataaatatg taaaatatga tccattttta aatctttatc ttgtaagaac
     7861 tgattttagc ttaatcccta cacctatggg agatgaagaa aaacttacac gcaatgattg
     7921 gataggaatt tgggatccta atagagctta tataggtcac attaaatatc ttgcgcaaaa
     7981 tattgatgaa aaagatcagc ttgatttttc taccaaagtg gggcttttag gcactccttg
     8041 ctgcgaaatg atgggaattg ctcttaataa tagctccttt ataggaaatc gttacttaaa
     8101 gcattttatg aaatataacg atgtatattg gggcgatata ggggttgatt ttgcggtgcg
     8161 tgaaaataaa atttatgtga ataatgttcg aaaaagtggg caatttctaa tcaacgatga
     8221 aatcataagc gtagatggaa cactagttaa agatataaga aagctaaatg aaaaaattct
     8281 ctttgcagat cgtggaagca cactttattt tcaagtattg cgagataatg tggatttaaa
     8341 tatttctact gaagtttttg ccaaagattt aagcaaattt aatctcccaa gcaataaacc
     8401 aaaaccaaaa ccaaccaatt ttagaagcaa tataggtcta agtgtaaatt caagtcttat
     8461 agttacaaaa gtagacgcag gctctaaagc tgctttagca ggatttatgg taggggataa
     8521 aattttgcgc gcaaacaatg tgacactaaa agattttaaa gaacttcaaa ccctacttgg
     8581 tacaggaaat gattttaata ttttaatcga acgcaaaagt gataaacttc ctttattggg
     8641 attaaacaat gatttaggag gagttcattc aggtggagat ggaaaatttc aatttttcat
     8701 aaggcttgta aagtgaaaga actctttatc aaacatttag aaaatcatct accaaaagtt
     8761 caaagcttcc atcctttttt taatgaagct ttggcaaaga tgctaaaagc aggtggaaaa
     8821 cactttcgtg ctcaattact cttaggagtt gttcaaaata aagcacctca tcttatcccc
     8881 aatgctctaa acgcggcttt ggccttagaa tttatccata cttactcgct catacacgat
     8941 gatttacctg ctatggataa tgcagattta agacgcggaa cgcctacttt gcataaaagc
     9001 tatgatgaaa ctacagctat tttagtaggc gatgctttaa ataccgaagc ttttttactt
     9061 ctatctaatt taaatttaaa agaaagcatt aaaattaatc tgattagaac tctagctttt
     9121 aatgcaggaa tcaatggtat gattttgggt caggctattg attgttattt tgaagataaa
     9181 aaattaaatt tagaagaact tgagttttta cacacacata aaaccgcaaa acttatagca
     9241 gcggctttaa aaatgggctg cgaaatttgc gaactcgatg aaaaagaaag cgaaaaaatt
     9301 tatcaaatag gtctaaaact tggacttatt tttcaaatca atgatgatat catcgatgaa
     9361 acaatgagcg aagaagaaag tggaaagcca agcaaacatg atgagcataa aaattctttt
     9421 gtgaatttat taggacttga aaaggctatt caaagtaagg aaaatttgat taatgagtgt
     9481 aaaaatgatc ttggtgatct tgatgctaat ttagcacaca tgattaaaag tttaatgatt
     9541 aaatatttat aaaggttaca aatggatcta tcgatattac aagaacaagc aaatacttta
     9601 agatttttaa gtgccgatat ggtgcaaaag gctaattcag gccacccagg tgcacccttg
     9661 ggaatggctg atattttaac ggttttaagt tatcatcttt ctcataatcc taaaaaccca
     9721 acttggctaa accgcgatag gcttgtgttt tcaggcggac atgccagtgc tttgctttat
     9781 agctttttgc atttaagtgg ttatgattta agtttagatg atattaaaaa tttccgccaa
     9841 cttcattcaa aaactccagg ccatcctgaa atttcaactc aaggagtaga gattgctaca
     9901 ggcccattag gacaaggtat agctaatgct gtaggctttg ctatggcagc taaaaaagct
     9961 caaaacttac taggaaaaga attaatcaat cacaaggttt attgtctttg tggagatggg
    10021 gatttacaag aaggaatttc ttatgaagcg tgttctttag caggacttca taaacttgat
    10081 aatttaatca tcatctatga tagcaatgaa atttctatcg aaggagatgt aagcttagcc
    10141 tttaatgaag atgtaaaaat gcgttttgag tcacaaggct ttgaagtttt aagtatcgat
    10201 ggacacgatt atgaagcaat tgataaggct ctaaaacaag ctaaaaaagc caacaaacct
    10261 tgccttatca tcgcaaaaac aaccatagca aaaggcgcag gagagcttga aggaagtcac
    10321 aaaagccacg gcgcaccttt gggtgaagag gttattaaaa aagccaaaga aaaagcagga
    10381 tttgatccaa atttaaattt ttatatacct aaagcagcaa aaattcgctt cgaaagtgct
    10441 gtagaacttg gagatttaga agaagctaaa tggaaagata agctcgaaaa atcagaaaaa
    10501 aaagaactct tagaaaaact tttaaatcct gattttagca agataaatta tcctgatttt
    10561 aaaggcaagg atttagctac aagagatagt aatggagaaa ttttaaatgc tctagctaaa
    10621 gatttggaag gatttttagg cggaagtgcg gacttagccc catctaataa aaccgaactt
    10681 tatggaatgg gtgattttgc ggaaggaaaa aatattcatt ttggtatcag agaacacgct
    10741 atggctgcga tcaataatgc ctttgcaaga tatggaattt tcttaccttt ttcagcaaca
    10801 ttttttatct ttagcgaata tttaaaaccc gcagctagga tagcagcttt aatgaaagtc
    10861 aaacattttt tcattttcac acatgatagc ataggcgttg gcgaagatgg accaactcat
    10921 caacctatcg aacaactcag cacttttaga gctatgccaa atttcttaac ctttagacca
    10981 gctgatggag tggaaaatgt taaagcttgg caaatagctt taaatgcaga tattccaagt
    11041 gcttttgtac tttcacgcca aaagcttaag gctttaaatg aacctgtttt tggtgatgta
    11101 aaaaacgggg cgtatttact taaagaaagt aaagatgcta aatttacgct tttagcaagc
    11161 ggaagtgagg tttctctttg cttagaaagt gcaaatgaat tagaaaaaca aggctttgct
    11221 tgtaatataa tctccatgcc ttgttttgaa ctctttgaaa agcaagataa agcttataaa
    11281 gataggcttt tacagggtga agttataggg gttgaagcag cacattctaa tgagctttat
    11341 aaattctgcg atagggttta tggcatagaa agttttggag aaagtggtaa agataaagat
    11401 gtatttgagc attttggttt tagcgttcca caaattttaa atttcattct cgataagtaa
    11461 aatggaggca aatttcaaat ttcaaaaaga agaaaataaa gtttttattt ttggaatttg
    11521 ggataaaacg agtgtgtcta agattaaaat caaagatcta ttgagccaaa tttctcaaac
    11581 aaattgtatt tttgatttta gtcaattaaa tgaaatcgat atggctggag tgagattttt
    11641 tcttgctcta gagcatgatt tgaaaaaaaa cgatatcttg attttaaaac aaggattaaa
    11701 cacacgcttt aaaagccttt ttgagctttg tgaaaaaaac tatcaaagaa ttaatgaaaa
    11761 acaagagaaa aaattcaatt ttacagactt ttttatttct ttaggaattt taagttttga
    11821 tcttttaaag attttgcaaa aatttattaa ctttacgggt gcttttttta ccagtctttt
    11881 tttatgtata aaaaatccta aaaatttccg ctttatatct tttttatatc atattgaaaa
    11941 ttcagctttt aaagccttgc ctattgttat tttaaccgct cttttagtcg gggttgtgct
    12001 tgcatatcaa gctgcttatc agcttgcaca atttggagct aatattttca tagtagattt
    12061 agtaggaatt tcagccacta gagaacttgc tcctttaatc gccgcgatag tcatagcagg
    12121 tagaagtgca agctcttata cggcacaaat tggggtcatg aaaatcacag atgagatcaa
    12181 tgctatgaat accatgggct ttcgctcttt tgaattcatc atcattccgc gggtcatggc
    12241 tttagttatt gccatgcctt taatcgttgc tctaagtgat gcgatcagta tattaggagg
    12301 aatggtagta gcaaaaataa atcttgatat atcctttgga gaatttttaa ggcgctttag
    12361 ggaagctgtg gaaatgaaac atatcatcat agggcttgca aaagctccta tttttggttt
    12421 tttaatagga cttattgctt gttttcgggg atttgaggtt aaaaatacca ctcaaagtat
    12481 aggaatttat actacaaaaa gtgttgtaaa tgctatattt tgggtaatag catttgatgc
    12541 tttattttct gtggttttaa ctataatgga agtttaaatg attataaaag cgcaaaatat
    12601 tatcacccga tttggaaata aagttgtcca tgatggagtc agttttgaaa ttaacaaaaa
    12661 cgaaattttt gggattttag gaggaagtgg aaatggcaag tctgtactct taaaacaaat
    12721 gctaatgctt gaacattttg atgagggaga atacgaaatt ttaggcttta agctaaaaaa
    12781 cattagcgag gaagatgctt tagagctgcg taaaaaatgg ggtgtagtat ttcagttttc
    12841 tgcactcttt agctttttta gcgtttatga aaatatagct atccctctta aagaatatac
    12901 gaatttagat tccattgcta taaaagaact ggtattgatg aaactcaaaa tggtcggttt
    12961 aaatgaagct gttttaaaac agcttccaag cgagctaagt ggcggaatgc aaaaaagagt
    13021 tgctattgct agggctttgg ctcttgatag taaattactt tttttagacg agcctacttc
    13081 tggacttgat ccgcatagta gtcgtgaatt tgatgatttg atactagaac ttaaacaaag
    13141 ctttgatctt aatattgttt tagtaacaca cgataaagaa agtatgaaaa atctgctcga
    13201 gcgttttatc atcttagaag ataaaaaagt tgccttttgt ggaaattatg aggagctaag
    13261 ggcgcaaaat gaaagattgt ttaaaagatt tatggagtaa aagtggaaaa taaagcaaat
    13321 tatttttttg tagggctttt tgtttttgga gttttttttg ctagtattgg tttcatgctt
    13381 tggcttggaa gatactcaaa agaagaaagt tttgaatact atgaaattca tacacaagaa
    13441 tctgttgcag gccttggaat caaagctcct gtaaggcttt taggagtaga gataggaaat
    13501 gtggaaaata tcagtattta tgataaagaa aatttagggg taaatatttt aattaaaatc
    13561 aaaaaaggaa cccctataaa agaagatact tttgcaactt tgcaatttca aggcattaca
    13621 ggacttaaat ttgtacaact tcaaggaggt tctaaaaaca gtccaaaact tcaagtaaaa
    13681 ggtaaagaag aatttcccgt gattcaattt aaagaaggtt tttttgctgc tatagataga
    13741 caaagcgagc acatcttttc tttgataaaa agagcagatg ataaatcaaa agagcttttt
    13801 agtgataaaa atataaaaaa tttagaaata cttttagata atttagcaca actaagcacc
    13861 actttaaata aagattctaa aacattaaat cacaatatcg caaacactag cttaaaactt
    13921 ggagaaatgg cagagaatgt aagcttaagt gcaaaaggtt ttaatgcaag tttaaaggat
    13981 atccaagaag gagctttagc gcttagctct tttgcaaaaa aagccaatgt taaacttgat
    14041 tcttacgatg acttacgact ttccttagca gaaaatttag aacttttgaa aaaagtgctt
    14101 atagaaagca atatcttgat acaaaatcta caaaaaagtc catcggattt aatttttaaa
    14161 gaaactaaac ccaaactagg accaggagaa aaacaatgaa aaaattcata tacattacta
    14221 tcttagcctt tatatttaat ggatgttcaa ttccaactag cactcttgat aaaacgcaaa
    14281 gctttatact taaaaatgat gaacttcctc ttcaagccaa ttttattaaa agcgataaaa
    14341 ttcttaaaat tcaaaatgcg tccttgcctt tatatcttca ttcaagatca attatttatg
    14401 tgcaaaaagg tataagcaag gcttatgcgt atcatttttg ggcagattta cccaataatc
    14461 tttatcaatc cttgctgcta tccaaatttg aacaaagtca aatctttaaa gccctgcttt
    14521 cccaaggaag ctctgtggga agtgattata tacttgaaag caggatagat tcttttgaac
    14581 aagtggttga tgaaaatgaa aattatgtaa gcatttctat tagtataaat ttcatcgacg
    14641 caaaagaaag taaaatcatc gctcatcgcc tgttttcaat caaagaaagg gttaaaaaaa
    14701 tagatatttt tgatgtctat caatcctttg aaaaagcttt aaattctcta ggaaatgaaa
    14761 tagttttatg gatcaatgcc acacttgatg aaaaatagga acactttttg ctttttaaac
    14821 ctttagcaat attttttgaa aggtgtaaaa tgaaaaatga attggatgtt tttaaaaagc
    14881 acttgggtga aatacaaggc gtaagtgagt ttaaagctac acaaatttgc tcacaaataa
    14941 atgatgcaaa tgattttatc ggtgctctgc aaatacttga tttaacgctt aaaaaaattg
    15001 aaaaaagtat cacagaaaga cttgatgaac aaaacgatga tttacaaaaa agaaccttag
    15061 atgcaacaag ttctcaactt atccaaaact gctcttttat gggtacagca ctttttggaa
    15121 atatttttaa tgtatatgta ggtcaaaaac tttttgaatt tgaaatttca aatcctcttt
    15181 tagttttaga aaaagcaggg tatgaaggag ttttagctta tattcaagat aaaagggatg
    15241 aaattaaaga tattttatgc aaattatcaa gtgctattac catgggaata agcatggata
    15301 atatgaattt ttctgactct gcaacaaact ttaaaaatct tttcagataa gagttaaaac
    15361 tcttatcgct ttaaacatac tcattaaaat taatcttaag aggttttcat attttagctt
    15421 aaagagatat tccgctcttt ttcaagctag gttgaaaaaa agggggaggg aagcaaccta
    15481 gcctgtgaga tctttgaaga tctctttaaa
//
LOCUS       DBBXOW010000039        14359 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.040, whole genome shotgun sequence.
ACCESSION   DBBXOW010000039 DBBXOW010000000
VERSION     DBBXOW010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14359
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.040"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            15..2005
                     /locus_tag="ACJE1S_001182"
                     /pseudo
     CDS             15..2005
                     /locus_tag="ACJE1S_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798573.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
     gene            2292..3095
                     /locus_tag="ACJE1S_001183"
     CDS             2292..3095
                     /locus_tag="ACJE1S_001183"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HGG0806734.1"
                     /translation="MDNLHALILGIIEGLTEFLPISSTGHMILGTTILGIDINEFWKS
                     FLIIIQLGSILAVLFVFWRKLFKGLDIWFKLAVGFFPTGLIGFVLYKYLKELFNGYVV
                     VVMLILGGIVFIVIELAHKNKEYKTNSLEKVSFLQAFCIGIIQSLAMIPGTSRSGASI
                     IGGLLLGLNRKTAAEFSFLLAIPTMIVATAYSIYKEPELLSNANALIPLSIGFVTAFV
                     VAVFVIKFFLKFISKFDFIPFGIYRIVLGILFFYLYYSGILNSGSEFKL"
     gene            3227..5035
                     /gene="thrS"
                     /locus_tag="ACJE1S_001184"
     CDS             3227..5035
                     /gene="thrS"
                     /locus_tag="ACJE1S_001184"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HGG0806735.1"
                     /translation="MEKEVIAYLDDEKIVDSQSKNSIDLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYSEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKSEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPAKA
                     IGDDEIWDTATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPERFKLEYTDSNNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPISDSHIAYAKEIQRALLELNIDSEVYEKNESLSKKIRTAEKQKLPMILVLGDEEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            5032..5550
                     /gene="infC"
                     /locus_tag="ACJE1S_001185"
     CDS             5032..5550
                     /gene="infC"
                     /locus_tag="ACJE1S_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HGG0806736.1"
                     /translation="MSKEKEVLLNEEIRADEIRCIGDDGKAYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENDANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            5590..6693
                     /locus_tag="ACJE1S_001186"
     CDS             5590..6693
                     /locus_tag="ACJE1S_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HGG0806737.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLGFLNKGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLENYSKLINKCYLSNKDKNLTELLKHYHKILTQ
                     NLEFQAGFISELYAPKNEACIQKDERVFYTLKNALYLDTLRQKIEKEIPEELKHFFIA
                     PLIYEASVHSNTSGVFKGFYKGRDGVGKFGGEAQNALKRIKGDIELKMPIFSNFSCEF
                     EVVQKDANLLAKELENIDVAYLDPPYNQHPYSSNYFMLNLIANYQRPDEISKISGIPR
                     DWNRSIFNKEKQAEDALFELINDLKAKIILLSYNCEGFVKKEKFLKRLQSLGKCQILE
                     QKYPTFRASRNLKNRSIHIHEQLYILKKKYLIY"
     gene            6886..7914
                     /gene="argC"
                     /locus_tag="ACJE1S_001187"
     CDS             6886..7914
                     /gene="argC"
                     /locus_tag="ACJE1S_001187"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HGG0806738.1"
                     /translation="MRLKVGILGASGYAGNELVRILLNHPKVEISYIGSSSSVGQSYT
                     KLYPNTPLNLNFEDKNLDELELDVLFTATPHEFSAKLFSESLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLKNAVYGLCELYQEEIKNANLIANPGCYTTCSILSLYPLF
                     KEKMIDLNSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYGLASHRHTPEIEEHLSY
                     AAGEKITLQFTPHLVPMQRGILTTAYANLKHSVSEKEIREIYQKYYQDRKFIRLLPPQ
                     SFPQTRWVKSSNFADINFSIDERTNRIIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            7925..8371
                     /locus_tag="ACJE1S_001188"
     CDS             7925..8371
                     /locus_tag="ACJE1S_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HGG0806739.1"
                     /translation="MQVRAMQKSDYEGVYKLWCDIKGFGIRSIDDSKENIEKFLDRNP
                     NLSAVAVIDQEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLEALKSEKI
                     NKIALIAFKSNDLGNEFWKHYGFTLREDANYYDLSLNSHNQTSFNV"
     gene            8381..9220
                     /gene="argB"
                     /locus_tag="ACJE1S_001189"
     CDS             8381..9220
                     /gene="argB"
                     /locus_tag="ACJE1S_001189"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HGG0806740.1"
                     /translation="MQKYLEKANVLIEALPYIRKFSSKIILIKYGGSAMENEELKHCV
                     MQDIALLKLVGLKPIIVHGGGKDISKMCEKLGVKSEFNNGLRVSDQATTEVASMVLNY
                     INKNLVHSLQNLGVKAIGLCGKDGGLLECVQKDENLGFVGEIQKVNSSVLQDLLEKDF
                     LPIIAPIGMDENFNTYNINADDAACAIAKALKAEKLAFLTDIAGLYENFEDKNSLISK
                     ISITQAKALVDKIQGGMHVKLKSCIDACESGVKKVHILDGRVKHSLLLEFFTDEGIGT
                     LVG"
     gene            9224..10414
                     /locus_tag="ACJE1S_001190"
     CDS             9224..10414
                     /locus_tag="ACJE1S_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HGG0806741.1"
                     /translation="MKMNYKEQSHIIPTYKRFDIVLESGEGVYLLDDKGKKYLDFSSG
                     IGVCALGYNHAEFNAKIKAQVDKLLHTSNLYYNENIAQAAKHLAKASGLERVFFTNSG
                     AESIEGAMKVARKYAFNKGIKGGNFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDFSSVERLVNEKTCAIILESVQGEGGVNPAQKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHSGILPDVMTSAKALGCGLSVGAFVVSEKVAQKSLEAGDHG
                     STYGGNPLVCTGVNAVFEIFKKEKILENVSKLTPYLEQSLENLIKEFRFCKKRKGLGF
                     MQGLSLDKSVKVAEVIKKCQENSLLLISCGENDLRFLPPLIIEKSHIDEMSEKLRKVF
                     KSFE"
     gene            complement(10434..11063)
                     /locus_tag="ACJE1S_001191"
     CDS             complement(10434..11063)
                     /locus_tag="ACJE1S_001191"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HGG0806742.1"
                     /translation="MNAFEQKRCQSMAEEIAQKIFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALNFKDADSVLEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFEDGQNGWKNYAPYDRILFSAYTTQLPEILL
                     DQLSDGGILVAPILHNGKQFITRITKNGTHLQKEILEECLFVPIVDGKE"
     gene            11182..11721
                     /locus_tag="ACJE1S_001192"
     CDS             11182..11721
                     /locus_tag="ACJE1S_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HGG0806743.1"
                     /translation="MLIRFKDKFPNLGQNVFVAEGAKIIGEVEIGDESSVWFNCVLRG
                     DVNFIKIGKRTNIQDLTTIHVWHREFNKDGSLKDAGFPTCIGDDVTIGHNCVIHACKI
                     GSRVLVGMNAVIMDDAAIGDDSIVGAGSVVTKGKKFPPKSLILGNPAKLIRELSDEEV
                     AFLKQSALNYVEFKNDFLD"
     gene            complement(11815..13203)
                     /locus_tag="ACJE1S_001193"
     CDS             complement(11815..13203)
                     /locus_tag="ACJE1S_001193"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HGG0806744.1"
                     /translation="MKKDSYTKPNNTLLCDFYELTMMQGYFLNGFENKTAYFDIFFRK
                     IPDHGSFAIFAGLEDILDFVSCLHFDEDDIAYLHSQGIFKEEFLRYLKNFKFKGEIYA
                     MQEGEIIFPNEPLMIIKANAIEAQILESFLLLSINHQSLIATKANRIVRAAKNLSVLE
                     FGTRRAHGSEAALKGARAAIIGGCKASSCTLAGKNYSIMTSGTMAHSWVQMFDDELSA
                     FCHYLELYPQNPTLLIDTYNYKQGLENAVKAFKKFKIKQCGVRIDSGNLEILSKEIRT
                     ILDKNDLKECKIIVSNSLDEKSINKLLKNDAPIDAFGVGEKLITASSDPIFGCVYKLV
                     AIEEDKLITPKIKISEDKQKITLPHFKKLFRIYDKNTQKMLFDELYIYNEKLPKLDEN
                     LERKELLKCVFKEGKILNKQKNVEEIALYAKSQISKLDEKFLNFNNKEKYKIKLSKDL
                     TKLRQNFTNTTL"
     gene            complement(13225..14247)
                     /locus_tag="ACJE1S_001194"
     CDS             complement(13225..14247)
                     /locus_tag="ACJE1S_001194"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HGG0806745.1"
                     /translation="MQRKRIYNPGSNETLTDRKVFSGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLVAINLDKIYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(14262..>14359)
                     /locus_tag="ACJE1S_001195"
     CDS             complement(14262..>14359)
                     /locus_tag="ACJE1S_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG0806746.1"
                     /translation="GLIFGLFISFLRKDKLNLHDILTQTCIVTKI"
BASE COUNT         4787 a         1951 c         2674 g         4947 t
ORIGIN      
        1 tgattcgagg gaatatgcaa aaaacatact ctttactcga actcaccttg cgcggtttgc
       61 ttttgggaag tattttaact attattttta aagcttcaaa tgtatatttg gggttaaaag
      121 tgggacttac tttttcatca tcaattccag ctgtagtcat ctccatggca gttttgagtc
      181 tttttaagac ttcaaatatt ttagaaaata atatggttca aactcaagct tcagcagcag
      241 gaactttatc atcagttatt tttgttatcc cagggctttt tatgtgtggg tattggagtg
      301 aatttccact ttggcaaact tttatgatat gtctttgtgg tggcggactt ggagtgcttt
      361 ttaccatacc gttaagaagg gctatggtag ttgaaagtaa acttgcttat cctgaaggta
      421 gggcagcagc tgaaatttta aaagtagcca ataaagatca aagtgataaa aaaggcaaac
      481 agggtgtaaa agaaatagcc ttaggctctt ttatagctgt ttttttagtt tgttaagcaa
      541 tggttttaaa cttgctgcaa gtgaaagcag tttggctttt atttggaata aaatggcctt
      601 tggtttttca gcaggatatt ctttagcgct tttaggagca ggatatttgg taggtttagc
      661 aggtgctata gcactttttg tagggatgtt tttagcatgg ggagttttta ctccttatct
      721 ttcaagtttt gaatttgatg gtgtgaaaaa tgctagtgaa cttgcttcta gtgtttgggc
      781 ggctaaagtt agacttatta gtactggagc tattgctata gcagcgcttt ggaccttaat
      841 agaactttta aaaccagtga tttctggcat taaagaaatt attaaaaatg ttacaatttc
      901 taatacaaaa agccaagaaa gcaccgatta agatctttct ttaaaaagca tttttatact
      961 ttttataatt atgactatag gacttttcat tactttttat agttttgtat cggatgcaaa
     1021 tttaaataat tattatcaaa ttttatttgc ctttgttgga actttagttt ctgttttaat
     1081 aggttttttt gttgcagcag cttgcggata tatggcagga cttgtaggat cttcttctag
     1141 tcctatttct ggaatcgggc ttattgggat tattgtttca tccttggtta ttttactttt
     1201 gggtgcaaat ttatttgatg atcctatgct ttctaaattt gctatagcct tggctatttt
     1261 tactacaagc gtaattgtag caactgctgc tatttcaaat gataatttac aggatttaaa
     1321 aacaggatat ttagtgggcg ctaccccttg gaaacagcaa gttgctttgc taataggttg
     1381 tgtttttggt gctttggcta tagttcctgt tttaaattta ctctatcaag cttatggttt
     1441 tgttggagct atgccaagag agggtatgga tctttcatct gcgcttgcag ctcctcaggc
     1501 aaatttaatg agcactatag cacaaggaat ttttaatcac aatatagagt ggagttatat
     1561 agcatttgga gtagttgtag gtatatttat cattattata gataagatac taagaaaaaa
     1621 tggcaattta tccttaccac ctttggctgt gggtattggt atttatttgc caccatctgt
     1681 aaatatccct ttggtaattg gtggaatttt aaaatatttt gtgatgagat atttagcaaa
     1741 caaatatcaa aataattctc acaaaaatga aaaaatagca acccatgaac aaaaagggac
     1801 tttatttgcc tcaggactca tcgtaaggga aagtattttt ggcgttatta tagctgcaat
     1861 tactgttttt tctgttagca tgggcggaag tgaaagtcct ttgaaattaa gctttttaaa
     1921 tatacacaat aatgaattat taggtttgat atttttcata ggagtcatac tttattttat
     1981 caagcgtatt gttaaaattc attagaattt aaaacattca taaagaagaa ttttaaattt
     2041 tttataaaat tcttcttagt ttatttatct tgtaacttta tttttaatat cttgatccaa
     2101 agtataaaat gctccaatag taaaaaattg tattcttacc caagccagta aaatgagaaa
     2161 taaaactcaa aattaatcag ctttttcata caaatagttt atttttatcg tctgctttaa
     2221 gaaattgttt ttatattttt gtcgtgttta aaaaaagttt gtagaattct ttttttattt
     2281 taaggaaaaa tatggataat ttacatgctt taatactagg aatcattgag ggtttgactg
     2341 aatttttacc catttcttct acaggacata tgattttagg gacgactatt ttaggtattg
     2401 atattaatga attttggaaa agttttttaa tcattataca actaggatcg attttagcag
     2461 tgctttttgt gttttggcgt aagcttttta aaggacttga tatttggttt aaacttgcag
     2521 ttggtttttt tcctacaggg cttataggat ttgtgcttta taagtattta aaagagcttt
     2581 ttaatggcta tgtagtagtt gtgatgctta ttttaggtgg tattgttttt attgttattg
     2641 aattagctca taaaaataaa gaatacaaaa ccaattcttt agaaaaagtg agttttttac
     2701 aagctttttg cataggtatt atccaatctc tagcaatgat tccaggtact tcaagaagtg
     2761 gagcaagtat tataggtgga cttttattag gacttaaccg caaaacagca gctgaattta
     2821 gctttttact tgctatccct acgatgatag ttgcaactgc ttatagtatt tacaaagaac
     2881 ctgaacttct tagcaacgct aatgctttaa tccctttaag tataggcttt gttacagctt
     2941 ttgtggtagc ggtttttgtg attaaattct ttttaaaatt catttcaaaa tttgatttta
     3001 ttccttttgg aatttatagg atagtgttgg gaattttatt tttttatttg tattatagcg
     3061 gaattttaaa ttctgggagt gagtttaagt tataaacaaa tattaaattt attctaagat
     3121 ttttttaaaa ataagctgaa tttcaaaaaa aattaagtct tagaaagcta aaattagaac
     3181 tttataaaca ctcacagagt cagtgagcaa aataaggtta aaagttatgg aaaaagaagt
     3241 tattgcatac ttagatgatg aaaaaatagt tgattctcaa agtaagaatt ctattgattt
     3301 aaaagaaatt tattttgata attctaaaga aagtttagaa gtaatccgtc attcttgtgc
     3361 gcatttaatg gcacaggcga ttaagagttt gtattctgaa gctaaatttt tcgttggtcc
     3421 tgttatagaa gatggatttt attatgattt tcgtgtggaa agtaagattg gcgaagaaga
     3481 tttagtaaaa attgaaaaaa agatgaaaga gcttgctgaa gcaaagattg aaatttcaaa
     3541 atatgaaatc acaaaaagcg aagctttggc taaatttcaa aatgatgatt taaaacaaga
     3601 agttttattg cgtattcctg atggagctgt aagtatttat aaacaaggtg aatttgaaga
     3661 tttgtgtcgt ggtcctcatg tgccaaatac gaaattttta cgctttttta aactcactcg
     3721 tgttgcagga gcgtatttgg gtggcgatga aaaaagagaa atgcttactc gaatttatgg
     3781 aactgctttt gcagataagg aaagtttaaa agagtattta accattattg aagaagctaa
     3841 aaaacgcgat catagaaagc ttggaacaga gcttaagctt tttacttttg atgatgagat
     3901 cggaggaggt cttcctattt ggttgagtaa tggtgcaaga cttagatcta aacttgaaca
     3961 tatgctttat aaaattcatc gtttacgtgg ttatgaacct gtgcgcgggc ctgaactttt
     4021 aaaagcagat gcatggaaaa tcagcgggca ttatgcaaac tataaagaaa atatgtattt
     4081 tacacaaatt gatgaacaag aatatggcat taagcctatg aactgtgtgg ggcatattaa
     4141 aatttatcaa agtgatgtaa gaagttatcg tgatttgcct ttgaaatttt ttgaatatgg
     4201 cgtggtacat agacatgaaa aaagtggcgt tttacacgga ctttttaggg taagagaatt
     4261 cactcaagat gatgcgcata tcttttgtat gccaagtcaa atcaaagagc aagtgcttga
     4321 aattttagcc tttgttgata atttgatgaa attatttgac tttagttatg agatggaaat
     4381 ttcaaccaaa cctgctaaag ctataggcga tgatgaaatt tgggacacag ctactaaagc
     4441 tttaaaagaa gccttagatg aacaaggctt aaaatatggc attgatgagg gtggaggtgc
     4501 tttttatggg ccaaaaatcg atattaaaat cactgacgct ttaaaaagaa aatggcagtg
     4561 tggtaccata caagtagatt ttaatcttcc tgaacgcttt aagctagaat acacagatag
     4621 taacaatgag aaaaagcagc ctgtaatgtt gcatcgtgcg attttaggtt cttttgaaag
     4681 atttatagga attttaactg aacattgcgc aggggagttt ccatttttta tcgcaccaac
     4741 cgcagtgggt atagtgccga tttctgattc tcatattgct tatgcgaaag aaattcaaag
     4801 agccttgcta gaattaaata tcgatagcga agtatatgag aaaaatgaga gcttaagtaa
     4861 gaaaattcgc actgctgaaa aacaaaaatt acctatgatt ttagttttgg gcgatgaaga
     4921 ggtggcaaag cgaagcgttg ctttaagaga tagaagagct aaagaacaaa aaaatcttag
     4981 cttggacgaa tttattaaat tagttaagga gaaaatgagt gaggtacatt tttgagtaaa
     5041 gaaaaagaag tattgctcaa cgaagaaatt agagcggacg aaatcagatg tataggtgat
     5101 gatggcaaag catatggcat tatcagcagt gatgaagctt tagagattgc aaatcgttta
     5161 ggacttgatc ttgtaatgat agctgcagat gcaaagccac ctgtttgtaa gattatggat
     5221 tatggaaaat tccgttatca gcaagaaaaa aagcaaaaag aagcaaagaa aaaacaaaaa
     5281 gtaatcgata ttaaagagat taaactttct gtgaaaattg ctcaaaatga tataaattac
     5341 aaagtaaaac atgctttaga atttttagaa caaggtaagc atgtgagatt tcgtgtgttc
     5401 ttaaaagggc gtgaaatggc gactcctgaa gcaggtgtag ctttgcttga aaaaatttgg
     5461 actatgatag agaatgatgc taatcgtgat aaagagccaa attttgaagg acgctatgtt
     5521 aatatgcttg taactccaaa aaaagcttaa tctgttttta cagataagct ttttaaaggt
     5581 ttaaaaattt tgaaggaaaa tccctctttt ttaaaagaac aaatcattac ttatttaggc
     5641 aataaaagag cacttttagg atttttaaat aagggcttta aggtagctaa aaaagaactt
     5701 ggtaaagata aatttagttt ttgtgatata tttagtggct caggtgttgt aagtcgtttt
     5761 gcaaaagcac actcaaatta tattttagcc aatgatttag aaaattattc caaacttatc
     5821 aacaaatgtt atctttctaa taaagataaa aatttaaccg agcttttaaa acattatcat
     5881 aaaattttaa cccaaaattt agaatttcaa gcaggtttta taagtgaact ctatgctcca
     5941 aagaatgagg cttgcatcca aaaagatgaa cgcgtttttt atactcttaa aaatgcttta
     6001 tatcttgata ctttaagaca aaaaatcgaa aaggaaattc ctgaagagtt aaagcatttt
     6061 tttatagcgc ctttaatcta tgaagcaagt gtgcattcaa atactagtgg agtttttaag
     6121 ggtttttata agggtagaga tggagtgggt aaatttggtg gagaggcgca aaatgcctta
     6181 aagcgtatca aaggtgatat cgagcttaaa atgcctattt tttcaaattt ttcttgtgaa
     6241 tttgaagtgg tgcaaaagga tgctaactta cttgcaaaag agcttgaaaa tatcgatgtg
     6301 gcttatcttg atcctcctta taatcaacac ccttatagtt cgaattattt tatgcttaat
     6361 ttaatcgcaa attatcaaag gcctgatgaa atttcaaaga tttctggtat accaagagat
     6421 tggaaccgaa gtatttttaa taaagaaaaa caagcagaag atgctttgtt tgagcttatc
     6481 aatgatttaa aagccaaaat cattttgctt tcttataatt gtgagggttt tgtaaagaaa
     6541 gaaaaatttc taaagcgttt gcaaagctta ggtaaatgtc aaattttaga gcaaaaatac
     6601 ccgaccttta gagcctctcg caatcttaaa aatcgttcca ttcatataca cgaacaatta
     6661 tacatactta aaaaaaaata tttaatttat taatccatca aaaggcatta aaatctagta
     6721 gcaaatctta gcgtccattg tctttgtata caaaaagctt cgtgataatt tttgagatat
     6781 atgagtattt ttgtaagagt ctatcaaatt ttataaaccc ataagtgtta ttttaagcat
     6841 tttttgtcta taattaagcc atttgaaatt cagtaaggac taggaatgag attaaaagta
     6901 ggaattttgg gagcaagcgg atatgcaggt aatgagcttg tgcgtatctt actgaatcat
     6961 cctaaagtag aaatttccta tataggttct agttcaagtg tggggcaaag ctatacgaag
     7021 ctttatccca acacgccttt aaatttaaat tttgaagata aaaatttaga tgaacttgaa
     7081 cttgatgtct tatttaccgc tactccgcat gaatttagtg ctaaactttt tagcgagtct
     7141 ttattaaaaa agatgaaaat catagattta agcgctgatt ttcgtcttaa aaatcctaaa
     7201 gattatgagc tttggtataa atttactcat cctaatcaag agcttttaaa aaatgcagtt
     7261 tatggacttt gtgagcttta tcaagaagag ataaaaaatg caaatttaat cgcaaatcct
     7321 ggttgctaca ctacttgctc tatacttagt ctttatccgc tttttaaaga aaagatgatt
     7381 gatttaaatt cggtgattat cgatgcaaaa agtggagtca gcggcgcagg aagaagtgca
     7441 aaagtagaaa atcttttttg tgaggtaaat gaaaatatca aggcttatgg attagcttca
     7501 caccgtcata cccctgaaat cgaagagcat ttaagctatg cagcaggaga gaaaatcact
     7561 ttacaattta cccctcatct agtacctatg caaaggggaa ttttaactac tgcttatgca
     7621 aatttaaaac attctgtaag tgaaaaagaa attcgtgaaa tttatcaaaa atattatcaa
     7681 gacaggaaat tcataaggct tttaccaccg cagtcgtttc cgcagactcg gtgggttaaa
     7741 tcaagcaatt ttgcggatat aaatttcagc atcgatgaac gcacaaatcg tattattgtt
     7801 ttaggtgcta ttgataattt aatcaaaggt gcagcaggac aagctgttca aaatatgaat
     7861 ttaatgtttg attttgatga agatgaagga cttaaattct ttgcaaattt gtaaaggata
     7921 aaaattgcaa gttagagcaa tgcaaaaaag tgattatgaa ggagtttaca agctttggtg
     7981 tgatatcaaa ggttttggaa ttcgatcgat tgatgatagt aaagaaaata tagaaaaatt
     8041 tttagataga aacccaaacc ttagcgcagt agctgtgatt gatcaagaaa ttgttggaag
     8101 tatactttgt gggcatgatg gtcgcacagg aggtttttat catgtgtgcg tgcataaaga
     8161 tcacagaaaa aagggtatag cccatgaaat gacaaaattt tgccttgagg cattaaaatc
     8221 tgagaagatt aacaagatcg cattgatagc ctttaagagc aatgatttgg gtaatgagtt
     8281 ttggaagcat tatggtttta ccttaagaga agatgcgaat tattatgatt tatcgctcaa
     8341 ttctcacaat caaactagtt ttaatgtttg agggtaaatc atgcaaaaat atttagaaaa
     8401 agcaaatgtc ttaatcgaag ctttgcctta tatacgcaaa ttcagctcaa aaattatact
     8461 tataaaatac ggcggctcag ctatggaaaa tgaggagctt aaacattgtg tgatgcaaga
     8521 tatagctctt ttaaagcttg taggcttaaa gcctattatc gttcatggtg ggggtaaaga
     8581 tatctccaaa atgtgcgaaa aattaggcgt aaaaagtgag tttaataacg gacttagggt
     8641 gagtgatcaa gccacaacag aagtagcaag tatggtgcta aattatatca ataaaaattt
     8701 agttcacagc ttgcaaaatt taggtgttaa agctataggg ctttgtggca aggatggggg
     8761 acttttagaa tgcgtgcaaa aggatgagaa tttaggtttt gtaggcgaga tacaaaaggt
     8821 aaattcaagt gttttgcaag atctcttaga aaaagatttt ttacccatca tagctcctat
     8881 tggaatggat gaaaatttca atacttacaa tatcaatgcc gatgatgcag cttgtgctat
     8941 tgccaaagct ttaaaggcgg aaaaacttgc tttcttaacc gatattgcag gactttatga
     9001 gaattttgaa gataaaaatt ctttaatttc taaaatttct ataacccaag caaaagcctt
     9061 ggttgacaaa attcaaggcg gtatgcatgt aaaattaaaa tcttgtatag atgcttgtga
     9121 aagtggagtt aagaaagtgc atattttaga tggacgcgtg aagcattctt tgttgcttga
     9181 attttttacc gatgagggta ttgggacttt agtgggttaa aggatgaaaa tgaattataa
     9241 agagcaaagt catattatcc ctacttataa gcgttttgat atagttttag aaagcggaga
     9301 aggggtttac cttttagatg ataagggtaa aaaatatctt gatttttcaa gtggtatagg
     9361 tgtatgtgct ttaggatata accatgctga atttaatgct aagattaaag cccaagttga
     9421 taaactttta catactagca atttatatta taatgaaaac atagcccaag cagccaagca
     9481 tttagctaaa gcgagtggct tagagcgtgt atttttcaca aattcaggag cagaaagtat
     9541 agaaggagcg atgaaagtcg ctagaaaata tgcttttaat aaaggtatca agggtggaaa
     9601 tttcatagcc tttaaacatt cttttcatgg aagaacacta ggagctttat ctttaaccgc
     9661 taatgaaaaa taccaaaaac cattcaagcc tttaatttca ggtgttaaat ttgcaaagta
     9721 taatgatttt tcaagcgtag aacgcttagt caatgaaaaa acttgcgcta ttatcttaga
     9781 aagtgtgcaa ggagaaggtg gtgtgaatcc tgctcaaaaa gatttttaca aggctttaag
     9841 aaagctttgc gatgaaaaag atatattgtt aatcgctgat gaaattcaat gcggcatggg
     9901 gcgaagtggt aaattttttg cttacgagca ttcaggaatt ttacctgatg taatgacttc
     9961 tgctaaagct ttgggatgtg ggcttagtgt cggagctttt gtagtgagcg aaaaagtagc
    10021 acaaaaatcc ttagaagcag gcgatcatgg aagtacttat ggaggaaatc ctttagtttg
    10081 tacaggtgtt aatgcggttt ttgaaatttt taagaaagaa aaaattttag aaaatgtttc
    10141 taaacttacg ccttatttag agcaaagttt ggaaaatctt atcaaagaat tcaggttttg
    10201 taaaaaaaga aaaggtttgg gttttatgca agggcttagt cttgataaaa gtgtaaaagt
    10261 agctgaggtg attaaaaaat gtcaagaaaa ttctcttttg cttatcagtt gtggggagaa
    10321 tgatttgaga tttttacccc ctttaatcat agaaaaaagc catatagatg aaatgagcga
    10381 gaagctaaga aaggttttta aaagttttga ataaattttt tattgataaa aatttattct
    10441 tttccatcta ctatgggtac aaaaagacat tcttctagaa tttctttttg taaatgagta
    10501 ccgtttttgg ttatgcgagt gataaattgt ttgccattgt gcaaaatagg ggctacaagt
    10561 atgcccccat cacttagctg atcgagtaaa atttcaggaa gttgtgtcgt ataagcagag
    10621 aataaaattc tatcataagg cgcataattt ttccatccat tttgtccatc ttcaaattta
    10681 acattaatat taaaaagctc gagttctcta aaggtttgtg ctgctttttt ggctaaattt
    10741 tctatgcgtt ctatggtaaa aacacgcctt ataaccttgc ttaaaatcgc tgcttgataa
    10801 ccacttccac agcctatttc taagacactg tccgcatctt taaaatttaa agccatagtc
    10861 attttagcca cggttaaagg agagctgatc cattgagaat tagctaaagg taaagcatca
    10921 agacgataag catgggcttt aagcggggaa aaaatttcgc gtggaatttg acaaaaagca
    10981 ttaaaaagtt cttcgttgat gaatattttt tgtgcgattt cttcggccat actttgacat
    11041 cgtttttgct caaatgcgtt cattttttct cctcgtaaat ggcaaattgt aacgaataaa
    11101 gtttcaaaat ttgattaaaa actaaaaaat ttgtttttct tattgatatt ttggttatac
    11161 taaaaataaa aaaggatgaa aatgcttatt cgatttaaag ataaatttcc aaatttgggt
    11221 caaaatgtct ttgttgcaga gggtgctaag attataggag aagtagagat aggtgatgaa
    11281 agcagtgtgt ggtttaattg tgttctaaga ggcgatgtta attttattaa aatcggtaaa
    11341 agaacaaata tacaagattt aaccactatc catgtgtggc atagagaatt taataaagat
    11401 ggaagtttaa aagatgcagg ctttcctact tgcataggag atgatgttac tatagggcat
    11461 aattgcgtga tccatgcttg caagatcggc tctcgtgtgc ttgtggggat gaatgcagtg
    11521 attatggatg atgcagctat aggagatgat agtatagtgg gtgcaggtag tgtggtaacc
    11581 aaaggcaaga aatttccacc caaatcactc atacttggaa accctgcaaa acttatacgc
    11641 gaactaagcg atgaagaagt ggcattttta aaacaatctg ctttaaatta tgttgaattt
    11701 aaaaatgatt ttttggattg atttaaaatt ttaacaacgc tgtttttatg aaaaagctca
    11761 aatttatcca ttttaaatag acaaatggag catttgagct atatcgacaa aatttcatag
    11821 agttgtgttt gtaaaatttt gtcttagctt tgttaaatct tttgaaagtt tgattttata
    11881 tttttctttg ttgttaaaat taagaaattt ctcatccagc tttgaaattt gactttttgc
    11941 atatagggca atttcttcta catttttttg tttattaaga attttaccct ctttaaaaac
    12001 acattttaaa agttcttttc tttctaaatt ttcatcaagt ttaggtaatt tttcattata
    12061 aatataaagc tcatcaaaaa gcattttttg agtgtttttg tcataaattc taaaaagttt
    12121 tttaaaatgc ggtagggtta ttttttgttt gtcttcgctg attttaattt taggcgtgat
    12181 gagtttatct tcttctatgg caacgagttt ataaacacag ccaaaaatag gatcacttga
    12241 agcagtgatg agtttttcgc ctaccccaaa agcatcaata ggtgcatcat ttttaagcag
    12301 tttgtttatg cttttttcat ctaaagaatt tgaaacgatg attttgcatt cttttaaatc
    12361 atttttatcc aagatagtac gaatttcttt gctaagtatt tctaaatttc cagaatcaat
    12421 acgcacaccg cattgtttga ttttaaattt tttaaatgct ttgactgcgt tttctagccc
    12481 ttgtttgtaa ttataagtat cgatgagtaa ggtaggattt tgaggataaa gttctaaata
    12541 atgacaaaaa gcactcaatt catcatcaaa catttgtacc caagaatgcg ccatagttcc
    12601 acttgtcata atgctataat ttttccctgc aagtgtacaa gagctagctt tgcaacctcc
    12661 tattatggcc gctcttgccc ctttgagtgc cgcctcgctt ccatgagctc ttcgcgtgcc
    12721 aaattcaagc acgctaagat ttttagctgc tcttacgata cgattggctt ttgtggcaat
    12781 taggctttga tgattgatac ttaaaagtaa gaagctttca agaatttgtg cttcaatagc
    12841 attggctttg atgatcatca agggttcgtt aggaaagatg atttcgcctt cttgcatggc
    12901 ataaatttcg cccttaaatt taaaattttt caaatatctt aaaaattctt ctttaaatat
    12961 cccttgagag tgcaaatagg ctatatcatc ttcatcaaaa tgcaaacaag atacaaagtc
    13021 taaaatatcc tcaagtcctg caaatatagc aaaagagccg tgatcgggaa tttttctaaa
    13081 aaatatatca aaataagctg ttttgttttc aaaaccattt agaaaataac cttgcatcat
    13141 ggttaattca taaaaatcac aaagcaaggt gttatttggt tttgtataag aatctttttt
    13201 cataaaagtt aatttccaag aaatttaaaa atcatcaaag cttatactac ctttagaata
    13261 gtttgtgacc ttactttcaa agaaattgct tttttgatca ttaaatttag aaaaatcatc
    13321 tacccatttg atagggtgtt ttgcattgta aattttatca agattgatag caacaagtct
    13381 ttgatctaca agatagtgga tgtattcttc tataatatcg tctgtaaaac ccatgatttg
    13441 attttgagtg atgtatttgc cccatttgat ttctaaatcg cccgcttttt taaacatatc
    13501 ataaattttg ttgatattgt tttcattaaa caaatcaggt ctttctttac gaactgaatt
    13561 gatcatattt tgaaagagta aaagatgagt gatttcatct ctttgaatga aacgaatcat
    13621 ttgagcagaa ccaagcattt tacctgctct tgcaagcgcg taaatcgcag taaatccact
    13681 ataaaaatat actccttcta aaatttgatt tgctaccatg gccaaaagaa gtttattatc
    13741 atctacatcg cccgctaatt cttcatagat acttgaaata aaatcatttt tttcgcgcaa
    13801 ggtttcatcg tgcttttcca tttcatagat taaatccgta ttatcgcaaa tggcttcaac
    13861 cattactgca taagattttg aatggttagc ttcttcataa gcttggcgtg ctaaaaccgc
    13921 attgatttca ggagcagtga tgtaaggatt gatattatca gctagattgt tggtttgaaa
    13981 gctatccata gaaatgagct gagaccaaac aagatcatac attctttttt cacctgcagt
    14041 taaattacag cgataatcta atgcatcttt agtcgtatct acttcttttg gaaaccaagt
    14101 gtttgcttcc attaaatccc ataattttaa agcccaagtg tattttgctt ttgtaaaatt
    14161 taagattcca tgaggatttc cgctaaaaac tttacgatct gttaatgttt catttgagcc
    14221 tggattataa attctttttc tttgcatttt ttacctttct ttcatatctt tgtgactatg
    14281 caagtttggg ttagaatatc gtgtaaattt agtttatctt ttcttaaaaa gcttataaat
    14341 aaaccaaaaa tcaacccaa
//
LOCUS       DBBXOW010000040        14351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.041, whole genome shotgun sequence.
ACCESSION   DBBXOW010000040 DBBXOW010000000
VERSION     DBBXOW010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14351
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.041"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..719)
                     /locus_tag="ACJE1S_001196"
     CDS             complement(<1..719)
                     /locus_tag="ACJE1S_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HGG0806747.1"
                     /translation="MLTWMQHHKKYLVVTIWISTIAFVGAGFLGWGAYDFNLNRSSSV
                     AVVGDEKINYNEFNVRYNQIFNYYNQISNGGLNEESAKQLGIENAALSSLVEDKLLLN
                     FAKDLGLGSSENEVIQALAETKAFQDPSGDFNKTIYYELLNANNMTPKEYEKTLSNEI
                     IIGKLEQIFNLPQTDEELKMLGASYFMQDSLNIAKLEQDKENIKVNEEELKKLWNEHK
                     EDYKTKKVYEISTYYLPVDMQ"
     gene            872..1807
                     /gene="rsmH"
                     /locus_tag="ACJE1S_001197"
     CDS             872..1807
                     /gene="rsmH"
                     /locus_tag="ACJE1S_001197"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HGG0806748.1"
                     /translation="MKIPHIPVLLNEVNQAFEKLNSGYFLDCTLGFGGHSESLLKDHP
                     NLKLIACDQDKEALEFSKKRLHDFKDRTEFVLSNFSQILDQISHDKLNDLKGILADIG
                     VSSYQLDNNKRGFNLHSDFLDMRMNQDAKISAFEIINNYTQEQLSDIFKKYGELNDGY
                     FIAQKICQERQKNKIKSAKELYEIIGKTKQNHRSVSKATLVFQAIRIEVNQELEVLKN
                     FLEKLEKIKLKNCILAIICFHSLEDRIVKNYFKKWAKNCICDERAFRCECGNNHSLGE
                     IISKKAITPSKEEIMINSRSSCAKMRLFHFKNMEK"
     gene            1807..2694
                     /locus_tag="ACJE1S_001198"
     CDS             1807..2694
                     /locus_tag="ACJE1S_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806749.1"
                     /translation="MLDDDFLKEKQNIRQKMLKFSRAVNQGKPLDDDLKEEISSDDIL
                     RRRFKKRSNHFLDETEEDYKLEYTKKSNIYLKEDLINVKLEEKQSLAKKIFSKIKEKN
                     KNQESKKKKTKKLFSFLKKKEIQGIQNKNTHNTQEKHLHTDKQIEIKKIQNNKIQPTQ
                     TDPKPDIKQSLENLQKKIQTQEVKIEIEKSKIQPIKTEHDEDTQKVKNVLLEGFSNAT
                     KEDKNLNFNHLLFAVLFVSFALVLFVPQIYIRNQIYYLSREIATLRVEESVLDEENKD
                     LKRRLEIMRFQNQILDYLE"
     gene            complement(2682..3173)
                     /locus_tag="ACJE1S_001199"
     CDS             complement(2682..3173)
                     /locus_tag="ACJE1S_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806750.1"
                     /translation="MKKFKDFSCNFLFKISDQPVLLRDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGIFCALVLLPLLLITHYLFTRLDFHISIISAVAVTACVFISYDIFK
                     VYARKMISKKLIQKAWALHFPYFSYEKYSIMAGNFYKEALKEEIPKANLEQYVLEKII
                     HSK"
     gene            complement(3247..4437)
                     /locus_tag="ACJE1S_001200"
     CDS             complement(3247..4437)
                     /locus_tag="ACJE1S_001200"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG0806751.1"
                     /translation="MKILVLNSGSSSIKFKFFDDKVVKASGLVEKIGEEKSKVILKNA
                     LNDETFERELPIKNHEHGLQIVNELFKESGILEDLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAFVSARAAQLLGKNKEDLNAISAHLGNGASVCAIEGG
                     KSIDTSMGFTPLEGLVMGTRCGDLDPAILPFISHLKGLTIEEIDTLLNKKSGLYGICG
                     SNDFRDIGAKIEQGDDRARLAFDMFCYRLLKYIGAYFTVLPRTDAIIFTGGIGENAAL
                     VRQKVCERLSHLGVELDIELNNKKASCERMISTANSKVKIFIVPTDEELEIARITEEL
                     INKS"
     gene            complement(4451..5956)
                     /gene="pta"
                     /locus_tag="ACJE1S_001201"
     CDS             complement(4451..5956)
                     /gene="pta"
                     /locus_tag="ACJE1S_001201"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HGG0806752.1"
                     /translation="MMANLYLMRSRSDELNTLVTTKLLKNYSKIYKNIAIYCPVIYVH
                     RIPVLQGWLEEFDIKQTLKNAYSFTFREAMEEFSKDPHSFFNTILEEYEELNRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINNEDKLIAQKYFDEALDGRDYALINE
                     NFNFEEMHKLQAYDFMTPHRFKYELIKKSVKNKKTVVLPESNDERILKAVEILLKSSV
                     VDLILLGDEQDIKQKADELALDLTAVKILNPLHSEYNEEFATLLYEARKSKGMSLEEA
                     KELVKDRTYFGTLLIHSGKADAMVSGASTTTAETIRPALQIIKTQEGVDSVSGIFFMG
                     LDDKVLAFADCAVNPNPNAEQLATSAYVSAMTAKSFGIEPRIALLSYSSGDSGKGESV
                     DLVKEALRIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGNVNVYIFPDLDAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            6058..6756
                     /gene="flgH"
                     /locus_tag="ACJE1S_001202"
     CDS             6058..6756
                     /gene="flgH"
                     /locus_tag="ACJE1S_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HGG0806753.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     TSPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGGSGLLGTAIDKVNAYSNIGFQTNSANNYQGTGTQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSRYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            complement(6840..7913)
                     /gene="ispG"
                     /locus_tag="ACJE1S_001203"
                     /gene_synonym="gcpE"
     CDS             complement(6840..7913)
                     /gene="ispG"
                     /locus_tag="ACJE1S_001203"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HGG0806754.1"
                     /translation="MEYKRFKTRQIKVGDVLIGGDAPISVQSMLFTKTRDIEGSLEQL
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVFCAEFIDGVRI
                     NPGNIGSKENVKEVVKACKERGIPIRIGVNHGSIEKEFSDKYGYGVDAMLESALYNIK
                     LLEDLDFFDIKISMKTSDTQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTIKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIKVARAILQDSGVQKSGVNIISCPTCGRIQSDLIS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ENELVDRFLAEVEDEVKSREIKE"
     gene            complement(7973..9811)
                     /locus_tag="ACJE1S_001204"
     CDS             complement(7973..9811)
                     /locus_tag="ACJE1S_001204"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HGG0806755.1"
                     /translation="MRYYELAVFGFYLQNLTFHSKEEIPALREVIIDLKNKKNLRALV
                     LKECQKPEFQTKEIKEITSFSLSCVQFELAKFISYYYSSKLGFVLGLFSTYQTYTCDL
                     IKIENEPKLSQKQKEALKFIKANPTSLLFADTGSGKTEIYICLIKQYLEQGKQVLLLM
                     PEISLTPQMQKRLEVYFKDKFFLWHSKISKKKKQENLERFCKGEALLVAGARSALFLP
                     FVNLGLVIVDEEHDNSYKASNQPYINARDLTLFLSSKFDIKVLLGSATPSLTSFYKQK
                     SFRLKGTFFESKKHFLYDENELGVTPMLLGELQKSLENQKQAIIFLPTKANFRQIVCK
                     DCGQTIKCPFCSIAMSLHKKRNVLKCHYCNYTSLIEQNCPSCQGVMLEARKMGTAELQ
                     ELLQEALPLARIAKFDSDEITSIRKLNAILKDFNENKIDILIGTSMLAKGHDYHSVDL
                     SVILGLDEYLFRPNFKASEETLALAMQVAGRAGRKGEGRVLLQTKNRNFFERYIEDYD
                     SFLQDELENRKDLYPPFKRLLRIVIEDKEQKQAQNLCKKLVDQISHILKVEIIGYGAC
                     SIEMLKGQYRFYILLRSDFYKPLIKIQEYALNFKNVSVDIDPIDFL"
     gene            complement(9808..10254)
                     /locus_tag="ACJE1S_001205"
     CDS             complement(9808..10254)
                     /locus_tag="ACJE1S_001205"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HGG0806756.1"
                     /translation="MKKAFTLLELVFVILILGILASLSFSFANQNKNDAKLLKLKIDY
                     EMLNSALSLMRTQVELKQISSFSPNLDEAKINTQKEKLFYCQTSQNCTYSLLHTPIYS
                     SFNAWMKTAPNRYRFFLNTKEWVDFFYNADFAILECLSEKYCKELL"
     gene            complement(10251..10496)
                     /locus_tag="ACJE1S_001206"
     CDS             complement(10251..10496)
                     /locus_tag="ACJE1S_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806757.1"
                     /translation="MASDNLKQVIINVSAKDFIVKCSGEFANFLEDDIALISGGTKKI
                     ELKRFVDAFVKKSYENYILERELKKLIKAINEELPVK"
     gene            complement(10486..10716)
                     /locus_tag="ACJE1S_001207"
     CDS             complement(10486..10716)
                     /locus_tag="ACJE1S_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806758.1"
                     /translation="MFDEKIINTMSDKVNELIEKYNEVCEANENLRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIFKKIEAVLGK"
     gene            10870..12843
                     /gene="uvrB"
                     /locus_tag="ACJE1S_001208"
     CDS             10870..12843
                     /gene="uvrB"
                     /locus_tag="ACJE1S_001208"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HGG0806759.1"
                     /translation="MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFI
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKI
                     VKELRKQMLEAAKALEFEKAATLRDEINKLKDL"
     gene            complement(12878..14302)
                     /locus_tag="ACJE1S_001209"
     CDS             complement(12878..14302)
                     /locus_tag="ACJE1S_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HGG0806760.1"
                     /translation="MDFLTSLDESIQFLIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNAEHKLAGFDGYINLLQITIPSTLFGVLCVGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVQLPKSNWIAMWIFLGAIALVALLGIFDSLRPNWGQV
                     VKNGIPQVDALGNPKMDILSMVSVIQMFMLLAGSLIIIFTKTDVKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKKALGDVVVDYPWTYAIMLLLISKFVNSQAAAIAA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVISSCVAGYFLALAAGYL"
BASE COUNT         5133 a         2497 c         2008 g         4713 t
ORIGIN      
        1 ttttgcatat ccaccggtag ataataagta gaaatctcat atactttttt tgtcttataa
       61 tcttctttgt gttcattcca aagcttttta agctcttctt cattaacttt tatattttct
      121 ttatcttgct ctagttttgc tatatttaaa gaatcttgca taaaataact agctcctagc
      181 attttcaact cttcatctgt ttgagggaga ttgaatattt gttctagttt gccgataata
      241 atttcatttg aaagagtttt ctcatattct tttggagtca tattgtttgc attcaaaagt
      301 tcataataaa ttgttttatt aaaatcacct gaaggatctt gaaaggcttt agtttcagca
      361 agtgcttgaa taacttcatt ttcacttgaa cctaatccca aatctttagc aaaatttaac
      421 aaaagcttat cttcaaccaa agagcttaat gcagcatttt caattcccaa ttgcttagca
      481 ctctcctcat ttaagccacc gttgctaatt tgattgtaat aattaaaaat ctgattatat
      541 cttacattaa attcattata attgattttt tcatctccaa ctacagcaac actcgaactt
      601 ctattaagat taaaatcata agcaccccaa cctaaaaacc cagctccaac aaaagctatg
      661 gtgctaatcc atatagtaac aacaagatat tttttgtgat gttgcatcca agtaagcata
      721 tcattccttg ataaaaatta aactacatat tttatcgcag aagtgtttaa ttagagttta
      781 attagtggtt ttttgttaaa tattttcatt ttgattttag ttaaaatttc gttataatta
      841 tagcttataa aaattttata ggatatagga tttgaaaatt ccacacattc ccgttttgct
      901 caatgaggta aatcaagcat ttgaaaaact aaactcagga tattttttag attgtacttt
      961 gggttttggt ggccatagcg aatccttact taaagatcat ccaaacctta aacttatagc
     1021 atgcgaccaa gacaaagaag cgcttgaatt ttctaaaaag cgtcttcatg attttaaaga
     1081 tagaacagaa tttgtattaa gtaattttag tcaaatttta gaccaaattt cacacgataa
     1141 actgaacgat ctcaaaggca ttttagctga tattggagta tcttcttatc aacttgacaa
     1201 taacaaacga ggctttaatc ttcattctga ttttttagac atgagaatga atcaagatgc
     1261 taaaatttca gcttttgaga ttattaataa ttatacccaa gagcaattga gtgatatttt
     1321 caaaaaatat ggggaattaa atgatgggta ctttatcgct caaaaaattt gccaagaaag
     1381 acaaaaaaat aaaataaaaa gtgctaaaga actttacgaa ataataggaa aaacaaaaca
     1441 aaatcacaga agtgtttcta aagcaaccct agtttttcaa gctattagaa tagaagtcaa
     1501 tcaagaactt gaagttttaa aaaatttttt agaaaaatta gaaaaaatta aattaaaaaa
     1561 ttgtattcta gctatcattt gctttcattc tttagaagat aggatagtaa aaaactattt
     1621 taaaaaatgg gctaaaaatt gtatctgtga tgaaagagct tttaggtgcg aatgtggaaa
     1681 caatcattct ttaggagaaa ttataagcaa aaaagctata actccaagca aagaagaaat
     1741 tatgattaat tctcgttcaa gttgtgcaaa aatgcgcctg tttcatttta aaaatatgga
     1801 aaaataatgc tagatgatga ttttttaaaa gaaaagcaaa acatacgcca gaaaatgctt
     1861 aaattttctc gcgctgttaa tcaaggtaag cctttagatg atgatttaaa agaagaaatc
     1921 tctagtgatg atattttaag acgccgcttt aaaaaacgct caaatcattt cttggatgaa
     1981 acagaagaag actataagtt agaatataca aaaaaatcaa atatatactt aaaagaagat
     2041 ttgataaatg ttaaattgga agaaaagcag tctttagcta aaaaaatttt ttccaaaata
     2101 aaagaaaaaa acaaaaatca agaatcaaaa aagaaaaaaa caaaaaaact tttttctttt
     2161 ctgaaaaaaa aagaaattca aggtatacaa aataaaaaca cacacaatac tcaagaaaaa
     2221 catttgcata cagacaagca aatagaaatc aaaaaaatac aaaataacaa gattcaaccc
     2281 acgcaaactg acccaaaacc cgatataaaa caaagtctag aaaatttaca aaaaaaaata
     2341 caaactcaag aagtaaaaat agagattgaa aaatccaaaa ttcaacccat taaaacagaa
     2401 catgatgaag atacacaaaa ggttaaaaat gtattactag aaggatttag taatgctact
     2461 aaagaagata aaaatctcaa tttcaatcac ttactttttg ccgtattatt tgtcagcttt
     2521 gctcttgttt tatttgtacc acaaatttat ataagaaatc aaatttacta tcttagccga
     2581 gaaattgcca ctttaagagt agaagaaagc gtacttgatg aagaaaataa agatttaaaa
     2641 agacgcttag aaatcatgcg ctttcaaaat caaattttag attatttaga atgaatgatt
     2701 ttttctaaaa catattgttc taaatttgcc tttggaattt cttcttttaa ggcttcttta
     2761 taaaaatttc cagccataat agaatatttt tcatatgaaa aataaggaaa gtgcaaagcc
     2821 catgcttttt gtattaattt ttttgaaatc attttacgag cataaacctt aaaaatatca
     2881 taagaaataa aaacacatgc ggtaaccgct acagcgctga taatactgat atgaaaatca
     2941 aggcgagtaa aaagataatg cgtaatgagt aataatggta ataaaaccaa agcacaaaaa
     3001 attccaaaat atatataaga atttaaaatt ttaaaattaa aattaagctt ggaaggatcc
     3061 acaagcattc catcattaaa caaagcatta gcctcaagca aatcacgcaa aagaacaggt
     3121 tgatcggata tcttaaaaag aaaattacaa ctaaaatctt taaatttttt catattttta
     3181 cacttttaaa tttttagttt aaaatactat ctaaagaaaa ttaaatttgg gttaaaacaa
     3241 aagctcttag cttttgttta tcaactcttc tgtgattctg gcaatctcaa gttcttcatc
     3301 tgtaggaacg ataaaaatct ttaccttaga attggcagta ctaatcattc tttcacagct
     3361 tgcttttttg ttgtttaatt ctatatcaag ctcaacacca agatgagata atctttcaca
     3421 aactttttgg cgaactaaag cagcattttc acctataccg cctgtaaaaa taatagcgtc
     3481 agttctaggt aaaaccgtaa aataagcccc tatatatttt aaaaggcgat aacaaaacat
     3541 atcaaaagct aaacgtgccc tatcatcacc ttgctcgatt tttgctccta tatctctaaa
     3601 atcgttagaa ccgcaaattc cataaagtcc gcttttttta ttaagcaaag tatcaatttc
     3661 ttctattgtt aaacccttaa gatggctaat aaatggcaaa attgcagggt ctaaatcacc
     3721 acagcgagtt cccataacaa gaccttcaag aggagtaaaa cccatggaag tgtctatact
     3781 tttacctccc tcaatagcac aaacactcgc accatttcca agatgtgctg aaattgcgtt
     3841 taaatcctct ttattttttc caagtaattg ggctgcccta gcactcacaa aagcgtgaga
     3901 agtaccatgg aaaccatatc ttcttatatt gtgcttatca taaaaatcat aaggcaaagc
     3961 atacatataa gcaaaatcag gcatagtgcg atgaaaagct gtatcaaaaa tagctgcatt
     4021 agcaacacta ggtgcagctt tgatcattgt ttttatacct gctaaatgcg caggattatg
     4081 caaaggagca aaaatactaa ccctatctat ctctttaaga acataatcat ccactaaaca
     4141 atgctcgctt aaatttcttc ctccatgcac tatgcgatga ccacagccat ctaaagcatt
     4201 taaatcttcc aaaattccag attctttaaa aagctcgttg acaatttgca atccatgttc
     4261 gtgatttttt ataggaagtt ctctttcgaa tgtttcatca tttaaggcat tttttagtat
     4321 gacttttgat ttttcttctc caattttttc taccaaacca ctggctttaa ccactttatc
     4381 atcaaaaaat ttaaatttaa tagatgaaga gcctgaattt aaaactaaaa tcttcattca
     4441 ctttcctttc ttattgtgct tgtatagcac ttaaaataac cgtatctact atatcatcaa
     4501 ccaaacatcc acgacttaaa tcatttacag gttttttaag tccttgcaaa ataggaccga
     4561 ttgccaaagc atttgctgtt ctttgcacag ccttatagca aatatttgca gcgtcaagat
     4621 caggaaagat atatacattt acattacctg ctatcttaga atttggcatt tttttagcag
     4681 cagttttagg atcataagca caatcaaatt gcatagggcc atcgatattt aattctggat
     4741 atttttcttt agcaattctt aaagcttctt taacaagatc tacactctca cccttaccgc
     4801 tatctccact agaataagaa agcaaagcta tccttggctc gataccaaaa gactttgcag
     4861 tcatagcact tacataagca ctagtggcga gttgctcggc atttggattt ggatttacag
     4921 cacagtctgc aaaagctaaa accttatcat caagccccat aaagaaaatt cccgaaacag
     4981 agtcaacacc ctcttgagtt ttgataatct gaagcgcagg acgaatagtt tcagctgtcg
     5041 tagtagatgc tccacttacc atagcatcag ctttcccact atgtatcaac aaggttccaa
     5101 aataagtcct atctttaacc aattctttag cctcttcaag gctcattcct ttagattttc
     5161 ttgcttcata taacaaagtg gcaaattctt cgttatattc tgaatgaagc ggattgagta
     5221 tttttactgc ggttaaatca agtgccaatt catcggcttt ttgtttgata tcttgctcat
     5281 cacccaataa aataagatcc actacactac ttttaagtaa aatttcaact gcttttaaaa
     5341 ttctttcatc attgctttct ggtaaaacaa cggttttttt atttttaaca ctttttttaa
     5401 tgagttcata tttaaaacga tgcggagtca taaaatcata agcttgcaac ttatgcattt
     5461 cttcaaaatt aaaattttca ttaatcaaag cataatctct accatctaaa gcttcatcaa
     5521 aatatttttg agctattaat ttatcctcat tattaataat agccgctata ggagtgttaa
     5581 gatttttagc caattttata ctcaaatcaa aaccatcaag tattccaaat tcgcaaaaac
     5641 tattaacaag aacaaaatca tatttacgat ttaattcctc atactcttct aagatagtat
     5701 tgaaaaaact atgcggatct ttgctaaatt cttccatagc ttctctaaaa gtaaaactat
     5761 aagcattttt caaagtttgc ttaatatcaa attcctcaag ccatccttgc aaaacaggga
     5821 tacgatgtac ataaatcaca ggacagtaaa tagctatatt tttatatatc ttgctatagt
     5881 ttttcaataa tttcgtggtg actaatgtat ttaactcatc actcctagat ctcatcaaat
     5941 aaagatttgc cattattttc tccttggttt taaaaagtgg aacactcttt gctttatact
     6001 tatttgaaaa actattttaa caaataaaaa tgaaatttca tcatttaaag gacgaaaatg
     6061 aaaaaagttt tattctatgt gttacctttt gcattttttg gatgttctgc aacagtagat
     6121 ccgcaaattt ctatgaaacc tcctgcttat gtagaagagc ttgcacctaa acaaagcaac
     6181 aatgtagaaa cttctcctgg atcgcttttt ggaaaaggcg ataatccttt attctctgat
     6241 aaaaaagcaa tgaatgtaaa tgatttagtt actgtggtta tccaagaaag cactactcaa
     6301 agcactcaag ccaataaggc cacaagtaga accaatactt ccaatttagg aggaggagct
     6361 ttaacaggtg gaagtggctt acttggaact gcgatcgata aagtaaatgc ttattctaat
     6421 ataggctttc aaaccaatag tgctaacaac taccaaggaa caggcactca aagtcgcaat
     6481 gaaagtttta acactacgat ttcaactcgc gtgattaaaa ttttgtctaa tggtaattat
     6541 tttattgagg gttcaagaga gcttttgatc aatggagaaa aacaaatcat acaacttagc
     6601 ggtgtgattc gtccttatga tatcggtcaa gataatacta tagatagtag atatatagca
     6661 gatgcaaaaa ttctttacaa aactgaaggt gaagtggata gaagcactag aaaaccttgg
     6721 ggaagcaaag tcatagaagc tatatggcct ttttaaataa acttataatt taagtcctta
     6781 aaataaggac ttaaatttta ttgcgatttt attttaaata tctataatta aaataaaatc
     6841 tattctttta tctctctact cttaacctca tcttctactt cagctaaaaa tctatccaca
     6901 agctcgtttt ctttgagttt tgccaccact tctccatgtc ttataacaag tccttgattt
     6961 tttccaaaag ctatagccac atcagcgccc ttagcctcac ccaaagcatt tacaacacag
     7021 cccataacac tgatatttaa aggctctttg atatgtttag tcttttcttc tacgatttta
     7081 atagcactga ttaaatcact ttgaattctt ccacaagttg gacatgagat aatgtttact
     7141 ccactttttt gcaccccgct atcttgtaaa atcgctcttg cgactttgat ttcttcttca
     7201 agttcgcccg tcattgaaac cctcatggta tcacctatgc ctttaagaag caaatttcct
     7261 aaagcaatag aactttttat cgtgctatga aatttagtcc ctgcctctgt tactcccaaa
     7321 tgaaaaggat aatcacaaag tggtcttaat ctttcataag cctctatggt cttttgagta
     7381 tcagaagttt tcatcgaaat ttttatatca aaaaaatcca aatcctctaa aagtttaatg
     7441 ttatacaatg cactttctaa catcgcatct acaccatatc catatttatc actaaattct
     7501 ttttctatag agccgtgatt tacacctatg cgtataggaa tgcctcgctc tttacaagct
     7561 tttactactt ctttaacatt ttcttttgag cctatattgc ctggatttat acgaacccca
     7621 tcaataaatt cagcacaaaa tacagctaaa ttgtgattaa aatgtatatc tacaattaaa
     7681 ggcaagggac tttttgcttt aatctccttt aaagcccttg catccgccat atccaaacac
     7741 gccaaacgca cgatattagc tcctgcaaaa taaagccgat tgagttgctc taaagaacct
     7801 tcaatatctc ttgttttggt aaagagcata gattgcactg aaataggcgc atcgccacct
     7861 attaaaacat cacccacttt aatttgtctt gttttaaatc ttttgtattc cattttcaag
     7921 cttcttttta taaataattt ttaaaattct agctattttt tgctttaatt cctcataaaa
     7981 aatcaatagg atctatatct acgctaacat ttttaaaatt taaggcatat tcttgtatct
     8041 tgattaaagg tttgtaaaaa tcgctacgaa gcaatatata aaaacgatat tgtcctttga
     8101 gcatttctat actacaagct ccatagccta taatttcaac ttttaaaatg tggctaattt
     8161 gatcaactaa ttttttgcac aaattttgag cttgcttttg ttctttatcc tcgataacaa
     8221 ttctcaaaag gcgtttaaaa ggaggataaa gatcttttct attttctaat tcatcttgca
     8281 aaaagctatc ataatcctct atatatcttt caaaaaaatt cctattttta gtttgcaaaa
     8341 gcacccttcc ctcacctttg cgtcctgctc ttcctgccac ttgcatagcc aaagccaaag
     8401 tttcttcgct tgccttaaaa ttgggacgaa acaaatactc atcaagtcct aaaataacgc
     8461 ttaaatctac actatgataa tcatgtcctt tagcaagcat ggaagttcct ataagtatat
     8521 cgatcttatt ttcattaaaa tcttttaaaa tagcattaag ctttcgaata ctcgtaatct
     8581 catcactatc aaatttagct atccttgcta aaggcaaagc ctcttgcaaa agttcttgta
     8641 attctgctgt gcccatcttc ctagcctcta gcatcacacc ttgacagcta ggacaatttt
     8701 gctctattaa agaagtgtaa ttacaataat gacattttaa aacatttctt tttttgtgca
     8761 aactcatagc aatagagcaa aaaggacatt ttatagtttg cccacaatct ttacacacaa
     8821 tttgtctaaa attggcctta gtgggcaaaa aaatgatagc ttgtttttga ttttccaagc
     8881 ttttttgcaa ctcgcccaaa agcataggag ttacgcccaa ttcgttttca tcatataaaa
     8941 agtgtttttt actttcaaaa aaagtaccct taagtctaaa actcttttgc ttgtaaaaac
     9001 tcgttaaaga aggagtagca gaacctaaaa gcaccttaat gtcaaatttt gagcttaaaa
     9061 aaagtgttaa atccctagca ttaatataag gttgattaga cgctttgtaa gaattatcat
     9121 gttcttcatc cactataaca agccctaaat ttacaaaagg caaaaacaaa gccgatcttg
     9181 ctcctgcgac caaaagtgct tcacccttac aaaaacgctc taaattttct tgcttttttt
     9241 tctttgaaat tttagaatgc catagaaaaa atttatcttt aaaatacact tctaaacgct
     9301 tttgcatctg tggagtaaga gaaatttctg gcattaaaag taaaacttgt tttccttgct
     9361 ctaaatattg ttttattaag caaatataaa tttcagtttt tccactacct gtatctgcaa
     9421 aaagcaaaga agtgggatta gcttttataa atttcaaagc ttctttttgt ttttggctta
     9481 atttgggttc attttctatt ttaatcagat cacaagtgta agtttgataa gtagaaaaaa
     9541 gtcctaatac aaaacctagc tttgaagaat aataatacga aataaatttc gccaattcaa
     9601 attgtacaca gcttaatgaa aaagatgtaa tttctttaat ctcttttgtc tgaaattcgg
     9661 gcttttggca ttctttcaat actaaagctc taagattttt tttatttttt aaatcaataa
     9721 tcacctctct taaagctgga atttcttcct tgctatgaaa ggttaaattt tgcaaataaa
     9781 atccaaaaac cgctaattca taatatctca taataattct ttacaatatt tttcactcaa
     9841 acattctaaa atagcaaaat cagcattata aaaaaaatca acccattctt ttgtatttaa
     9901 aaaaaatcta tatcgattgg gtgctgtttt catccaagca ttaaaactag aataaatagg
     9961 tgtatgaagc aaagaatagg tgcaattttg actagtttgg cagtaaaaaa gtttttcttt
    10021 ttgagtgttg atttttgctt catcaagatt aggagaaaaa gaactgattt gtttgagttc
    10081 aacttgagta cgcataaggg atagggctga atttagcatt tcataatcta ttttcaattt
    10141 taataatttc gcatcgtttt tattttgatt ggcaaaagag aagcttaaac ttgccaatat
    10201 ccccaaaatc aatatcacaa aaacaagctc taagagagta aaagcctttt tcattttaca
    10261 gggagttctt cattgatcgc ttttataagt tttttaagtt ctctttctaa gatataattc
    10321 tcatagcttt tttttacaaa agcatcgacg aaacgcttta attctatttt tttagtccca
    10381 ccagaaataa gagcaatatc atcttctaaa aaatttgcaa attctccact gcatttaaca
    10441 atgaaatcct ttgcagaaac attgataata acttgtttta aattatcact tgccaagtac
    10501 agcctctatt tttttgaaaa tatcttcact ttctatattg cgagacttaa gctcttcttc
    10561 caaacgcatg atttgattac tctttgcttc attttgcgct tttacgctta caagttcgtt
    10621 tcttaaattt tcatttgctt cgcacacttc gttgtatttt tcaatcaact cattgacttt
    10681 atctgacatt gtgttaataa ttttttcatc aaacataaat ttgccttctg ctatagaaat
    10741 ttaaaataaa aatatttttt gtaattgtag cagaaaaaaa tttaaattta ggttttttat
    10801 agtcaattaa tttttaatta aagcattttc ttttagaatt tttctaaaaa actttcaaaa
    10861 agtgggaaaa tgttagaact tacaagcgat tttaaaccaa gtcctgatca agaacaagca
    10921 atacaaggta ttgtcaaaag cataaaaaaa ggtaataaat atcaaaccct actcggcgta
    10981 acaggaagcg gaaagacttt taccatggca aatgtcataa aagaactcaa tatgccaacc
    11041 cttatcatga gtcataacaa aagcctttgc gcccagcttt atagcgaatt taaaggtttt
    11101 ttttctaaga accatgtgga atattttatt tcttattatg attattatca gcctgaagct
    11161 tatataccgc gcaccgatgt ttttatagaa aaagatagct ccacaaatga ggatctagaa
    11221 cgcttaagac ttagcgcaac tgcttcgctt ttaagctatg aggatgtggt ttgtatcgct
    11281 agtgtctcgg ctaattatgg acttggaaat ccaaatgaat acataggaat ggttttaatc
    11341 tttgaactag acatgcaaat ttcacaaaaa gaacttttaa agaaacttgt agacatgggt
    11401 tataaaagaa atgataattt ctttgatcgt gctgattttc gcgtacaagg tgatattata
    11461 gatatttatc ctgcttatta cgaagatgaa gtagtaagac ttgaattttt tggtgatgaa
    11521 ctggatgcaa tgtatcatta taatgtttta gaaaataaaa aaggcaaaga tttaaaacgc
    11581 ttcatacttt atcctacaag ccagtttagt gtaggtgaaa caagactaaa acaagcgata
    11641 aaagacataa aagcagaact taacgaacgc cttgcttatt ttgaacatga aaataaactc
    11701 gtagaatatc aacgccttaa acaaagggtt gaatttgatc ttgaaatgct tacaagcaca
    11761 ggaatgtgta aaggcgttga aaattatgca agacatttaa cagggcttaa agaaggtgat
    11821 actccttata cgctttttga ttattttgcg attaaaaata ggaaatttct tgttatagtc
    11881 gatgaaagcc atgtttcttt accacaattt agaggtatgt ttgcaggaga tagaagtaga
    11941 aagcaaactt tagtagatta tggttttcgt cttccatcag ctcttgataa tcgtccttta
    12001 atgtttgatg aatttatcca taaagattgt cagtttcttt ttatttcagc cacccctgcc
    12061 ccgcttgagc ttgaacttag caaggaaaat atctttcatc aaattatgcg tccaacagga
    12121 ttacttgatc ctttgataga acttaaagat agcgataatc aagttgaaat tttatttgat
    12181 gaagccaaaa aagttataca aagaaacgaa cgcgttttag ttactgtgtt gactaaaaaa
    12241 ctagctgaag agcttacaag gtattattta gaacttggta ttaaagtaaa atacatgcat
    12301 tcagatattg atgcaataga acgcaatgaa atcataagag gcttaagaag cggtgctttt
    12361 gatatgttaa taggtataaa tttacttaga gaaggacttg atttgcctga ggtttcgctt
    12421 attgccatta tggacgcaga taaggagggt tttttaagaa gcactacaag tttaatccaa
    12481 accatgggaa gagctgctag aaatgtcaat ggtaaagttt tactcttttg caaaaagatt
    12541 acaaaatcca tgcaagaagc tatggatact acaaatgagc gtcgcaaact tcaagaagct
    12601 tacaatcaaa aacataacat caccccaact tcagtcaagc gacacatcga agaaagttta
    12661 aaaaatgaag aaaacttagg agaaatttat cgcaaaggta aaaaatttga aaaaatgcct
    12721 gctaatgaaa gagctaaaat cgtaaaagag cttcgtaaac aaatgcttga agctgctaaa
    12781 gcgctcgaat ttgaaaaagc agcgacttta agagatgaga tcaataaatt aaaagattta
    12841 tagtattttt attttgcagg aaaaatcctg caaaatatta aagatatcct gctgctaaag
    12901 ctaagaaata tcccgcaaca caagaactaa tcacacctat aagacctggt aaaataaaac
    12961 tatgattgat aacaaattta cctatatgag tcgtacccga tctatcaaat tgtatagtcg
    13021 ctaagtcact tggataagtt ggtaaaatat aatacccata gcaagctgcc gcaaaagcca
    13081 caatcacacc tggttcaaca cctattccta aggccaaagg aacaaaagct gcaatagctg
    13141 ctgcttgaga gtttacaaat tttgaaataa gtaaaagcat gattgcataa gtccaaggat
    13201 aatctacaac tacatctcca agagcttttt tcatcatagg agtatgaaca gcaaacatag
    13261 tatcagccat ccaagaaatt ccaaaaactg caacaagagc tatcataccg gatttaaaaa
    13321 tctcatttga gccgattttt tttacatctg ttttagtaaa gataataatc aaagaacctg
    13381 ctaaaagcat gaacatttga atcactgaaa ccatagataa aatatccatt ttaggattgc
    13441 ctaaagcatc tacttgagga ataccatttt ttacaacttg tccccaattt gggcgtaaag
    13501 aatcaaatat acctaataaa gccactaaag caatagctcc taagaaaatc cacattgcaa
    13561 tccaattgct ttttggaagt tgaacaccta aaagtgtttt agaatcacca taaacatatt
    13621 ttttaaattc aggatcttta agtttttctt gaaaaacctc atctttatcc aaatcttttc
    13681 ctctaaacca agaaaaaatt cccacacata aaacaccaaa aagcgtacta ggtatagtaa
    13741 tttgaagaag attgatatag ccatcaaaac ctgctaattt atgttctgca tttaaaagca
    13801 aagctgttaa actcacaact gcaacagaaa caggacttgc aataataccc atttgtgaag
    13861 atatagaagc tgctgccata gggcgttctg gacgaattcc atttttaatc gctatgtcat
    13921 aaataatagg cataatagta taaaccacat gtcctgtccc acaaagtatg gttaaaaagc
    13981 aagttacaaa gggagctaaa atggttaaga atttaggatt gcgtcttaaa attctttcag
    14041 ctatttgaag cattacatca agaccgccac ttgcttgtaa agtcgcactt gcaacaacca
    14101 cagctaagat agtaagcatt acatctatag cgggctttcc aggttttata tgaaaagcaa
    14161 aaacaagcat taaaatacct ataccaccga gtaagccaag agctatacca cctttttttg
    14221 caccgtaaaa aagacaaatt aaaacaatga tgatttgtat caaaaactga atactctcat
    14281 ctagactcgt taaaaagtcc attttaactc cttttatgga ataaatttaa aaattattgt
    14341 gattataaca c
//
LOCUS       DBBXOW010000041        14302 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.042, whole genome shotgun sequence.
ACCESSION   DBBXOW010000041 DBBXOW010000000
VERSION     DBBXOW010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14302
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.042"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            27..2057
                     /locus_tag="ACJE1S_001210"
     CDS             27..2057
                     /locus_tag="ACJE1S_001210"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HGG0806761.1"
                     /translation="MPLSRLNEEQYLAATANFGHNLIIASAGTGKTSTIVARISYLLS
                     QGVSPQKIMLLTFTNKASKEMISRLGKYFDKNITGKILAGTFHSTAYTLLKSANKDVV
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDIYSLFQNKAYDQDFYHWFCVNY
                     EDQSIYAEIYEDILKEYSEEKKRFNYVDFNDLLLNLKTLLNEKKYEFDEILVDEYQDT
                     NALQSSLIEAFESKSLFCVGDYDQSIYAFNGADINIIGGFKQRFKDAQIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRKDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGIEVALREQGIASVRKGSGSFFESLEVKAFSAMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGSLIRGFLEPDKSVNLQNHQKRNYQLG
                     LFAGLEELASENRFKFESEFNAHPILKLSKINDLCAKNLEKIYFFLKKAMETKHSLAL
                     VNLICENSFYKEICEELAIKRATNKAGQVDLLRKKENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSNGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMSMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTAFTPSRFLIEAGLCKGELTID"
     gene            2113..2844
                     /locus_tag="ACJE1S_001211"
                     /pseudo
     CDS             2113..2844
                     /locus_tag="ACJE1S_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814911.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
     gene            2953..3480
                     /gene="tpx"
                     /locus_tag="ACJE1S_001212"
     CDS             2953..3480
                     /gene="tpx"
                     /locus_tag="ACJE1S_001212"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HGG0806762.1"
                     /translation="MSSVNFKGNPVKLKGNSVEVGADAPKVGLKAKDLSTIEIGAAGK
                     TQIVLSLPSLDTPVCATEAREFNKKVASYNGAEVVVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLIGEGPLEGLLARAVFVIKDGKIAYKELVSEVTEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            3749..6523
                     /gene="napA"
                     /locus_tag="ACJE1S_001213"
     CDS             3749..6523
                     /gene="napA"
                     /locus_tag="ACJE1S_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_process: GO:0042126 - nitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HGG0806763.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPRPVFGAQEEEWKWDKAVCRF
                     CGTGCGIMIARKDGKIVAIKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMND
                     KGEFDKKGKFKQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKIVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDKKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVAKENAITLDEEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFEEFKKGLAPYTLEYTAKVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLG
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWITAARDMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DGKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKNFTSNDAVMKDYDNSEVKGDERK
                     IQGSDGKEFKGYGFFVQKYLWEEYRKFGLGHGHDLADFNTYHQVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGEFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPNEEYPFWLSTGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            6541..7281
                     /gene="napG"
                     /locus_tag="ACJE1S_001214"
     CDS             6541..7281
                     /gene="napG"
                     /locus_tag="ACJE1S_001214"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HGG0806764.1"
                     /translation="MKDRREFFASAFKGLCLCTAGGFLANLSLKADDDYALRPPGAED
                     EARFLSKCIRCGLCVKACPYNTLKLATLLDSAKNGTPFFKAREIPCYLCKDIPCIKEC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDQE
                     DEDRIKDADTSKYFDAKKATNYLNEGEF"
     gene            7278..8063
                     /gene="napH"
                     /locus_tag="ACJE1S_001215"
     CDS             7278..8063
                     /gene="napH"
                     /locus_tag="ACJE1S_001215"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HGG0806765.1"
                     /translation="MMRYLIARRIVQIGILALFSFKATDFILKGNLSSSRLFDTLPLS
                     DPFAVIQIYLASFSIDLMALMGALIVLILYGVFLGRAFCAWVCPVNLITDFAAFVRSK
                     MAFKQSKVLILSKNLRYYILALSLILSFVLSLPVFESMSYIGIIHRGIIFGTTSWIFI
                     AFILFCIDAFLSPRAICSHLCPLGAFYALISRFALLKIKHNHQKCTKCYKCIGICPEK
                     QVLWMIAKESASVNSGECIRCGRCVEVCNDDALNFNIFDLRKK"
     gene            8060..8584
                     /locus_tag="ACJE1S_001216"
     CDS             8060..8584
                     /locus_tag="ACJE1S_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HGG0806766.1"
                     /translation="MMKKKTILLGSVAIMFLAACALNSGVSSEQIGLRKASLENENKV
                     ALVDASFTALQPGESVLFERSFENAPPLISHTIEDMLPITKDNNTCLSCHDKAIATDV
                     GATPLPASHYYDFRTNKTTGDAISDSRFNCTQCHVPQSDAKPLVGNSFKAEFKNEGLK
                     NRSNLIDVINEGVE"
     gene            8589..9509
                     /locus_tag="ACJE1S_001217"
     CDS             8589..9509
                     /locus_tag="ACJE1S_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HGG0806767.1"
                     /translation="MKKILFILSFLYILSPAYELKLNSNITALKLDQQELYIGTDKGE
                     IYEYNLKDKSLKELLSLPKIKNYYEGDFARIYNIDVYQNSLLILSEGDFGAKNLSLYN
                     NNLQIQTLQESSVKEAFFIDENTYLLVLLGSKIELVDKDLKRINEFKFSHSSLNDAAL
                     NEEKTKFIAGFESGEVELFDLKSWKILKNYDKMHKDNIYQVDFKNDILISCGTDRRIG
                     LVKNEEQTFLQKDFLIYTCALSPSGKLAAYSDNEEGFNEVFDTNTLKTVRIFKDENLM
                     SEIIIFINERELIISGFGDKIVFRSLDESF"
     gene            9496..9831
                     /locus_tag="ACJE1S_001218"
     CDS             9496..9831
                     /locus_tag="ACJE1S_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HGG0806768.1"
                     /translation="MNLSSVLIVAKVQHIDELKKEILKIPSCSIELCENEKIIVVIES
                     ESLEKELESYKMLEKLPHIISINMVFSYQDLDKDIQKAINSGAIQTIEKNENAENIRY
                     YGSIYNQMS"
     gene            9845..10021
                     /locus_tag="ACJE1S_001219"
     CDS             9845..10021
                     /locus_tag="ACJE1S_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806769.1"
                     /translation="MVFLIPLLIIIAIIFGIDYLYFNDENVKVKEERQIHKSDPNLDK
                     QREEYLKHLFKEKK"
     gene            10018..10698
                     /locus_tag="ACJE1S_001220"
     CDS             10018..10698
                     /locus_tag="ACJE1S_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HGG0806770.1"
                     /translation="MKQRELFLLTIPVLMGYIPLGAAFGILAASKDFSLFEILLSSIF
                     IYAGAGQFLLVALVAQNVSFLMIFFTLFLLNFRHFFYTLSLLKELKSINFLRHYIIFA
                     LTDESFALLSSIKEKIKNLSRAQRSLIMFEVCLLNQIYWVIGSVLGYYFKQGLNIDYS
                     GVEFSLNALFIVLAYELYKQNPNLKILLYSSFVALFALFCIDKPYMLAFCIFIALMIL
                     IFGKKYVR"
     gene            10688..11008
                     /locus_tag="ACJE1S_001221"
     CDS             10688..11008
                     /locus_tag="ACJE1S_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter permease"
                     /protein_id="HGG0806771.1"
                     /translation="MLDKNILYAILAASLATYLTRVLAFILFKNKKENYHLLFVQYNM
                     PLVIIIILFFYTFYEVDFYSYPYGLDFIVSCILVFLIHLLFKNALLSIILGTIFYMFV
                     LRLF"
     gene            11008..11589
                     /locus_tag="ACJE1S_001222"
     CDS             11008..11589
                     /locus_tag="ACJE1S_001222"
                     /inference="COORDINATES: protein motif:HMM:NF013933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HGG0806772.1"
                     /translation="MDYTLFILTFVSVSLLPGLCMSLAFSLGLSLGYKNTLWMIFGEL
                     VGLALVVLCCALGIEFILRYENLFKFFQIAGALYLLYIAFILFKSKSQITQEKIIHKK
                     KFSLIIQGFIASSSNPKAWIFMFSILPSFLKFQVNVNILLLIILLIEFCSLSLYALGG
                     SIFKIFMNKHLDKINKISALFIFAMALSVLYKV"
     gene            11634..11882
                     /locus_tag="ACJE1S_001223"
     CDS             11634..11882
                     /locus_tag="ACJE1S_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HGG0806773.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPNNQNAIDAVRR
                     LSGFRSKHQDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            11879..12376
                     /locus_tag="ACJE1S_001224"
     CDS             11879..12376
                     /locus_tag="ACJE1S_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HGG0806774.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQSEILKEQEELRKTQIQEDMP
                     TVKLKEEPILEQELEDKISMAKFEEEQKIQEEIKNLDELNQENKEPVKEEAVLQSEIL
                     NPSIIAEVQTLNEDIFLKHLRERILVLFEGLNSVKEENLEHRLQLTINFLEFLLANIE
                     DKLKK"
     gene            12345..13460
                     /locus_tag="ACJE1S_001225"
     CDS             12345..13460
                     /locus_tag="ACJE1S_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HGG0806775.1"
                     /translation="MQTSKISLKNNADLKFVIDFLSPYTQRAYLVGGSVRDLFLGLEI
                     YDYDIELYDITPSDFEKMMKKLGAQGFGKSFFVYKFKNYDFALARTENKTGYGHTGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLEQGILRHIDQTSFQEDSL
                     RILRAVAFASRFDFKIADESLKLMQSMNIKDLSRDRINAELYKFFKSSKLEVGYKYLQ
                     ELNMEKEIFGFDSAFKSMEFQALLRKSREVVKDDALFLYLYLNFFNLNKEEFFKKSKI
                     KKEYFKKANQAFYLDEMSDFDLASIALDMPLKEWLGLWDKERIKWAKKFKLYENKFKT
                     SILAKDFLDAGIYGKMLGLKLKEARENELYEYIKRLN"
     gene            13461..14285
                     /gene="purU"
                     /locus_tag="ACJE1S_001226"
     CDS             13461..14285
                     /gene="purU"
                     /locus_tag="ACJE1S_001226"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HGG0806776.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEEMFFF
                     RAILEGEFDKKAFVGTLEAMLGEEAYIELCEKRKKDIIVFATKESHCLGDLLIKYYSN
                     ELEANIKAVISNHDTLKNLVEKFEIPYHCISAENLKREEQEKQVLECLKEYQFDYLVL
                     AKYMRILSPDFVKHFEGKIVNIHHSFLPAFVGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVSHEYTWQDMQQAGRNVEKNVLSKALDLVFDDRIFIHKNKTIVF"
BASE COUNT         4908 a         1750 c         2789 g         4855 t
ORIGIN      
        1 ataattcgtg ctttttaagg aaaaaaatgc cactttctag attaaatgaa gagcagtatt
       61 tagctgctac tgcaaatttt ggacacaatc tgatcatagc aagcgcgggg acgggaaaaa
      121 cttctaccat agttgcaaga atttcttatc ttttaagcca aggtgtatcg ccgcaaaaaa
      181 tcatgctttt gacttttact aataaagcca gtaaagaaat gataagccgt ttggggaaat
      241 attttgacaa aaatattaca ggaaaaattt tagcaggaac ttttcatagc acagcctata
      301 ccttgcttaa aagcgcaaat aaagatgtgg ttttaaaaca ggccagtgag ttaaaaaccc
      361 tacttaaaag tgtttatgaa aaaagaacct ttagacattt aagtgatata aaaccttatc
      421 agtcaagcta tttatatgat atatattctt tatttcaaaa caaggcttat gatcaagatt
      481 tttaccattg gttttgcgta aattatgaag atcaaagtat ttatgcagaa atttatgaag
      541 atatattaaa agaatacagt gaagaaaaaa agcgttttaa ttatgtagat tttaacgatt
      601 tacttttgaa tttaaaaact cttttaaatg aaaaaaaata cgaatttgat gaaattttgg
      661 tagatgaata tcaagatact aatgcgcttc agagttcttt aatcgaggct tttgagagta
      721 agagcttatt ttgtgtgggg gattatgatc aaagtattta tgcttttaat ggtgcagata
      781 ttaacataat aggtggattt aagcagcgtt ttaaggatgc tcaaattttt tctctaaaca
      841 aaaactaccg ttcttcaaga agtattctag ctttggcaaa taaggtaatt ttaaacaacg
      901 aaagactcta tccaaaggag cttatagtta caagaaaaga tgaatttaaa gccccttctt
      961 tactgacttt tgaagaattg tttgatcaat atcaaaatat agccaaaatg atacttacta
     1021 gcggagtgag cttggaagaa attgctgtta tttttcgcaa taattcgagt gcagatggta
     1081 tcgaggtggc cttaagagag caggggatcg caagtgtgag aaaaggcagc gggagttttt
     1141 ttgaaagctt ggaggttaaa gcctttagtg ctatgcttgc tcttgtggta aatcctaagg
     1201 atatcatggc atttattcat ttggttcagt ataccaaagg agtaggcgga gttttagcaa
     1261 aggaaatttt tgatgctctt ttaaaattag gtcatggtag cttgataagg ggttttttag
     1321 aacctgataa aagtgtaaat ttgcaaaacc atcaaaaaag aaattaccag cttgggcttt
     1381 ttgcaggctt agaagaacta gccagtgaaa atcgttttaa atttgagagt gagttcaatg
     1441 ctcatcctat cttaaaactt tcaaagatta atgatttatg tgctaaaaat ttagaaaaaa
     1501 tttatttttt cttaaaaaaa gctatggaaa caaaacattc tttagcactg gttaatttaa
     1561 tttgtgaaaa ttctttttat aaggaaattt gcgaagaatt agccatcaaa agagcgacaa
     1621 ataaagcagg gcaagtggat cttttaagaa aaaaagaaaa tttagaaaag atagaaacga
     1681 aatttaatgt tttaaaagaa ctcactaaaa attatagcga tatttataag tattataatt
     1741 ttttaaccct aggtgcaagc gagatgagta atggcaaggg tgtaaatttg cttagcgtgc
     1801 atgcaagcaa gggtttggaa tttgatttgg tatttgtgat cgatcttgca caagggcgtt
     1861 ttcctaatca aaaacttatg agcatgggcg gaagcttgga agaagaaaga aggctgtttt
     1921 atgttgcggt aacaagggct aaaaatatac tttatcttag ctatgcaaaa tacgacaaaa
     1981 ataaaaaaac tgcttttaca ccttcgcgtt ttcttataga agcagggctt tgcaagggag
     2041 agttaaccat agattgataa cattttcttt caaaataaat atcattgaaa gaaaggttta
     2101 aaatatgaaa aaatatttat ttttttaagt ttagtcgcag caagtttttt aaatgctgaa
     2161 gttttaattt atggtcctgg cggtcctgcg ccggttatga aagaactagc attgaaattt
     2221 gaagaaaaaa ctaaagaaaa agttgtagtg actgcaggtc ctaccccatc gtggtttaaa
     2281 aaggctagaa aagatgcgga tttgattttt tcgggtaata cttctatgat ggatggattt
     2341 atcaaaagaa ttcctagctt gaatttagaa gatttggttg ttttaaatgc ccgtccttca
     2401 ggtatcatcg tgcgtcctaa taacccaaaa atatcaaaag ttttgaggat attttaaaag
     2461 ataatgtaaa tgttatggtt gttgatggtg caggtcaagt tggactttat gaggatatgg
     2521 ctttaaaaga tggtaaaaga gaaaatttgg tcaagttgcg taaaaatatt aaagtttatg
     2581 ctaaaaattc taaaatagct atagatgagt ggaacaacaa tccaaacata gacgctttaa
     2641 ttatttggtc gcattgggct aaggttttag gagataaggc tttgtttatc gaagatgaaa
     2701 aagcagcagt ttattgcaca gctgaaatca ttcctaccaa aaaaaggact tcaaaataaa
     2761 caagctttag aatttgtgaa atttattcaa agtaaagaag cccaaaaaat ttggaaaaaa
     2821 catgcttgga atgaagttga gtgattttaa gctgagtatt taaagaatta ataataatta
     2881 ttaagatata ataattttcg aaacattaaa attacaaaaa tgtttcaatt tataaaaata
     2941 aaggatgaca aaatgagttc agtaaatttt aaaggaaacc cagtaaaact taaaggaaat
     3001 tcagtagaag ttggagcaga tgctcctaaa gtaggactta aagctaaaga tttaagcacg
     3061 attgaaattg gtgctgcagg taaaacacaa attgttttaa gtcttccaag cttagatact
     3121 ccagtttgcg caactgaagc aagagaattt aacaaaaaag tagcaagcta caatggagct
     3181 gaagttgtgg ttgtaagtat ggatttacct tttgctatgg gtagattttg cagtactgaa
     3241 ggtatagaaa atctaagtgt tgctagcgat tttgtagcaa aagaatttgg agaaaaatat
     3301 ggcgttttaa ttggtgaagg tccactagaa ggtcttttag ctcgtgctgt atttgtaatc
     3361 aaagatggta aaatcgctta taaagaatta gtaagtgaag tgacagaaat gccagatatt
     3421 gcaaaacttg atgcattttt tggtggctct agctgctgcg gcggatgcgg ttgtcattaa
     3481 ttttctacat ataaagcccc caatggggct actttcttag cttttcaaac aaaatcattt
     3541 atcaaacatt attttatatt tttattagat tagagttttc tagcctgttt tattttttat
     3601 aatcttatta tttcaaaaat gataaaagga caataaaagt cctataaaat agggctttga
     3661 aattattatt ttttgcaaaa aattcaagat aattttattt tctatttttt ataataaaat
     3721 gatttttatt attttggagg attagagtat gaatagaagg gattttatta aaaataccgc
     3781 tattgcgagt gctgctagtg ttgcaggtct tagtgtccca aggccagtat ttggcgcaca
     3841 agaggaagaa tggaaatggg ataaagccgt ttgtagattt tgcggaacgg gctgtggaat
     3901 tatgatagct agaaaagatg gcaaaattgt agcaatcaaa ggtgatcctg ctgctcctgt
     3961 aaatcgtggc cttaattgta ttaaaggata ttttaacgct aaaatcatgt atggagaaga
     4021 tcgtcttgtt atgcctttgc ttcgtatgaa tgataaggga gaatttgaca aaaaaggaaa
     4081 attcaagcaa gtttcctggc aaagagcctt tgatgaaatg gaaaaacaat ttaaaaaagc
     4141 ctacaatgaa ctcggcgtta caggtatagg gatttttggt agtgggcaat acactatcca
     4201 agaaggttat gctgctttaa aacttgcaaa agcgggtttt agaacaaata atatcgatcc
     4261 aaatgcaaga cattgtatgg cctctgcagt ggttggtttt atgcaaactt ttggtgtaga
     4321 tgagccatca ggctgttatg atgatataga acttaccgat actatcatca cttggggagc
     4381 taatatggct gaaatgcacc ctatactttg gtcaagagtt agcgatagaa agctaagcaa
     4441 tcttgataaa gttaaaattg tgaatttaag cactttttct aatcgtactt caaatattgc
     4501 tgatattgaa atcattttta aacctaatac agatttagct atttggaact atatagcaag
     4561 agagattgtt tataatcatc ctgaagctat ggataaaaaa ttcattaaag atcattgtgt
     4621 atttgcaaca ggttatgcag atattggtta tggcatgaga aataatccaa accatcctaa
     4681 atttaaagaa agcgaaaaag ataccgttgc aaaagaaaat gcaatcactt tagatgaaga
     4741 agaagcaacc tctctttctt atcttggtgt gaaagcgggt gataaatttg aaatgaaaca
     4801 tcaaggcgta gctgataaga attgggaaat ttcttttgaa gaattcaaaa aaggtttagc
     4861 accttatact ttagaatata ccgcaaaagt agccaagggt gatgataatg aatctttaga
     4921 agattttaag aaaaaactcc aagaattggc taatttatat atagaaaaaa atcgtaaagt
     4981 agtgagcttt tggactatgg gctttaacca acacacaaga ggctcttggg taaatgaaca
     5041 agcttatatg gtgcattttt tacttggcaa acaagctaag ccaggtagtg gggctttctc
     5101 tttaacagga caaccaagtg cttgtggaac tgctagagag gtaggaacat tctctcaccg
     5161 cttgcctgca gatatggtcg tggcaaatcc aaaacacaga gaaatttcag aaaaaatttg
     5221 gaaagtgcct gcaaaaacaa tcaatccaaa accaggttcg ccttatcttg gtattatgag
     5281 ggatttagag gatggtaaaa ttaaatttgc ttgggttcaa gtaaataatc catggcaaaa
     5341 taccgcaaat gcaaatcact ggatcacagc agctagagat atggataatt ttatcgttgt
     5401 gagtgattgt tatcctggaa tttcagcaaa agtagccgat cttatcttgc caagtgcgat
     5461 gatttatgaa aaatggggtg cttatggtaa tgctgaaaga agaactcaac actggaaaca
     5521 acaagtttta cctgtaggtg ctgctatgag tgatacttgg caaattttag aatttgcaaa
     5581 acgctttaag cttaaagagg tttggaaaga acaaaaagta gatggtaagc ttactttacc
     5641 aagtgtacta gaagaagcaa aagctatggg ttatagcgaa gatgatacgc tttttgatgt
     5701 tttatttgcc aataaagaag caaaaaactt tacttcaaat gatgctgtta tgaaagatta
     5761 tgacaatagt gaagttaagg gtgatgaaag aaaaattcaa ggcagtgatg gaaaagaatt
     5821 taaaggatat ggcttttttg ttcaaaaata tctttgggaa gagtatcgta aatttggttt
     5881 aggccatggt catgatttgg ctgattttaa cacttatcat caagtaagag gtctaagatg
     5941 gccagtggta aatggtaaag aaacacaatg gagatttaat actaaatttg attattatgc
     6001 caaaaaagct gctccaaatt cagattttgc tttctatggt gaatttaata aaatgcttac
     6061 caatggggat ttgatagctc ctaaggatga aaaagaacat agtattaaaa ataaagctaa
     6121 aattttcttt agaccattta tgaaagcacc tgaaagacca aatgaagagt atccattctg
     6181 gctttcaact ggaagggttt tagagcattg gcatagtggg actatgacta tgcgtgtgcc
     6241 agagctttac cgtgctgttc cagaggcact ttgttatatg agtgaaaaag atggtgaaaa
     6301 attaggttta aatcaaggag atttagtttg ggtagaatcg cgtcgtggta aagtaaaagc
     6361 aagagtagat atgcgtggca gaaacaaacc acctgtagga cttgtttatg tgccttggtt
     6421 tgatgagaat gtatatatca ataaagttac tctagatgca acttgcccac tttctaagca
     6481 aactgacttt aaaaaatgtg cggtaaaaat ctataaagct taagataaag gtttgatttg
     6541 atgaaagata gaagagaatt ttttgctagt gcttttaaag gtttgtgtct ttgtactgcg
     6601 ggtggatttt tggcaaattt aagcttaaag gctgacgatg attacgcctt gaggccacca
     6661 ggagctgaag atgaggcgag atttttaagc aaatgtattc gttgtggttt gtgtgtaaaa
     6721 gcctgtccat acaatacttt aaaacttgct actttgttag atagtgcaaa aaacggaact
     6781 ccttttttta aggctagaga aattccttgt tatctttgca aggacatacc atgtattaag
     6841 gaatgtccaa ccgatgcttt ggataaaaaa catttagagc agggcataga atctttaaaa
     6901 atgggtattg cgatcgtaga tagtgcttct tgtgtagcgc attggggaat tcagtgtgat
     6961 gcttgttata gagcttgtcc tttgatagat agggctttaa aacttgaact taaacgcaat
     7021 gagcgcactg ctaagcacgc ctttttattg cctagtgttg atcatgaagt atgcgtaggc
     7081 tgtgggcttt gcgagcttgc gtgtattacg gaaaagcctg ctattcgtgt tttaccacgc
     7141 gagtatgttt taggtaaggc tggttcgcat tatgtaaagg gctgggatca agaggatgaa
     7201 gatcgtataa aagatgcaga tacttctaaa tattttgatg ctaaaaaggc aacaaattat
     7261 ttaaatgagg gagaattttg atgaggtatt taatcgctag acgcatcgtt caaatcggaa
     7321 ttttagctct ttttagtttt aaggctacgg attttatctt aaaaggaaat ttaagttctt
     7381 ctaggctttt tgataccctg cctttaagtg atccttttgc agtgattcaa atttatttag
     7441 caagttttag catagattta atggcactta tgggagcttt gatcgtttta attctttatg
     7501 gagttttctt aggtcgtgct ttttgtgctt gggtatgccc tgtaaatttg attactgatt
     7561 ttgctgcctt tgttcgctct aaaatggctt ttaaacagag taaggtttta atcttaagta
     7621 aaaatttaag atattatatt ttagctttga gtttaattct ttcttttgta ttgtctttgc
     7681 ctgtatttga aagtatgtct tatataggca ttatacatag agggattatt tttggcacca
     7741 cttcttggat atttatagct tttatacttt tttgtataga tgcttttttg agtcctagag
     7801 cgatatgttc gcatttgtgt cctttagggg ctttttatgc tctcatctct cgttttgcgc
     7861 ttttaaaaat caagcacaat catcaaaaat gcactaagtg ttataaatgt attggaattt
     7921 gtcctgaaaa acaagttctt tggatgatag ctaaagaaag cgcgagtgta aattcggggg
     7981 aatgtataag atgtggacgc tgtgtagaag tgtgtaacga tgatgcttta aattttaata
     8041 tatttgattt aaggaaaaaa taatgaaaaa gaaaacgatt ttactaggaa gcgttgctat
     8101 aatgttttta gccgcttgtg cgttaaatag tggggtgagt tcagagcaaa ttggacttag
     8161 gaaagcaagt ttggaaaatg aaaataaggt agctttggtc gatgctagtt ttactgcttt
     8221 acagccaggt gaatctgtgc tttttgagcg ttcttttgaa aatgcaccac cgcttatttc
     8281 gcatactatt gaggatatgt tgcctattac taaggataat aacacctgcc ttagttgcca
     8341 tgataaagca attgcaaccg atgttggcgc aactcctctt cctgcgagtc attattatga
     8401 ttttagaact aataaaacca caggagatgc gatcagtgat tcgcgcttta attgtaccca
     8461 atgtcatgtt ccacaaagtg atgcaaaacc tttagttgga aatagtttta aggctgaatt
     8521 taaaaatgaa ggcttgaaaa atcgttctaa tttaatcgat gtaattaatg aaggtgttga
     8581 gtaaaataat gaaaaaaatt cttttcattt taagcttttt atatatttta tctcctgctt
     8641 atgagctaaa gcttaattca aatattacag ctttaaagct tgatcagcag gagctgtata
     8701 taggcactga taagggtgag atttatgagt ataatctaaa agataaaagc ttaaaagaac
     8761 ttttatcttt gcctaaaatt aaaaattatt atgagggtga ttttgctaga atttataata
     8821 tcgatgttta tcaaaattct cttttgatac ttagcgaagg cgattttgga gcaaaaaatt
     8881 taagccttta taataacaat cttcaaattc aaacacttca agaaagcagt gttaaagagg
     8941 ctttttttat agatgaaaat acctatcttt tggttttatt gggttctaaa atagagcttg
     9001 ttgataagga tttaaagcgt ataaatgagt ttaaattctc tcattctagt ttaaatgatg
     9061 cagctttaaa tgaagaaaaa accaagttta tagcaggatt tgaaagtggg gaggtggaac
     9121 tttttgattt gaaaagttgg aaaatattaa aaaactatga taaaatgcac aaagataata
     9181 tctatcaagt tgattttaaa aatgatattc ttataagttg cggcacagat aggcgtatag
     9241 gtttggtaaa aaatgaagag caaacttttt tgcaaaaaga ttttttaatc tatacttgcg
     9301 ctttaagtcc tagtgggaaa ttggctgcgt atagtgataa tgaagagggt tttaatgagg
     9361 tttttgatac aaatacccta aaaactgtta gaattttcaa ggatgaaaat ttaatgagtg
     9421 aaattatcat ttttatcaac gaaagagaat tgattatctc aggctttgga gataaaattg
     9481 tatttaggag tttagatgaa tctttctagc gttttgatcg tagctaaagt acaacatata
     9541 gatgaattaa aaaaagaaat cttaaaaatt ccttcatgtt caatagagct ttgtgagaat
     9601 gaaaaaatca tcgttgtgat agaaagtgaa agtttagaaa aagagcttga gtcttacaaa
     9661 atgcttgaaa aattacctca tattatcagt ataaatatgg ttttttctta tcaagatttg
     9721 gataaagata tccaaaaagc tataaatagc ggagcgatac aaactataga aaaaaatgaa
     9781 aatgctgaaa atattcgtta ttatggtagt atttacaatc aaatgtcttg attaaagctt
     9841 ttagatggtt tttttaattc ctttgcttat tattatagct attatttttg gtattgatta
     9901 tttgtatttt aatgatgaaa atgtcaaagt aaaagaagag cgacaaattc ataaaagcga
     9961 tccaaattta gataaacaaa gagaagaata tctaaaacat ttattcaaag agaaaaaatg
    10021 aagcaaagag aactctttct tcttactatc cctgttttaa tgggttatat ccctttaggg
    10081 gctgcttttg gaattttagc tgctagtaaa gatttttctt tgtttgaaat tttgcttagt
    10141 tcaattttta tttatgcagg tgctgggcaa tttcttttag tagctttagt ggcgcaaaat
    10201 gtatcttttt tgatgatttt ttttactttg tttttattga attttcgcca ttttttctat
    10261 actttatcac ttttaaaaga gctaaaatcc attaattttc taaggcacta tattatcttt
    10321 gctttaacag atgaaagttt tgctctttta agctctatta aagagaaaat caaaaatctt
    10381 agtcgtgcgc aaagatcgct tattatgttt gaagtttgtt tattgaatca aatttattgg
    10441 gtaataggtt ctgttttggg ttattatttt aagcagggtt taaatattga ttattcgggt
    10501 gtagaattta gtcttaatgc cctttttatt gtgctagctt atgagcttta taaacaaaat
    10561 cctaatttaa aaattttact ttattcttct tttgtggcac tttttgcttt attttgcata
    10621 gacaagcctt atatgttggc tttttgtatt tttatcgctc tgatgatttt gatttttgga
    10681 aaaaaatatg ttagataaaa atattttata tgcgatttta gcagcttctt tagcgactta
    10741 tttaactcgt gttttagctt ttattttgtt taaaaataaa aaagaaaact atcacttgct
    10801 ttttgtgcag tataatatgc ctttagttat catcatcatt ttattttttt atacttttta
    10861 tgaggtggat ttttattctt atccttatgg gcttgatttt attgtatctt gtattttggt
    10921 atttttgata catctgcttt ttaaaaatgc acttcttagc attattttag gaactatttt
    10981 ttatatgttt gtgttaagat tgttttaatg gactatactt tatttatctt gacttttgtt
    11041 tcggtttctt tactgccagg attgtgtatg agcctagctt tttccttggg actttcttta
    11101 ggatataaaa atactttatg gatgatattt ggcgagcttg tgggattagc attagtggtt
    11161 ttgtgttgtg ctttggggat agagtttatt ttgcgatatg aaaatttatt taaatttttt
    11221 caaatagcgg gtgctttata tcttttatat attgctttta tattgtttaa atcaaaaagt
    11281 caaattactc aagaaaaaat catccataag aaaaaatttt ctcttatcat ccaaggcttt
    11341 atagcttcat cttctaatcc aaaagcatgg atttttatgt tttccatctt gccttctttt
    11401 ttaaaatttc aagtgaatgt aaatattttg cttttgatta ttttgttgat agaattttgc
    11461 tctttaagtc tttatgcttt aggcggaagt atatttaaga tctttatgaa taagcattta
    11521 gataaaatca ataaaatcag cgctttgttt atctttgcaa tggctcttag cgtattatat
    11581 aaagtttaac ttaaaatgct ttttgctaaa attaaaaaaa aatattagga aagataatga
    11641 aaaacacagt tacagaagct tccatttatg aagcccaagg gcttaaggat gaagctttag
    11701 agatttataa aaatatttta aaagaagatc ctaataacca aaatgcaatt gatgcagtgc
    11761 gtcgtcttag tgggtttcgt tctaagcatc aggatttaaa tactcaaatg cttgattttt
    11821 ttataaatat gaaaagcgat gaagagatca atgaatttaa aaggtggttg ataaaaatat
    11881 gaatttagaa gatttggcaa agaaaactat cagtgaagtt agctctatca tggaagaaca
    11941 aagaaggcaa agtgaaattc taaaagaaca agaagagctt agaaagactc aaattcaaga
    12001 ggatatgcct acggttaaac ttaaggaaga gcctattttg gagcaagaat tagaagataa
    12061 aatttctatg gcgaaatttg aagaagagca aaaaattcaa gaagagataa aaaatttaga
    12121 tgaattaaat caagaaaata aagagccagt taaagaagag gctgttttgc aaagtgaaat
    12181 tttaaaccct agtattatag cagaggtgca aactcttaat gaagatatat ttttaaaaca
    12241 ccttagagaa agaattttgg ttctttttga gggtttaaat agtgttaagg aggagaattt
    12301 ggaacacaga cttcaattaa ctattaattt tttagagttt ttgcttgcaa acatcgaaga
    12361 taagcttaaa aaataatgca gatttaaaat ttgtcattga ttttctaagt ccctatactc
    12421 aaagggctta tttggttggt gggagtgtaa gggatttatt tttaggttta gaaatttatg
    12481 attatgatat agagctttac gatataacgc ctagtgattt tgaaaaaatg atgaaaaaac
    12541 taggcgcgca aggctttgga aaaagttttt ttgtatataa atttaaaaat tatgattttg
    12601 ctcttgctag aactgaaaac aagacaggtt atgggcatac gggttttgag gtgcaaattt
    12661 gtaatgatga aaaattaggc gccaaaagac gcgattttac tataaattct atgatgatca
    12721 atctttttaa tgatgagttt ttagactttt atggaggatt aaaagatcta gagcagggca
    12781 ttttaaggca tattgatcaa acaagttttc aagaagatag tttaagaatt ttaagagcag
    12841 tggcttttgc ttcaagattt gattttaaaa tagcagatga aagcttaaaa ttaatgcaaa
    12901 gcatgaatat aaaagatctt agcagagata ggatcaatgc tgagctttat aaatttttta
    12961 aaagctctaa gcttgaagtg ggctataaat atttacaaga gcttaatatg gaaaaagaaa
    13021 tttttggctt tgatagtgct tttaaaagca tggaatttca agctttgctt agaaaaagta
    13081 gagaagtagt taaagacgat gctttgtttt tgtatttgta tttaaatttt tttaatttaa
    13141 acaaagagga attttttaaa aaaagcaaaa taaaaaaaga gtatttcaaa aaggcaaatc
    13201 aagcttttta tcttgatgaa atgagtgatt ttgatttagc aagtattgct ttggatatgc
    13261 ctttaaaaga atggcttggg ctttgggata aagagcgcat aaagtgggct aaaaaattca
    13321 aactttatga gaacaaattt aaaacaagta ttttagcaaa agattttctt gatgctggaa
    13381 tttatggtaa aatgttgggt ttaaagctta aagaagcaag agaaaatgaa ttatatgaat
    13441 atattaaaag gttaaattaa atgatttctg tattaaaaat ttgcaccaag gatcaaaaag
    13501 gtttgattta tcgtatttct gatgtgattt ttaaatatca tatcaatata gtaaaaaatg
    13561 atgaatttgt gggcgaagaa atgttttttt tccgcgctat tttagagggt gaatttgata
    13621 aaaaagcctt tgttgggaca cttgaggcga tgttgggaga agaagcttat atagagcttt
    13681 gtgaaaaaag aaagaaagat attattgttt ttgctactaa agaaagccat tgtttgggag
    13741 atttattgat caagtattat agcaatgagc ttgaggctaa tatcaaagcc gtgatttcta
    13801 atcacgacac tcttaaaaac ttagtagaaa aatttgaaat cccttatcat tgcatcagtg
    13861 cagaaaattt aaagcgcgaa gagcaggaaa aacaagtttt agaatgttta aaagaatatc
    13921 aatttgatta tttggttttg gcaaaatata tgagaatttt atcccctgat tttgtcaaac
    13981 attttgaagg aaagatagtt aatatccatc attctttctt gcctgcattt gtgggagcaa
    14041 atccctataa acaagctttt gagcgtgggg tgaagattat tggagctacg gcacattttg
    14101 ttaataataa tcttgatgaa gggccgatta tcactcaagc agttttgcct gtaagtcatg
    14161 aatacacttg gcaagatatg cagcaagctg gacgcaatgt tgaaaaaaat gtgctttcaa
    14221 aagctcttga tttggttttt gatgatagaa tttttataca taaaaataaa accatagtat
    14281 tttgataaaa gattgagtat tt
//
LOCUS       DBBXOW010000042        14160 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.043, whole genome shotgun sequence.
ACCESSION   DBBXOW010000042 DBBXOW010000000
VERSION     DBBXOW010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14160
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.043"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            25..954
                     /locus_tag="ACJE1S_001227"
     CDS             25..954
                     /locus_tag="ACJE1S_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806777.1"
                     /translation="MNFKFFSIIVGILVVVILILSGTYYYLFEYSKPSYTPITQTSTE
                     QNQYSNNTHTTTQNSYVSDITNTNNENINLIQDKQDEKDANNIINDDNKSDTKSSQIT
                     KQNNEEKLAAIEKEISKQQKILEQEKIFKPQNTNNNKTNYQAKKLSPAQEYLSLGKNS
                     RLEPQLSTENMKVYVLDGKFLSDYRIKLLKDMLAIIEDNSKDYFLSVFVKMLPKGEMS
                     LTIYNKDIIFSDMKKSYKYISMDKISPYIKTPEVLNQYVAREEIIERFKLQTKKEGKG
                     SEFSKHINSLKTGLNKAQYFFPFCEIIEITSVK"
     gene            979..3591
                     /locus_tag="ACJE1S_001228"
     CDS             979..3591
                     /locus_tag="ACJE1S_001228"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HGG0806778.1"
                     /translation="MYDKSIEKTYYQICEERGYFEIDGNKAIQEKNKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREKFIEKIWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLANAVKKAFVELY
                     DKKLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYYLKDSDEYLVVATTRPET
                     FFGDTAVMVHPDDERYKQFIGKELILPLSNKAIKIIADEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLEFISVFDEKGILNEHCLEFKGLERLEARDKIVAKLDSLGFIDKIEEH
                     NNQVGYCYRCNNIVEPYISKQWFVKQEIAKESIEKVALGESKFYPSHWVNSFNAWMKD
                     LRAWCISRQLWWGHQIPVYYCECSHEWASQDTPKACPKCGGQNFKQDEDVLDTWFSSG
                     LWAISTLGWGNDTWGKDKIWFEEDLKEFYPNSLLITGFDILFFWVARMMFQSTNALGA
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNEEQFEDLEKIELKSALAQFVYSRFQDCVKNVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAQKESVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSKSELKTSASIMISKYPQFHAKNSNIEEIFSLIIESIVSIRRAKSLVDLG
                     NSKIEKAYIKLNDKKMQDEIKSYMKFITMLAKCENIEFTENKLQKAICDVSENLEIFI
                     TLNNVDLSGILTRLENQKTKLEKESTKLNAMLSNEKFIANAPKEVVEQNKEALANLKT
                     QLEKISAELANLKG"
     gene            3597..4607
                     /locus_tag="ACJE1S_001229"
     CDS             3597..4607
                     /locus_tag="ACJE1S_001229"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HGG0806779.1"
                     /translation="MIKIQNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLESYQEGSLKVLDAEIKDLSQNNPKKLRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRMHYSQCKIYSKLFGKEYMSEKDLNQKVNSLLDVVGLDHKNKAYPRELSGGQKQ
                     RVAIARALTLNPKILLSDEATSALDPNTTKNILELIAKINAEFGITVVLVTHEMDVVK
                     DVAQKALLLEHGQIIGSGAIDELFLKPNEKMKEFLGESDFLPSTGLNIKLYFPKEVAQ
                     NSIITHMARTLNIDFNIVWGKIEKLNGNALGNLVINIDEKDKSKVLNYIEQSGVLWEV
                     VS"
     gene            4604..5509
                     /locus_tag="ACJE1S_001230"
     CDS             4604..5509
                     /locus_tag="ACJE1S_001230"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HGG0806780.1"
                     /translation="MNEVSIFDAFLGRISQFFTEFSWQGIKEVSLNSISTFAQNYENI
                     LKPALNETIYMSLMAVFFGFILAIIPGILLAIWDKNGIKHNKIAYAVLDFITNLLRAF
                     PFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEVDHGIIEAAK
                     SYGASNTQIIFKVIFNESLPNIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYGYE
                     RFNKEIMIQTVVILLVLVQLVQILGNLFYTWAKNSKTLYILATLIALFVISIIININN
                     DESFVWQAIILIVLALCFIYKFLKK"
     gene            5703..6476
                     /locus_tag="ACJE1S_001231"
     CDS             5703..6476
                     /locus_tag="ACJE1S_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG0806781.1"
                     /translation="MNIKNLIVASFLGLAVNLTAAETISIAATPVPHVEILEQVKPEL
                     EKQGYKLEIKEFTDYVLPNLAVDSGEVDANFFQHTPYLEEFNKNKGTKLTKVANVHIE
                     PMAVYSKKYKSLDDIKEGATIAIPNDPTNESRALDIIAKKGLVEFKEKALKTPLDITT
                     NPKKIKFVELKAAQLPRALNDVDFAVINSNYALSANLNPAQDGVFIEDKESPYANILV
                     VKTGNENDPKIQALAKALQSEKVKQFIIEKYKGSILPAF"
     gene            6531..7301
                     /locus_tag="ACJE1S_001232"
     CDS             6531..7301
                     /locus_tag="ACJE1S_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG0806782.1"
                     /translation="MKLFKIILLFCLLNLSPIFAKTITIGATPNPFASLLEKVKDDFK
                     DKGYELKIIEFSDYILPNRALEEKELDANLYQHKPFLEEYNAQKGTNLTPTTPVVIAP
                     VGIYSKTIKDLKNLKKGARVAIPNDATNESRALELLEKAGLIELNQNTLKTPLDIKKN
                     PKNLKFIELKAAQLPRALDDVDIAVINSNFALGAGLNPIKDTIFREDKNSPYVNYVVV
                     RFEDKDNEKTKIIDEILRSDKFRNIIDEHYKDVLIPAF"
     gene            7311..8088
                     /locus_tag="ACJE1S_001233"
                     /pseudo
     CDS             7311..8088
                     /locus_tag="ACJE1S_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793437.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
     gene            8166..8828
                     /gene="flgA"
                     /locus_tag="ACJE1S_001234"
     CDS             8166..8828
                     /gene="flgA"
                     /locus_tag="ACJE1S_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HGG0806783.1"
                     /translation="MRIISFIFFVFIGLSHGANLEEIKTALAKEFKNNFPSLIIKNID
                     LKITTLPKDFEQYQFIRIANARFNQAQGFIRAEFKTPQNIQKNVFFRYFMQASLEVLK
                     SERSIQRGDKLGAFDYKSVLMDFDKVPSNALALEDTHNLIAKSNISKNTILKENMFKT
                     MALIRRNDPIIGVLSDGNVDVLIELTALHSADMGERIRAKNKEGKVMQGIVTGKNRMI
                     IQ"
     gene            8825..9388
                     /locus_tag="ACJE1S_001235"
     CDS             8825..9388
                     /locus_tag="ACJE1S_001235"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0106141 - flavin prenyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HGG0806784.1"
                     /translation="MKILLGISGSSSTHLGLKLLKNLENKCELYCIITEGAKISFEAE
                     NKKNLEKICQEQFQNICFLNDNNLSASVASGSFSIEKTIIAPCSISSLAKIHAGLADT
                     LLMRAAAVALKERKSLILGVREMPFSTLILEHMHKLSQLGVIIAPPIIASYSHASNLE
                     QMENFIIGKWLDLLGISHNLYERWQNF"
     gene            9428..9904
                     /gene="coaD"
                     /locus_tag="ACJE1S_001236"
     CDS             9428..9904
                     /gene="coaD"
                     /locus_tag="ACJE1S_001236"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HGG0806785.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDKVIVAIANSEHKKPCF
                     SLEQRKELAKLTTSHLNNVEIITFDNLLVDLAKELKVNTIVRGLRAVSDFEYELQIGY
                     ANHALWEEIETIYLMPNLKNAFISSSIVRSIASHGGDISTLVPKEILPFLKDLPCM"
     gene            9895..10473
                     /gene="tmk"
                     /locus_tag="ACJE1S_001237"
     CDS             9895..10473
                     /gene="tmk"
                     /locus_tag="ACJE1S_001237"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HGG0806786.1"
                     /translation="MYVVFEGVDCVGKSTQISLLKECFKEAVFTAEPGGTKLGNHLRE
                     LLLYKPYQLDKKTELLLFLADRAQHCEEILKANQDKLIISDRSFISGMAYAKDFENEE
                     LFRLNAFALENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYFLSVQDKLENTL
                     YFLKEKINLQVLTLNANDTKENLHQKIKDFLQ"
     gene            10470..11696
                     /gene="hisS"
                     /locus_tag="ACJE1S_001238"
     CDS             10470..11696
                     /gene="hisS"
                     /locus_tag="ACJE1S_001238"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HGG0806787.1"
                     /translation="MINALKGMKDLSDKDALYYEKIIKTCEEVAKNYGFNFINTPHLE
                     QSILFKRSVGESSDIVGKEMYEFTDKGGNEVCMRPEGTAGVVRAYIEKKLDKNISVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGIPSVYEDASIILMLVEIFSRLSIDFKLQ
                     LNSLGCSQCLPKYRDELVEFLDSKEGFCEDCLRRKNLNPIRVLDCKNEYCQNLLENAP
                     LLINNLCTSCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLGGKSGYGIGFAMGIERIIAILEQKEELEKREGIYLCAMDEIYIP
                     KLLQIATKLRKKHKVILSYEARKLAKHLENGDKINSKHFLCMGENEAKSESLFYKNLE
                     NKDEKVIQISDLENAL"
     gene            11693..13528
                     /gene="speA"
                     /locus_tag="ACJE1S_001239"
     CDS             11693..13528
                     /gene="speA"
                     /locus_tag="ACJE1S_001239"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HGG0806788.1"
                     /translation="MMNYGIDIWGNDNFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIESIYGSFNKARKEFNYKGKFNAVYPLKVNQYPGFVKNLVRLGK
                     DYNYGLEAGSKAELLLAMAYNNEDAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIVDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLVA
                     PVLELFSQEYTESKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKNNPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEATISVNEKGYEIEGIIEAQSILDALEDLDYD
                     IHTIMDILNERISNSKLVNEKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13529..>14160
                     /gene="cysE"
                     /locus_tag="ACJE1S_001240"
     CDS             13529..>14160
                     /gene="cysE"
                     /locus_tag="ACJE1S_001240"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HGG0806789.1"
                     /translation="MGFFGIIKEDFSQPKVQDPAYNSCIELFFNYPGVWAVVNYRFAH
                     FFYTKNFKRTARIISGISQFLTGVDLHPGATLGRRIFIDHANGVVIGQTAVIEDDVLI
                     YQGVTLGGTSLEKGIKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIVEERRKNKENTRAVDANCEDKLEKLERKIAELEKALSDIK"
BASE COUNT         5298 a         2056 c         2492 g         4314 t
ORIGIN      
        1 attttatttg ttaaggaatt aaagatgaat tttaaatttt tttctattat tgtagggatt
       61 ttagtcgttg tgattttaat acttagcgga acttattact atctttttga gtattctaaa
      121 cctagctata cacctataac acaaacttca acagaacaaa accaatacag caataacacc
      181 catacaacaa cccaaaactc ttatgtttct gatattacaa atacaaataa tgaaaatata
      241 aatttaatac aagacaagca agatgaaaag gatgcaaata acatcattaa cgatgacaac
      301 aaaagcgata caaaatcttc tcaaattaca aaacaaaaca atgaagaaaa actagcagcg
      361 attgaaaaag aaatcagtaa acagcaaaaa attttagaac aagaaaaaat atttaagcct
      421 caaaatacaa ataacaataa aacaaattat caagctaaaa aactaagccc agcgcaagaa
      481 tatttaagct tgggaaaaaa tagtcgcctt gaacctcaac taagtacaga aaatatgaaa
      541 gtttatgtgc ttgatggtaa attcttaagc gattatagaa tcaagctttt aaaagatatg
      601 ttagcgatta tagaagataa ttctaaagac tattttctta gtgtttttgt taaaatgctg
      661 cctaagggag aaatgagttt aactatttac aataaagata ttattttctc tgatatgaaa
      721 aaatcttata aatatataag tatggataaa atttcacctt atattaaaac ccctgaagtg
      781 cttaatcaat atgtagcacg cgaagaaatt atagaaagat ttaagcttca aactaaaaaa
      841 gaaggaaaag gaagtgaatt ttctaagcat ataaatagct taaaaactgg acttaacaag
      901 gctcaatact tttttccatt ttgtgaaatc atagaaatta cttccgtaaa ataagccgcg
      961 taaaaaaggt aaaaaataat gtatgataaa agcatagaaa aaacatatta tcaaatttgc
     1021 gaagagcgtg ggtattttga aatcgatgga aataaagcca tacaagaaaa aaataaaaat
     1081 ttttgtatca tgatgccacc gcctaatgta acaggcgttt tacacatagg ccatgcttta
     1141 acctttactt tgcaagatat tatgacacga tataagagaa tggatggcta taaagttctt
     1201 tatcaaccag gacttgacca tgcaggaatt gccactcaaa atgttgtaga aaaacaactt
     1261 cttgctcaag gcattaaaaa agaagaattg ggtcgtgaaa aatttataga aaaaatttgg
     1321 gaatggaaag aacaaagcgg tggaaaaatc ctagatcaaa tgagaactct aggaattact
     1381 cctgcttgga gccgcttgcg ttttactatg gatgaaggct tagcaaatgc tgtaaaaaaa
     1441 gcttttgtgg aactttacga taaaaaactt atcgtgcgtg gaaactatat gatcaattgg
     1501 tgcactcacg atggagcttt aagtgatata gaagtagaat acaaagaaaa caaaggcaaa
     1561 ctttatcata taaaatatta tttaaaagat agtgatgaat acctagtcgt agcaacaacg
     1621 cgtcctgaga ctttttttgg tgatactgca gtcatggttc atcctgatga tgagcgttat
     1681 aaacaattta taggaaaaga actgatcttg cctttgagca ataaagccat taaaatcata
     1741 gctgatgaac atgtagaaaa agaatttgga acaggggttg taaaggttac ccctgctcat
     1801 gatatgaatg actatgaagt aggacttaga cataatttag aatttataag tgtttttgat
     1861 gaaaaaggaa ttttaaacga gcattgtttg gaatttaaag gcttagaacg attagaagct
     1921 agagataaaa ttgtagctaa actggatagt cttggcttta tagataaaat agaagaacat
     1981 aacaatcaag taggatattg ctatcgttgc aacaatatag tcgaacctta tatttcaaaa
     2041 caatggtttg taaagcaaga aatcgccaaa gaaagtatag aaaaagtagc tcttggcgag
     2101 agtaaatttt atccaagcca ttgggttaat agctttaatg cttggatgaa agatttaagg
     2161 gcttggtgta tttcaagaca actttggtgg ggacatcaaa ttcctgtgta ttattgtgaa
     2221 tgctcgcatg aatgggcaag tcaagataca ccaaaagctt gtccaaaatg cggagggcaa
     2281 aatttcaaac aagatgaaga tgtactcgat acttggtttt cttcgggact ttgggcaata
     2341 agtacacttg gatggggaaa tgatacttgg ggaaaagata aaatctggtt tgaagaagat
     2401 ttaaaagaat tttatcctaa ttctttattg ataaccggtt ttgatatttt gtttttctgg
     2461 gtagctagaa tgatgtttca aagtacaaat gctttagggg ctttaccttt taaagatatt
     2521 tatttacacg ctcttgttaa agatgagcaa ggtagaaaaa tgagtaagag tcttggaaat
     2581 gttattgatc caaatgaaag cattaaagaa tatagcgccg atatcttgcg tttcacctta
     2641 gccttgcttg ctatacaagg acgcgatatc aagcttagca atgacaaact tttacaagtt
     2701 agaaatttca caaataaaat ctataatgcg acaaattatc tacttttaaa tgaagagcaa
     2761 tttgaagact tagaaaagat agaacttaaa agcgcattag ctcaatttgt ttattctaga
     2821 tttcaagatt gtgtaaaaaa tgtgagagaa aatttagaca attatcgctt taatgatgct
     2881 gcaaacacac tttataaatt cttctgggat gatttttgcg attgggggat agaacttagc
     2941 aaagctcaaa aagaatcagt aaaagaacta ggaagcattt tcaaagaggc tttaaaactc
     3001 ttaaatcctt ttatgccatt tatcagtgag tatctgtatc acaagcttag taaaagtgaa
     3061 cttaaaacaa gtgcctccat aatgataagc aaatacccac aatttcatgc aaaaaattcc
     3121 aatatagaag aaattttctc tttgatcata gaaagcattg ttagcatacg ccgcgctaaa
     3181 agccttgtgg atttaggaaa ttcaaaaata gaaaaagcct atattaaatt aaatgataaa
     3241 aaaatgcaag atgaaatcaa atcctatatg aagttcatca ccatgcttgc caaatgcgaa
     3301 aatatagaat ttacagaaaa caaactacaa aaagccattt gcgatgtaag tgaaaattta
     3361 gaaattttca tcacgcttaa taatgtagat ttaagcggta ttttaacaag gcttgaaaat
     3421 caaaaaacaa agctagaaaa agaaagtacc aaactaaatg ctatgttgtc aaatgaaaaa
     3481 tttattgcca atgcgcctaa agaagtcgta gaacagaata aagaagcttt ggcaaattta
     3541 aaaactcagc ttgaaaaaat atcagctgaa ctagcaaatt taaaaggtta aaaactttga
     3601 taaaaataca aaatttaaaa aaatattacg gaaaagaact ggttattaat gatgtttcct
     3661 tggagataaa aaaaggtgaa atctatgcta tcgtaggaca cagcggtgct ggaaaatcta
     3721 ctcttttaag atgtatcaat ggacttgaaa gctatcaaga aggaagttta aaagtgcttg
     3781 atgctgaaat aaaagatcta agtcaaaata atcctaaaaa gcttagaatg ttaagaaaag
     3841 atataggtat gatttttcaa aattttgcct taatggaaag aaaaaatgta ttcgaaaatg
     3901 ttgcaatgcc tttaagaatg cattatagcc aatgcaaaat ttattctaag ctttttggca
     3961 aagaatatat gagcgaaaaa gatttaaatc aaaaagtcaa ttctttgctt gatgttgtag
     4021 ggcttgatca taaaaacaaa gcctacccca gagaacttag tggggggcaa aaacaacgcg
     4081 tggccattgc tagagccttg actttaaatc ctaaaatttt acttagtgat gaagccactt
     4141 cagctcttga tcctaataca acaaaaaata ttttagaact cattgctaaa atcaatgctg
     4201 aatttggaat aaccgtggtt ttagtcacac acgaaatgga tgttgtaaaa gatgttgctc
     4261 aaaaagcttt acttttagaa catggtcaga ttataggaag tggcgcaatt gatgagctct
     4321 ttttaaaacc taatgaaaaa atgaaagaat ttttgggcga aagtgatttc ttgccttcaa
     4381 caggtttaaa tatcaagctt tacttcccaa aagaagtagc gcaaaatagt attattacgc
     4441 atatggcaag aactcttaat atcgatttta atattgtttg gggtaaaatt gaaaagctta
     4501 atggaaatgc tttgggaaat ctagtgatta atatcgatga aaaggataaa agtaaagttc
     4561 ttaattatat agaacaaagt ggggttttat gggaggtagt atcatgaatg aagtgtctat
     4621 atttgatgca tttttgggaa gaatttcgca attttttact gaattttctt ggcaaggtat
     4681 caaagaggta tctctaaatt ccatcagcac ctttgcacaa aactatgaaa atattttaaa
     4741 acctgcttta aatgaaacta tttatatgag tttaatggct gtattttttg gttttatttt
     4801 agctataatt cctggaattt tacttgctat ttgggataaa aatggtatca agcataataa
     4861 aatcgcttat gcggttttag attttatcac caatctttta agagcttttc cttttcttat
     4921 attgattgtt gtgcttttac ctctttctaa aattatagtg ggcactagta ttggcacaaa
     4981 tgcagccata gttcctttag ctataggtat agcaccttat ttggcaaaga tgttagaaag
     5041 tgcttttaag gaagtagatc atggcattat agaagctgca aaaagctacg gtgcaagcaa
     5101 tactcaaatc atctttaaag tgatttttaa cgaatccttg ccaaatatta ttagcggtat
     5161 aactttgact ttgattttta ccataggttt ttcggccctt gcaggaactg tcggtggtgg
     5221 cggacttgga gatgtggcga ttcgctatgg ttatgaacgc tttaataaag aaatcatgat
     5281 tcaaacggta gttatcttac ttgtattggt gcaattggtt caaattttag gcaatttatt
     5341 ttacacttgg gctaaaaata gcaaaacttt atacattctt gctactttaa tagccttatt
     5401 tgtaattagc ataatcatca atataaacaa cgatgaaagt tttgtttggc aagcaattat
     5461 tttaatcgtt cttgctctgt gttttattta taaattcctt aaaaaataaa aaattaaatc
     5521 cggttttaat ttaaatataa gtttttttaa gtagaataag ccaaaaaatt tttaaaagga
     5581 ttaacagatg atgcctcaga tgcgctagtc tgactatcaa gatttctcat aatgcttctt
     5641 cctgatagtc agagtgatta agattaaagc aagcacaaaa atgactatat aaggaaatta
     5701 aaatgaatat caaaaattta atcgtagcaa gttttttagg tttggctgta aatttaacag
     5761 ccgcagaaac tatcagtatc gcagcaactc cagttcctca tgttgaaata ttagagcagg
     5821 taaaacctga actagaaaaa caaggttata aactcgaaat caaagaattt acagattatg
     5881 ttttacctaa tctagccgta gacagcggag aagtggatgc aaatttcttt cagcacacac
     5941 cttatttaga agaattcaat aaaaataaag gtaccaaact caccaaagta gctaatgtgc
     6001 atatcgaacc tatggctgtt tattctaaaa aatataaaag tttagatgat atcaaagaag
     6061 gtgctactat agctatacca aatgacccaa ccaatgagag tagagcttta gatattatcg
     6121 caaaaaaagg tttggtggaa tttaaagaaa aagctcttaa aactccactt gacatcacaa
     6181 caaatccaaa gaaaataaaa tttgtagagc ttaaagctgc tcaacttcca agagctttaa
     6241 atgatgtgga ttttgctgta attaattcta actatgcact ttctgcgaat ttaaatccag
     6301 ctcaagatgg cgtatttata gaagataaag aaagccctta tgcaaacatc cttgtagtaa
     6361 aaacaggaaa tgaaaatgat cctaaaatcc aagctttagc aaaagctcta caaagtgaga
     6421 aagttaaaca atttatcatc gaaaaataca aaggctcaat tctacctgca ttttaatcct
     6481 tgtccctttt ttagggactc ttcttttttt aatcaccaaa ggagtttttt atgaaattat
     6541 ttaaaattat tttattattt tgcttactga atttaagtcc tatatttgcc aaaaccataa
     6601 ccataggagc tacaccaaat ccctttgcaa gcttactaga aaaagttaaa gatgatttta
     6661 aagataaggg ttatgaatta aaaataatag aattttctga ttatatactg cctaatagag
     6721 ccttagaaga aaaagaactt gacgcaaatt tatatcagca caaacccttt ttagaagaat
     6781 acaatgctca aaaaggcaca aatttaaccc caacaacgcc tgttgtcatc gcaccagtag
     6841 gaatttatag caaaacaatt aaagatttaa agaatcttaa aaaaggtgct agggttgcta
     6901 tacctaatga cgctacaaat gagagtagag ctttggagct tttagaaaaa gctggcttga
     6961 ttgagttaaa tcaaaatact cttaaaaccc cattagatat aaagaaaaat cctaaaaatc
     7021 ttaaatttat agaactaaaa gcagcacaac tcccaagagc tttagatgat gtggatattg
     7081 ctgtgattaa ttctaatttt gcgcttggag ctggactgaa tccgattaaa gataccatct
     7141 ttagagaaga taaaaatagc ccttatgtaa attatgttgt ggttcgtttt gaagataaag
     7201 acaatgaaaa aactaaaatc atagatgaaa ttttaagaag tgataaattt agaaatatta
     7261 ttgatgagca ctataaagat gtactaatcc ctgcatttta aggagttttt atgaaattta
     7321 aaaaaatatt actgagtgtt ttttgcataa caagttttct ctttggagcc gaaaagagta
     7381 tcattatagg agcaacgcct actccttatg ctgaaatctt aaattttgca aaacctattt
     7441 ttaaagaaag aggttggaat cttgaagtaa aagaatttag tgattataat atacctaata
     7501 tctcgcttaa tgaaaaagat ttagatgcaa atttatatca acacaaaccc ttttttagag
     7561 gattttaacg ctcacaaagg cacaaaatta agttctttgg gttctattgt tttagttcct
     7621 atggctattt attctaatga tattaaagat attaaaaata tcccaaatgg tgctaaaatt
     7681 gctattccaa atgatgctac caatgaaagt agagctttgg atttgcttgc taaagctggt
     7741 ttgatcgaat ttaaaacttc aagcactctt aaaaccccga ttaatatcag taaaaatcct
     7801 aaaaatctta aatttataga gctaaaagcc gcacaacttc caagagcttt aaatgatgta
     7861 gatttagcag tcattacgac aaattatgcc cttggcgcag gacttaatcc tctaaaagat
     7921 ggaattttta tagaggataa agacagctta tatgctatag ttctggcagt aagacaaggt
     7981 gatgaaaaaa acgaaaaaag tctaattctt aaagaaattc taaccagtga taaaataaaa
     8041 aatttcatca atgagcaata caaaggctct gttataccta ctttttaatc caagcaaagc
     8101 ctttaaaggc tttgtaaatt tgtattgggt aaaatataaa agattaatac catattaggc
     8161 tggcaatgag aattatatct tttatttttt ttgtttttat tggtttaagc catggtgcaa
     8221 atttagaaga gattaaaact gcacttgcca aagaatttaa aaacaatttt ccaagtttaa
     8281 tcattaaaaa tatcgattta aaaatcacta ctttacctaa agatttcgaa caatatcaat
     8341 ttataagaat agccaatgct cgttttaacc aagcgcaagg atttataagg gctgaattta
     8401 aaaccccaca aaatatacaa aaaaatgtat tttttcgtta ttttatgcaa gcaagtttag
     8461 aagtattaaa aagtgagcgc tctatacaaa gaggagataa acttggcgct tttgactata
     8521 aaagcgtact tatggacttt gataaagttc cctctaacgc tctcgctctt gaagacactc
     8581 acaatctcat agcaaaaagc aatatcagta aaaatactat tttaaaagaa aatatgttta
     8641 aaaccatggc tcttattcgc cgcaatgacc ctataatagg tgttttaagt gatggaaatg
     8701 ttgatgtatt aatagaactc acagccttac acagtgccga tatgggagaa agaattcgag
     8761 caaaaaacaa agagggtaaa gtcatgcaag gtatagttac aggaaaaaat aggatgatta
     8821 tacaatgaaa attttattag gaatttcagg atctagtagt acgcatttag gacttaaact
     8881 tttaaaaaat ttggaaaata aatgcgagct ttattgtatt attactgaag gtgcaaagat
     8941 aagttttgaa gctgaaaata agaaaaactt ggaaaaaatt tgtcaagaac aatttcaaaa
     9001 tatctgtttt ttaaatgata ataacctaag cgcaagtgtt gcaagcggat cttttagtat
     9061 agaaaaaacc atcattgcac cctgctctat ctcgagcctt gctaaaattc acgcaggatt
     9121 agccgacaca cttttgatgc gagctgctgc cgtggctcta aaagaaagaa aaagtttgat
     9181 tttaggagta agagaaatgc ccttttcaac tttaatttta gaacatatgc acaagcttag
     9241 tcaactaggt gttatcatcg cacctcctat tatagcgagc tattctcatg ctagtaattt
     9301 agaacaaatg gaaaatttta ttataggaaa atggctagat cttttaggaa tttctcataa
     9361 tttatacgaa agatggcaga atttttagct taaatttgtt atatttttaa aaatttttgg
     9421 agtaaaaatg acttgtttat atccagggac ttttgaccct attacaaatg gacatttaga
     9481 tgtgattaaa agagcgctta aaatctttga taaagtgatt gtagctatag caaatagcga
     9541 gcataaaaag ccttgtttta gcttagaaca aagaaaggag cttgcaaagc ttactacttc
     9601 acatttaaac aatgtagaaa ttatcacttt tgataatctc cttgtagatt tagccaaaga
     9661 gctcaaagta aataccatag taagaggact tagagcagta agtgattttg aatacgaact
     9721 acaaattggc tatgctaatc acgccctttg ggaagagatt gaaaccattt acctaatgcc
     9781 aaatttaaaa aatgcgttta tctcaagttc tatagttaga tctattgctt cccatggagg
     9841 agatatcagc actttagtcc ctaaagaaat tttacccttt ttaaaggatt tgccttgtat
     9901 gtagtttttg aaggggtgga ttgtgttggt aaaagtacgc aaatttcact tttaaaagaa
     9961 tgttttaaag aagccgtttt tactgcagag cctgggggaa ccaaactagg caatcaccta
    10021 agagagcttt tactttataa accctatcaa cttgacaaaa aaaccgagct tttgcttttt
    10081 ttagctgatc gtgcgcagca ctgtgaggaa attttaaaag caaatcaaga taaactcatt
    10141 attagcgata gaagttttat ttcaggcatg gcttatgcaa aagattttga aaacgaagag
    10201 ctttttagac ttaatgcctt tgctttagaa aatttcttcc cgcaaaaagt tattttttta
    10261 aaaggcgatg aaaatttaat caaagaacgt cttagccaaa aagagcaaga tgctatagaa
    10321 aaacgcggaa ttgattattt cttaagtgtc caagataaac ttgaaaatac tctttatttt
    10381 ttaaaagaaa aaataaatct tcaagtttta accctaaatg caaatgatac aaaagaaaat
    10441 ttacaccaaa aaataaagga ttttttacaa tgattaatgc tctaaaaggt atgaaagatt
    10501 taagcgataa agatgcgcta tattatgaaa aaattatcaa aacttgcgaa gaagttgcaa
    10561 aaaactacgg gtttaatttc atcaatactc cacatttaga gcaaagcata ctttttaaaa
    10621 gaagtgtagg agaaagttct gacatcgttg gtaaagaaat gtatgaattt acagacaaag
    10681 ggggcaatga agtctgtatg cgccctgaag gcacagcagg agtcgtgcgt gcctatatag
    10741 aaaaaaaatt agataaaaac atcagcgtaa agcgttggtt ttatcatggc tctatgtttc
    10801 gttatgaaag acctcaaaag ggtcgcttaa gagaatttca tcaatttgga gttgaaagct
    10861 ttggtatacc tagcgtttat gaagatgcga gtattatttt aatgctagta gaaattttct
    10921 cacgccttag tattgatttc aaacttcaac ttaattcttt aggctgctca caatgcttgc
    10981 caaaataccg cgatgagctc gttgaattct tagattctaa agaaggtttt tgcgaagatt
    11041 gtttgcgtag aaaaaattta aatcctattc gcgttttgga ttgtaaaaat gaatattgtc
    11101 aaaatttgct tgaaaatgct ccacttttaa tcaataattt atgtacctct tgccaaaaag
    11161 actttgaaac actacaacaa attttaaagg ataatggagt taaatttgag ttagattcaa
    11221 aacttgtgag gggcttggat tattattcta aaacggcttt tgaatttata agcgatgaaa
    11281 taggagcaaa agccgccatt gcaggtggag gacgctacga tagacttata gagtatttag
    11341 gtggaaaaag tggctatggt ataggttttg ccatgggtat agaaagaatt atagccattt
    11401 tagaacaaaa agaagagtta gaaaaaagag agggaattta tctttgtgct atggatgaaa
    11461 tttatatccc aaaacttttg caaattgcta ccaagcttag aaaaaaacac aaagtaatct
    11521 taagctatga agctagaaaa cttgccaagc acttagaaaa tggagataag ataaattcaa
    11581 aacattttct ttgcatgggg gaaaatgaag caaaaagcga aagtttgttt tataaaaatt
    11641 tagaaaacaa agatgaaaaa gtgattcaaa tttcagattt ggagaatgct ttatgatgaa
    11701 ttatggaatt gatatctggg gaaatgataa ttttatcatc aaaaatggta aagtttgtat
    11761 caatcacgaa aaaaaacctg ccattatcga tatagtaaaa gagctaagag atgatggata
    11821 taaaggccct ttgctcttaa gatttcctca tttgattcaa aagcaaattg aaagtattta
    11881 tggaagtttt aataaagcaa gaaaggaatt taattataaa ggaaaattca atgccgttta
    11941 tcctttaaaa gtcaatcaat atcctggttt tgtaaaaaat ctcgttcgtt taggtaagga
    12001 ttataattac ggtcttgaag caggttctaa ggctgagctt ttacttgcca tggcttacaa
    12061 taacgaagat gcgcctatta ccgtaaatgg atttaaagat agagagctta tcaatatagg
    12121 ctttatcgca gctgaaatgg gacacaatat caccttaacc atagaaggac taaacgagct
    12181 tgaagccatt gttgatatag ctaaggagcg ctttaagcct aaacccaata taggcttgcg
    12241 tgtgcgtttg cactctgcag gtgtaggaat ttgggcaaaa agcgggggga ttaattctaa
    12301 atttggactt acctctactg aacttataga agctgtaaat ttactcaaag aaaacaagct
    12361 tttagagcaa tttaccatga tacattttca tcttggttcg caaatcactg aaattcatcc
    12421 tcttaaaaaa gccttaaatg aagcaggtaa catctatacc gagcttagaa aaatgggggc
    12481 taaaaattta aaagctatca atctaggtgg cggtttagca gtggaatact cgcaatttaa
    12541 aaatgaaaaa agtagaaatt ataccttaag agaatacgct aacgatgtgg tatttatatt
    12601 gaaaaatata gccgagcaaa aaaaagatct tgagcctgat atttttatag agagcgggcg
    12661 ttttgtcgcg gccaatcacg ccgttttagt cgctcctgtt ttagagcttt tctctcaaga
    12721 atacacagaa agcaagctta tactaaaaaa gcaaaatcca aaacttatcg atgaacttta
    12781 cgatctttac aaaagcataa agccttccaa tgctttagaa tatttgcacg atagtatcga
    12841 tcatttagaa agcatcttaa cactttttga cttaggttat gtggatttgc aagatcgttc
    12901 taatgctgaa attttaacac atttaatcac aaaaaaagcc attttgcttt taggtgataa
    12961 gcaaaatcct gcggatttac ttgctataca agatgaagtg caagaaaggt atttggtaaa
    13021 tttttcactc tttcaaagca tacctgattt ttggggcttg gagcaaaatt tccctatcat
    13081 gccacttgat agacttgacg aagaaccaac aagaagcgca agcatatggg atataacctg
    13141 cgatagcgat ggcgaaattt cgtattctaa aaacaatcct ttatttttgc atgatgtaga
    13201 tgtagaaaaa gaaaattatt ttctaggttt tttccttgta ggagcttatc aagaagtgct
    13261 tggaatgaag cacaatcttt ttacccatcc taccgaagca acgataagtg tcaatgaaaa
    13321 aggctatgaa atcgaaggga ttatagaagc tcaatccata cttgatgctt tagaagatct
    13381 agactatgat atacatacga ttatggatat acttaatgaa cgcattagca attctaagct
    13441 tgtcaatgaa aagcagaaaa aacacatttt aggcgaactt tatcttttct taaatgataa
    13501 tggctattta aaaagcatag gagtataaat gggatttttc ggcattataa aagaagattt
    13561 ttcccaacca aaagtacaag atccagcata taattcttgt atagaacttt ttttcaatta
    13621 cccaggcgta tgggcggtag taaattaccg ctttgcacat tttttttata caaaaaattt
    13681 caagcgcacc gctaggataa tcagcggaat ttcacaattt ttaacaggcg tagatctaca
    13741 tccgggtgca actttaggca gacgcatttt tatagatcat gctaatggag tggtgatagg
    13801 acaaaccgcg gtcatagaag atgatgtttt aatctatcaa ggcgtaacct taggcggaac
    13861 cagccttgaa aagggtatta aacgccatcc taccatcaaa aaaggagtga ttataggctc
    13921 aggcgcaaaa gtacttggta atatcactat aggagaaaat gccaaaatag gctccaatgc
    13981 cgttgttgtt aaagatgtag gagcaaattt aaccgcagta ggaattcctg cttatatagt
    14041 agaagagcgt cgtaaaaaca aggaaaacac aagggctgtt gatgcaaact gcgaagacaa
    14101 gctcgaaaag ctagagagaa aaattgcaga acttgaaaaa gctttatcag atataaaata
//
LOCUS       DBBXOW010000043        14090 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.044, whole genome shotgun sequence.
ACCESSION   DBBXOW010000043 DBBXOW010000000
VERSION     DBBXOW010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14090
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.044"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            1..2103
                     /gene="topA"
                     /locus_tag="ACJE1S_001241"
     CDS             1..2103
                     /gene="topA"
                     /locus_tag="ACJE1S_001241"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HGG0806790.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKEYEVIASKGHIRDLPKSSFGI
                     KIENDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLNTELVEFDKAKIEKLT
                     LTNKDRAKLVFEACKNENYAISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFGKDYLPSKANVY
                     TTKTKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMSPAISQTQ
                     NVFVKNDRAVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGENLKIQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSEVAFSVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKANWQETLKEFYYPFMRKVEEGKTKIASQKTV
                     TKLGENCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKNESKNEAEVSASKAKAKG
                     IGITCPSCKEGEIVERLSKRGKFYGCSAYPKCNFISKYKPSDEKCEECGENLVIKELK
                     KGTFLECLKCKIKKEIKD"
     gene            2106..2942
                     /locus_tag="ACJE1S_001242"
     CDS             2106..2942
                     /locus_tag="ACJE1S_001242"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HGG0806791.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLEASKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPKLSADEALKIISDTKEALPN
                     TVVMVAGGREVVLQERQYEIFKAGAGAIVIGDYLTTKGEEPSRDIVKLKEMGFTFASE
                     CH"
     gene            2923..4098
                     /locus_tag="ACJE1S_001243"
     CDS             2923..4098
                     /locus_tag="ACJE1S_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HGG0806792.1"
                     /translation="MHPSVIDSQGLIDLQILIVIALCLLFSPHIAKILRLPISATEII
                     LGALMAYFGFIGKSENFTILANVGFYYLMFIAGMEVNLRAFFNMDKEIAKKSFFYIIL
                     LYSFSSAIVWVFELSFVFVLIIPVMSVGLLSLLYKDFGKECYWLNTAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSSFG
                     HGFLIPIFFIHIGSTFDLKMILYYKIVLQAFLLMFVMVGLRILCASIFWKKIGFQNMV
                     LFGLSHSMPLTLLIATATLGYSGKVISEELYSALILTALFEAIVVMSAIKFISNIKK"
     gene            4229..5497
                     /locus_tag="ACJE1S_001244"
     CDS             4229..5497
                     /locus_tag="ACJE1S_001244"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HGG0806793.1"
                     /translation="MSNSVTVTDNRNGKSYEFPIYDGTTGPSVVDMGSFYKQTGMFAY
                     DEGLTSTATCKSKITYIDGEEGVLMHRGYPIEWLAENKLFLDVVHLLLYKELPSNERL
                     EAFRYELKKRSYIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVREEYM
                     EMAARVVAKIPTIVAAAYRYKNGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACISAGIGALWGHAHGGANEGVIRM
                     LEEIATVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALQDDYFIQRNLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQETLKIVRPRQLYLGETSKI"
     gene            5571..6335
                     /locus_tag="ACJE1S_001245"
     CDS             5571..6335
                     /locus_tag="ACJE1S_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG0806794.1"
                     /translation="MFKLDNLLKTAIDASNEASKAILKERKNLQIWQKQDQSPLTSAD
                     LASNEILNDILGKTDIKILSEEGLLSQEESKNLQSYWLIDPLDGTSGFLKGSDEFCIM
                     ISLIHEDRPILALIKNPSKGDIFYAHQNTRVYKNDKILDISEQDFIDNQSKALLSVNH
                     LSKEDENFAKKHNLTPINIGSGLKFCAILEGRAGVYKRFEKLNSWDIAAGDFLVNQKG
                     GFMGTFSKEMILYSPLNYKCEPFICVSKKSFLNIYT"
     gene            6372..7133
                     /locus_tag="ACJE1S_001246"
     CDS             6372..7133
                     /locus_tag="ACJE1S_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806795.1"
                     /translation="MKIFLILFMSILLNSSLFANNFSQKKIIKLEQQESFEIIDLQQN
                     VEKQNLDQQKGIFDSSSLMSKKESIRKDNDVDFAIAMSFRQNFGYALDGFNISAKEFS
                     TLFAKNLVDNLRLNFVNSAANGVYQDLRTLARFSPKDSKLLNVSPFLKKEKDKSQIYA
                     KFTDYLVVVNLDDFYVNITNYFVAITKNAVANINFKVVSTSNGKILTSKNVRLNFALH
                     AQDPRVNYQELVNQMPNMLAEVINKELEKLNLTVQ"
     gene            complement(7138..7311)
                     /locus_tag="ACJE1S_001247"
     CDS             complement(7138..7311)
                     /locus_tag="ACJE1S_001247"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806796.1"
                     /translation="MQININLEEMTKWQITYELKRILSSLDPITAHEIAKELRQEFLS
                     IEELQDRIRQIND"
     gene            complement(7420..8196)
                     /locus_tag="ACJE1S_001248"
     CDS             complement(7420..8196)
                     /locus_tag="ACJE1S_001248"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HGG0806797.1"
                     /translation="MIIDFKKYSSVKIGGEFEVEVLEQIREFDGFLIGGANNLLISPK
                     PKNIGILSDNFNFIEILEQNKDFLHLRIGCKTKASQMYRFSKENNLYGFEYLSKIPGT
                     LGGLLKMNAGLKDECISQNLVKIATSKGEILRENIDFSYRFCPLNMPFFWAEFKLGFG
                     FDKIKDENLKNARNNQPSGASFGSIFKNPKGDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFDDAIFLIELAKKKVFEEFGIKLEEEVIII"
     gene            complement(8193..8462)
                     /gene="fliQ"
                     /locus_tag="ACJE1S_001249"
     CDS             complement(8193..8462)
                     /gene="fliQ"
                     /locus_tag="ACJE1S_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HGG0806798.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLIISIFQATTQI
                     NEMTLSFVPKIILVVIVIIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            complement(8474..9337)
                     /locus_tag="ACJE1S_001250"
     CDS             complement(8474..9337)
                     /locus_tag="ACJE1S_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HGG0806799.1"
                     /translation="MKKTITIAHSPDADDIFMYMAIKLGWIGNDFDYKNTALDIQTLN
                     DLALKNEFDATAISFGLYPLIAKEYALLRTAVSFGEGYGPKLIKKQNTHLKRNFKVAL
                     SGANTTNALIFRMKYPEARIIYKNFLEIENAVLSGEVDAGVLIHESILEFDSSLCVEA
                     EIWDIWLELAQENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIANSNRRILAPMLM
                     ERNLIRVNEEKLDTYLNLYANKNSICMSETQFKAVDVLFKLGYDYKFYDKIIHAKDYL
                     IPSEYEEFRNS"
     gene            9447..10478
                     /gene="recA"
                     /locus_tag="ACJE1S_001251"
     CDS             9447..10478
                     /gene="recA"
                     /locus_tag="ACJE1S_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HGG0806800.1"
                     /translation="MDDNKKKSLDAALKSLDKAFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGIPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVDTDNLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKEIQNSMGIEGMIS
                     SSEDEEGEE"
     gene            10478..11722
                     /gene="eno"
                     /locus_tag="ACJE1S_001252"
     CDS             10478..11722
                     /gene="eno"
                     /locus_tag="ACJE1S_001252"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HGG0806801.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVVLSDGSMGTAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVSNVNETIADEILGLDALNQAQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAANALGVPLYRYLGGANASILPVPMCNIINGGAHASNNID
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANLGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKEGKYHMEGKAFSSEDLIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDVFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIELESDEYLGEKL"
     gene            11788..11991
                     /locus_tag="ACJE1S_001253"
     CDS             11788..11991
                     /locus_tag="ACJE1S_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806802.1"
                     /translation="MVFWAFLVIIGAIYFGNMLFGQYSLDTLLSLEATKEELNKKISF
                     LKEQNAKAQKDYFELQGLYPNEN"
     gene            11981..12643
                     /locus_tag="ACJE1S_001254"
     CDS             11981..12643
                     /locus_tag="ACJE1S_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HGG0806803.1"
                     /translation="MKTKILGIFLIFISLLNAEENPFKSEQNMSMIMPPDFQKEDIKF
                     NSNARVLKSVSFNYINLDGSEEVLNVDINKSIDWHDTYTLVRTKSPDPSKVFDVSVTI
                     PERNDSKKESNGTANIEIPLQVDKIYDFISYAVYKNKIKLNTSDELISDFSIGNPSKI
                     VVDFKSDLVNPTKNIRISNSLFKRIDFGSHKGYYRLVIYLDGNYNYNIQKDATGYMIN
                     LL"
     gene            12643..13482
                     /locus_tag="ACJE1S_001255"
     CDS             12643..13482
                     /locus_tag="ACJE1S_001255"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HGG0806804.1"
                     /translation="MRIFVFLWCVSFAFASDILLLSKISEQEIQNKNFNGYLMSEKLD
                     GVRGIWEVGKFKTRQDNPIYTPSYFTYNFPSFKLDGELWIARAKFDEVSALIRGDNLD
                     SSLWKSVTYNVFDVPNACEEFKLTSCTLSNRLKVLEQYLQQNPNPYIKIIKQIPIKDQ
                     EHLKEFYKDIVLNKGEGVVIRKDLAPYEKGRSKNAFKLKPYEDAECKVIGYTEGKGKF
                     QGKIGALLCQMPNDRVIRIGSGLKDKDRENPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRD"
     gene            13529..13606
                     /locus_tag="ACJE1S_001256"
     tRNA            13529..13606
                     /locus_tag="ACJE1S_001256"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13564..13566,aa:Pro,seq:tgg)
     gene            13631..13707
                     /locus_tag="ACJE1S_001257"
     tRNA            13631..13707
                     /locus_tag="ACJE1S_001257"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13665..13667,aa:His,seq:gtg)
     gene            13712..13788
                     /locus_tag="ACJE1S_001258"
     tRNA            13712..13788
                     /locus_tag="ACJE1S_001258"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13746..13748,aa:Arg,seq:tcg)
     gene            13803..13879
                     /locus_tag="ACJE1S_001259"
     tRNA            13803..13879
                     /locus_tag="ACJE1S_001259"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13837..13839,aa:Arg,seq:tct)
     gene            13885..13969
                     /locus_tag="ACJE1S_001260"
     tRNA            13885..13969
                     /locus_tag="ACJE1S_001260"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13919..13921,aa:Leu,seq:tag)
BASE COUNT         4834 a         2034 c         2610 g         4612 t
ORIGIN      
        1 atgaaaaaaa atttgatcat agtcgaatct cctgcaaaag caaaaactat aggcaatttt
       61 ttgggcaaag aatatgaagt catagcttct aaagggcata taagagattt acctaaatca
      121 agttttggta taaaaataga aaatgatgaa tttatccctg agtatagaat cacaagtgat
      181 catagcgcct tagttaaaga acttaaaagc aaagctaaag atgccaaaga agtctatctt
      241 gcaacggatg aagatagaga aggagaggct atagcctatc atattgcaaa agctatagga
      301 aaagatgaaa acaccttacc acgcattgtt tttcatgaaa tcactaaaag cgctatagaa
      361 aatgctttaa aaaatccaag aaaattaaac atgcactctg taaatgctca gcaaaccaga
      421 cgtcttttag atcgcattgt agggtataag ctcagccctt tattaggaca aaaaattcaa
      481 agaggactta gtgctgggcg tgttcaaagt gcggctttaa agatcatagt cgatcgtgag
      541 aaagaaattc gtgcttttgt tcctttagaa tattttagta tagatatgat atttcaaaag
      601 gatttaaata cagaacttgt cgaatttgat aaagcaaaga tagaaaagct tactcttaca
      661 aataaagatc gtgcaaagct tgtttttgaa gcgtgtaaaa atgaaaatta tgctataagc
      721 gatatagaaa gcaaagaaag aaaaatcgct ccgccgcctc cttttatgac ttcaacctta
      781 caacaaagtg ccagcaatcg ccttggtttt aaccctaaaa aaaccatgat gatagctcaa
      841 aagctctatg aaggagtaaa tacccatgaa ggcgtgatgg gggttattac ttatatgaga
      901 accgatagtt taaatttagc caaagaagca gtagaaaatg caagaaaatt catacaagca
      961 aattttggca aagactatct tccaagcaaa gcaaatgtat atactacaaa gactaaaggc
     1021 gctcaagaag ctcatgaagc tatacgccct acaaatttaa gttttactcc agaaattgcg
     1081 gctaaatttt tagacaaaga tgagttaaaa ctttacacac ttatttataa tcgcttttta
     1141 gcctgtcaga tgagtcctgc tatctctcaa actcaaaatg tatttgtaaa aaatgataga
     1201 gcagttttta aaataagcgg tagaaaaatc ctttttgatg gatattataa agtttatggt
     1261 gatatggata aggataaaat tttacccaat tttaaaatag gtgaaaattt aaaaatacaa
     1321 aatttagaaa tgaactcaca ttttaccgaa ccaccttcaa gatattccga agcaggactt
     1381 gtaaaaaaac ttgaaagctt aggcataggt cgcccttcta cttatgcgcc gactatttct
     1441 atacttacaa gccgtgatta tgtaaaaatc gataaaaaac aactcattcc tagtgaagtc
     1501 gcttttagtg taactgaagt gcttgaaaag aatttcagtg atatagtaga tagtaaattt
     1561 acttcaaatc ttgaaaatac tttagatgag attgcagaag ataaagctaa ttggcaagaa
     1621 actttgaaag aattttatta tccctttatg aggaaggttg aagaaggaaa aacaaaaatt
     1681 gcaagccaaa aaacggtgac taaattgggt gaaaattgcc ctgattgtgg tggtgaactt
     1741 gcgattagaa aagggcgttt tggagaattc gtagcttgtt taaattttcc aaaatgcaaa
     1801 tactcaagaa atttaaaaaa tgaaagcaag aatgaagctg aagtaagtgc tagcaaggct
     1861 aaagcaaagg gcataggcat tacttgtcca agttgcaaag agggtgagat agtagagcgc
     1921 ctttcaaaac gcggtaaatt ttatggttgt agtgcttatc caaaatgtaa ttttataagt
     1981 aaatataaac caagcgatga aaaatgtgag gaatgtggag aaaatttagt gataaaagag
     2041 ctaaaaaaag gcacattctt agaatgttta aaatgcaaaa ttaaaaaaga aataaaggat
     2101 taatcatgca aatcatgctt tgtgctattt caaatatagc cagtggaaat tgttctgaag
     2161 attgcaaata ctgcacccaa agcgctcatg taaaaacaga tattcaaaaa tatcgtcgta
     2221 aagaactttc acaaatcgtt ttagaagcaa aaatggcaaa gaaaaatgaa gccttgggtt
     2281 tttgtttggt tacagcagga cttgggcttg atgatgaaaa gcttgagtat gtttgtgagg
     2341 ctgctaaggc tgtgcaaaaa gaagtgccta atttgctttt aattgcctgt aatggtatgg
     2401 caagtgtgga acaactcaaa gaacttaaaa aagcaggaat tttttcttat aatcacaatc
     2461 ttgaagcttc aaaagaattt tttccacaaa tttgcaccac tcatacttgg gaaagtagat
     2521 ttcaaaccaa tttaaatgcc aaagaagcag gacttatgct ttgttgtggt ggaatttatg
     2581 gtatgggtga gagtgaagaa gatagactaa gttttagaaa atcattgcaa gaattgcaac
     2641 ctttttcaac gcctattaat tttttcattg caaatgaaaa tttaaaattg caagttccaa
     2701 aattaagtgc tgatgaggct ttaaaaatta taagtgatac taaagaagct ttgcctaata
     2761 ctgtggttat ggtagcagga ggtcgtgagg tggtattgca agaaagacaa tatgaaattt
     2821 ttaaagcagg tgcaggtgct attgtaatag gagattatct tactacaaaa ggtgaagaac
     2881 caagtcgtga tatagtaaaa cttaaagaaa tgggatttac ttttgcatcc gagtgtcatt
     2941 gattcacagg gtttaattga tctacaaatt cttattgtta tagctttatg tttactattt
     3001 tctccacata tagctaaaat tttgcgctta ccgatttcag ctactgaaat cattttgggc
     3061 gcacttatgg cgtattttgg ttttataggt aagagtgaaa attttactat tttagctaat
     3121 gtgggttttt attatcttat gtttatagcg ggtatggaag tcaatttgcg cgcttttttt
     3181 aatatggata aagaaattgc caaaaaaagc tttttttata tcatattgct ttattctttt
     3241 tcatcggcta tagtatgggt ttttgaactt tctttcgtgt ttgttttgat tattccggtt
     3301 atgagcgtgg ggcttttatc cttgctttat aaggactttg gtaaagagtg ttactggctt
     3361 aatacagcta tgatagtagc aacattagct gaggtgattt ctattgtgct tttgactata
     3421 gcgggagctt ttttgcgcga aggaacaggt attattgatg tagcgcaaag tattttatat
     3481 cttaatatct ttttggggct ttgtttgctt ggatttaaaa tgcttggtgt gcttttttgg
     3541 tggtatcctc agcttaaagt ggtgcttatg ccatgggaag ataaaaatga aaaagatata
     3601 agattttgta tggccatttt tatactgatc attgttgcta tggttattac aaaacttgaa
     3661 atcgttcttg gttcttttat cgcaggttct tttatcgcaa ctttttttga ccataaaaag
     3721 gatttagagc ataaactttc tagttttggg catggttttt taattccgat tttttttatc
     3781 catataggtt caacctttga tcttaaaatg attttatatt ataaaatcgt tttacaagca
     3841 tttttactta tgtttgttat ggtgggttta agaattttgt gtgctagcat tttttggaaa
     3901 aaaattggct ttcaaaatat ggttttattt ggactgagtc actctatgcc tttgactctt
     3961 cttatcgcta ctgctacgct aggatattca ggaaaagtta tcagcgaaga actttattcg
     4021 gcactaattt taacagcttt atttgaagct attgttgtga tgagtgcgat taaatttatt
     4081 tcaaatatta aaaagtaatc taaataacac aggttacttt tttactcaaa aaggttaatg
     4141 aattttaaaa ttattgacaa tgaaaaagtt gaaaatcgcc ttttttagct agaattacta
     4201 aaagtaaaga ttaaataaag gagcaaaaat gtcaaattct gttactgtaa ctgacaatag
     4261 aaatggtaaa agctacgaat tccctatata tgatggtact actggtccaa gtgttgtgga
     4321 tatggggagt ttttataaac aaacaggaat gtttgcttat gatgaaggtt taacttctac
     4381 agctacttgt aaatcaaaaa ttacttatat tgatggtgaa gagggtgttt taatgcaccg
     4441 tggctatcct atagaatggc ttgctgaaaa taaacttttt ttagatgtag tgcatctttt
     4501 actctataaa gaacttccaa gcaatgaaag acttgaagca tttagatatg agcttaaaaa
     4561 acgctcttat atacatgagg gtatgcatcg tctttttgat tctttccctg ataatgctca
     4621 ccctatggcc gttttacaag gcgctgtttc atctcttagt gctttttatc ctgatcattt
     4681 aaatatgaat gttagagaag agtacatgga aatggctgct agagttgtag caaaaattcc
     4741 tactatagta gccgctgctt atcgttataa aaatggtttt cctatggctt atcctaattt
     4801 agatcgtgga tttactgaga actttttata tatgttaaga acctatcctt atgatcatgt
     4861 tgagcttaaa cctatagaag taaaagcact cgatactgta tttatgcttc atgcagatca
     4921 tgaacaaaat gcttctactt ctactgttcg tgccgtaggt tctactcatg cgcatcctta
     4981 tgcatgtatt tcagcaggta ttggagcgct ttggggtcat gctcatggag gtgcaaatga
     5041 aggcgttatt agaatgcttg aggaaatagc tactgttgat agggtggatg aatttataaa
     5101 aagagcaaaa gataaaaatg acccattccg cttgatgggc tttgggcata gggtttataa
     5161 aaattttgat ccgcgtgcaa aagtacttaa aaagcttcgt gatcaattaa tcgatgagtt
     5221 aggtattgat acgaatttga ttaaggtggc aactcgtata gaagagattg ccttgcaaga
     5281 tgattatttt atacaaagaa atctttatcc aaatgtagat tttcatagcg gcttaatttt
     5341 aaaagctcta ggaattccaa atgaaatgtt tgcaacgctt ttcgtgatcg gacgtacacc
     5401 aggctggata gcacaatgga tagagcaaaa agagcaagaa acactaaaaa ttgttcgtcc
     5461 aagacagctt taccttggag aaaccagtaa aatttaaatg attgtgtgaa attaactttt
     5521 tcacacaaac ttcttatata atttcaaaag aatattttga aagtcttaca atgtttaaac
     5581 tcgataattt actaaaaacc gccatagatg ccagtaatga agcctctaaa gctattttaa
     5641 aagaaagaaa aaacctacaa atttggcaaa aacaagatca aagcccctta acatcagccg
     5701 atcttgcttc aaatgaaatt ttaaacgata ttttaggaaa aacagatatt aaaattttat
     5761 ctgaagaagg tttgctaagt caggaagaaa gtaaaaattt gcaaagttat tggcttattg
     5821 atccgcttga tggtacaagt gggtttttaa aaggtagtga tgaattttgc attatgatca
     5881 gtttgattca tgaagataga cctattttag ctcttataaa aaatccttca aaaggcgata
     5941 ttttttacgc tcatcaaaat actagagttt ataaaaatga taaaatttta gatataagcg
     6001 aacaagattt tatagacaat caatctaaag ctcttttaag tgttaatcat cttagtaaag
     6061 aggatgaaaa ttttgctaaa aaacacaatt tgacacctat taacatagga tcagggctta
     6121 aattttgtgc tattttggaa ggtagagcag gggtttataa gcgttttgag aagttaaata
     6181 gttgggatat tgcagctgga gattttttag tcaatcaaaa gggtggtttt atgggaacct
     6241 tttctaagga aatgatttta tattcccctt taaattataa gtgcgagcct tttatttgtg
     6301 tttctaaaaa aagtttttta aatatatata cataaaaaca gcatataatt ttaaaatctt
     6361 aaaggataaa aatgaaaatt tttcttattt tatttatgag tattttgtta aattctagtc
     6421 tttttgcaaa taatttttcg caaaaaaaaa tcattaaact agaacagcaa gaaagttttg
     6481 aaatcataga tcttcaacaa aatgttgaaa aacaaaactt agatcagcaa aaagggattt
     6541 ttgatagctc tagtttgatg agtaagaaag aaagcattcg taaagataat gatgttgatt
     6601 ttgctatagc tatgagtttt aggcaaaatt ttggctatgc tttggatggt tttaacataa
     6661 gtgctaaaga attttctact ctttttgcta aaaatttagt ggataattta agattaaatt
     6721 ttgtaaattc agctgcaaac ggtgtttatc aagatttaag aactttagct cgttttagtc
     6781 ctaaagactc taaattgctt aatgtatctc cttttttaaa aaaagaaaaa gacaaaagtc
     6841 aaatttatgc caaatttaca gactatcttg tggtggtaaa tttagatgat ttttatgtaa
     6901 atatcacaaa ttattttgtt gcaataacca aaaatgcagt agctaatatt aacttcaaag
     6961 ttgtttctac aagtaatggt aaaatactca catcaaaaaa tgtaagatta aattttgcac
     7021 ttcatgcaca agatcctagg gtaaattatc aagaacttgt aaatcaaatg ccaaatatgc
     7081 ttgctgaagt tataaacaaa gagttagaaa aattaaattt aacagtgcaa taaaaattta
     7141 atcgttgatt tgcctaatgc gatcttgtag ctcttctatg cttaaaaatt cttgtcttaa
     7201 ttcctttgcg atttcatgcg cggttatagg atcaagactt gataaaattc ttttaagctc
     7261 gtaagtgatt tgccatttag tcatttcttc taggttgata tttatttgca tgaattatcc
     7321 ttttatcgta agaaaaaatt gtctgattgt agcgtgaatt tgattaaaaa atgctatctt
     7381 tttaaaaaca tatattaaag aaagaagtag aaatttaatt taaatgataa tcacttcttc
     7441 ttctaatttt atgccaaatt cctcaaaaac ctttttttta gcaagttcga taagaaaaat
     7501 agcatcatca aaacttgcat tttttttatt gatcaaaaaa tttgcatgct tgtcgcttaa
     7561 catcgcatct cctttgctaa agcctttaag tcctacagcc tcaatgagtc ttcctgcaaa
     7621 atctcctttt ggatttttaa agatagagcc aaagcttgct ccgctaggtt gattgtttct
     7681 tgcatttttt aaattctcat cttttatctt atcaaaacca aaaccgagtt taaattcagc
     7741 ccaaaaaaaa ggcatattta aagggcaaaa gcggtaacta aaatcaatat tttcgcgtaa
     7801 aatttcacct tttgaagtgg caattttgac taaattctga ctgatgcact catctttaag
     7861 ccccgcattc atttttaaaa gtccaccaag cgtaccagga attttgctaa ggtattcaaa
     7921 accataaaga ttattttctt tggaaaaacg atacatttga cttgcttttg tcttacaacc
     7981 tatgcgaaga tgtaaaaagt ctttattttg ctctaaaatt tcaataaaat taaaattatc
     8041 gcttaaaatt cctatatttt taggcttagg gcttataagg agattgttcg caccgcctat
     8101 taaaaagcca tcaaattcgc gaatttgttc taaaacttcg acctcaaatt cgcctccaat
     8161 ctttacagat gaatatttct taaaatcgat aatcatttga taaaagttgg aatttgattt
     8221 aaaatatttt cggtaaaatc aatcattgtt gtagtcatcc aaggcattaa aaagatgatg
     8281 actattacta ctaagatgat tttaggcaca aaagaaagcg tcatttcatt aatctgtgtt
     8341 gtagcctgaa agatactgat aataagccct gcgataagcc ccgctaaaag catgggcaaa
     8401 gaaagcaaaa gtgtgatttt aaaggtttgc actccaagag caaccaaggt gctttcatcc
     8461 attttaatcc tttttaagaa tttctaaatt cttcatactc gctcgggata agataatcct
     8521 tagcatgtat gattttatca taaaatttat aatcatatcc cagtttaaaa agcacatcca
     8581 ctgctttaaa ttgcgtttcg ctcatgcaaa tggagttttt attggcatat aaattcaaat
     8641 aagtatcaag tttttcctca ttaacgcgga ttaaatttct ttccattagc ataggggcca
     8701 aaatgcggcg attagaattt gctattttta cagcatttgt aagatctctt tctatcttga
     8761 tagcatcgct aagcggcaaa gagcgacgca aagccattcc acccaaaggt agaggtaaat
     8821 tttcttgtgc aagttctagc catatatccc aaatttcagc ttccacacaa agactactgt
     8881 caaattctaa aatgctttca tggattaaaa cccctgcatc cacttcgccg cttaaaactg
     8941 cattttcaat ttctaagaaa tttttataaa tgattctagc ttctggatat ttcatacgaa
     9001 aaattagagc gttggtagtg tttgcgccac ttaatgcaac tttaaaattt ctttttaaat
     9061 gtgtattttg ttttttgata agttttggcc cataaccctc accaaaactt actgcggtgc
     9121 gcaaaagagc gtattcttta gcaattaaag gataaagtcc aaacgagatc gctgtagcat
     9181 caaattcatt ttttaaggct aaatcattta aagtttgtat atctaaagcc gtatttttat
     9241 agtcaaaatc attccctatc catcctagtt taattgccat atacataaaa atatcatccg
     9301 catcgggtga atgtgcgatt gtaattgttt ttttcatagc tttcctaatt tttaatgaaa
     9361 taatttttat tctatcaaaa taaactatta tttaatttta ttttgttaaa attctagcta
     9421 aaaatttgca atttttaagg aaaataatgg acgataataa gaaaaaatcg cttgatgccg
     9481 ccttaaaatc gctcgataaa gcttttggca agggcactat tttaaggctt ggagataagg
     9541 aagtagagca gattgatagc ataggaacag gttctgtagg acttgatctt gcacttggta
     9601 taggcggaat tccaaaagga agaattattg aaatttatgg gcctgaaagt tcaggtaaaa
     9661 caactttaac tttgcatatt atagcagagt gtcaaaaagc gggtggggtt tgtgccttta
     9721 tcgatgctga gcatgctttg gatgtaaaat atgctaaaaa tttgggcgta gatacagata
     9781 atctttatat ttctcaaccc gattttggtg agcaggcttt agagatcgtt gaaaccatag
     9841 cacgaagtgg ggctatagat ttgatagttg tagatagcgt tgcagcactt actccaaaag
     9901 ctgaaatcga aggcgatatg ggagatcagc atgtagggct tcaagcaaga cttatgtctc
     9961 aagcattaag aaagcttaca ggaattgtcc ataaaatgaa tacaaccgtg atttttatca
    10021 accaaattcg tatgaaaatt ggcgctatgg gttatggaac tcctgaaaca acaacaggag
    10081 gaaatgcact caaattttat gcttcagtgc gtttagatgt tagaaaagta gcgactttaa
    10141 aacaaaatga agagcctatt ggtaaccgtg ttaaagttaa agtagtaaaa aataaagtag
    10201 cacctccatt tagacaagct gaatttgatg taatgtttgg agagggttta agccgtgagg
    10261 gtgaattgat cgattatggt gtaaaacttg atatagtaga taaaagtggt gcttggtttt
    10321 cttataaaga taaaaaattg ggtcaaggta gagaaaattc aaaagctttc ttaaaagaaa
    10381 atccagaaat agctgatgaa attaccaaag aaattcaaaa ttctatgggt atagaaggca
    10441 tgattagcag tagcgaagat gaagaaggag aagaataatg ttagtaattg aagatgttag
    10501 ggcatatgaa gtgcttgata gtagaggaaa tccaactgta aaagcagaag ttgtacttag
    10561 tgatgggagt atgggtacag ctatagttcc aagtggtgca agtacaggtt ctaaggaggc
    10621 tttagaactt cgtgataatg atgaaagatt tggtggaaag ggtgttttaa aagcagtttc
    10681 taatgtaaat gaaactatag ctgatgaaat tttaggactt gatgctttaa atcaagctca
    10741 gcttgatgat actttgcgtg agcttgatgg aacaaataat tactcaaatt taggtgcaaa
    10801 tgcgaccttg ggagtatcta tggcaacagc gcgtgcggcg gcaaatgctt taggagtgcc
    10861 tttgtatcgt tatttagggg gtgcaaatgc gagtattttg cctgtgccaa tgtgcaacat
    10921 catcaatggt ggcgcccacg caagcaataa tatagacttt caagaattta tgatcatgcc
    10981 ttttggtttt acaagcttta aagaagcttt gcgttcagtt tgtgaaattt atgcgatctt
    11041 aaaaaaagag cttgcaaatt taggacattc tacagctttg ggcgatgaag gaggctttgc
    11101 tccaaatttg gctaacaata cagagcctat tgatctttta atgacttgta ttaaaaaagc
    11161 aggttatgaa aatcgtgtta aaatcgctct tgatgtggca agtactgaat tttttaaaga
    11221 aggtaaatac cacatggagg gcaaagcttt ttcaagtgaa gacttaattg aacgctatgt
    11281 ggagctttgc gcaaaatatc caatttgcag cattgaagat ggtttagctg aaaatgattt
    11341 tgagggctgg atcaagctta ctgaaaaatt aggcaataaa attcagcttg tgggcgatga
    11401 tttatttgta acaaatgaag atatcttaag agaaggcatt atcaaaaaaa tggcaaatgc
    11461 tgtgcttatt aaaccaaatc aaatcggaac tattactcaa actatgagaa ctgttcgttt
    11521 agcacaaaga aacaattata agtgtgtgat gagccataga agtggcgaga gtgaagatgt
    11581 tttcatagca gattttgctg tagctttaaa tacaggacaa atcaaaacag gggctttggc
    11641 aagaggcgaa agaactgcaa aatacaatcg cttgcttgaa attgagcttg aaagtgatga
    11701 atatttagga gaaaaactct gagtgattta ctcaaagaat atgacgaaag caccaagaaa
    11761 aagagctttt atgcccatct tataaagatg gttttttggg cttttcttgt cattatagga
    11821 gctatttatt ttggaaatat gctttttggg cagtattctt tagatacctt gctttcactt
    11881 gaagcaacca aagaagaatt gaataaaaaa atatcttttc tcaaagagca aaacgccaaa
    11941 gcacaaaaag attattttga attacaagga ttatacccca atgaaaacta aaattttagg
    12001 aatattttta atttttattt ctttattaaa tgctgaggaa aatcctttca aatcagagca
    12061 aaacatgagt atgattatgc cacctgattt tcaaaaagag gatattaaat ttaattctaa
    12121 tgcaagagtt ttaaaaagcg taagttttaa ttatattaat cttgatggaa gtgaagaagt
    12181 attaaatgtt gatattaata aaagcataga ttggcacgat acttatactc ttgtccgtac
    12241 taagagccca gatccttcaa aagtttttga tgtttcagta actatacctg aacgtaatga
    12301 ttctaaaaaa gaatccaatg gtacagcaaa tatagaaata ccgctacaag ttgataaaat
    12361 ttatgatttt atatcttatg cagtgtataa aaataaaatc aaactcaata ctagtgatga
    12421 gcttattagt gatttttcca taggtaatcc tagtaaaatt gtagtggatt ttaaatcaga
    12481 tctagtaaat cctactaaaa acatacgcat tagtaattct ctttttaagc gtatagattt
    12541 tggctctcat aaggggtatt atagacttgt gatatatttg gatggaaatt ataattacaa
    12601 tatccaaaaa gatgctacag gatatatgat caatctattg tgatgagaat ttttgttttt
    12661 ttatggtgtg ttagttttgc ttttgctagc gatattttac ttttaagcaa gataagtgaa
    12721 caagaaattc aaaataagaa ttttaatggc tatttaatga gtgaaaagct tgatggagtc
    12781 agaggaattt gggaagtggg aaaatttaaa acccgccaag ataatccaat ttatactcct
    12841 tcttatttta cttataattt tcctagcttt aagcttgatg gggagctttg gatagctagg
    12901 gctaaatttg atgaggtgtc agctttaatt cgtggcgata atctagactc aagcctttgg
    12961 aaaagtgtta cttataatgt ttttgatgta cccaatgctt gtgaagaatt taaactcact
    13021 tcttgtactt taagcaaccg ccttaaggtt ttagagcagt atttgcaaca aaatcccaat
    13081 ccttatataa aaatcataaa gcaaattcct ataaaagatc aagagcattt aaaagaattt
    13141 tataaagata ttgtcttaaa taagggcgaa ggtgtagtta tacgcaagga tcttgctcct
    13201 tatgaaaaag gcagaagtaa aaacgctttt aaattaaaac cttatgaaga tgctgaatgt
    13261 aaagtcatag gttatactga aggtaagggt aaattccaag gtaaaatcgg cgctttactc
    13321 tgtcaaatgc caaatgatag ggtgattaga ataggcagtg gtttaaaaga taaagatagg
    13381 gaaaatccac ctaaaatagg ctctattgtt acttataaat ttaatgggtt gactaaaaat
    13441 tccttaccgc gttttccagt ttttttacgc ataagggatt aaaattcttg actttgtttt
    13501 ctttttctga tataatacct acttttttcg gggtgtagcg cagtctggtt agcgcacttg
    13561 gtttgggacc aaggggccga aggttcgaat cctttcaccc cgaccatttt ttataaattt
    13621 atacaaaatg gtgagtgtag ctcagtcggt tagagcatca gattgtggtc ctgagggtcg
    13681 tgggttcaat tcccatcact caccccacta agcgttcgta gctcaactgg atagagcaac
    13741 agacttcgga tctgtaggtt atgggttcaa ttcctatcgg gcgcaccacc aaatttttat
    13801 atgcgttcat agctcagctg gatagagcaa cggccttcta agccgtaggt cagaggttcg
    13861 aatcctcttg agcgtaccat actagcggat gtggtgaaat tggcagacac gccagactta
    13921 ggatctggtg cagcaatgcg tgaaggttca agtcctttca tccgcaccac aatttaaaat
    13981 tatatctccc ttaaattagc gcaatcgtct ttttctttac aaaataaaaa atttcatttt
    14041 gttttaaatt ttatttcgat ttttagaaaa ttaatcattt ttattaaaaa
//
LOCUS       DBBXOW010000044        13829 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.045, whole genome shotgun sequence.
ACCESSION   DBBXOW010000044 DBBXOW010000000
VERSION     DBBXOW010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13829
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.045"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..696
                     /locus_tag="ACJE1S_001261"
     CDS             <1..696
                     /locus_tag="ACJE1S_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HGG0806805.1"
                     /translation="FSIKNIQLDKQHELIFEIAEIANDLALKIQDNDVQHKNDLKQIL
                     TKLFQYVKIHFKDEEKFMESIDFPLIEEHRKSHQILLKKTKELLEHSNDIVKMSFELS
                     TLTKDWILDHFANEDLWIANFTKKALHLQEIHYNLEQYIKLKSIRQDLKTEKTYDYIC
                     NCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQN
                     HHFTTQKNDMGGG"
     gene            697..2568
                     /locus_tag="ACJE1S_001262"
     CDS             697..2568
                     /locus_tag="ACJE1S_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein A"
                     /protein_id="HGG0806806.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFKVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADNFFVKNYNTIVQKFLIEIYPKKQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDINEECFDENINYDEGIYCKPVEKNELLFEYIY
                     RVLGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHS
                     GYSVINNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GSIGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPSTIEMKFSNLY
                     HDIIKKYNHLSISYKKLIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTKLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEKIKIIFEKLEKDNS"
     gene            complement(2572..4209)
                     /locus_tag="ACJE1S_001263"
     CDS             complement(2572..4209)
                     /locus_tag="ACJE1S_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HGG0806807.1"
                     /translation="MMTSFYNGVSGVKTNSFGIDVYANNIANVNTTGFKYSDAQFKDI
                     FYSTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASEGEFDVALQGKGFFGVLGADGE
                     AYYTRNGAFRRDAAGNLVDSYGNFVLGTMNPAFAGVSYSDRVAGLMGDYLNTGTPVNS
                     GFTVNSNDAFNIGTTASQGVIKVPVNMYLPPQVTQNVKWSGSLNTNATTEVVKVDLDP
                     AKFNVQKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNVDGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKEGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(4213..5073)
                     /locus_tag="ACJE1S_001264"
     CDS             complement(4213..5073)
                     /locus_tag="ACJE1S_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HGG0806808.1"
                     /translation="MLTSSDWTMTNTNTNTAATTTSTSTTSDTSSTSSSGLVSNPNAT
                     LDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQLL
                     SNSFSTSMSTSAIGAIGKMATVSDNKIKLTGSDEIIALKMYLPEDSDENGVTLEVYDS
                     NNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTIKMVYNNKNGEKITANYG
                     TYPIEGIVFKEGIAYAKMAGQEVPFDAISEITDYKLSSSSSTGSGSSGSGSSGDSSGS
                     TEDSDEEEKA"
     gene            complement(5131..7095)
                     /locus_tag="ACJE1S_001265"
     CDS             complement(5131..7095)
                     /locus_tag="ACJE1S_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HGG0806809.1"
                     /translation="MSNLTPSNDILNLTPSNTNTTHSSSSKTKEQDLKKSDNTTQDDT
                     ESFLNSLLNSIEETNEFLPDHMKISKKEVVNEAMDKLQNGVFSESDKISIFESASFMQ
                     ILSLLDKLKADTADIKLANLSIQLSQLVKTEANFNALKSASNLSELLNIAKDLGLNVK
                     NIKVDRLLDLKATFPNLDKANFFKGAVDNVFKEIINNKLAHISKNLNQNVQNLNHTPH
                     ANLSQNSKMTKKDDTSLLSQTLKNLDAIISSKKEKNEVKNDNVKIQTDGETAELKNTS
                     KNLTHSESLKELEQENLTNNDKKIPSQEVQNKEQSKEFKNDKNTLLNESLKKDDKELK
                     NANKANVQDLTPSKNNTTQDKLPMQDKVSARDKALTQEKIIPQDKVSTQEKTLPQDKV
                     LIQEKPLNNKEGLNQETNNIKNIKDLNQALDKNNNLSENPKEQVKNENTNFNKTSNKE
                     NVRDSQNLSLNLSPKDLNLNKDNTNFTHYTNKENYTQEQGKIQSENTEKNPLDDLNSL
                     VKDLNKISQNNTKNITPKETLQHFSQDLKAAMEQYKAPITKLSITLNPHNLGEVEVTL
                     VQRGNNLHINFNSNTNAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQGK
                     NRSGYGFKDALDGKNESEKVNLELVLAKYF"
     gene            complement(7109..7432)
                     /locus_tag="ACJE1S_001266"
     CDS             complement(7109..7432)
                     /locus_tag="ACJE1S_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806810.1"
                     /translation="MSKPLNTEFFIELDTPVINRKSEVLLQVLDLLETLKSNQNEKMA
                     RISSELTELLENEENLEKITRAQNLEELLDILVALNEDKMIKVYENAYLKERFPHLAS
                     SQFLK"
     gene            7561..9369
                     /gene="typA"
                     /locus_tag="ACJE1S_001267"
     CDS             7561..9369
                     /gene="typA"
                     /locus_tag="ACJE1S_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HGG0806811.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPQNVRVRKRYLDPTQRKRMEKAKS"
     gene            9369..10019
                     /locus_tag="ACJE1S_001268"
     CDS             9369..10019
                     /locus_tag="ACJE1S_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HGG0806812.1"
                     /translation="MDLKSLENKRLYILKRLGILKFLSVVEALLVGFLAFVFTKDILI
                     ALILAVFVGIFFFRLTAKKLKLAKKELEIDALNLFLRRFGAKFRKESLSQKDFLKLEL
                     SENLKDFKSQNCFEFKEFKIYDINFIDENKRFFCGILLEILKPSKNPSFEDEEKIYVK
                     LQDKNFTLNHIFSKDNHYLIATLTNPFFIDLKESLEKNFKNLENNLKLIEEKIIKI"
     gene            complement(10016..11365)
                     /locus_tag="ACJE1S_001269"
     CDS             complement(10016..11365)
                     /locus_tag="ACJE1S_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HGG0806813.1"
                     /translation="MSNLNQNEQIKCPNCGIFIDISTALYAQILDKAKQEMLKQKKEF
                     EDEVNAKRAEYTKAFNDLKAQKLEQEKLISEQVSQKLLLEKQKFEQELLTQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENEKLKREQKENEERLKFEVKEE
                     AFKEFKEQEGKKLELEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQNEYIGDEVKEVPKGVNGADCLHIVKDSFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKQKTHFKEGILICTFAEFKGVL
                     AVLRESIINSYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGLKSLENLAKDED"
     gene            11471..12679
                     /locus_tag="ACJE1S_001270"
     CDS             11471..12679
                     /locus_tag="ACJE1S_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HGG0806814.1"
                     /translation="MQKHTKIHGFSKLKLVIILALMSSIAPLSTDMYLPALSHVEQSF
                     HTSKALTQLSLASFFVAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDNI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGSF
                     LLEYFSWHSIFTTLFALGILLFLMILFGLKESAPHLKNKKFSHKEAMKSYKFVLKDKR
                     FLTYVFCAALALAAMFAYITGSSFVFTEFFDLSEQQFGMLFGANALGFVICANINARL
                     VRKFESEKILSKALMIMFVSTLILLINAFLYPNLFLFEASIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGFIQFALAGLISSVVSALDANTPIILACVMCACVLVANMIYF
                     LGKKNPKGKI"
     gene            12676..13377
                     /locus_tag="ACJE1S_001271"
     CDS             12676..13377
                     /locus_tag="ACJE1S_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HGG0806815.1"
                     /translation="MKTNSLFISVAVVLASVILAFGFNKALSDFKTLERSVTVKGLSQ
                     KDVEADTLILPIKFTRSGNNLANLYEELESDKQNIIRFLEEQGVKSDEISYNSPNIID
                     RLSDPYSNDTQATYRYIGTANLLIYTKNIKLGKSILEKISSLGKLGIVTKIEDYEIEY
                     LYTKLNEIKPQMIEEATLNARNSAIKFAQDSNSSLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(13407..>13829)
                     /locus_tag="ACJE1S_001272"
     CDS             complement(13407..>13829)
                     /locus_tag="ACJE1S_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806816.1"
                     /translation="NSSQLINPFTGVFSSGKLYESQFEKSLNDLNASAIVNLASILQN
                     DFNLHLKDQNISFTELNSAKALIIANKENLLKLNDVNSNITKEVLGEKYTELLKIINQ
                     DKITENTIKSTSVLYSIILLLCIFSLQKTARKNSIVPS"
BASE COUNT         4522 a         2305 c         2161 g         4841 t
ORIGIN      
        1 tttagcatta aaaacataca attagataaa caacacgaac taatttttga aattgctgaa
       61 attgcaaacg atttagcttt aaaaattcaa gataatgatg tgcaacacaa aaatgattta
      121 aaacagattc ttacaaagtt attccaatat gtaaaaattc atttcaaaga tgaagaaaaa
      181 tttatggaaa gcattgattt tcctttgatt gaagaacata gaaaatctca tcaaatatta
      241 ttaaaaaaga ctaaagagct tttagaacac tcaaatgata ttgttaaaat gtcatttgaa
      301 ctttcaacat tgaccaaaga ttggatttta gatcattttg ctaatgaaga tttatggata
      361 gctaacttca caaaaaaagc tctacatctt caagagattc attataatct agagcaatac
      421 ataaaattaa aatcaattag gcaagattta aagactgaaa aaacctatga ttatatttgc
      481 aattgttctt tgcgtatcca tgcagttcca cagactatac atcaagagct tgttagcaaa
      541 gaaaatacct taaagtgcga aaaatgtggg caaattttag ttcatttgga ttattttgat
      601 ttgaatcaaa atttcgaaaa attcaatgct atttttgaag atgcactaca aaatcaccat
      661 ttcacgactc aaaaaaatga tatggggggg ggatagatga attttcaagt aaaaacctta
      721 gaaactttca atcctttcga aagtttaaat cacgaacaag caaacacaga acaaattctt
      781 gattttaaag ttatagattt taaacttctg tgttctagtg taaaaccagc gaaaacaaaa
      841 acttatgaaa gaaaggattt tgacttattt tatgcagata atttttttgt aaaaaactac
      901 aataccatag tgcaaaaatt tcttatagaa atttatccaa aaaaacaaag ttttcctttt
      961 acagtcaaac ttagatccaa ctccaaccta acccatctaa aagccagtat caaccttaca
     1021 gaaaatttta aatattaccc taatttaaaa tttgatattt tgcaaaatat ctacaaaata
     1081 atgatcaaac aaaaattttt aatcttaaga cttgataaaa atttatttga caagattgat
     1141 gattttatct tatcaataca aaaaagtcca tctattaaag aaatagagct tgaaattgcc
     1201 aaaggtgtag ataagattga acataaaagt gatgaaatta tttatcatag agatattaac
     1261 gaagaatgtt ttgacgaaaa tattaactat gatgaaggaa tctactgcaa acccgttgaa
     1321 aaaaatgaat tacttttcga atatatttac agagttcttg gcaaagaagg aagaaatcta
     1381 agaggagaga tacttcattt aaatccaata gcctttcttg ataatccttt tatcataaaa
     1441 gatgaaagca tttacacaga agaattagaa gatagaatta aatattttag cgccaattat
     1501 ggatttttaa ataaagacca ctcaggatat agcgttataa acaatttaaa attatcacaa
     1561 atagggctta aaacaaccgg ttcaatcaaa acaaataccg atgaaaatat aaacttagaa
     1621 atcactaatt ttgatataag tgatgatgct attaaatcag gtattgtaaa tgttcaagct
     1681 tcaaatataa aagtaaatgg gagtattgga gcaacaaaac tttatggaaa aaatatcagc
     1741 ataaaaggct taactcatgc aaaaagcgaa atttttgcac aagatatttt tattacaaca
     1801 cacaaaggaa ctttgcaggc tgacactgta tatataaaaa atttagaaaa tgggacaatt
     1861 atagctaaaa atgtatttgt tgaaaactgc atgggtggaa aaatagaagc agaaaatatt
     1921 tatatttgca atttactaac ggataatact ttatatccaa gaaaaaatct aatcataaca
     1981 aacaatataa aatttaaaaa caatatcgta gtttcaccac tagtttctat tgaaaacaac
     2041 tcagatacag aatgcgaaaa tcttaaaaat ctaagcctta aaataaaaag taagcttgat
     2101 gacaccataa gcaaaatgca aaattactat gattatctaa tcaaaaatca aatcaaaatc
     2161 atcaaacttc aaaagactaa aaatcctagc accatagaaa tgaaattttc aaatctttat
     2221 cacgatatca taaaaaaata caatcatctt agcatttcgt ataaaaaact tataaaatta
     2281 aaatatcaaa ttgatgcgaa attaaatttc ttaaatgaaa tggtttacaa tgtaaaaata
     2341 tacataaaag ccgaaaatat cggagaggat aattttttaa aattttatcc taacacaaac
     2401 accaagcttg aactaaaaca tcatataaat ttaaaagact atgaaaaggt tttatatctt
     2461 gaaaaaggac agcaagtaag ttatattaaa tcaagccata attatagcga aagcgacata
     2521 gaaaaaatta aaattatttt tgaaaaatta gaaaaagata attcctaaga attatctttt
     2581 catattaatg gctttttgta tcatctgatc acttgtagtg atactttttg agcttgcatc
     2641 aaaggctttt tgagttacga taaggtttga aagctctgcg cttaaatcaa catttgattg
     2701 ttctaagaat ccgcctttaa atttagctgt attaacaact tgaccatctt tcataataaa
     2761 acttgcatct ccgctattgg ctgttgctgc aaaaatatta tctcccatag caaccaatcc
     2821 ttgctcattg ataaaattat ataaagcaag ctttccaact atggcatttt taccattgct
     2881 aaattgcgca acaatacttc catcatcgga tatattatat tgttcaaaaa acccttcagc
     2941 tacaccatct tgttgtgtaa ctacattttt ttcgacgcct tctttaatat aaatcccact
     3001 ataacccgaa ccaggcttgt tagcatcata aggagaacct aaatcaatat taattgttcc
     3061 accatttgga tttgcaatgc ttgtaatatt gttttgaagc aaagcaccat ttttatcaaa
     3121 aaccatattt ccttcagtcg gattgcctac ggcattgcca ttagaatcat aaatttgtgc
     3181 aatagcttta tattgtatat tatcgccttc ttgcggtaaa actctttcaa gtgtaaccct
     3241 taaagtgctt ttacttccat ctacattata aataggggat tctaaaatat ctttattggc
     3301 tttttgttgc tctgttgaaa tttgagctgt atcaagcttg atactatttt catccaatcc
     3361 ttttaaatca agctcgttac ttttaaaatt tagattttca tctaaagtcg cttcaaagct
     3421 tgtttttacg ccattatcat cagtgaaatt taaaataatc ctatcacccg ctttagcact
     3481 aaacacatct tctttgctaa cactaccact aactacatat ttgccatctt cagtcttttg
     3541 gacattaaat ttcgcaggat caagatcgac tttaaccact tctgttgttg cattcgtatt
     3601 taaacttcca ctccatttta cattttgagt tacttgcgga ggcaaataca tattcacagg
     3661 aactttaatc actccttgtg aagccgttgt ccctatgtta aaagcgtcat ttgaatttac
     3721 ggtaaagcca ctatttacag gagttcctgt gttaagataa tcccccataa gccccgcgac
     3781 tctatcacta taactcactc cagcaaaagc aggattcata gttcctaaaa caaaatttcc
     3841 ataagaatct accaaatttc cagcagcatc tcttctaaag gctccatttc gggtataata
     3901 agcttctcca tcagcaccca aaacaccaaa aaaacctttt ccttgaagtg ccacatcaaa
     3961 ttcaccctca cttgctacag gtgaaccttg ttcaaaaacg acttgagaag aagccgcacc
     4021 acttccatag cctccttggg cagggttagt ggattgggtt gttatggtgc tataaaaaat
     4081 gtctttaaat tgcgcatctg agtatttaaa gcctgtggta ttgacatttg cgatattgtt
     4141 cgcataaaca tctataccaa agctattggt tttaactcct gaaacgccat tataaaatga
     4201 agtcatcatg gcttaagcct tttcttcttc atcgctatct tctgtagatc ctgaagaatc
     4261 tccgcttgaa ccacttcctg aactaccgct tcccgtgcta gaagaagagc ttaatttata
     4321 atcagtgatt tctgatatag catcaaaagg aacttcttga cccgccattt ttgcataagc
     4381 aataccctct ttaaaaacaa ttccttctat agggtaagta ccataatttg cagtgatttt
     4441 ttcgccattt ttattgttat aaaccatttt aatagtatac tcgccatcac ccgcataaac
     4501 accatcgtta tttcttcctg gccactccat agtaaataaa ccttgagaaa tagatttagc
     4561 atcacttttt tcactaaata caagcttgtt gttgctatcg tatacttcca aagtaacccc
     4621 attttcatcc gaatcctcag gcaaatacat tttaagcgcg ataatctcat ctgaacctgt
     4681 aagcttgatt ttgttatctg aaacagttgc catctttcct atagctccga tagctgaagt
     4741 actcatactt gtgctaaaag aatttgaaag taattgcata gtttcaacca ttttttgcat
     4801 ggtagtattt gtattttgtt gcatttcaag tgctgataat tgagaagttt gcgtaagcat
     4861 tttatcacta tccataggat cagttggatc ttggtgctga agctcgatca aaagaagttt
     4921 taaaaacgca tctttatcaa gcgttgcatt tggattagaa acaagacctg aactactggt
     4981 tgaacttgta tctgaagtag tacttgtgct agtggtggta gcagcagtat tagtatttgt
     5041 atttgtcata gtccaatctg atgaagttaa cattataaac tcctttttat atttaagtct
     5101 ttttttaata aaagcaataa gtgttccaac ttagaaatac ttcgctaaaa caagctctag
     5161 attgactttt tcactttcat tttttccatc taaagcatct ttaaaaccat atccgcttcg
     5221 attttttcct tgattttgat tttgctctct tttaccttga tcgctaaaat tcatttcaag
     5281 tccagtaaat cccatattta caagagaatt tttaaactcg gcttgatttt gaataaataa
     5341 attcattgca ttggtattgg aattaaaatt aatatgaaga ttgtttcctc tttgtaccaa
     5401 agttacctca acttctccaa gattgtgagg atttagcgtg atactaagct tggtgattgg
     5461 ggctttgtat tgctccattg ctgcttttaa atcctgcgaa aaatgttgta aggtttcctt
     5521 aggagtgata tttttagtat tgttttgtga aattttattt aaatctttca ctaaagaatt
     5581 taaatcatct aaaggatttt tttcggtatt ctcactctgt attttacctt gctcttgtgt
     5641 ataattttct ttattagtgt agtgagtgaa atttgtattg tctttattga gattaagatc
     5701 ttttgggctt aaattcaagc tcaaattttg agaatctctt acattttctt tgttggaagt
     5761 tttgttaaaa tttgtatttt cgtttttaac ctgttcttta ggattttcac ttagattatt
     5821 atttttatcc aacgcttggt ttaaatcttt tatatttttg atattgtttg tttcttgatt
     5881 taaaccctct ttgttattaa gaggcttttc ttgtatcaat actttatctt ggggcaaggt
     5941 tttttcctgt gttgatactt tatcttgtgg aattatcttt tcttgagtta atgctttatc
     6001 tcgtgctgat actttatctt gcattggcaa cttatcttgt gtggtattat ttttgctagg
     6061 tgttaaatct tgcacattag ctttatttgc attttttaat tctttatcat ctttttttaa
     6121 agactcattt aagagtgtat ttttatcatt tttaaactct ttgctttgtt ctttattttg
     6181 cacctcttgg cttggaattt ttttatcatt gttggttaaa ttttcttgtt caagctcttt
     6241 taaagactcg ctatgagtta aatttttaga agtatttttt aattctgctg tttcaccatc
     6301 tgtttgaatt ttaacattat cgtttttaac ttcatttttt tcttttttgc ttgaaatgat
     6361 agcatctaaa ttctttaaag tttgagaaag caaagaagta tcatcttttt ttgtcatttt
     6421 agaattttga ctaagattag catgtggagt gtgatttaaa ttttgcacat tttggtttaa
     6481 atttttactg atatgagcaa gtttattgtt tataatctct ttaaaaacat tatccactgc
     6541 gcctttaaag aaattagcct tatccaaatt tggaaaagta gccttaagat ctagcaaacg
     6601 atctactttg atatttttta catttaagcc caaatcctta gctatattta aaagctcgct
     6661 aagattgctt gcgcttttta aagcattaaa attagcttct gtttttacaa gttgagaaag
     6721 ctggatggaa agattggcaa gtttgatatc ggccgtatct gcttttaact tgtcaagcaa
     6781 agataaaatt tgcataaaag aagcagattc aaaaatactt attttatcac tctcgctaaa
     6841 aaccccattt tgtaatttat ccatagcttc attaacaact tcttttttac tgattttcat
     6901 atgatcaggc aaaaactcat ttgtttcttc gatagaattg agtaaagaat ttaaaaaact
     6961 ctctgtatca tcttgtgttg tattgtcaga tttttttaaa tcctgctctt tagttttgct
     7021 cgatgaacta tgggttgtat ttgtattgct tggagtaaga tttaaaatgt cattacttgg
     7081 ggtcaaattt gacatgatgg ttccttaatt attttaaaaa ttgacttgac gctaaatgag
     7141 gaaatctttc ttttaaataa gcattttcat atactttgat catcttatct tcatttaaag
     7201 caactaaaat atccaaaagc tcttctaaat tttgagccct cgtaattttt tcaagatttt
     7261 cttcattttc caaaagctct gtaagctcgc ttgatattct tgccattttt tcattttgat
     7321 tagattttaa agtttctaaa agatctaaaa cttgaagcaa tacttcactt tttctgttga
     7381 ttactggagt atcaagttct ataaaaaact ctgtatttaa tggttttgac attttaactt
     7441 cctttttaaa aatgatatct agacaaacta gaagcaagaa tcgttccaac ttttgctttt
     7501 tgaaaaatta agcaaaagtt ctatataatt ttggctttga atttaaattt ggagagcatc
     7561 ttggaaaata ttagaaatat cgcagttata gcccacgttg accatggtaa aaccactatg
     7621 gtagatgaac tactaaaaca atcaggtact tttagtgaaa gagaacaaat ttcagaacgc
     7681 gttatggata gtaacgatat agaaaaagaa cgcggtatca ccatactttc aaaaaataca
     7741 gctatcaatt ataaaggcac aaaaatcaac atcatagaca ctccaggcca tgccgatttt
     7801 ggtggagaag tagagcgtgt tttaaaaatg atcgatgggg ttttgctctt agtcgatgcg
     7861 caagaaggcg ttatgccaca aactaaattc gtggttaaaa aagccctatc tttaggacta
     7921 aaacctatag ttgtaatcaa caaaatcgac aaaccagctg ctgatcctga aagagtaatc
     7981 aacgaaattt tcgatctttt tgtagcttta gatgcaaacg atgagcaact tgactttgct
     8041 atcgtttatg ctgcagcaaa aaatggttat gctaagcttg atctaaacga tgaaagcgac
     8101 aatatggagc ccctttttaa aaccatactc gagcgcgttc cagctccaag cggtactaat
     8161 gacaatcctt tacaacttca agtctttact ttaggatatg ataacttcgt aggtaaaata
     8221 ggcattgcta gaattttcaa cggcgttgta aagaaaaatc aaagtgtaat gctcgcaaaa
     8281 gccgatggta ctaaagtaaa tggtagaatt tcaaaactca tcggttttat gggcttagaa
     8341 aaaatggata tagaagaagc aggcagtggc gatatcgttg cgatcgcagg ttttgaagct
     8401 ttagatgtgg gcgatagcgt tgtagatcca aacaatccta tgccacttga tcctttacac
     8461 atcgaagaac caaccttaag catagtattt tcagtaaatg atggtccctt agcaggaact
     8521 gaaggaaagc atgtgacttc aaacaaaatc gctgaacgct tagaagctga aatgaaaacc
     8581 aatatcgcga tgaaatacga aagcacaggc gaaggcaaat ttaaagtaag tggtaggggc
     8641 gaacttcaaa tcactatttt agctgaaaat atgcgtcgtg agggctttga gttttgcatg
     8701 ggaagacctg aagttatcgt aaaagttgaa gatggggtta agacagaacc atttgaacat
     8761 ttagttatcg atgtgcctga agaatttagt ggtgcagtga tagaaaagct tggaaaaaga
     8821 aaagctgaaa tgaaaactat ggcacctaca ggcgatggac aaacaagact tgaatttgaa
     8881 attcctgcac gcggacttat aggctttaga tctcaatttt taaccgatac caaaggcgaa
     8941 ggcgtaatga accatagctt tttagaattc cgccctttta gtggtgcagt tgaaaagcgt
     9001 aacaatggtg ctttgatctc tatggaaaat ggcgtggctt tggggtattc tttgtttaac
     9061 cttcaagagc gcggggtgct tttcatagaa cctcaaacca aagtatatac agggatgatt
     9121 ataggtgagc actctcgtcc aaatgactta gatgttaatc ctatcaaagg aaaaaatctt
     9181 accaatgtaa gagcaagcgg aagcgatgat gcgatcaagc ttgtaccgcc tagaaaatta
     9241 agccttgaaa gagctttaga gtggatagaa gaagatgaac ttgtagaagt tacacctcaa
     9301 aatgtgcgtg ttcgcaaacg ctatcttgat ccaactcaaa gaaaaagaat ggaaaaagca
     9361 aaatcttaat ggacttaaaa agcttagaaa ataaaagact ttatatactc aaacgcttag
     9421 gaattttaaa attcttaagc gttgtagaag ctttacttgt gggcttttta gcctttgttt
     9481 ttacaaaaga tattttaata gccctcatcc ttgctgtgtt tgtaggtatt ttcttctttc
     9541 gccttacagc taaaaaactc aaacttgcaa aaaaagaatt agaaatcgat gctttgaatt
     9601 tatttttgcg tcgttttggg gctaaattta gaaaagaaag tttaagccaa aaagattttt
     9661 taaaactaga acttagcgaa aatttaaagg attttaaaag ccaaaattgc tttgaattta
     9721 aagaatttaa aatttatgat attaacttca tcgatgaaaa caaacgcttt ttttgtggaa
     9781 ttttgcttga aattttaaag cctagcaaaa atcctagctt tgaagatgaa gagaaaattt
     9841 atgttaagtt acaagataaa aatttcaccc taaatcatat tttttctaag gacaatcact
     9901 atcttattgc cactctaaca aatccttttt tcatagactt aaaagaaagt ctagagaaaa
     9961 atttcaaaaa tttagaaaac aatctcaagc taatagaaga aaaaatcatc aaaatttaat
    10021 cctcatcttt agccaaattt tccaagcttt taagcccttc ttcgcctatc aaattcccgc
    10081 cttgcaagtc gctaaatata gcatttaaag aactcactat ggcagtagaa ttaaagctta
    10141 aattttctat ggctctttct ctttttttcc atatattttg caaggctctt ttttctgctt
    10201 ctagctcttc tttcatattt tgataagttt tgagtatgaa ggtgatttga gtgttaaatt
    10261 ccttagaatt gaggtattcg tataagatat gatttttctc atctttgttt tgcaaagcat
    10321 ttttgagttt ataagaattt ataatgcttt ctctaagcac tgctaaaacg cctttaaatt
    10381 cagcaaaagt gcagattaaa atcccctctt taaaatgtgt tttttgcttg tctttaggca
    10441 tggttttggt gattaaaacc gctatatcac ttttagcggc tatgctgtct agtttaagtt
    10501 tatcaagcca ttctttgtta aattctttag tgcgtttgct ctcatacaaa atactaccgc
    10561 aaatattgcc aaagctgtct tttacgatat gcaaacaatc cgccccattt actccctttg
    10621 gcacttcttt tacctcatcg ccgatgtatt cgttttggat atattcttct atgagtagtt
    10681 ctgctgcttc gccttggagt tgctgtgagc cttgctctat cctgcgttgt gcgtcctcta
    10741 gcttttgagc tacgctttta aaatttgttt ctaattcttt gtatttaaga tcttgctctt
    10801 gagtgctttt ttgaaattca agacgcattt tttctctttc aagctctagt tttttgcctt
    10861 cttgttcttt aaattcttta aacgcctctt ctttaacctc aaatttaagt ctttcttcgt
    10921 tttctttttg ctctcttttt agcttttcat tttcagcttt tatgcttaaa aattcgctaa
    10981 gttctttgct ctttttttct aattcttctt gcatgatttt catctcattt tcatgctctt
    11041 tgttaaattt ttcgctgaat tctttttgga aattttgctt ttgtgttagc aattcttgct
    11101 cgaatttttg tttttctaaa agaagttttt ggcttacttg ttcacttatg agtttttctt
    11161 gctctagctt ttgggctttt aagtcattaa aagctttggt gtattcggct cttttggcat
    11221 tgacctcatc ttcaaattct tttttttgct taagcatttc ttgcttggcc ttatctaaaa
    11281 tttgagcgta taaagcagtg cttatatcga taaaaattcc acaatttggg catttgattt
    11341 gctcgttttg atttaaattt gacataaaga cttccttgag aatttttata taaatttaac
    11401 atagaaaaac aaagattatt ctaagattga cttgttaaaa tccttgtttt aaaaataatt
    11461 aggattacaa atgcaaaaac acactaaaat tcacggcttt tcaaagctca aactcgtcat
    11521 catccttgct ttgatgtcaa gcatagcacc gctttctaca gatatgtatt tgcctgcact
    11581 tagccatgta gagcaaagct ttcatacttc taaagcactg actcaactta gccttgcaag
    11641 cttttttgtc gcctttgcct tagggcaact catatatggg cctttaagcg atatctttgg
    11701 gcgtaaaatt cctgctttgg taggaatttt cttctttatc gtttcaagct tgttttgtgt
    11761 gattatcgac aatatctatg cctttatcgc tttgagattt tttgaagcac taggaggctg
    11821 tgcgggagta gtgatcgcaa gggctattgt aaatgacttg tttgagatca aagaagctgc
    11881 ggggatcttt gctttgatga tggtatttag ctcccttgct cctatgcttt cgccgacttt
    11941 tggaagcttt ttgctggagt atttttcatg gcatagcatt tttacgactt tgtttgcttt
    12001 gggaattttg ctttttttga tgatactttt tggcttaaaa gaatccgcac cacaccttaa
    12061 aaataaaaaa ttctcccaca aagaagcgat gaaaagctat aaatttgttt taaaagataa
    12121 acgcttttta acctatgtct tttgtgctgc tttggcttta gctgcgatgt ttgcttatat
    12181 cacgggttcg agttttgtat ttacagaatt ttttgactta agcgagcaac aatttggcat
    12241 gctttttgga gcaaatgctc taggctttgt catctgtgca aatatcaatg caaggctagt
    12301 gcgtaaattt gaaagtgaaa aaatactttc taaagccttg atgatcatgt ttgtatcgac
    12361 tttaatcttg cttatcaatg cctttttgta tccgaattta tttctttttg aagcaagtat
    12421 ttttacaagt atcgctatgc ttggctttat cgcacccaat accacgactt tagctatggc
    12481 gagatttaaa gagcatagcg gaaccgcttc tgcggtgctt ggctttatac aatttgccct
    12541 agcaggactc atctcctctg tagtcagtgc tttagatgct aacacaccga taatccttgc
    12601 ttgtgtaatg tgtgcttgtg tcttggtggc aaatatgata tattttctag gtaaaaaaaa
    12661 tcccaaagga aaaatatgaa aacaaactcc ctttttatat cggtggcggt ggttttggca
    12721 agtgtgatcc tagcctttgg ctttaacaag gctttaagcg acttcaaaac acttgaaaga
    12781 agtgtcactg taaaaggact gagccaaaaa gatgtggaag cagataccct gatactgcct
    12841 ataaaattca caagatcagg caacaacctt gcaaatttat acgaagaact agagtctgat
    12901 aaacaaaata tcatacgatt tttagaagaa caaggcgtaa aatcagacga gatcagctac
    12961 aactcaccca acatcatcga tcgcctaagt gatccttaca gcaacgacac tcaagccaca
    13021 taccgatata taggcactgc aaatttactc atctatacga aaaacataaa gcttggaaaa
    13081 agcatactag aaaaaatttc aagccttgga aagcttggca tagtgactaa aatagaggat
    13141 tatgagatag aataccttta tacaaaactc aatgaaatca aaccccaaat gatagaagaa
    13201 gccacgctca atgctagaaa ttcagcaata aaattcgccc aagactcaaa cagtagccta
    13261 ggcaagataa aaaaggcttc tcaagggcaa tttagcatca gcaacagaga taaaaacaca
    13321 ccttacatca aaaccataag agtggtttct actatagaat actatttgaa agactgatga
    13381 tgaattttca agctaagttt taaggcttag cttggcacta tggaattttt tcgtgcggtt
    13441 ttttggagtg agaatataca aagcaaaagt ataatgctat ataaaacact agtggatttt
    13501 atggtatttt ctgtaatctt gtcttgattt ataatcttta aaagttctgt atatttttct
    13561 cctaaaactt ccttggttat atttgaattt acatcgttta attttaaaag attttcttta
    13621 tttgctatta tcaaagcttt agctgaattt aactctgtaa aagaaatatt ttgatctttt
    13681 aaatggagat taaaatcatt ttgcaatatg cttgctagat ttacaatagc actcgcattt
    13741 aaatcattta aacttttttc aaattgactt tcataaagtt tgcctgatga aaatacacct
    13801 gtaaaagggt ttataagttg tgagctatt
//
LOCUS       DBBXOW010000045        13799 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.046, whole genome shotgun sequence.
ACCESSION   DBBXOW010000045 DBBXOW010000000
VERSION     DBBXOW010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13799
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.046"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(65..140)
                     /locus_tag="ACJE1S_001273"
     tRNA            complement(65..140)
                     /locus_tag="ACJE1S_001273"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(105..107),aa:Phe,seq:gaa)
     gene            281..1624
                     /locus_tag="ACJE1S_001274"
     CDS             281..1624
                     /locus_tag="ACJE1S_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015379 - potassium:chloride symporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HGG0806817.1"
                     /translation="MKQFGLDRRTFKILLAGYIVIALLGAILLHSSWAHTSPISFIDA
                     FFTSTSAVSMTGLIVKNTAVDFTLAGQIIILILVQIGGLGYMSIGLFVYLIIRKKVGF
                     NGRNLLKESLFYPSMEGLFKFFKKVLLFIFTIELIGTILLTMRFALEMNFGKALWFGF
                     FHSISAFNNSGFTIFENGLLAYKHDVAINLIFTSLIIIGGLGYFVLVELYFFQRKRLQ
                     NLSLHTKVVIMATLFLIISSTLIIFLLEYANPKSIGSFSLFDKILSSYFIAINYRTAG
                     FNTLDMSGLHDASLFFGSLFMVIGGAPGGTAGGMKITTVVVLLFYAYWSIRNGRVRIF
                     NHEIPQEIISRAFIIAVGSAVYIVIAVIFLSLLESEFNFIHLLFETSSAFATVGISVG
                     DGGDLSLCALFSNPSKIIIIIMMLSGRIGVFAFLLSVFQQDKAIHIKFPKGKIYL"
     gene            1637..2287
                     /locus_tag="ACJE1S_001275"
     CDS             1637..2287
                     /locus_tag="ACJE1S_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HGG0806818.1"
                     /translation="MKKLSYGVIGLGKFGSVVADELLAGGHTVIIADKDEEALKSIQN
                     SPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVNNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKKLVKDFLTKDADYEVFDLSANTIRAIKITIDDK
                     LAGNSLKHIAQNMRVISYKKLNTDWEILPDLETTTVYGGDVVILLGTVKELREFEH"
     gene            complement(2288..2959)
                     /locus_tag="ACJE1S_001276"
     CDS             complement(2288..2959)
                     /locus_tag="ACJE1S_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HGG0806819.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGFKASMEHKKGVPSKLNKD
                     LFYRRIDAAIVSSIESARKKYKNLDLGICANKRVLSVLVEKNTPNAKDPSSATSNALA
                     KVLKQEGRVIIGDKALKLYLQDPSRYTDLCTKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQNYAKTRDLDIKDIRYYLDEIIYHKISTKEKAALKRFIKACK
                     ALNLT"
     gene            complement(2965..3591)
                     /gene="upp"
                     /locus_tag="ACJE1S_001277"
     CDS             complement(2965..3591)
                     /gene="upp"
                     /locus_tag="ACJE1S_001277"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HGG0806820.1"
                     /translation="MKNIHHICHPLIEHKLGFLRDKETKPFHFRMLIDEISTFLLFEA
                     TKDLCLKETQIQTPVANAKVKRLDEKIMICPILRAALGMLDSIFRLIPDASVGFLGFV
                     RNEKTLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIEACNFLKSQGVKKIKFISIL
                     AALQGLQKFSQMHDDVEVFVACIDEDLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(3588..4823)
                     /locus_tag="ACJE1S_001278"
     CDS             complement(3588..4823)
                     /locus_tag="ACJE1S_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HGG0806821.1"
                     /translation="MNLKEEALRYHLGGKIDIKPSKPMNSSHDLSLAYSPGVAEPCIE
                     IASNNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFADVNAY
                     DLEIEAHSIEEIVAFCKAIAPTFGGINLEDISAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFEEIKVVVSGAGAAGIASARMYRNLGVKNIILVDSKGVVN
                     KKRTDLNQYKLEFVSDTQADTLKEAMKDADVFLGLSAPKILDDEMILSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDAIVGTGRSDYPNQINNVLGFPFIFRGALDVRATKITENMK
                     VAAAKALADLAKLPVSDAVKNAYKISHLEFGKDYVIPKPFDERVKAVVSTAVAAAAVK
                     DGVALLKEFDEKTYFESLK"
     gene            complement(4823..6214)
                     /gene="gltX"
                     /locus_tag="ACJE1S_001279"
     CDS             complement(4823..6214)
                     /gene="gltX"
                     /locus_tag="ACJE1S_001279"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HGG0806822.1"
                     /translation="MTGKLTTRFAPSPTGYLHIGGLRTALYSYLYARKNKGNFLLRIE
                     DTDLKRNSKEATQAIIEAFKWCGLDYDGEVTYQSERFDLYKKYIQKLLDEGKAYYCYM
                     SKEELDELRAKQEAAKERPRYDGRYRDFTGTPPSNIEPVVRIKAPQKGEICFIDGVKG
                     EVKFKVEDILDDFIIARSDGSPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFEIPKFYHVAMIHGEDGKKLSKRHGATDVMEYKAMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKRLFDPNHINKSASCYNFKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYTKAGFLLDLLRERAKTLLEIISGAKSIVEAPQNYDENAINKFINENNLLLLQNYAN
                     ELNEEKSAKDFEEFTNEFLQKNEVKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVNEC
                     KKRIKKFLDFKGK"
     gene            6279..7094
                     /locus_tag="ACJE1S_001280"
     CDS             6279..7094
                     /locus_tag="ACJE1S_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806823.1"
                     /translation="MKKILLSFVFFISLTHANTINAIAVVVDKEPITTYDIEQTMKTL
                     NIPKNQALGILINEKMELSQIKQFGIYTSELELDNAIGKMLAQNKISLEDFKRDLQAK
                     GQNYEQFRSNFKKDFEKRKLYEKIASTAKTDFSDEGAKKFFEQNKNKFTLFTEINVNI
                     YRSNNAQDLENIKATTKTALKAEKATLTPNNSDPRLLGLLSSIPIGSFSPVLNSQKGY
                     EIYQVKDKNGGQTPEYYQIKNEILNAYVSEQRQNYIQDYFDKLRSKINIEYLR"
     gene            complement(7122..8453)
                     /locus_tag="ACJE1S_001281"
     CDS             complement(7122..8453)
                     /locus_tag="ACJE1S_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HGG0806824.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIISAAEIAEADAIFPGYGFLSENQTFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVEHEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQIIGDS
                     FGNVIHIGERDCSMQRRHQKLIEESPAILLDEKTRARLHETAVKAAKAISYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQENVKLKGHS
                     IECRITAEDPKTFLPSPGKIIKYVPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAISKMKVALDELIIGGIKTTKDFHLAMMDNPDFISNNYDTNYLARH"
     gene            complement(8455..8910)
                     /gene="accB"
                     /locus_tag="ACJE1S_001282"
     CDS             complement(8455..8910)
                     /gene="accB"
                     /locus_tag="ACJE1S_001282"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HGG0806825.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     LACPPVPAPQPINVNVVNEAQPSSAKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSSV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIVEILVADGQPVEFGMPLFTVEKL"
     gene            9068..9628
                     /gene="dcd"
                     /locus_tag="ACJE1S_001283"
     CDS             9068..9628
                     /gene="dcd"
                     /locus_tag="ACJE1S_001283"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HGG0806826.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFLEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            9678..10682
                     /gene="pseB"
                     /locus_tag="ACJE1S_001284"
     CDS             9678..10682
                     /gene="pseB"
                     /locus_tag="ACJE1S_001284"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HGG0806827.1"
                     /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSVAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLIEQGAKELPITDTRMTRFWISLEDGVKFVLSNFARM
                     HGGEIFIPKIPSMKITDLAHALAPHLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKLVDQESDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            10684..11814
                     /gene="pseC"
                     /locus_tag="ACJE1S_001285"
     CDS             10684..11814
                     /gene="pseC"
                     /locus_tag="ACJE1S_001285"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HGG0806828.1"
                     /translation="MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALDIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAQKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELITKIKLLRSHGIIKKRLWDS
                     DMIELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHTGIGVQVHYKPTYEFSFYKKLLGEIKLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCE"
     gene            11807..13121
                     /locus_tag="ACJE1S_001286"
                     /pseudo
     CDS             11807..13121
                     /locus_tag="ACJE1S_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791677.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            complement(13104..>13799)
                     /locus_tag="ACJE1S_001287"
     CDS             complement(13104..>13799)
                     /locus_tag="ACJE1S_001287"
                     /inference="COORDINATES: protein motif:HMM:NF014571.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046353 - aminoglycoside
                     3-N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3) family N-acetyltransferase"
                     /protein_id="HGG0806829.1"
                     /translation="DFILFTGNLMQFLQNIDGDNRKKLNFLLDCMKDNVDTLAIHTFN
                     WDFCKGLAYDILNSKSQTGALGNIALKRDDFRRTKHPIYSFAVAGKFQKELVVLENKG
                     AFDNNSPFAFMHKNNAKMIIVNLPLQDSFTFVHYVEECLKVDYRFNKSFEALYTDEKG
                     FTQLKTYDMFVRKDGVLTDVNGLENLFIKENVMELKKFENLCIKKIDLSKAYDVIVKD
                     IEDNHAKNLMNYA"
BASE COUNT         4647 a         2429 c         2128 g         4595 t
ORIGIN      
        1 taaataaaat ttgatgaaga acttaggaag aaattaaagt catttttaat aaaaaataaa
       61 atgatggtgg ttagaggcag aatcgaactg ccgacacgca gattttcagt ctgctgctct
      121 accgactgag ctatccaacc gagtcatctt taaaaataaa gtgtaattat actttttttt
      181 ctttaattta agtttaaata taaaaataaa attttatttg ccttaaagtt ttaatccgat
      241 agaatagtcg gtttaaaatt aaaaaccaat gaggattttt ttgaaacaat ttggcttaga
      301 cagacgaact tttaaaattt tgctagcagg atatattgtc attgctttac ttggcgctat
      361 tcttttgcat tcaagttggg ctcatacaag tcctattagt tttatcgatg ctttttttac
      421 tagtacttca gctgtgagta tgactggact tattgttaaa aatacagcag ttgattttac
      481 cttggcagga caaattatta ttttaatttt agttcaaatt ggcggcttag gttatatgag
      541 tatagggctt tttgtttact tgattatacg caaaaaagta ggttttaatg gtagaaactt
      601 acttaaagaa tctttatttt atccttccat ggaaggactt tttaaattct ttaaaaaagt
      661 tttactattt atttttacaa tagaacttat aggcactata cttcttacca tgcgttttgc
      721 acttgagatg aattttggta aagccttatg gtttggattt tttcattcaa tcagtgcttt
      781 taataattca ggttttacta tttttgaaaa tggacttctt gcctataagc acgatgtagc
      841 tattaatctc atctttactt ctcttattat cattggtgga cttggatatt ttgtcttagt
      901 tgaattgtat ttttttcaaa gaaaaagact gcaaaattta agcctacata ccaaagtagt
      961 tattatggca accctttttc ttatcatttc ttcaacactt attatctttc ttttagagta
     1021 tgctaaccca aaatccatag gtagcttttc tctttttgat aaaattttga gttcttattt
     1081 tattgcgatc aattaccgca cagcaggatt taatacactc gatatgagtg gcttgcatga
     1141 tgcaagctta ttttttggct ctttatttat ggtgattgga ggagcaccgg gtggaacagc
     1201 agggggaatg aaaatcacaa ctgttgtggt gcttttgttt tatgcttact ggagcattcg
     1261 caatggaagg gtaagaattt tcaaccacga aattccacaa gagatcattt caagagcatt
     1321 tattatagca gtgggttcgg ctgtttatat agttatagcg gttattttcc tttctttgct
     1381 agaatcagaa tttaatttta tccatctgct ttttgaaacc tcatcagcat ttgcaacagt
     1441 gggaatttcg gtaggagatg ggggagatct ttcgctttgt gctttattta gcaatccaag
     1501 caaaattatt attattatta tgatgttaag cggaaggatt ggtgtttttg cgtttttact
     1561 ttctgtattt cagcaagata aagcgataca tatcaaattt cctaaaggaa aaatctattt
     1621 ataaaggtta aatataatga aaaagcttag ttacggggtt ataggacttg gaaaatttgg
     1681 atccgtagtc gcagatgagc ttcttgctgg aggacatact gtaatcatag ccgataaaga
     1741 tgaagaagct ttaaaaagta tacaaaattc accaagctat gcctatatct tggattctac
     1801 caatatttca gcactcaaag aagcgggttt tcatgatgta gaagtcgtga ttgtaagcat
     1861 aggtgaaaat gttgaaaaat ccatacttac tctaatggct cttaaagata taggagtaaa
     1921 taatattatc gcaaaagcca cttctaacat tcatgggcaa attttatcca aacttggggc
     1981 tacaaaagta atctatcctg aaaaagaaag tgctaaaaag cttgtaaaag attttttaac
     2041 caaagatgca gattatgagg tttttgatct atcggctaat actatccgtg ctattaaaat
     2101 cactatagat gacaaattag caggaaattc attaaagcac attgcacaaa atatgagagt
     2161 tattagctat aaaaaactta atacagactg ggaaatattg cctgatttag aaacaactac
     2221 tgtttatggt ggtgatgttg taatcttact tggaacggtt aaagagctta gagaatttga
     2281 gcattaatta agtaagattt aaagccttgc aagcctttat aaaacgcttt aaggctgctt
     2341 tttctttggt ggaaatttta tgatatatga tttcatctaa ataatatcta atatctttta
     2401 tatctaaatc ccttgtttta gcataatttt ggagtatata ataaggaatt ttaatctttg
     2461 tttttggaaa tttttttaag atttgtttat ataaagcttt tttttgcaca catgaaaacc
     2521 tagcaaaaac aaaaggcagg cctgtttttt catgccattt tgtgcacaaa tcagtatacc
     2581 tagaaggatc ttgtaaataa agttttaaag ccttatcacc tataatcacc ctcccctctt
     2641 gttttaaaac cttagctaaa gcattagaag ttgccgagct tggatcttta gcattgggtg
     2701 tatttttttc tactaaaaca cttaaaactc ttttattggc acaaataccc aaatctaaat
     2761 ttttatattt ttttctagcg ctttctatac ttgaaacaat agctgcatca attcttctat
     2821 aaaataaatc tttatttagc ttacttggaa ctcctttttt atgctccata cttgctttaa
     2881 aaccattagg taaaggatat ttcttaagat atatatgcaa aggtaaaaga ttaatataat
     2941 caatttttcc aaaaatcatc tcttttaaag agtgttaaac actctatctc ctgcatctcc
     3001 aagccctggg ataatataac ctttttcatt taaatcttca tcaatacaag ccacaaaaac
     3061 ttctacatca tcatgcattt ggctaaattt ttgcaaacct tgtaaagcag caagtatgga
     3121 tataaatttt atttttttaa ctccttggct ttttaaaaaa ttacaagcct ctatagcagt
     3181 cccacctgta gcaaacatag gatctataac aatagcggtg cgtttttttg catctttagg
     3241 aagtttttga aaataaaaat ccgccttgag cgttttttca tttctaacaa aacccaaaaa
     3301 tcctacacta gcatcaggaa taagtctaaa aatactatca agcataccca aagctgccct
     3361 taaaataggg catatcataa tcttttcatc taatcttttt accttagcat tagcaacagg
     3421 ggtttgaatt tgtgtttctt ttaaacataa atctttagtc gcttcaaaaa gcaagaaagt
     3481 agaaatctca tcaatgagca ttctaaaatg gaaaggttta gtttctttat cgcgcaaaaa
     3541 ccctaattta tgctctatca aaggatggca tatgtgatga atatttttca ttttaaactc
     3601 tcaaaatatg ttttctcatc aaattcctta agcaaagcta ccccatcttt tacagccgca
     3661 gcagctaccg cagtgcttac aacagcctta accctctcat caaaaggttt tgggataaca
     3721 taatcctttc caaattctaa atggcttatc ttataagcat ttttaaccgc atcacttaca
     3781 ggtaattttg ccaaatctgc taaagctttt gctgcagcta ctttcatatt ttcagtaatt
     3841 tttgtcgcac gcacatctaa agccccacga aaaataaaag gaaagcctaa aacattattg
     3901 atttgattag gataatcact tcttcccgtt cctacaatag catcttttct aagccttgcc
     3961 acatcttcag gcatcacctc tggaatagga tttgccaagg caaagataac aggatctttt
     4021 gccatagaca aaatcatctc atcatctagt atctttggtg cactaagccc caagaataca
     4081 tccgcatctt tcatagcctc ttttaaagta tctgcttgcg tatcgcttac aaattcaagc
     4141 ttgtattgat ttaagtctgt tcttttttta ttgaccacac ccttactatc tacaagaatg
     4201 atatttttaa cacctaaatt tctatacatt ctagcactag caatacccgc agctcctgct
     4261 ccacttacaa caactttaat ctcttcaaat tttttaccac ttatctccat agcattcata
     4321 agccctgcgg ttgagataat agcggttcca tgctgatcat cgtgcattac aggaattcct
     4381 aaatcctgca aagccgcttc gatttcaaaa catttaggtg ctgaaatatc ttctaaattg
     4441 attccgccaa aagtaggtgc tatggcttta caaaaagcaa caatttcttc aatgctgtgt
     4501 gcttcgattt ctaaatcata cgcatttaca tcagcaaatt ttttaaacaa gcaagcctta
     4561 ccttccataa ccggtttaga agcttgcgcg ccgatatttc caagacctaa aaccgcagaa
     4621 ccatcactaa cgatagctac taaattcgct ttgtttgtat aagtataagc aagctcatta
     4681 ttagaagcaa tttcaatgca aggttctgca acacctggac tataagccaa agataaatca
     4741 tgacttgaat tcataggttt tgatggcttt atatctatct tgcctcctaa gtgatatctt
     4801 aaagcctctt cttttaaatt cattattttc ctttaaaatc taaaaatttt tttattcttt
     4861 ttttacattc attgacccct aaaaactcta aaacttcaaa aatgctagga ctaaccgcac
     4921 ttcctgttag agctatgcgt ataggttgag ccaaatcttt taattttacc tcattttttt
     4981 gtaagaattc gttagtaaat tcttcaaaat cttttgcact tttctcttca tttaactcat
     5041 ttgcatagtt ttgaagcaat aaaagattgt tttcgtttat aaatttattt atagcatttt
     5101 catcataatt ttgtggcgct tcaacgatac ttttagctcc gctaataatt tcaagtaaag
     5161 tttttgcgcg ctctcttaat aaatcgagta aaaatcctgc ttttgtataa acgcttagat
     5221 caaaaccaag atcttttaac tgacgattga tttcttcaaa aggcaaagtc ttgatataat
     5281 gagcattgag ccattcaagt tttttaaaat tataacaaga agcacttttg ttgatatgat
     5341 taggatcaaa aagcctttta agatcttcta aagaaaaaac ctcatcatcg ccatggctcc
     5401 atcctaaacg cactaaaaaa tttagcaaag cttgaggtaa aattcccata gccttgtatt
     5461 ccatcacatc ggttgctccg tgtcgttttg aaagcttttt accatcttct ccatgtatca
     5521 tagccacatg gtaaaattta ggaatttcaa atcctaaagc ctcataaagc acgatttgtt
     5581 taggagtatt tgaaagatga tcatcccctc taatcacatc gcttactccc attaaagcat
     5641 catcaattac aactgtaaaa ttataagtag gacttccatc acttcttgct atgataaaat
     5701 catctaaaat atcttctact ttaaatttca cttccccttt aacaccatct ataaagcaaa
     5761 tttcaccctt ttgaggagct tttatacgca ccacgggttc tatatttgat ggtggagttc
     5821 ctgtaaaatc cctgtatctg ccatcatatc ttgggcgttc tttggccgct tcttgtttag
     5881 cacggagttc gtcaagctct tctttactca tataacaata ataagccttg ccctcatcca
     5941 aaagtttttg tatgtatttt ttataaagat caaagcgttc agactggtaa gttacctcac
     6001 catcataatc caaaccacac catttaaagg cttctatgat agcttgcgta gcttctttgg
     6061 aatttctttt taaatccgta tcttctatac gaagtaaaaa attgccctta ttttttcttg
     6121 catacaaata actataaaga gcggttctta aaccacctat atgcaaatat cctgtagggc
     6181 ttggagcgaa acgagtcgta agttttcctg tcattttttg ccttttctta aattttaatt
     6241 gatataatgc gatatttaca cttaaataaa ggtttgaaat gaaaaaaatt ttactaagtt
     6301 ttgtattttt tataagctta actcatgcaa atactataaa tgctattgct gtagtggtag
     6361 ataaagagcc tatcacaacc tatgatatag aacaaaccat gaaaacccta aatataccta
     6421 aaaatcaagc cttggggatt ttgattaatg aaaaaatgga gctttcacaa ataaaacaat
     6481 ttggaattta tacgagtgag cttgagcttg ataatgccat tggtaaaatg ctagcacaaa
     6541 ataaaatttc acttgaagac tttaaaagag atttacaagc taaggggcaa aattacgaac
     6601 aatttcgtag caattttaaa aaagattttg aaaaaagaaa actttatgaa aaaattgcca
     6661 gcacagctaa aaccgatttt agcgatgagg gagctaaaaa atttttcgaa caaaataaaa
     6721 ataaatttac actctttacc gaaattaatg taaatatcta tcgttctaac aatgcacaag
     6781 atttagaaaa tataaaagct accacaaaaa ctgcacttaa agcagaaaaa gccaccctca
     6841 ctcctaataa ttcagatcca agacttttag gacttttatc atctataccc ataggaagct
     6901 tttctccggt tttaaattcg caaaaaggtt atgaaattta tcaagtaaag gataaaaacg
     6961 gaggacaaac tccagaatat tatcaaatta aaaatgaaat actcaatgct tatgtaagcg
     7021 agcaaagaca aaattatata caagattatt tcgataaatt acgctcaaaa atcaatatag
     7081 agtatttaag ataaaatcaa gatggaaaaa atccatcttg attaatgtct agcaagatag
     7141 ttggtatcgt aattattact aataaaatca ggattatcca tcattgcaag atgaaaatct
     7201 ttagtagttt taatcccacc tataatcagc tcatccaaag ctactttcat ttttgaaatg
     7261 gctttgttgc gatcttctgc ccaaaccaca agttttccta tcatagaatc ataatacggc
     7321 ggcacgctgt agtcttgata acaatggctt tccattctaa cattgcgccc tgcaggtgga
     7381 acatacttga taatcttacc tggacttggc aagaaagtct taggatcttc agcagtgatt
     7441 ctacattcta tagaatgtcc ttttaacttc acattttctt gagaaggtaa agcataacct
     7501 tcagctactt taatcatttg ttcaatgata tcaatcccgc tcaccatttc gctcacacaa
     7561 tgctcaactt gcaaacgcgt attcatctct ataaaataaa aatccaaatt tttatctact
     7621 aaaaattcaa aagtccctgc accctcatag cttatagctt tagcagcttt tactgctgtt
     7681 tcgtgaagtc ttgcgcgagt tttttcatcg agtaaaattg ctggagattc ttctataagt
     7741 ttttggtggc gtctttgcat agagcaatcc ctctcaccaa tatggatcac atttccaaaa
     7801 ctatctccga tgatttgaac ttctatatgg cgtggatttt gtatgtattt ttccatatac
     7861 atagtcccat cgccaaaagc tgtcatcgct tcactttcag ctgaccaata tgctttttca
     7921 aggtcttttt catgctctac tacacgcatt ccacgacctc cgcctccagc tgctgctttt
     7981 aaaatcacag gataaccgat ctctttagca agttttttag ccgcttcagc acccgctaaa
     8041 gctccatcac ttcctggtat aacaggaact cctgctcttt gcataacttg cttagctttt
     8101 gatttatcac tcattaaatt catagcttca accgaaggcc ctataaattt gatattgtgt
     8161 ttagcacaaa tttcaacaaa agtttgattt tcgcttaaaa atccataacc tggaaaaatc
     8221 gcatccgctt ctgcaatttc agctgctgaa ataatagcag gtatattaag ataactttca
     8281 gaacttcttg cttttcctat acaaatactt gcatctgcat attttaaata caaagcatct
     8341 ttatctgctt cagaataaac gcaaattgct ttttttccca tttctttaat tgttcttaaa
     8401 gctcgaagtg ctatttctcc acgattagca attaaaatgc ttttaatttc cattttataa
     8461 tttctccacc gtaaataaag gcataccaaa ttctacaggc tgaccatctg caactaaaat
     8521 ttctactatt ctacaatcaa attcagcttc aatttcattc atgattttca tcgcttcgat
     8581 gatagcaata gtatcgcctt ttttaaccga actgcccact tttacaaaag gagctgcacc
     8641 tgggcttgga gcttgataaa aagttcctac catagggctg tttatacttg gtttatttga
     8701 ttttgcactt gaaggctgtg cttcattaac tacattaaca ttaataggct gtggagctgg
     8761 aacaggtggg caagccaaag gagctggaac atcacaacac atatctcttt caagttcgat
     8821 ttcaaatcca tcttgctctt tgatttttat tttactgata ttagcctcgg caaacaaatt
     8881 tactaattct ttaatctctt cttttgtcat attttcgtct cctgatttta agaacttaat
     8941 ctagtattat attaaaaaac ttgaaattta actttaaaaa ataaaatttc acgcttaaaa
     9001 gtttcataaa atataaaaaa taagctataa tccaaaaaaa ttatgtttaa aaataaaggt
     9061 atattaaatg ggcttaaaag cggataattg gataagaaaa atggcattag aacacaagat
     9121 gatcgaacca ttttgcgaag caaatatagg aaaaggtgtg gtaagctatg gactttcaag
     9181 ctatggttat gatatacgcg tagggcgtga gtttaaaatt tttaccaatg ttaattcaac
     9241 tgtagtggat ccaaaaaatt ttttagaaga aaatgtggtg gattttgaag gtgatgtatg
     9301 tatagttcct gcaaattctt ttgcacttgc tagaactata gagtatttta aaatgcctga
     9361 tgatgtctta gctatttgtc ttggcaaaag cacttatgca agatgtggca tcatcgtcaa
     9421 tgttacccct tttgaaccag gttttgaagg acatatcact atagaaattt caaatactac
     9481 gcctttacct gcaaaaattt atgccaatga aggtatagcg caagtgttgt ttttgcaagg
     9541 cgatgaaaaa tgtgacacca cttataaaga taaaaaaggc aagtatcaag ctcaaacggg
     9601 tataaccttg ccaagaattt taaaatagga acacttattg ctttaatttt aaaaaaactt
     9661 aaacaaagga aggcaaaatg tttaacaaaa aaaatatctt aatcacaggc ggaacaggct
     9721 cttttggaaa aacctatact aaggttttat tagaaaatta taaacctaat aaaatcatca
     9781 tttactctcg tgatgagctc aaacaatttg aaatggcaag tgtttttaat gctccttgta
     9841 tgcgttattt tataggggat gtaagagata aagaacgctt aagcgttgct atgcgtgatg
     9901 tggattttgt tatacatgct gctgcgatga agcatgtgcc tattgctgaa tataacccta
     9961 tggaatgtat aaaaacaaac atccatggcg ctcaaaatgt gatcgatgct tgctttgaaa
    10021 atggggttaa aaaatgtatc gctcttagca cagacaaggc ttgcaatcct gtaaatttat
    10081 acggtgcaac caaacttgca agcgacaagc tttttgtcgc tgcaaacaat atagcaggta
    10141 acaaacaaac acgctttggt gttacaagat atggcaatgt tgtaggttca agaggatcgg
    10201 tagtaccttt ctttaaaaag cttattgagc aaggtgctaa agaacttcct atcaccgata
    10261 caagaatgac tcgtttttgg atcagccttg aagatggagt gaaatttgta ctgagcaatt
    10321 ttgcaagaat gcacggagga gaaattttca tccctaaaat tccttcgatg aaaatcaccg
    10381 atctagctca tgctttagct cctcatttaa gtcataaaat cataggtatc agagcaggag
    10441 aaaaactaca tgaaatcatg atttcaagtg atgatagtca tttaacctat gaatttgaaa
    10501 actactatgc tataagtcct agtattaagc ttgtagatca agagagtgat tttagtatca
    10561 atgccttggg cgaaaaagga caaaaggtaa aagatggttt ttcttatagt tcggataata
    10621 atcctttatg ggcaagcgaa aaagaacttt tagaaatcat caatcacacc gaaggttttt
    10681 aaaatgctta cttattctca tcaaaacatc gatcaaagcg atatagatgc gcttacaaaa
    10741 gctttaaaag atgaaatttt aacagggggt aaaaaggtag atgaatttga agaagccctt
    10801 tgtgaatatg tgggcgtaaa acacgcttgt gtattaaact cagccacttc agcccttcat
    10861 cttgcctata cagcactaga catcaaagaa aaaatcgttt taaccactcc tttaaccttc
    10921 gctgctacgg ctaatgcagc cttaatagct ggagctaagg tagaatttat cgacattaaa
    10981 aacgatggca atattgacga aaaaaaacta gaagcaagac ttttaaaaga tagtaaaaat
    11041 ataggagcta ttagcgtggt ggattttggg ggaaatagcg ttgaaataga tgaaatttca
    11101 agccttgctc aaaaatacaa tatcccttta atcgatgatg caagccatgc tttaggtgcc
    11161 ttatataaaa gtgaaaaagt aggaaaaaaa gccgatcttt ctatcttttc ttttcatcct
    11221 gttaaaccca tcactacttt tgaaggcggg gctgtggtga gtgataatga agagcttatc
    11281 accaaaatca agcttttaag aagccatggt atcattaaaa aaaggctttg ggatagcgat
    11341 atgatagaac ttggctataa ttaccgctta agcgatgttg cttgtgcttt agggataaac
    11401 cagcttaaaa aactcgatca caatcttgaa aaaagagaag aaattgcaag tttttacgat
    11461 aaagaatttg aaaaaaatcc ttatttttcc acgataaaaa tcaaaaatta taaaaaaagc
    11521 tcaagacatt tataccctat cttgcttttt cctgaatttt attgtcaaaa agaagaactt
    11581 tttgaaagct tacttcatac aggaattggc gtacaggtac attataaacc aacttatgag
    11641 tttagttttt ataaaaaact cttaggagaa ataaaacttc aaaatgcgga taatttttac
    11701 aaagccgagc ttagcatacc ttgtcatcaa gaaatgaatc taaaggatgc aaaatttgta
    11761 aaagatactt tatttagcat tcttgaaaaa gttaaaaagg gatattgtga ataagctaga
    11821 ctttagaagc caagatttta gccaaactgg aaaggctatg tatgaactag cttgcgaact
    11881 ttttcctatc cctagaagca tcacagggca aggttttaga gatagcttag aaattttaaa
    11941 taaaactctg gggggggata ctcaaatttc actctataaa aagtggcaca aaggtttttg
    12001 actggatagt ccctgatgaa tggaacgcca aagaagccta tatcatcact ccagaaggag
    12061 aaaaaatttg tgattttaaa aagcataatt tacaccttct aaattatagc gaagctattg
    12121 ataaagaaat cgaacttgaa gaacttcaaa atcatcttta ctccatagaa gaaatgcccg
    12181 atgctattcc ttatgtaacg agttattaca aaagacgttg gggattttgt ctcacgcata
    12241 atgaaagaaa aaaactcaaa aaaggcaaat acaaagtcta tatcaatgcg aaacatgatg
    12301 aaaatggggt tttggattat gctgatttta tcctacctag tacgcaaaat tcaaaagatg
    12361 aaattttaat ttcaacctat ctttgtcatc cttccatggc aaataatgag cttagtggcc
    12421 ctgtggtggc tattttccta gcaaaatggc ttttgagttt aaaagaaaga aaatataatt
    12481 accgctttgt catcatccct gaaaccatag ggtctatagt ctatcttagc aaacatttag
    12541 agcatttaaa aaaatatgtt aaagcaggct ttgtgctttc ttgcttaggc gatgatcatg
    12601 cttactcact catacataca cctaaagaaa acactctaag cgataaagtt gccttgcata
    12661 cgcttaaaaa taaagaaaat ttcaaagctt ttagtttttt ggatcgtgga agtgatgaaa
    12721 gacaatacaa tgctccgctt gtaaatcttg gcattgtagg agtatgtcgc acaagatacc
    12781 tagaatacga acaataccac accagcaaag atgatctcaa ttttatctct gaaaaaggtt
    12841 taatgggtgg acttcaaagc atacaagaaa tgattttaaa tctagaaatc aacgccgtat
    12901 atgaaaacac catagtatgc gagcccaatc ttggcaaaag aggactatat cataccctta
    12961 gcactgccaa tgacattcct ttagcttgta attttctagc ttactgtgat ggagagaatg
    13021 atatcatcga tatagccaat atcttaaata tgcaagctta tgaatttaaa gaacttttgg
    13081 aaaaaatttt agaatataaa cttttaagca taattcatta aatttttagc atgattatct
    13141 tcaatatcct taacaattac atcatatgcc ttagataaat cgattttctt aatacaaaga
    13201 ttttcaaatt ttttaagctc catcacattt tcttttataa aaagattttc caaaccatta
    13261 acatctgtta aaactccatc tttacgaaca aacatatcat aagttttcag ttgcgtaaat
    13321 cctttttcgt ctgtatataa agcctcaaaa cttttgttaa aacgataatc gacttttaaa
    13381 cactcttcca cataatgcac aaaagtaaaa gaatcttgca aaggcaaatt tacaataatc
    13441 atttttgcat tatttttatg cataaaagca aaaggagaat tattatcaaa agctccctta
    13501 ttctcaagca caacaagttc tttttgaaat tttccagcaa ccgcaaaaga ataaataggg
    13561 tgttttgttc ttctaaaatc atctctttta agagctatat tacctaaagc tccagtttgt
    13621 gatttagaat ttaaaatatc atatgccaaa cctttacaaa aatcccaatt aaaagtatga
    13681 atagctagtg tatctacatt atctttcata caatctaata aaaaatttaa tttttttcta
    13741 ttatctccat ctatattttg caaaaattgc atcaaattcc ctgtaaataa aataaaatc
//
LOCUS       DBBXOW010000046        13552 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.047, whole genome shotgun sequence.
ACCESSION   DBBXOW010000046 DBBXOW010000000
VERSION     DBBXOW010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13552
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.047"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..2195)
                     /gene="pbpC"
                     /locus_tag="ACJE1S_001288"
     CDS             complement(<1..2195)
                     /gene="pbpC"
                     /locus_tag="ACJE1S_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HGG0806830.1"
                     /translation="MKNALKIFSFLLLFFLTYVFYVYFSFDKNTLLDDFKSRYSKILY
                     DKNGEILSVFLNDEEQWHIKSTDIPKRLKVAVINYEDRKFYSHFGVDFLALMRAFVNN
                     FNSTQRSGASTISMQTIKLWDKKDRTYFNKFNEIIQSLALENAFSKDEILKLYLSNAP
                     YGGNLIGYEAAILFYFDKNPKDLTWAQAALLAILPNQPGLINLEKNKTKLLDKRNKLL
                     AKLYERKLINKDIYELSLKEPLPNFKPRKNIAPHLALRLLSDDNKEIFSSIDKKIQLK
                     IEKKAKEFSYTLQQKGIQNLAIILADTKTRKVLAYVGSQDFYDMANLGQINGNIAKRS
                     VGSTLKPFLYALSIDEGIIAPDSILLDVPTFFSNFNPQNANKKYYGIISAKEALQRSL
                     NVPFVSLLQDYGYEKFFYKLKAFLNFEDENYKRYGLSLILGTKELSLEDLIKLYLGLA
                     NYGELTNLSFIRDENLSGVARMFSKGSAYLTLEAMKELQRVGLENYNKEKIISWKTGT
                     SYGRKDAWAMGATPKYTLGVWVGNFSGEANANLYGVSIAGDLLFEILGLLDEVDLEFA
                     PPDDLMTIKLDSISKYRYDEDLNTSYINVLYPKGANILRTSPFLKKVYEYQGRELDSK
                     DIHFKDAKALIKLDFPAYALYFFQQRNFKFSNKKGVKIIYPKDNLKLILAKDLNGMKG
                     LVAKVANLNNEKLFWYLNQKLIYEGDENTQNLNLKEGKYQLFIISQSGE"
     gene            complement(2203..7455)
                     /locus_tag="ACJE1S_001289"
     CDS             complement(2203..7455)
                     /locus_tag="ACJE1S_001289"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0010951 - negative regulation of
                     endopeptidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin"
                     /protein_id="HGG0806831.1"
                     /translation="MLKNILISLILSFLLIACGGEKNKNSSELIRAQSQGLLKNHEAI
                     FVEFKEAIVDFDEMSIDAKINSKNSKILLTKASDSRFLLDLTYLEANQNYKIEFIYKN
                     IPIVLEFQTGWIENFTYKAQLEQDEEKAYLHLNYSFGSTYNWQFEDKTQEGLKITLDG
                     KDLAFSLGEFSLDTDDIKLLDRPQELVLTYDEKIMGFKEAKVLQFQIPSKSKNNDFRL
                     ISAEEKDQIATLKFSKELAENQAFQDFIQISPELNFRAWSIGKELKISANFEPGEKYK
                     VKIAKGLKSNQGLINQGEEANIILQKDLDPSLVFANDGVFLPSGAEYQVYIKSRNVKK
                     IHLKVSQIFANNISEYLRYKNLVGKKDDSTQEAFYSSDGFNYVAKNVIDKKIELKNQK
                     NTWINTALDLSDLKGKTGIFSVSLSVDANDLDYKGENVYRIINKASVSKNLIFSNIAL
                     SAQNLNKQLVVHARDFSKNEALENVKIELVSKQNQILQSQNTNSNGDVKFQIQEDDEI
                     LYILASKKNQISVLRFSNPLSTDGYDVEGDQNHEMIKAFIYTDRGVYRAGDSVHLSVV
                     ARENTNPLKHPISFTLINPKNQKVIENQILKSQNDIYYTQIHLDKNAINGLYRAIFNI
                     AGVEFSKDILVQSVVPNRIKVELNADENRSLDDGNLNYELSSKYLFGALASNLKYQSF
                     VYFSPKNYHNSKYKDYIFINPSSLIIRASADDKGNLDEKGRVQSSVEIPENILNSQGY
                     NFNARIVSEVFEKGGRSVKAVRDVNLNRYDYFVGMKALTNSYVSEGETIDFYAIVSDL
                     KENLVSGKTLEYRIYQNDYYWWWDYDSYDEFLRSIKQDHNTKLIEKGELTSSSEPMKF
                     SFNTSNYYGQMFIELIDKESGISAGQSFYVSSWGEPSYADVVSSLKIKSDKNKYKIGQ
                     SAKIEFESVAGAKALITLSSNSKIIDRFVMDTQGESTSIELAMKKEYAPNIYVSVSLF
                     QDYNKIDNDRALRLFGVIPLYVEDENTKLNLELKTPDKILPNSDFEIEIQSKDKRAFN
                     YTVAIVDEGLLDLTDFKTPDIWEGFYAKTGFTLKTYDTYSQIIPKFTGGDSVSKIGNL
                     RADKNRDDSAQRFKPVVLFNAPARSDEAGFAKLKFKMPSYMGLVRVMVVANENDAYGS
                     ISKDMQVSAPLVLLETLPRTLKIGDNFTLLTQIFKTENRIKNATLSVRSKNSLIKISP
                     DTQAIDFKNATNLEVIMDANVSDNRIGKELLEFELKSENYTYKNEIEIDIKPINAYTY
                     ENNTSLIKAGESKEFIIKDYILGTTNATLKLSPTPILDMDKRIKYLLNYPYGCIEQTT
                     SAVLPQLFLDKFSTEFDKQKAINNINAAIERYANFQTADGGFAYWQGGDESNAWGSNY
                     AGMFLILAKQNGYFVPDSMYERWLKYEQNFVQKSIYHDYMMDIKANSLYLLAMAKKPN
                     ISEMNLLYDSLNTLSTEAKWQLAAAYKLAGVEDTAKQIASKISIEPDSKYSSYTYGSL
                     IRDEAIIANAYKQIYGTNNEELLQKISDTLLSKDYLSTQSTGYALYALAMGANLENMN
                     ENFMDATLKIGDQVHTIDQNQMQIFSFNNEKAIINANKDIFVSFGVEGVKAGENSAFS
                     NKISLDRAFYDEKGNKISPSEIGSGQTFYMRISASLNEGANYVSNIALTQILPSGWEV
                     SNTLLDDNTPSFIKNSSYDFIDVRDDKIMWFFSLNKNRTHHFYIKLNAITPGSYTLSG
                     AYVEAMYDDTYRALSESEKVVVKR"
     gene            7639..7992
                     /locus_tag="ACJE1S_001290"
     CDS             7639..7992
                     /locus_tag="ACJE1S_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806832.1"
                     /translation="MKKGILIASALLTGSMLLADSVKLQGTIAEVYDNNKTLLIDSIY
                     GGQMAVRILPNTEIDMDNCGIFGMDKHGKFKDLKVGDFLEVKLYYPGYSSNPTQAPAI
                     PVAREIDIECYKKAY"
     gene            8095..9243
                     /locus_tag="ACJE1S_001291"
     CDS             8095..9243
                     /locus_tag="ACJE1S_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806833.1"
                     /translation="MKKLLIIPIIIFLCFIAQIFYMGHINESFFYNLTQTQNPYYEIK
                     NINFHKGFLNSKADFTIEDKYNLGLISKLDFKFNNNYFSKFIAQGKLSNPFKLLDDKL
                     QNKELAWFKIQSIQNDLNVSIQFQDINLSNEGGNALWENVLTEILLDKEDLKIKAIYS
                     KIGQVDFSQFYAKFYLKNLDHQQKFEKPISFSNLIQFNESVEEFKFDFCEINNHTISS
                     FYNKNIIYFDDDNQTLKMHSQGKANNLNIDLTSQIYQSIDFDQINFDLIYSQKKPDIS
                     DDKLIFKPSNEELNLQIQNITLKKDNQDINIKGNIFLSMQSHKAHIQISSLKSPDEIF
                     TWGQFFGGLNQYFIKNEEGMFIMDLHYDSDTKTQLKINGNEFTDINLN"
     gene            9243..10424
                     /locus_tag="ACJE1S_001292"
     CDS             9243..10424
                     /locus_tag="ACJE1S_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HGG0806834.1"
                     /translation="MSLALNFRPKTLDEILGQQELVEVFKKFISMQKLPHSLFFGPAG
                     CGKTTFARVVAKDFGLDFYEFDGGNFKLEDLRKIIENYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRCIVIGASTENPYFVLSSGIRSRSMLFEFKNLGQKDLELLLERVQQ
                     KIAFKIEDNAKEFLLKSFDARAMLNLLEFALVLNEKEITLENLKKLRNGVNSEGVSSK
                     DTHYILASALIKSLRGSDVDAAIYYLARLIDAGESADFIARRLIIFASEDISNADPNA
                     LNLAVSTLTAVKNIGYPEARIILSQCAVYLASAPKSNSSYNAINKALDYVKNNPALEI
                     PNYLNNNHPEKKNYLYPHNFGGWVKQNYLSANLKFYESKGIGEEARLLENLSKLKNIK
                     S"
     gene            10494..11222
                     /gene="dapB"
                     /locus_tag="ACJE1S_001293"
     CDS             10494..11222
                     /gene="dapB"
                     /locus_tag="ACJE1S_001293"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HGG0806835.1"
                     /translation="MINIGIYGAKGRMGKQIEECLKSETKAKAAALFDKGDNLEEFFE
                     KSDVIIDFSSQNGTHELLNYARTMPKPLVIGTTGLDEKTLHLMQNASEVMPVFYATNM
                     SLGVAVLNHLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQGVAKARNLDLEK
                     VRISGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEEGEFLELNHTATSRATFAKG
                     AIKIAIWLNAQKPKMYSINDFLGI"
     gene            11224..12561
                     /gene="purF"
                     /locus_tag="ACJE1S_001294"
     CDS             11224..12561
                     /gene="purF"
                     /locus_tag="ACJE1S_001294"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HGG0806836.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKTIKT
                     IKAKGEVNQIFNPENLKTLEGEIAIGHNRYSTAGNSSLNDAQPVAATSVLGDIALAHN
                     GNLVNKEKVRSKLIEDGAIFQTNMDTENVVHLIARSKKESLKDRFIESLQKCIGAYCF
                     VLASKDKLYVVRDPYGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMIIF
                     TQGNDKFESIELFKQEPRICAFEYIYFARPDSIIEGKSVYEIRKKMGEALAKKFTHSA
                     DFVVPVPDSGVSAAIGFSQYLKIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     HKVLKDKEIVVVDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNLEEVREYVEADSLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(12565..13378)
                     /locus_tag="ACJE1S_001295"
                     /pseudo
     CDS             complement(12565..13378)
                     /locus_tag="ACJE1S_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002792006.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysostaphin resistance A-like protein"
BASE COUNT         4824 a         2247 c         1841 g         4640 t
ORIGIN      
        1 tgctcaccgc tttgagaaat aataaaaagc tgatatttgc cttcttttaa atttaaattt
       61 tgcgtatttt catctccctc ataaataagt ttttgattta aataccaaaa aagcttttca
      121 ttatttaaat tagctacttt tgccacaaga cctttcattc catttaaatc tttggctaaa
      181 ataagtttta aattatcttt aggatagata atcttaacac cctttttatt tgaaaattta
      241 aaatttcttt gctgaaagaa atagagtgca taagcaggaa aatcaagctt tatcaatgct
      301 tttgcatctt taaaatgaat atccttagaa tcaagctccc taccttgata ctcataaact
      361 tttttcaaaa aaggggaagt tcttaaaata tttgcccctt taggatataa aacattaata
      421 taacttgtat ttaaatcctc atcatatcta tatttactga tactatctaa cttgattgtc
      481 atcaaatcat caggcggcgc aaattccaaa tccacctcat ctaaaagtcc taaaatctca
      541 aaaagcaaat ctcctgctat actcacgcca tataaatttg cattagcttc accgctaaaa
      601 tttcctaccc aaactcctaa ggtatatttt ggagttgcgc ccatggccca agcatctttt
      661 ctaccataac ttgtgcccgt cttccaagaa ataatttttt ctttattgta attttctaaa
      721 cccactcttt gaagttcttt cattgcttct aaggttaaat acgcactacc cttagaaaac
      781 attcttgcta ctccgcttaa attttcatct cttataaaag aaagattggt aagctctcca
      841 taatttgcca aacccaaata aagttttata agatcctcaa gactcaattc tttagttcct
      901 aaaataagcg aaagcccata tcgcttgtaa ttctcatctt caaaatttaa aaaagctttt
      961 aatttataaa aaaatttttc ataaccataa tcttgcaaaa gcgatacaaa aggaacattc
     1021 aaagatcttt gtaaagcttc ttttgcactg attatcccat aatatttttt atttgcattt
     1081 tggggattga aattagaaaa aaaggttgga acatcaagca aaattgaatc cggtgcgata
     1141 atgccttcat caatacttaa agcatacaaa aagggtttta aagtagaacc cacactgcgc
     1201 ttggcaatat ttccattaat ttgtcctaaa tttgccatat cataaaaatc ttgcgaaccc
     1261 acataagcta aaactttgcg tgttttagta tcggctaaaa taatggctaa attttgtatg
     1321 cctttttgtt gcaaagtata agaaaattct ttagcctttt tttcgatttt aagttgaatt
     1381 tttttatcta tgcttgaaaa aatttcttta ttatcatcac ttaaaagtct taaagcaaga
     1441 tggggtgcaa tatttttgcg aggcttaaaa tttggcaagg gctcttttaa agaaagttcg
     1501 taaatatctt tgttgattaa ctttctttca taaagttttg ctaaaagttt gttgcgttta
     1561 tctaaaagtt tcgtcttatt tttttctaaa ttaataagtc ctggttgatt gggtaaaatc
     1621 gcaagcaaag cagcttgagc ccaagttaaa tctttaggat ttttatcaaa ataaaataaa
     1681 atagcagctt cataaccgat taaattcccg ccataaggag cattgcttaa ataaagcttt
     1741 aaaatttcat ccttactgaa ggcattttcc aaagctaagc tttgtataat ttcattgaat
     1801 ttattaaaat aagttctatc ttttttatcc caaagcttaa tcgtttgcat actaatagta
     1861 cttgcaccac ttctttgagt agaattaaaa ttatttacaa aagcccgcat taaagctaaa
     1921 aaatctactc caaaatgaga ataaaatttc ctatcttcat aattaatcac agcgactttc
     1981 aaacgcttgg gaatatcagt gctcttgata tgccattgct cttcatcatt taaaaaaaca
     2041 cttaaaattt cgccattttt atcgtataaa atcttactat aacggctttt aaaatcatcc
     2101 agtaaggtat ttttatcaaa agaaaaatat acataaaaaa cataagtaag aaaaaaaagt
     2161 agcaaaaagc taaaaatttt taaagcattt ttcatgtttt atttagcgtt tcacaactac
     2221 tttttcactt tcacttaaag ctctataagt atcatcatac atcgcttcta cataagcacc
     2281 acttaaagta taacttcctg gagttatggc attaagtttt atataaaaat gatgcgtgcg
     2341 atttttattt aaactaaaaa accacatgat tttatcatcc ctaacatcaa taaaatcata
     2401 gcttgaattt ttaataaaac ttggagtgtt atcatctaaa agcgtattgc tcacttccca
     2461 accgcttggt aaaatttgtg ttaaagcgat attagaaaca taatttgcac cctcatttaa
     2521 gctcgctgaa attctcatat aaaaggtttg tccagaacca atctcgctag gactgatttt
     2581 attacccttt tcatcataaa aagcacgatc taaactgatt ttattgctaa aagctgaatt
     2641 ttcacccgct tttaccccct ctactccaaa acttacaaat atgtctttat tcgcatttat
     2701 aatagctttt tcattattga aagaaaaaat ttgcatttgg ttttgatcga tagtatgtac
     2761 ttgatcacct atttttaaag tcgcatccat aaaattttca ttcatatttt ctaaatttgc
     2821 acccatggct aaagcatata aagcatagcc tgtactttgt gtggataaat aatcctttga
     2881 aagtaaggta tcgctgattt tttgaagtaa ttcttcatta ttagtgccat aaatttgttt
     2941 ataagcattt gcgataatag cctcatctct tattaaagaa ccataagtat aagaagaata
     3001 tttagaatca ggctctatag aaatcttgct tgcaatctgt tttgcagtat cttcaacacc
     3061 tgcaagttta tatgctgcag ccaattgcca cttagcttca gtgcttagcg tatttaaact
     3121 atcataaagc aaattcatct cgctgatatt aggttttttt gccatagcca aaagatataa
     3181 tgaatttgct tttatatcca tcatataatc atgatatata cttttttgaa caaaattttg
     3241 ctcatatttt aaccatcttt catacatgga atcaggcaca aaatacccat tttgcttagc
     3301 taaaatcaaa aacattcccg cataattact tccccaagca ttgctttcat ctcctccttg
     3361 ccaataagca aatcctccat cagcggtttg aaaattggca taacgctcga tggctgcatt
     3421 gatattatta atcgcttttt gcttgtcaaa ttccgtgcta aatttatcta aaaaaagttg
     3481 tggcaaaact gctgaggtag tttgttctat acagccataa ggataattta acaaatactt
     3541 aattctttta tccatatcta aaataggtgt aggcgaaagc tttaaagttg catttgtagt
     3601 ccctaaaata taatctttta taataaattc tttactttct cctgctttaa tcaaactagt
     3661 attattttca tatgtataag cattgatagg tttgatatcg atttcaattt catttttata
     3721 agtataattt tcacttttta attcaaattc taaaagctct ttaccaatcc tattatcact
     3781 tacatttgca tccattatca cttctaaatt agtagcattt ttaaagtcta tagcttgagt
     3841 atctggactt atttttataa gagaattttt acttcttacg ctcaaggttg catttttaat
     3901 acgattttct gttttaaaaa tttgagttaa aagcgtgaaa ttatcgccta tttttaaagt
     3961 ccttggcaga gtttcaagca acacaagagg tgcacttact tgcatatcct tagaaatact
     4021 accataagcg tcattttcat tggccacaac catcacacga accaaaccca tataagaagg
     4081 cattttaaat ttaagttttg caaagcctgc ttcatcgctt cttgcaggag cattaaaaag
     4141 cactacaggt ttaaaacgct gtgcgctatc atcacgattt ttatctgctc ttaaattccc
     4201 tatctttgaa acactatcgc ctccggtaaa tttagggata atttgactat aagtatcata
     4261 agtttttaaa gtaaatcctg tttttgcgta aaagccctcc caaatatcag gggttttaaa
     4321 atctgttaaa tcaagaagtc cttcatctac aatagccaca gtataattaa aagctctttt
     4381 atctttgctt tgaatttcta tctcaaaatc actattaggt aaaattttat caggagtttt
     4441 taattctaaa ttaagctttg tattttcatc ttctacatac aaaggaatta caccaaaaag
     4501 ccttagggca cgatcattat caattttatt ataatcttga aataaactca cgcttacata
     4561 gatatttggt gcatattctt ttttcatcgc caattctata ctcgtgcttt caccttgagt
     4621 atccatcaca aaacgatcaa taatcttgga attagaactt aaagttatga gtgctttagc
     4681 tcctgcaaca ctttcaaatt ctatttttgc actttgtcct attttatatt tgtttttatc
     4741 acttttaatt tttaaagaac tcaccacatc agcatagctt ggctctcccc aagagcttac
     4801 ataaaaactt tgccctgcgc ttattccact ttctttatct ataagctcaa taaacatttg
     4861 tccataataa ttgcttgtgt taaagctaaa tttcataggc tcgctagagc tagtaagctc
     4921 ccctttttca ataagtttgg tattgtgatc ttgcttaata gagcgcaaaa attcatcata
     4981 agaatcataa tcccaccacc aataataatc attttgataa attctatact ctaaagtttt
     5041 gcctgaaact aaattttctt ttaaatcact tacaatggca taaaaatcga tcgtttctcc
     5101 ctcagataca taagaatttg tcaaagcttt cattcccaca aaataatcat aacgatttaa
     5161 atttacatcc ctaacagctt ttacagatct gccacccttt tcaaagactt ctgaaacaat
     5221 ccttgcatta aaattgtaac cttgagaatt taaaatattt tcaggaattt caacacttga
     5281 ttgcaccctg cccttttcat ctaaatttcc cttatcatca gcacttgctc tgataatcaa
     5341 tgaacttgga ttaataaaaa tataatcttt atatttagaa ttatgataat tctttggaga
     5401 aaaatataca aaactttgat attttaaatt tgaagctaag gctccaaaaa gatattttga
     5461 agaaagctca tagtttaaat tcccatcatc taaacttcta ttttcatcag catttaattc
     5521 taccttaatg cgatttggca ccacactttg aactaaaata tctttgctaa attccacccc
     5581 agcaatatta aaaattgccc tataaagtcc attaatggca tttttatcta aatgaatttg
     5641 cgtatagtaa atatcatttt gactttttaa aatttgattt tctatgactt tttgattttt
     5701 aggattaatt aaagtaaaac ttatagggtg tttgagcgga tttgtatttt ctcttgcaac
     5761 cacacttaaa tgcacactat cacccgctct ataaacccca cgatctgtgt aaataaacgc
     5821 ctttatcatc tcatgatttt gatccccttc tacatcataa ccatctgtgg atagaggatt
     5881 gctaaatctt aaaacactga tttgattctt tttgcttgct aaaatataga gtatttcatc
     5941 atcttcttga atttgaaatt tcacatctcc attagaattg gtattttggc tttgcaaaat
     6001 ttggttttgc ttacttacaa gctctatttt tacattttct aaggcctcat ttttactaaa
     6061 gtctcttgcg tgaactacga gctgcttatt taggttttga gcacttaaag cgatattaga
     6121 aaaaataaga tttttactga cactagcttt atttataata cgatatacat tttcaccctt
     6181 ataatcaaga tcgttagcat caacacttaa actcactgaa aaaattccag ttttaccttt
     6241 taaatcactt aagtctaaag cagtatttat ccaagtattt ttttgatttt taagctctat
     6301 ttttttatca atgacatttt tagcaacata attaaaacca tctgaagaat aaaacgcttc
     6361 ttgagtgcta tcatcttttt tacccaccaa atttttataa cgcaaatact cacttatatt
     6421 gtttgcaaaa atttgactta cttttaaatg aatcttttta acattgcgcg atttgatata
     6481 aacttgatat tctgccccac taggcaaaaa taccccatca tttgcaaaaa caagacttgg
     6541 atctaggtct ttttgtagga tgatatttgc ttcttcacct tgattgatta agccttgatt
     6601 tgattttaaa ccttttgcga ttttaacttt atacttttct cctggctcaa aattagctga
     6661 aatttttaac tcttttccta tactccacgc tctaaaatta agctcgggtg atatttggat
     6721 aaaatcttga aaggcttgat tttcagctag ttctttagaa aattttaaag tagcaatttg
     6781 atctttttct tctgcactaa tgagtctaaa atcattattt tttgatttgc taggaatttg
     6841 aaattgaagc actttggctt ctttaaaacc catgattttt tcatcataag ttaaaacaag
     6901 ttcttgaggt ctatctaaaa gcttaatatc atcagtatca agactaaatt cacccaagct
     6961 aaaggctaag tctttgccat ctaaagtgat ttttaaacct tcttgtgttt tatcttcaaa
     7021 ttgccaatta taagtgcttc caaagctata atttaaatgc aaataagctt tttcttcatc
     7081 ttgctctaat tgagctttat aagtaaaatt ttctatccac cctgtttgaa attctaaaac
     7141 aataggaata tttttataaa taaattctat tttataattt tgattagcct ctaaataagt
     7201 taaatctagt aaaaatctag agtctgatgc ctttgtaagt agaatttttg aatttttaga
     7261 attgattttt gcatcaatac tcatttcatc aaaatcaaca atagcttctt taaattcaac
     7321 aaaaattgct tcatgatttt ttagaagtcc ttgagattgt gcacgaatta actcgcttga
     7381 attcttattt ttctcaccgc cacacgcgat caataaaaaa gataaaatca aactaatcaa
     7441 tatatttttt aacattaata ttcctttgaa aaattaagct cgacattatt taagatattc
     7501 tacttacttt taattaaaaa ttcattgata ttttttaaaa actcaaatca aatatctaaa
     7561 aaattatatt ttatccaatt tcacactcac ttcacttaaa aattttataa tgtcatcact
     7621 tttaaaaaag gagacaaaat gaaaaaaggt attttaatcg catcagcact tttaacaggc
     7681 tctatgcttc ttgcagatag tgtaaaactt caaggtacta tagcagaggt ttatgataat
     7741 aataaaactt tacttataga ttcaatctat ggcgggcaaa tggctgtaag gatattgcca
     7801 aatactgaaa ttgatatgga taattgtggg atttttggaa tggataaaca cggaaaattc
     7861 aaagatttaa aagtaggaga ttttcttgaa gtaaaacttt actatcctgg atattcatct
     7921 aatcctactc aagcacctgc gattcctgta gcaagagaaa ttgatataga gtgttacaaa
     7981 aaagcttatt aatttgctta ctttttagta agcaaattta atttcttcaa aatttaaact
     8041 ttttttagca aggaatttgt aaaatagtac ttaaatttgt ttaaggaaaa aagattgaaa
     8101 aaactactta taattcctat tattatcttt ctttgcttca ttgcgcaaat tttttatatg
     8161 ggacatatta atgaaagttt tttttataat cttactcaaa cacaaaatcc ctattatgag
     8221 ataaaaaata tcaatttcca taaaggtttt ttaaattcaa aggctgattt taccatagaa
     8281 gacaagtata atttaggttt aatttcaaag cttgatttta aatttaacaa taattatttt
     8341 tcaaaattta tagcacaagg aaaacttagc aatcccttca aactcttaga tgataaatta
     8401 caaaataaag aattagcttg gtttaagata caatctattc aaaatgatct taatgtatca
     8461 attcaatttc aagatatcaa tttaagcaat gaaggtggaa atgcattatg ggaaaatgtt
     8521 ttaactgaaa ttttactgga taaagaagat ttaaaaatta aagctattta ttcaaaaata
     8581 ggtcaagttg atttttctca attttatgca aaattctatc taaaaaacct agaccatcaa
     8641 caaaaatttg aaaaacctat atcgttttct aatttaatac aatttaacga aagtgtagaa
     8701 gagtttaaat ttgatttttg cgaaatcaat aatcatacaa tctcttcatt ttataataaa
     8761 aatatcattt attttgatga tgataatcaa accttgaaaa tgcattctca aggcaaagca
     8821 aataatctaa atatagattt aacttctcaa atttatcaaa gtattgattt tgatcaaatc
     8881 aattttgatc tcatttatag tcaaaaaaaa cctgatattt ctgatgataa attgattttt
     8941 aaaccttcca atgaagaatt aaacttacaa atacaaaata tcactttaaa aaaagataat
     9001 caagatataa acatcaaagg aaatatcttt ttatcaatgc aaagtcataa agctcatatt
     9061 caaatttcta gtttaaaatc gcccgatgaa atctttactt gggggcaatt ttttggaggt
     9121 ttaaatcaat actttataaa aaatgaagag ggtatgttta tcatggatct tcattatgat
     9181 agtgatacta aaactcagct taaaatcaat ggcaatgaat ttacggatat aaatttaaac
     9241 tgatgagttt agctttaaat tttcgtccca aaaccctaga tgaaattcta ggccaacaag
     9301 aacttgtaga agtatttaaa aaatttatca gtatgcaaaa acttccccat agtttatttt
     9361 ttggacctgc aggatgtgga aaaacaacct ttgctagagt tgtagctaag gattttgggc
     9421 ttgattttta tgaatttgat ggtggaaatt tcaaacttga ggatttaaga aaaatcatag
     9481 aaaattacaa aaacagcctt tataaacctc ttatttttat cgatgaaatt catcgcttga
     9541 gtaaaactca acaagaaatg cttttaattc ctatggaaaa ttatcgctgc attgttatag
     9601 gtgcaagtac tgaaaatcct tattttgttt taagttcagg cattagaagt cgctctatgc
     9661 tttttgaatt taaaaatctt gggcaaaaag atttagaact tttattagag cgagtacaac
     9721 aaaaaatagc atttaaaata gaagataatg ctaaagaatt tttactaaaa agcttcgatg
     9781 ctagagcaat gttaaattta cttgaatttg ctttggtttt aaatgaaaaa gaaatcactt
     9841 tagaaaattt aaaaaaactt cgcaacggag taaatagcga gggtgtaagc tcaaaagata
     9901 ctcattatat tttagcaagt gctcttatta aaagtttgcg cggaagcgat gtggatgctg
     9961 ctatttatta tcttgctcgt ttaattgatg caggagaaag tgctgatttt atcgctaggc
    10021 gtttgattat ctttgcaagt gaagatatat ccaatgccga tcctaatgct ttaaatttag
    10081 ccgtttctac tcttaccgca gtaaaaaata tcggctatcc tgaagcaaga attatacttt
    10141 ctcaatgcgc tgtctatcta gcaagtgctc caaaatcaaa ttcaagctat aatgctataa
    10201 acaaggcctt agattatgta aaaaacaatc ctgcacttga aatccccaat tatttaaaca
    10261 ataatcatcc tgaaaagaaa aattaccttt atccgcacaa ttttggcgga tgggtgaagc
    10321 aaaactacct gagtgcaaat ttaaaattct atgaaagcaa gggcatagga gaagaagcga
    10381 gattgcttga aaatttaagc aaattaaaaa acatcaagtc ctgatttctt ataaaaaatt
    10441 tacaaaataa atgttaaaat gcaattttat ctttaaggaa aaaataagac acaatgataa
    10501 acataggaat ttatggcgct aaagggcgca tgggcaaaca gatcgaagaa tgtttaaaaa
    10561 gtgaaactaa agcaaaagca gctgcacttt ttgataaggg tgataattta gaagaatttt
    10621 ttgaaaaaag tgatgttatc atcgacttct catctcaaaa tggcactcac gaactcttaa
    10681 attacgcaag aacaatgcca aaacctttag taattggcac aacagggctg gatgaaaaaa
    10741 ccctgcattt aatgcaaaat gcaagcgaag taatgcctgt tttttatgcg actaatatgt
    10801 ctttaggggt tgcagtttta aaccatctgg ctagcaaagc aagccaaatg ttaagaaatt
    10861 ttgatataga aattttagaa atgcaccatc gtcacaaaaa agacgctcca agtggtactg
    10921 ctatgacttt agcacaaggt gtagcaaaag ctagaaattt agatcttgaa aaagtaagaa
    10981 tcagcggaag agatggtatc ataggcgaaa gaagcaaaga tgaaattgcc gtgatgagtc
    11041 taagaggtgg agatattgta ggacgccaca ctgtgggctt ttatgaagag ggtgaatttt
    11101 tagaattaaa ccataccgca acttcaagag caacttttgc taaaggagcg attaaaatcg
    11161 ctatttggct taatgcacaa aagccaaaaa tgtactcaat taatgatttt ttaggaattt
    11221 aaaatgtgtg cagtagtagg agttataaat tcaaaaaatg caagtactta tgcttactat
    11281 gctctttttg ccatgcaaca ccgaggacaa gaagcaagcg ggattagtgt aagcaatggt
    11341 aaaactatca aaactatcaa agccaaaggc gaagtaaatc aaatttttaa ccctgagaat
    11401 ctaaaaaccc tagaaggtga aatcgccata ggacacaatc gctattctac cgcgggaaat
    11461 tcaagcttaa atgatgccca acccgtagct gcgacttcag tcttagggga tattgcttta
    11521 gcacacaatg gaaatttagt caacaaagaa aaagtaagat caaaactcat cgaagatgga
    11581 gctatctttc aaaccaatat ggatactgaa aatgtcgttc atctcatagc aagaagtaaa
    11641 aaagaaagct taaaagatag atttatcgaa agtttgcaaa aatgcatagg ggcttattgt
    11701 tttgttttag caagtaaaga caagctctat gttgtaagag atccttatgg ggtgcgtcct
    11761 ttatctttag ggcgcttaaa agatggaggc tatatcgtag caagcgaaac ttgcgctttt
    11821 gatcttatag aagcagaatt tatacgcgat gttaaacctg gagaaatgat tattttcact
    11881 caaggaaatg ataaatttga aagcatagaa ctttttaagc aagagcctag aatttgtgct
    11941 tttgaatata tttattttgc tagacctgat agcattatag aaggaaaaag cgtgtatgag
    12001 atacgcaaaa aaatgggcga agctttggca aagaaattta ctcatagtgc tgattttgta
    12061 gtgcctgttc cagatagtgg cgtaagtgct gccataggct tttcacaata tttaaaaatt
    12121 ccacttgaaa tggctatagt tagaaaccat tatgtaggta gaacctttat cgaacctact
    12181 caagagctta gaaatttaaa agttaaatta aaattaaatc ctatgcataa agttctaaaa
    12241 gataaagaaa ttgtcgtagt agatgatagt ttagtgcgtg ggacaacttc taaaaaaatc
    12301 atttccctac ttcgtgccgc aggtgcaagt aaaattcact tggccatagc ttgccctgaa
    12361 attaaatttc cagatactta tgggatcgat actccaacct ttgaagaact cattagcgct
    12421 aataaaaatt tagaagaagt acgcgaatat gtggaagcag attcacttag ctttttaagt
    12481 atcgaagaat taactcaaag cataggggat gagagaaaat attctttaat tagctttgat
    12541 ggagattatt ttatcaaata atctctattt tacataagag ggataagtaa agaaaaacaa
    12601 atgtgttaaa tttaaaccat aatgaaaaaa tacactaagc cacaaactct tactatatct
    12661 ccaagccatt ccataaatca aacctgccaa agaagcaaag attatcatca aactacctgc
    12721 tttataatgc gccgctccaa atgccaaact tgcgactaaa agcggctcct acacccccta
    12781 tcaaaccttg taatctttgt tgtaaataac ccctaaaaaa tgcttcttca accaaagcaa
    12841 ccaaaaataa attagaaaat aaaaaataca ctatccaaga aggaaagcct atttccattt
    12901 taattacacc caaataccaa gggatagata aaagtaaaaa aggacttgca aacaataacg
    12961 ctgcttgaaa taattttggt tttattctat ttaaattctc aaacaaactt ggcataagca
    13021 aaaagagtaa aaaaacaccc aaaggcttat caaaactaaa atacaaagta aaagcgctac
    13081 tatgctcact tgcatgaact ttatctagaa tttttacatt attaacacct ggaataaaat
    13141 gcaaaaataa aagcaagcaa aatgccacta tcaaaagctc taaaaataca tttttattat
    13201 ttttataata caaggacaat aaaaaaaata cacccacaaa aacaataaaa cttatttcta
    13261 tgatattatg ataataagcc aaaaatccac tgattaccaa tgctacaaaa gataatttta
    13321 tttttttaaa tgagagcaag gccaaagcta aggctaataa gataaaagtt aagatcatat
    13381 tttatttctc ttttttttaa tttcatcaaa tttcgcaaaa atagtatcac ttaaaaaatt
    13441 aaatatctat aaaaatcact catataagtg attaaaaaaa cccaagcaaa gcttgtgtca
    13501 atcataaaaa atatgaattt atcataaata aacaatttaa tttttaaaat ac
//
LOCUS       DBBXOW010000047        13542 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.048, whole genome shotgun sequence.
ACCESSION   DBBXOW010000047 DBBXOW010000000
VERSION     DBBXOW010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13542
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.048"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            8..1381
                     /locus_tag="ACJE1S_001296"
     CDS             8..1381
                     /locus_tag="ACJE1S_001296"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HGG0806837.1"
                     /translation="MARKKGKIYLYLLVLVLIGVLAFFISKTNAFETTPPKILMPDII
                     YSDLKKPISVHVKDDEGSIESVQIFLQKEGNETGMPIADEKIQNSNDITLQVALPKLA
                     YKEKVKSFIMEIKAKDKSFWNFFGGNEASKQVLIMIDDSAPKVNVLSNSYQIEQGGAA
                     SVVFSASDANLDKVYIETNTGKIFQATPYLKEGYYAALIAWDARDEEFRAYIIATDKA
                     GNITKERIRYYFVNRKYRVSNINLTDRFLDGKIEDLAQEYAPKDNNFTRFEKFKFVNE
                     TLRGNNEILIHKITSEVPESKIDDFKIDLFLPLRNGMKVADFADHRYYSYNGQFVSDS
                     YHMGIDLASVAEAPIISNNSGKVVFAEENGIYGLNLIVYHGFGVYSLYGHCSSKSVEL
                     DDILSKKSVIGRTGVSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNEGK
                     KIILGKN"
     gene            1381..2265
                     /gene="lpxC"
                     /locus_tag="ACJE1S_001297"
     CDS             1381..2265
                     /gene="lpxC"
                     /locus_tag="ACJE1S_001297"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HGG0806838.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ATYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGDKYVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRDMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYISYAGSHHLNHLLTKEVLKDKDAY
                     EIVTLEKANEKAYEKVFA"
     gene            2304..2705
                     /locus_tag="ACJE1S_001298"
     CDS             2304..2705
                     /locus_tag="ACJE1S_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HGG0806839.1"
                     /translation="MIGIYQDDKLVKSIESEEKASEFVPKILKILLKEFSFDELIYAN
                     GPGSYMGIKISYVSLRTLSIVKNIPLFAISAFELNNNQPIAAHKNMCFVKKEDEIILE
                     ENTAGEFFLPPNLSKLNKKDDNLPFYFLSAI"
     gene            2723..3601
                     /gene="thrB"
                     /locus_tag="ACJE1S_001299"
     CDS             2723..3601
                     /gene="thrB"
                     /locus_tag="ACJE1S_001299"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HGG0806840.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLTLFNHTIIEKSNFFSISVNGE
                     GSENLSLKKNNIFVSIFNEIYQRLSGRKDHFRFIFDNAIPLSRGLGSSSAVIIGAIAS
                     AYEMAGFKAEKEKILNEALKYENHPDNIAPAALGGFVVSMVENEKVFSIKKDLDENLN
                     AVVVIPNVAMSTEQSRNALPSNLSLKDCVFNLCHSSFLTACFLEKKYDLLALASKDLL
                     HQTRRMQNLPELFEVQKFALENKALMSTLSGSGSSFFNLAYKDDAKHLAQKMEQKFRN
                     FKILCLEFDNKGFKIC"
     gene            3655..3888
                     /locus_tag="ACJE1S_001300"
     CDS             3655..3888
                     /locus_tag="ACJE1S_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF448 domain-containing protein"
                     /protein_id="HGG0806841.1"
                     /translation="MCIVCKNRYLQKNMHRFKHFQGELYKDFAFGRSVYLCETCILSE
                     GKVLQKAFFKSCKNLNTKITQQNLKEIVLNGKN"
     gene            3875..6445
                     /gene="infB"
                     /locus_tag="ACJE1S_001301"
     CDS             3875..6445
                     /gene="infB"
                     /locus_tag="ACJE1S_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HGG0806842.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLNIKTASNAVEPEVAA
                     GIYEYIQTKIIPEAFKKNLKQDPVKKAKAAPKEEKKEEKSPKEVETKAPAKVVEEVKP
                     EPKTPEEPKENIQESLASATLAKRRGLVIVKKKKDEEEAAKKEEPKASTPSNEERLSL
                     KTMFSNADENLKKKKKEKKPFVATKKESAEKMDFLEGHDFADISLEDEDVVVLPDFSV
                     KEQEKPQNTMKKPPNFLRQAVGNSANLGLEGGIQRRSRKKPPKKVEKKENEAVSSVEI
                     SKEIRVYEFADKIGKSVSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFGIEINIINE
                     ADEFDYVKDYEEEVDEKDLVSRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQ
                     HVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAIN
                     HAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIE
                     DLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATIIVQNGTLTVGSTVVAG
                     EAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKSDKEAREYANKRH
                     EYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRNDEI
                     KVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEIKERAKDKGVEIKTYNVIYN
                     LLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVTEGVINRGAKIRLI
                     RDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDYIESYKEVEEQASL
                     "
     gene            6442..6804
                     /gene="rbfA"
                     /locus_tag="ACJE1S_001302"
     CDS             6442..6804
                     /gene="rbfA"
                     /locus_tag="ACJE1S_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HGG0806843.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            6794..7237
                     /gene="rimP"
                     /locus_tag="ACJE1S_001303"
     CDS             6794..7237
                     /gene="rimP"
                     /locus_tag="ACJE1S_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HGG0806844.1"
                     /translation="MNLEALCKEVNLELYDSELTSENGKKIYRVYVMKPLDEKGERRG
                     VNLDDCARLSEILSPIFDVEPPVSGEYFLEVSSAGLERKLSKIEHFAKSINELVKITT
                     GEKEKIEAKIISVEDENITLENLENQEKTTLKFSDIKKARTFIQW"
     gene            7311..7598
                     /locus_tag="ACJE1S_001304"
     CDS             7311..7598
                     /locus_tag="ACJE1S_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806845.1"
                     /translation="MLEDKYDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQEGRLIDEFHTKSQGYRWTSPVFNYLKTMNKNGKDFYRYYKNCKLFAIVD"
     gene            7610..9685
                     /locus_tag="ACJE1S_001305"
     CDS             7610..9685
                     /locus_tag="ACJE1S_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrB family protein"
                     /protein_id="HGG0806846.1"
                     /translation="MIEFLNEDRKKFKEYLIDFFHNAYNSDKLSSKDEIVNFDFLKNY
                     GFCVKLSYGKGTISKIPWIIFIRTDTQEYKASYGIYVYCGIKRENGEIIVCIGESEDK
                     TINYLAKNKVDDYNTQFNKKTYDYKNLNNDIDLIIDKIIENMQWFAKLPLNEIQDRND
                     LSKSNNKEIRNDGSEMSNKKENKNLSLNQILYGPPGTGKTYHTIDKALEILGENLESR
                     DRDEKKAKFDEYVKDGQIVFTTFHQSYGYEEFVEGIKPMMNNEANSQEIQYEIKDGIF
                     KDICNRALENYENSNLNTEELREKIKLREKVEKFLNRLLETNEPISKTKGGNFFINSF
                     NNNTIEIYSEDVERFDGIFKLSLSTFITLLKSNIEFNSAVEMFKKVFDRDYADRTHTY
                     YFNLVNKFKEYEKQAVLKTEDNKISSNSLNSYIIIIDEINRGNVSKIFGELITLIEPS
                     KRIGESEELKVTLPYSGKKFGVPKNVYILGTMNTADRSITSLDTALRRRFEFVEMMPD
                     PDLLKNVFICKDVENPNKDEDYLGDDAKTEGFAEILQNILISINKRIEFLLDREKTIG
                     HAFFMSEAVKFNKDNWCKPDKYEEDWYVLSISKLKSIFQNKIIPLLQEYFYNDYALIS
                     VVLNDNGMIEKCEKDDKYLQKIKNLDNVDSEKIIYNIASFDNKIWNDIKTYQAIYNDG
                     ENQSKNDKQ"
     gene            9648..11021
                     /locus_tag="ACJE1S_001306"
     CDS             9648..11021
                     /locus_tag="ACJE1S_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HGG0806847.1"
                     /translation="MMGKINQKMINNNTFSIIEHQAFSKEDLQGIFKEKAKKFYQELE
                     DFAKNNENFLGFKNKNTLTAKNYVGIIQTKSGVLEILPKCTNLDGYKDKECKLSTISK
                     EKLLKNYILNQISQAKTSENFYGEDFAFNPKTLLINMLKTLKNSPFKKSQISSLQISK
                     MPLLEVFIAMFLDELDGVYKKGLKKDYISIEENRNFLKGKLQFSQHLKQNLVHKERFF
                     TQSDEFMLDIAPNRLIKSTLNLLKSKTTHHKFKIIKALEMFDEVGFSTNYEKDFTYKI
                     SRHFDYYENLLSWCKIFLQNQTFAPYKGKNEAFALLFPMEKLFEDYVAHMLKKANPTQ
                     NIKTQSSGKYLISKKGEKCFMLKPDLYIENETILDTKWKIPDSNEDKKHGIAQSDLYQ
                     MFAYACKFKIHDIKLIYPLCERTMSLQNTIKELEFNANEHLVFLNDNSPLKTNIKVQV
                     IFAPLPF"
     gene            complement(11010..11816)
                     /locus_tag="ACJE1S_001307"
     CDS             complement(11010..11816)
                     /locus_tag="ACJE1S_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HGG0806848.1"
                     /translation="MFEILNFTFFQNALLAAVLVSIACGVVGTLVMINRLFSIAGGIT
                     HGAFGGIGIAFYFSLPILISTGIFTLFLAFLVAFLSKRYEHRSDSIVAVIWAFGMAFG
                     IILIDLSPGYSTDLMAYLFGNILAVGMQDLWLMAIVDGVVIVLMLLFYRQFEALSFDV
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGIILIMALLSIPSFIAENFTKKLGLI
                     MILASVLSMIFCVLGLIISYYFNLSSGACIIAVACFGFLIHLLAKFLLKR"
     gene            complement(11809..12663)
                     /locus_tag="ACJE1S_001308"
     CDS             complement(11809..12663)
                     /locus_tag="ACJE1S_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HGG0806849.1"
                     /translation="MLFFEISNINYAYNNETILKNINLSYDSKDFLSIIGPNGAGKST
                     LVKLILGLLKTKKTISFHGIKKNEIGYVPQHTLANPNFCPRVIEIVLMGLVNKKIFGF
                     YSKKDKNKALEALASVGMQDFWDRKINELSGGQKQRVFIARALVDECKMLILDEPTAS
                     VDSKSAIQIFELLSSLHEKGIGILLICHDINLVLAYSDKIAYLNKELFLHTNTKEKDK
                     SVFLKHLYENHSHFCDVEMSLNSCFCDEENCEKKKICEQEFARRNLKKSNFKKENFCL
                     KFSKESHV"
     gene            complement(12676..13530)
                     /locus_tag="ACJE1S_001309"
     CDS             complement(12676..13530)
                     /locus_tag="ACJE1S_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HGG0806850.1"
                     /translation="MKKIFLLFIFLGLFNSFLCAKTLQPSENLNLPLISVSIAPQAFF
                     VKKIAGDTLNINILSTNTHKPKSKSNPMKKLEKSELYFTIGLEFEKKLTDKLEQKFPK
                     VKIIDMQKDIPLAKTSSSNSKEILDPFTWLDPILVQNIALNTYNALVQKYPQNKSLYK
                     HNLDKFLTELDVLNLQISSKLQKVKNKEFITYHPAWSYFAKRYDLVQNHIEFLGKKLK
                     NKDIKNLGALIKEKNIKVIFVQTRFPEKTAKTLEKEYNVKIYKIDYLSYDWENELLKT
                     ANAFYENL"
BASE COUNT         5079 a         1753 c         2489 g         4221 t
ORIGIN      
        1 aaaaaatatg gcgagaaaaa agggaaaaat ttatttatat ttgttagttt tggttttaat
       61 cggtgttttg gcgtttttta tttcaaaaac gaatgctttt gaaacaacac ctcctaaaat
      121 ccttatgcca gatatcattt atagtgatct taaaaaacct atttcagttc atgtaaaaga
      181 tgatgaaggt tctattgaaa gtgttcagat tttcttgcaa aaagaaggca atgaaacagg
      241 tatgcctata gcggatgaaa aaattcaaaa ttcaaatgat attaccttac aagttgctct
      301 accaaaactt gcctataaag aaaaagtaaa atcttttatc atggaaatta aagccaaaga
      361 taagagtttt tggaattttt tcggtggcaa tgaagcgagc aaacaagtcc ttatcatgat
      421 tgatgatagt gctccaaagg taaatgtatt gagcaattct tatcagattg agcaaggagg
      481 tgctgctagt gttgtgtttt cagctagtga tgcaaattta gataaggttt atatcgaaac
      541 aaatacagga aaaatttttc aagctactcc ttatttaaaa gaaggctatt acgcagctct
      601 tatagcttgg gatgcaagag atgaagaatt tcgtgcttat atcattgcta cagataaggc
      661 aggaaatata accaaagagc gcataaggta ttattttgtc aatcgcaaat accgcgtttc
      721 aaatatcaat cttacagata gatttttaga tggcaaaata gaagatttag cacaagaata
      781 tgcgccaaag gataacaatt ttacgcgttt tgagaaattt aaatttgtaa atgaaacctt
      841 aagaggcaat aatgaaattt tgatacataa aatcacttca gaagtgcctg aaagtaaaat
      901 cgatgatttt aaaatcgatt tatttttacc acttcgaaat ggtatgaagg tagcagattt
      961 tgctgatcat aggtattatt cttacaatgg acaatttgta agcgattctt atcatatggg
     1021 tatagattta gcaagcgtgg cagaagctcc tattataagt aataattcag gcaaagtcgt
     1081 atttgcagaa gaaaatggaa tttatggact caatttaatc gtctatcatg gttttggagt
     1141 ttatagtctt tatgggcatt gttcttctaa aagtgttgaa cttgatgata ttttaagcaa
     1201 aaaaagtgta ataggtagaa caggtgtaag tggattggct ttgggggatc atttgcactt
     1261 tggtgtttta gttcaaggtg ttgaaacacg ccctgagcaa tggcaagata aaaaatggat
     1321 agaaaataat atttacaatg ttttaaacga aggtaaaaaa ataattttag gaaaaaatta
     1381 atgaaacaat taactttagc aaaaactgtc aaaggcgtag gtataggact tcacaaaggt
     1441 gagcctatag aaatcacttt agagccttta gaagcaaata gtgggatagt tttttttaga
     1501 agcgatttaa atgctactta taaagcaagc cctgaaaatg ttatcaatac tcaaatggca
     1561 acggttttgg gcgatgaaag gggatttatt tctactatag agcatttaat gagtgcaatc
     1621 aatgcttatg ggatagataa tgtccgcatc gttttaaatg ctaatgaagc acccgtaatg
     1681 gatggatcaa gcattagctt ttgtatgatg cttgatgaag caggggttaa agagcttgat
     1741 gcacctaaaa aaattatggt gattaaaaag cctatagagg taagagacgg tgataaatat
     1801 gtgcgtttaa ctccgactaa agaaccgcgt attaattata ctatcaagtt tgataatgct
     1861 gttataggcg aacaaagcta taattttgaa ttcagtaaga aaaactatat agaaaatata
     1921 gcaagagcta ggacttttgg ctttttaaaa gatgttcaag cccttagaga tatgaattta
     1981 gcactaggtg gaagtttaga aaatactata gtggtagatg aaaatcgtat tttaaatcct
     2041 gaaggtttgc gctttaaaga tgaatttgta agacataaaa ttttagacgc gattggagat
     2101 ttgactttgc ttgggtaccg tgtttttgga gattatattt catatgctgg aagccatcat
     2161 ttaaatcatt tacttactaa agaagtttta aaagataaag atgcttatga gatagtgacc
     2221 cttgaaaaag caaatgaaaa agcttatgaa aaggtttttg cataaaaaat tcattattgc
     2281 ttaatgcctt atctaagcct ttgatgattg ggatttatca agatgataaa cttgtaaaaa
     2341 gcatagagag tgaagaaaag gcaagcgagt ttgtacccaa aattttaaag attttgctaa
     2401 aagaatttag ctttgatgaa ttaatttatg ccaatggtcc aggctcttat atggggatta
     2461 aaatttctta tgtaagtctt aggactttga gtatagtgaa aaatatccct ctttttgcta
     2521 tcagtgcctt tgagcttaac aacaatcaac ccattgccgc tcataaaaat atgtgttttg
     2581 taaaaaaaga agatgagatc atcttggagg aaaatacagc tggagagttt tttttacctc
     2641 caaatttaag caagcttaat aaaaaagatg ataatctacc tttttacttt ttatctgcaa
     2701 tttaaagaat ttaggaaaaa aattgaaaat tttagtacct gctacaagtg caaatttagg
     2761 ccctgggttt gattgtttgg gattgagttt aacacttttt aatcatacta ttatcgagaa
     2821 gtcaaatttt tttagtatca gtgtcaatgg tgaaggaagc gagaatttaa gccttaaaaa
     2881 aaataatatt tttgtaagta tttttaatga aatttatcaa agattaagtg gtagaaaaga
     2941 tcattttaga tttatttttg ataatgccat tcctttatct cgcggacttg gcagctcttc
     3001 agcagtgatt atcggtgcta ttgcaagtgc ttatgagatg gcaggtttta aagcagaaaa
     3061 agagaaaatt ttaaatgaag cgttaaaata cgagaatcat cctgacaata tagctcctgc
     3121 agcacttggg ggctttgtag tatccatggt agaaaatgaa aaagttttca gtataaaaaa
     3181 agatttggat gaaaatttaa atgctgttgt ggttatacct aatgtggcga tgagtacaga
     3241 acaaagtcgc aacgccttgc cttcgaattt aagtttgaaa gattgtgttt ttaatctttg
     3301 tcattcttct tttcttacgg cttgtttttt agaaaaaaag tatgatttgc tcgctcttgc
     3361 tagtaaagat ttattacacc aaacgcgtag aatgcaaaat ttacccgagc tttttgaggt
     3421 gcaaaaattt gctcttgaaa ataaggcttt aatgagtacg ctttcgggtt caggctcaag
     3481 cttttttaat ttagcataca aggatgatgc aaagcattta gctcaaaaaa tggagcaaaa
     3541 atttagaaat tttaaaattc tttgtttaga atttgataat aaaggcttta aaatttgcta
     3601 aaagaagaaa aaaaaagata taattttgta aaagataaac atgagcccat tcgaatgtgt
     3661 atagtctgta aaaatcgata tttacaaaaa aatatgcatc gatttaaaca ttttcaaggt
     3721 gagctttata aagactttgc ttttggacgc agtgtttatt tgtgtgagac ttgtattttg
     3781 agtgaaggca aagtcttgca aaaagcattt tttaaatctt gcaaaaattt aaatacaaaa
     3841 atcactcagc agaatttaaa ggagatagtt ttaaatggca aaaattagaa ttcatgaaat
     3901 tgcgaaagaa ttaggctatg acagcaaaga aattatcgag aaagcaaatg aattgggatt
     3961 gaatatcaaa accgcatcta atgctgtaga acccgaagtt gcagcaggaa tttatgagta
     4021 tatacaaact aaaattatac ccgaggcttt caagaaaaat ttaaaacaag atcctgtaaa
     4081 aaaagccaaa gctgcaccca aagaagaaaa aaaagaagaa aaatcaccta aagaagtaga
     4141 aacaaaagct ccagctaaag tcgtagaaga agtaaagcct gagccaaaaa ctcctgaaga
     4201 gcctaaagaa aacattcaag agagtttagc gagtgcgact ttagctaaaa gaagagggct
     4261 tgtgattgtc aaaaagaaaa aagatgaaga agaagctgcg aaaaaagaag agccaaaggc
     4321 tagcactcct tcaaatgaag agcgtcttag cttaaaaacc atgttttcaa atgcggatga
     4381 aaatttaaag aaaaagaaaa aagagaaaaa gccttttgta gcgactaaga aagaaagtgc
     4441 tgaaaaaatg gactttttag aaggccatga ttttgctgat atttctttag aagatgaaga
     4501 tgtggtggtt ttacctgatt ttagtgtaaa agaacaagaa aaaccacaaa atactatgaa
     4561 aaaaccacct aactttttgc gtcaagcagt aggaaattca gcaaatcttg ggcttgaggg
     4621 tggaattcaa agaagaagtc gtaaaaaacc acctaaaaaa gttgagaaaa aagaaaatga
     4681 agcggtttcg agcgtagaaa tttcaaaaga aattcgtgtt tatgaatttg cagataagat
     4741 aggcaaaagc gtgagtgaag tgatttcaaa acttttcatg ctgggtatga tgacaactaa
     4801 aaatgatttt ttagatgaag atgcgattga aattttagct gctgaatttg gtatagagat
     4861 caatatcatc aacgaagcag atgagtttga ttatgtaaaa gactatgaag aagaagttga
     4921 tgagaaagat ttggtaagta gagcaccggt gattactatc atggggcatg ttgatcatgg
     4981 taaaacttct ttgcttgatt atatcagaaa atctcgtgtc gctagtggtg aagcaggggg
     5041 gatcactcaa catgtgggcg cttatatggt ggaaaaaaat gggcgtaaaa tcacttttat
     5101 agatactcca ggtcacgaag cttttactgc tatgcgtgca aggggtgcaa gtatcactga
     5161 tattgtaatc atcgttgtag cagcagatga tggggtaaaa ccacaaacta aagaagcgat
     5221 caatcacgct aaagcagcgg gtgtgcctat tattattgct attaataaaa tggataaaga
     5281 agcagcaaat cccgatatgg taaaaactca acttgccgaa atggaaatca tgccagtaga
     5341 atggggcgga tcttatgaat ttgtaggagt ttctgctaaa acaggaatgg ggattgaaga
     5401 tttacttgag atcgtgcttt tacaagctga tattttagaa cttaaagcca atccaaaaag
     5461 ttttgctaaa gcaagcatta tagaaagttc tgtgcaaaaa gggcgtggtg cggtagctac
     5521 tattatcgtg caaaatggaa cacttactgt aggaagtact gtggttgcag gcgaggctta
     5581 tggaaaagtg cgcgcaatga gcgatgatca aggcaaggct ttaaaagaga tcaaaccggg
     5641 tgaatgtggt gttatcgtag ggcttagtga agtggctgat gcgggtgaaa ttttaatcgc
     5701 agtaaagagt gataaagaag caagagagta tgctaacaag cgccacgaat acaaccgcca
     5761 aaaagaactt agcaaatcca ctaaagttag cattgatgag cttggagcta agatcaaaga
     5821 aggtaatcta aaagccttgc ctgttatttt aaaagctgat gtacaaggat ctttagaagc
     5881 cttaaaagca agcttagaaa agcttagaaa tgatgaaatt aaagtcaata tcatacacag
     5941 tggagtaggg gggatcacgc aaagcgatat agagcttgca agtgcaagtg aaaactccat
     6001 cgtactaggc tttaatatac gcccaaccgg agagatcaaa gagcgtgcta aagataaagg
     6061 cgtggaaata aaaacttata atgttattta taatctactt gatgatgtaa aagccttgct
     6121 aggtggtatg atgagcccta tcatctctga agaacaactt ggacaagcag agattagaca
     6181 agtgatcaat gtaccaaaaa tcggacaaat tgcaggttgt atggtaaccg aaggggtgat
     6241 taaccgtggg gctaaaattc gccttatccg tgatggagtt gtggtttatg agggaaatgt
     6301 aagctcactt aaacgcttta aagatgatgc taaagaagtg gcaaaaggct atgaatgtgg
     6361 cgtaggtata gaagggtgcg atgatatgag agtgggtgat tatatagaaa gctataaaga
     6421 agtagaggaa caagcaagtc tatgaaccca agtgagatta aaaaactacg cactgaaagt
     6481 atcttaaaag agctgatccc tgaagcttta gcaaatttag atgatgaaaa tttgaaaaat
     6541 ttgtgtgtag tggatgtaga gtgtaaaaaa ggcagatatg atgcttttgt gtatcttgat
     6601 aagatgtttt ttaatgttca tgagcaagaa aaaattttat cttctttaaa aaaggcaagt
     6661 agagctttgc aaaattactg catgagtgag cagggttggt ataggtgtcc gaattttcat
     6721 tttaaatttg atgataggct tgagtatcaa aaccatatgg atgcactttt tgaaaaaata
     6781 aaaaaggata aaaatgaatc ttgaagccct ttgcaaagaa gtgaatttag agctttatga
     6841 tagcgaatta actagcgaaa atggcaagaa aatttatcgc gtttatgtga tgaagccctt
     6901 agatgaaaag ggtgaaagaa ggggtgtgaa tttggatgat tgtgcaaggc ttagtgaaat
     6961 tttatcacct attttcgatg tggaaccacc tgtaagtggg gagtattttt tagaagtatc
     7021 ttcagcagga cttgagagaa aacttagcaa gatagagcat tttgcaaaaa gtatcaatga
     7081 gcttgtaaaa atcacaacag gtgaaaaaga aaaaatcgaa gcaaaaatca tcagcgtaga
     7141 ggatgaaaat atcactttag aaaatttaga aaatcaagaa aaaactactt taaaatttag
     7201 cgatattaaa aaagccagaa ccttcataca atggtaaaaa tttagatttt taaattttta
     7261 cctatctttt atataattaa aattaaacac aaaaattcaa aaggcataca atgctagaag
     7321 ataaatacga ttggaaaata agtaaggcag atcaaaatgg taatgtgtat tattattttc
     7381 caaaagatga ggatgaattt aaagaagcag ttgtgaaaaa tggtggtatg agtgtgtatg
     7441 tttatcaaga gggtagattg atagatgaat ttcatactaa aagtcaaggt tataggtgga
     7501 cttcacctgt ttttaattat ctcaaaacta tgaataaaaa tggaaaagat ttttatagat
     7561 attataaaaa ttgtaaattg tttgcgattg tggattgaaa ggaaagttta tgattgaatt
     7621 tttaaatgaa gatagaaaaa agtttaaaga gtatttaatt gatttttttc acaatgctta
     7681 taatagtgat aagttgtcct ctaaagatga aatagttaat tttgattttt taaaaaatta
     7741 tggtttttgc gttaaattaa gctatggaaa aggaactata tctaaaatcc catggatcat
     7801 atttataaga acagatactc aagaatataa agcttcttac ggtatttatg tatattgtgg
     7861 tataaaaaga gaaaatggag aaattattgt ttgcattgga gaaagtgaag acaagacaat
     7921 taattacttg gcaaaaaata aagttgatga ttataatacg caatttaata aaaaaactta
     7981 tgattataaa aatttaaata atgatattga tttgattatt gataagatta ttgaaaatat
     8041 gcaatggttt gcaaagttgc cattaaatga aattcaagat aggaatgatt tatctaaaag
     8101 taataataaa gaaataagaa atgatggaag cgaaatgtca aataaaaaag aaaacaaaaa
     8161 tctatcttta aatcaaattc tttatgggcc tccaggtaca ggaaaaactt accatactat
     8221 agataaagct ttggaaatct tgggcgaaaa tttagaaagt agagatagag atgagaaaaa
     8281 agctaagttt gatgagtatg taaaagatgg acaaatagtc tttacaactt ttcatcaaag
     8341 ctatggatat gaagaatttg tcgagggtat aaaacctatg atgaataatg aagcaaattc
     8401 acaagaaata caatatgaaa taaaagatgg aatttttaaa gatatatgta atagggcttt
     8461 ggaaaattat gaaaatagca atttaaatac agaagagttg agagaaaaga taaagctacg
     8521 ggaaaaagtt gaaaaatttt taaatcgact tttagaaaca aatgagccta ttagcaaaac
     8581 aaaaggtgga aattttttta tcaatagctt caataataat acaattgaaa tttatagtga
     8641 agatgtagaa aggtttgacg gtatttttaa attaagtttg tctacattta taacattatt
     8701 aaaatctaat attgaattta atagcgctgt tgaaatgttt aaaaaagtat ttgatagaga
     8761 ttatgctgat agaactcata cttattattt taatttggta aataaattta aagagtatga
     8821 aaaacaagca gtattaaaaa ccgaagataa taaaattagt agcaattctt taaattctta
     8881 cataatcatc attgatgaaa tcaatcgtgg taatgtaagt aagatttttg gtgagcttat
     8941 caccttaata gaacctagta aaaggatagg tgaaagcgag gaattaaaag ttactttgcc
     9001 ttatagcggt aaaaaatttg gagtacctaa aaatgtatat atcctaggca ctatgaatac
     9061 agctgataga agtatcactt ctcttgatac agccttaaga agaagatttg aatttgtaga
     9121 gatgatgcct gatcctgatt tgcttaagaa tgtttttatt tgcaaagatg tagaaaatcc
     9181 aaataaagat gaagattatt taggagatga tgctaaaaca gaaggttttg cagagatact
     9241 tcaaaatatt ttaataagta taaataaaag aattgagttt ttattggata gggaaaaaac
     9301 cataggacac gcatttttta tgagtgaagc tgttaaattt aataaagata attggtgtaa
     9361 accagataaa tatgaagaag attggtatgt tttaagtatc tcaaaattaa aaagtatttt
     9421 tcaaaataaa atcatcccgc ttttgcaaga gtatttttac aatgactatg ctttaattag
     9481 cgtagtttta aatgataatg gtatgattga aaaatgtgaa aaagatgata aatatctaca
     9541 aaaaataaaa aatttggaca atgtagatag cgagaagatt atttataata ttgcttcatt
     9601 tgataataaa atttggaacg atataaaaac ttatcaagct atttataatg atggggaaaa
     9661 tcaatcaaaa aatgataaac aataacacct tttccatcat cgaacaccaa gctttttcta
     9721 aagaagattt gcaaggaatt ttcaaagaaa aggctaaaaa attctatcaa gagctagaag
     9781 actttgctaa aaataatgaa aattttctag gctttaaaaa caaaaacacc ctaacagcta
     9841 aaaattatgt aggcattatc caaaccaaaa gtggagtttt agaaatttta ccaaaatgta
     9901 caaatttgga cggttataaa gataaagagt gcaaattatc tactatctcg aaagaaaaac
     9961 tactaaaaaa ttatatttta aatcaaataa gtcaagctaa aaccagtgag aatttttatg
    10021 gagaggattt tgctttcaat cccaaaaccc ttttaatcaa tatgctaaaa accttaaaaa
    10081 attctccttt taaaaaatcc caaatttcat ctttgcaaat ttctaaaatg cctttgctag
    10141 aggtatttat cgcaatgttt ttggatgaat tggacggggt ttataaaaag ggtttgaaaa
    10201 aggattatat aagcattgaa gaaaatagaa attttcttaa aggaaaattg caatttagcc
    10261 aacatttaaa acaaaattta gttcataaag aaagattttt cactcaaagt gatgaattta
    10321 tgctcgatat tgcgcccaat cgccttataa aatccactct caatctttta aaatccaaaa
    10381 ccactcacca taaatttaaa atcatcaaag ctttggaaat gtttgatgag gtgggatttt
    10441 ctacaaatta tgaaaaagat ttcacttata aaatttcaag acattttgat tattatgaaa
    10501 atctactttc ttggtgtaag atctttttgc aaaatcaaac ttttgcacct tataagggca
    10561 aaaatgaagc ttttgccttg ctttttccta tggaaaaact ttttgaagat tatgtagctc
    10621 atatgctaaa aaaagcaaat ccgactcaaa atatcaaaac tcaaagcagc ggaaaatacc
    10681 tgatctcaaa aaagggtgaa aaatgcttta tgttaaagcc tgatttgtat atagaaaatg
    10741 aaacgatttt agataccaag tggaaaattc cagatagcaa tgaagataaa aagcatggca
    10801 tagcgcaaag tgatttgtat caaatgtttg cttatgcttg taaatttaaa attcatgata
    10861 ttaaattgat ctatccttta tgtgaaagaa cgatgagttt gcaaaataca ataaaagaat
    10921 tagaattcaa tgcaaatgag catttggtat ttttaaatga taatagccct ttgaaaacaa
    10981 atataaaagt gcaagtgatt tttgcacctt taccttttta gtaaaaactt tgctagcaag
    11041 tgtatcaaaa agccaaagca agctacagct atgatacaag caccgcttga gagattaaaa
    11101 taatagctta ttataagccc taaaacgcaa aaaatcatac tcaatacact tgctaaaatc
    11161 attattaaac ctagtttttt tgtaaaattt tcagctataa agctaggtat gctaagtaaa
    11221 gccatgatca aaataatccc cacaaggcgt atagaaatca ctatgcaaaa tgccataagt
    11281 gcgattaaaa gataatgaaa aaagcttgta tttatccctc gcacttttgc aaattcgaca
    11341 tcaaagctta aagcttcaaa ttgtctataa aataaaagca ttaaaacaat caccacccca
    11401 tctactatcg ccatcagcca tagatcttgc attcctactg ctaaaatatt tccaaaaaga
    11461 taagccatca aatccgtgct ataacctgga cttaaatcta taagtatgat cccaaaagcc
    11521 atcccaaaag cccaaatcac agcgactatg ctatcgcttc tgtgctcata acgcttcgat
    11581 aaaaatgcta ccaaaaaggc taaaaagagc gtgaaaatac ctgtgctgat caatataggc
    11641 aaagaaaaat aaaacgctat accaataccc ccaaaagccc catgcgtgat gcctcctgct
    11701 atggaaaaga gtcgatttat catcacaagc gtacctacga ctccacaagc aatgctgact
    11761 aaaaccgcag ccaataaagc attttgaaaa aaggtgaaat ttaaaatttc aaacatggct
    11821 ttcctttgaa aatttcaaac aaaaattttc ttttttaaaa tttgattttt ttaaatttct
    11881 tcttgcaaat tcttgttcac aaattttttt cttctcacaa ttttcttcat cgcaaaagca
    11941 agaatttaaa ctcatttcta catcgcaaaa atgcgaatga ttttcataaa ggtgttttaa
    12001 aaatacgctt ttgtcttttt ctttggtatt ggtatgcaaa aagagttctt tgtttaaata
    12061 cgcgatttta tcactataag caagcacgag attgatatcg tggcaaatga gtaaaattcc
    12121 tatgcccttt tcatgcaaag aacttaggag ttcaaaaatt tgaatcgcgg atttgctatc
    12181 aacgcttgct gtaggctcat ctaagatcag cattttacat tcatcgacta aagctctagc
    12241 aataaaaacg cgttgttttt gacctccgct taattcattg atttttctat cccaaaaatc
    12301 ctgcatacct acacttgcta gagcttctaa ggctttgttt ttatcttttt tactataaaa
    12361 accaaaaatt tttttattga caagtcccat taaaacgatt tctataaccc ttgggcaaaa
    12421 gttagggttt gctaaagtgt gttgagggac atagccgatt tcattttttt taatcccatg
    12481 aaaactgata gtttttttag tctttaaaag ccctaggatg agttttacaa gcgtagattt
    12541 tcccgcacca ttagggccga tgatagaaag aaaatcttta ctatcatagc ttaagttgat
    12601 attttttaag attgtttcgt tattgtaagc gtaattaata tttgatattt caaaaaaaag
    12661 cattaaaaaa cctaactata aattttcata aaaagcattt gctgttttta aaagttcatt
    12721 ttcccaatca taagataaat aatctatctt gtaaattttt acattgtatt ctttttctaa
    12781 agtttttgct gttttttcag gaaaacgagt ctgtacaaaa ataactttaa tatttttttc
    12841 tttaatcaac gcacccaaat tttttatatc tttatttttt agtttttttc ctaaaaattc
    12901 tatatgattt tgcacaagat cataacgctt ggcaaaatat gaccaagcgg gatgatatgt
    12961 tataaattct ttatttttta ctttttgtaa ttttgaagag atctgtaaat ttaagacatc
    13021 taactctgtt aaaaatttat ctaaattatg cttgtataag cttttgtttt gaggatattt
    13081 ttgaactaga gcattgtagg tatttaaggc tatgttttga actaaaatgg gatcaagcca
    13141 agtaaaagga tctaaaattt ctttggagtt gctagaacta gttttagcta gaggaatatc
    13201 tttttgcatg tctatgattt taacttttgg aaatttttgt tctagtttat ctgttaattt
    13261 cttttcaaat tctaagccta tggtaaagta aagctcactt ttttcaagct ttttcatagg
    13321 gtttgatttg gattttggct tgtgtgtatt tgtggataag atgtttatat ttagagtatc
    13381 acctgctatt tttttaacaa aaaaagcttg tggggctatg cttacgctga ttaaaggtaa
    13441 atttagattt tcacttggtt gtaaggtttt agcgcaaaga aaggaattaa aaagtcctaa
    13501 aaatataaaa agaaggaata tttttttcat tattttatat cc
//
LOCUS       DBBXOW010000048        13391 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.049, whole genome shotgun sequence.
ACCESSION   DBBXOW010000048 DBBXOW010000000
VERSION     DBBXOW010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13391
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.049"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            78..1418
                     /gene="radA"
                     /locus_tag="ACJE1S_001310"
     CDS             78..1418
                     /gene="radA"
                     /locus_tag="ACJE1S_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HGG0806851.1"
                     /translation="MAKNKILFECQACGNQQSKWLGKCPECGSWDSFIELKSEQIKVL
                     KEIAQASTKASEAICIEDVELEHFSRCSTDDDELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKKNKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKNYEILIIDSIQTLYSNKIASAAGSITQVREITFELMRVSKTYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTSEVGIFEMTPKGLISAK
                     DLANRFFTRGKATSGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVRVNETAADLAVVAAIISSFKNRPLSKDCVFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIIPSKPLEDVGLKCFVAKELAQVLEWM"
     gene            1570..2250
                     /locus_tag="ACJE1S_001311"
     CDS             1570..2250
                     /locus_tag="ACJE1S_001311"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HGG0806852.1"
                     /translation="MKDLFLFSSLLDSSHTFSYFFHLGLVALIAVICASMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGDEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRTQGFIKYFAHFMGPIKFLAPLMFPIEVVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATIVEEGH"
     gene            2247..2447
                     /locus_tag="ACJE1S_001312"
     CDS             2247..2447
                     /locus_tag="ACJE1S_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806853.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKFHSFLYFFLGLLPGLLLS
                     LVFVCLIENYELKLKINQDKSK"
     gene            complement(2457..3305)
                     /gene="metF"
                     /locus_tag="ACJE1S_001313"
     CDS             complement(2457..3305)
                     /gene="metF"
                     /locus_tag="ACJE1S_001313"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HGG0806854.1"
                     /translation="MCSFSFEIFPPRRDENIKNLNAILDDLGQLSPNFISVTFGAGGS
                     INSKNTLETASLIQEEYKIPSIVHLPCIHSSKEKIISILQECKERQLDKILALRGDVC
                     NDLEKSKDFSYASDLISFIRKQGEIEIYAACYPEKHNESRNFIEDIHHLKNKVDAGTD
                     KLITQLFYDNEDFYTFKQNCALAGINIPIYAGIMPITNKRQVLKISQLCGAKIPPKFA
                     KILEKYENNTLALEDAGIAYAIDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKYLL
                     KEELHA"
     gene            complement(3315..5579)
                     /gene="metE"
                     /locus_tag="ACJE1S_001314"
     CDS             complement(3315..5579)
                     /gene="metE"
                     /locus_tag="ACJE1S_001314"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HGG0806855.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKAQSSKEELLETAKNLRAR
                     HWKDIQNAGIDFIPSNDFSLYDNVLDVAVLFNITPKRYKDLNLDPLDEYFAQSRGYQG
                     KNGDTIALAMKKWFNTNYHYLVPECDDASIIALSGDKIFKEYLEAKELGIETKPVLVG
                     IFTLFKLIAFKDENTKQLAKDKLLQAYIELLKKLNSLGVAWLELDEPYLVYDLNQEDI
                     ALFEEFYKELLKHKGEVKILLQSYFGDLRDIYTKLLESDFDALGLDFVEGKESLNLIQ
                     KHGFANDKILFAGIVNGKNIYANDYAKSLKLIKELQKYTQNIVINTSCSLLHVPYSTE
                     FETKLDSSYLKLFSFAKEKLKELQDLKAIINSNEENPLFKANQELFKNIPNRLDEKVK
                     ARLQTLKKEDFVRKPEFKERIQIQKEFLELPVLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSKKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALALRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKTKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLNLLDTLKAVNF
                     QTEVGPGVYDIHSPRVPSVEEISSTIEKILNKLPKEQIWINPDCGLKTRGYEEVVAAL
                     KNLVIATQKIREKL"
     gene            complement(5602..6372)
                     /locus_tag="ACJE1S_001315"
     CDS             complement(5602..6372)
                     /locus_tag="ACJE1S_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG0806856.1"
                     /translation="MTIFAKAFCIATLFTGFAWANEELKVGSSVVPHADILKFIKPTL
                     QKQGYDLKIYEFNDGVIPNIMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFQPKTGASISIPNNPTNESRALRIVASAGLIEIKDSELVTPLDIVKN
                     PKNLKFVELKDAQLTRSLDDVDYSLINSNFAILSGLNPIKDGLYTENKYSEYGNIIAV
                     KAGNEELDKIKALVKALQSDEVKNFIEEKYQGALIPTF"
     gene            complement(6386..7378)
                     /locus_tag="ACJE1S_001316"
     CDS             complement(6386..7378)
                     /locus_tag="ACJE1S_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family dioxygenase"
                     /protein_id="HGG0806857.1"
                     /translation="MNLPVLDLKIYEKDKSAFLKNLREITSNVGFFYLINHGIDKNLN
                     ENLFKLSKDFFNLPRSSKELISMVHSPQFRGYTSEGFEYTAGEKDYREQIDIGTERKA
                     LKWDLNSPLWQRLEGPNLWPDEIPELKEIFLAWHEQTRNACLKILQAFAEALDLPSDA
                     FGKLYGENSYEHCKIIHYPKISKDASQGVGPHKDGGLITFVFQEEQNGLEAFIDDQWI
                     SVPPLEGSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFP
                     LNPELVQESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVARIYHSDLIEKFSFA"
     gene            complement(7694..8188)
                     /gene="luxS"
                     /locus_tag="ACJE1S_001317"
     CDS             complement(7694..8188)
                     /gene="luxS"
                     /locus_tag="ACJE1S_001317"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HGG0806858.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKTMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSDLVEIIDISPMGCRTGFYMSLIGTPDEKSVAK
                     AWEASMKDILNVSDQSQIPELNIYQCGTCAMHSLDEAKEIAQKVLNSTIGIMNNEELK
                     LENI"
     gene            8303..9721
                     /gene="gatB"
                     /locus_tag="ACJE1S_001318"
     CDS             8303..9721
                     /gene="gatB"
                     /locus_tag="ACJE1S_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HGG0806859.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFININGENKRIGITRAHLEEDAGKNIHENNYSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKARFIDELGIKESDAEVLISSLEMSRFFESLIALNL
                     NPKLCVNWLNTELMGLLKGELTIENSPVDAIKLGTLIKRIEEGVISAKAAKDVLAHVF
                     ENPDMDIDETIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPNKVNEILKAKLG"
     gene            9721..10620
                     /locus_tag="ACJE1S_001319"
     CDS             9721..10620
                     /locus_tag="ACJE1S_001319"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HGG0806860.1"
                     /translation="MSKIAIIGAGKWGSALYSALSINNTCFMTSRTQRDLPYFVSLEQ
                     ALNCEYLVFALSSQGIYSWLKQNFVNKGQKILIASKGIDTSTCKFLDEIFSEFIDRDK
                     LCVLSGPSFAAEVMQNLPCALVVSGIKEELCKKFASFFPDFIKVYTDDDVRGAEICGA
                     YKNVLAIASGISDGLGLGNNARASLISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFL
                     TATSVLSRNYRVGLALAKEKKLDDILQELGEVAEGVKTAYAIAKISKDKAIYTPIVNE
                     IVQILQGKNVKQAVQNLLKTKDN"
     gene            10629..11810
                     /locus_tag="ACJE1S_001320"
     CDS             10629..11810
                     /locus_tag="ACJE1S_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HGG0806861.1"
                     /translation="MLIKNAKIYGENLQDLLIKDGKIVKIGANLDDNDEVLDAQGMTL
                     LPSFVDLCVNLKNDKFSLSNLELLEKECLRGGVGAIILRDCMDFDEESFSLFLQNLKT
                     RKIQIFPSICALDKQGKLKNLATLFNKGAHALELKSSSNANILRVGMQYALMKEKSIF
                     VKCHDENFDDNGVMNDCEMSFELGLAGMSAVAESSEVAKIQEIAKFYGVKVIFDLLSL
                     KRSIELLEDENLKLISIHHLIKDDSACAGFNTAAKLNPPLRSKEDKESLKQALKQGKI
                     DFLSSLHSAKSISLKDLAFDEAAFGIHSVCEFMSLCYTFLIKEDLLTWQNLCKATSQN
                     PSEFLGLNSGIIEVGKEANLVLFDQNEEISAPKSSLYANDKLFGKVKLHLVKGEKIIL
                     N"
     gene            complement(11813..13339)
                     /locus_tag="ACJE1S_001321"
     CDS             complement(11813..13339)
                     /locus_tag="ACJE1S_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HGG0806862.1"
                     /translation="MQKDNLIAFIIFTISVIAFIIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PEQFDPMLFVAIMLAALLSSGVWIFIATKKGLPVSTTHSIIGGIVGASIMMGLLKFDG
                     SQTLSMVKWSEIVRIAVSWVISPLLGGLVAYIIYSYIDKKILKPSEKLGEELKNLKKE
                     RKKFKENYFLNLKTKSMEEQIKELSAIALEDEGQENSFYKNQIKEFKEKEKNIDIYSV
                     LKTHMPIIACIGAAIIAAMFLFKGLNNVSTLDILQNFWIIGIVGTISYVVTFAIVKIV
                     KKTELNKTTDRLFAWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINANSPV
                     PFAALAMFGVALVIGLWFLGKEVITTVGSKLASIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAVLGIGVYNKNANWMMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGL
                     "
BASE COUNT         4284 a         2039 c         2331 g         4737 t
ORIGIN      
        1 ctttttgtta aattttaatt taatttttgt tataatgtga aaaattattg caataaatat
       61 tctttaaaga aagtatcatg gctaaaaata aaattctttt tgaatgccaa gcttgcggaa
      121 atcagcaaag caaatggctt ggaaaatgtc ctgagtgtgg ttcttgggat agttttatag
      181 aattaaaatc tgaacaaatt aaagttttaa aagaaatcgc acaagcaagt acaaaagcaa
      241 gcgaggctat ctgtatagaa gatgtggagc tcgagcattt ttcaaggtgt agcactgatg
      301 atgatgagct ggatttggtt ttaggtggag ggcttgttga gggttctttg gtgcttatag
      361 gtggtagccc tggggttggc aaatctacac ttttactaaa gattgcttct aatttggcta
      421 aaaaaaataa aaaagttctt tatgtaagtg gagaagaaag taaggcgcaa atcaaattaa
      481 gagccgatcg tcttgaggct aatactccta atttattttt acttacagag ctttgtcttg
      541 aaaatatttt agaagaattg cataagaaaa attatgaaat tcttatcatc gactccatac
      601 aaaccttata ttcaaataaa attgcttcag cggctggaag tatcactcaa gtgcgcgaga
      661 tcacttttga acttatgcga gtaagcaaaa cttacaatat cagcactttt ataataggac
      721 atatcaccaa agaaggagcc atagcaggcc ctagggtttt agagcatatg gtcgatgtgg
      781 tgctttattt tgaaggggat gcaactaaag aaatcaggct tttaaggggt tttaaaaatc
      841 gctttggtgg cacaagcgag gtgggaattt ttgaaatgac tcctaagggt ttaattagtg
      901 caaaagattt agccaatcgt ttttttacgc gaggtaaagc tacttcaggc agtgctttag
      961 gtgttgtaat ggagggttct cgtgctttgg ttttagaggt gcaagctcta gtgtgcgaga
     1021 gttcttatcc taaacgcagt gccacaggct atgaaaaaaa tcgtcttgat atgcttttgg
     1081 ctttacttga aagaaaatta gaaattcctc ttggtcatta tgatgttttt gtaaatatta
     1141 gcggtggagt aagggtaaat gaaactgcgg ctgatttggc tgtggttgcg gctattattt
     1201 ctagttttaa aaatcgccct ttgagtaagg attgtgtttt tataggggag ttgagtttaa
     1261 atggagaaat aagagaagtt tttagtcttg atacccgttt aaaagaagct aaaatgcaaa
     1321 aatttaaaaa tgctattatt ccatctaaac ctttagaaga tgtagggctt aaatgctttg
     1381 tagccaaaga gcttgcccaa gttttagaat ggatgtgata ttgctataaa gccttatatt
     1441 ttttgtttta acatcaacaa atttagagct atttttttat taaattagga gtaaatattt
     1501 tgttggtttt cattaaaata taagcaagat gataatataa ttagagttta aaaaaatagc
     1561 gaggaaatta tgaaagattt atttttattc agttctttac ttgactcaag tcatactttt
     1621 tcttattttt ttcatttagg tttggtagct ttgattgctg tcatttgtgc ttcaatggct
     1681 actcgttcta tgcaacttgt tccacgcggt atgcaaaatt taggtgaagc gtttttagag
     1741 ggtgttttgt caatgggacg cgacactatg ggagatgaaa aaggtgcgag aaaatatctt
     1801 cctcttgtag caaccttggg aattatagtt ttctttagta atatcatcgg tattatacca
     1861 ggctttcatg ctccaacagc aagtttaaat ttaacacttt ctttggctat tattgtattt
     1921 gtttattatc attttgaagg aattcgtact caaggtttta taaaatattt tgctcatttt
     1981 atgggtccta ttaaattcct tgctcctttg atgtttccta tcgaagtagt atctcacctt
     2041 tctcgcgttg tttctttatc ttttcgtctt tttggaaata tcaagggtga tgatttattc
     2101 ttaatggtaa ttttggctct tgtgccttat attgcaccgc ttcctgcata tgttctttta
     2161 acttttatgg catttttaca agcattcatt tttatgattt tgacttatgt ttatttagca
     2221 ggtgcaacga tagttgagga aggtcattga tttatatctt agaattcttc aaaggtgcgt
     2281 ccttagcttt aatgcttttt ggcgcacttt ttttcttttt taaatttcat tcttttttat
     2341 attttttctt aggacttctt ccgggtttgc ttttatcttt agtttttgtt tgtcttatag
     2401 aaaattatga attaaaactt aaaatcaatc aagataaaag caagtaagtt ttatttttaa
     2461 gcgtgaagtt cttcttttaa taaatatttt acggcttcat aaatttttat agctgctttg
     2521 gatttattca tggtataaag atgaattcca tccaccccgc tagtaatcaa atctacaatt
     2581 tgatctatgg cataagcaat tccagcatct tctaaggcta aagtattgtt ttcgtatttt
     2641 tctaaaattt tggcaaattt aggtggaatt ttagctccgc aaagctgtga aatttttaat
     2701 acttgtcttt tgtttgtaat aggcataatg cctgcataaa taggaatatt aatacccgct
     2761 aaagcacaat tttgcttaaa agtgtaaaaa tcttcattat cgtagaaaag ttgagtgatg
     2821 agtttgtctg tgcctgcatc aactttattt ttaagatggt gtatatcttc tataaaattt
     2881 cgagattcgt tgtgtttttc aggataacaa gccgcataaa tttcaatttc tccttgcttt
     2941 cggataaaag agatcaaatc acttgcataa gaaaaatctt tacttttttc caaatcatta
     3001 catacatccc ctcttaaagc aagaatttta tcaagttgtc tttctttgca ttcttgaagt
     3061 atgcttataa ttttttcctt actagaatga atgcaaggta ggtgcactat gctaggaatt
     3121 ttatattctt cttgaattaa gcttgctgtt tctagggtat tttttgaatt tatagagccg
     3181 ccagcaccaa aagttacgct gatgaagtta ggacttaatt gtcctaaatc atctaaaatt
     3241 gcattaagat tcttaatgtt ttcatctctt cttggtggaa aaatttcaaa agaaaagcta
     3301 cacataaaac ccccttataa tttctctctt attttttgtg tggcaataac taaattttta
     3361 agagcagcta caacttcttc ataacccctt gttttaagtc cgcagtctgg attgatccaa
     3421 atttgctctt taggcaattt gttaagaatt ttttctatgg ttgagcttat ttcttccacg
     3481 ctaggcaccc tagggctatg tatatcataa actcctggtc caacttcagt ttgaaagtta
     3541 acagctttta gggtatctaa aagattgaga tttgatcttg aagcttcaaa agatattaca
     3601 tctgcatcca ttgcatcaat ttcttttaag atatcgctaa attcgctata acacatatgg
     3661 gtatgaattt gtgttttggt ttttactccg ctatgtacaa gattgaaagc aggaatcgcc
     3721 caatctaaat attcactatg ccaatcgctt tttcttaaag gcagtttttc tcttagagcc
     3781 gcttcatcaa tttgtatgat tttaatgccc gcattttcaa gatctaaaac ttcatctctt
     3841 aaagctaaag ctatttgctc ggtgctttct tttaggctga tgtcttctct tgggaaagac
     3901 caattgagta tagtcacagg acctgttagc atacctttta cgattttttt actcaagctt
     3961 tgagcaaatt tagaccatgc tagagtgata ggttttgtgc gtgatacatc gccccaaatt
     4021 acaggtggtt ttacgcatct tgttccatag ctttgaaccc agccattttg agtaaataaa
     4081 aagcctttta aattttctcc aaaatattcc accatatcat ttctttcaaa ttccccatgc
     4141 actaaaacat caagtcctat ttcttcttga atttggatac attctttaat tttttgttga
     4201 ttgaattcag tatagttttg tgctgaaatt ttttcttgtt taaaagcaag acgattagag
     4261 cgtacatcag cactttgagg aaatgatcct atggttgtgg ttggtaaaac aggaagttct
     4321 aaaaattctt tttgaatttg gatacgctct ttaaattcag gctttcttac aaaatcttct
     4381 ttttttagag tttgaagtct agcttttact ttttcatcta aacgattagg aatattttta
     4441 aagagttctt gattggcttt aaaaagagga ttttcttcat tgctatttat gatagctttt
     4501 aagtcttgta attctttaag tttttctttt gcaaaagaga aaagtttaag ataacttgaa
     4561 tctaatttag tttcaaattc tgtgctataa ggaacgtgca agagtgaaca cgaggtattt
     4621 ataactatat tttgagtgta tttttgaagt tctttgataa gttttaagct ttttgcgtaa
     4681 tcattagcat agatattttt accatttact atacctgcaa aaagtatttt gtcgttagca
     4741 aaaccatgtt tttggattaa atttaaactt tctttgcctt ctacaaaatc aagccccaaa
     4801 gcatcaaaat cactttctag aagtttagta taaatatctc ttaaatctcc aaaatagctt
     4861 tgaagcaaga ttttaacttc tcccttgtgt tttaaaagtt ctttgtaaaa ttcttcaaat
     4921 aaagcaatat cttcttgatt taaatcataa actaaataag gttcatcaag ttctaaccat
     4981 gctaccccta atgaattaag ctttttaaga agttcaatgt atgcttgtaa aagcttgtct
     5041 ttagcgagtt gtttagtatt ttcatcttta aaggctatga gtttaaagag ggtaaaaatt
     5101 cccactaaaa caggttttgt ttctatgcca agctcttttg cttcaaggta ttctttaaaa
     5161 attttatctc cacttaaagc tataatactt gcatcatcac actcaggtac taaataatga
     5221 tagtttgtat taaaccattt tttcattgct agagctatgg tatctccatt ttttccttga
     5281 taaccacgac tttgtgcaaa atactcatct aaaggatcta aatttaaatc tttatagcgt
     5341 tttggagtga tattaaaaag cacagccaca tctagtacat tatcatacaa cgaaaaatca
     5401 ttgctaggaa tgaaatcaat ccccgcattt tggatatctt tccaatgtct agctcttaaa
     5461 tttttagcag tttctaaaag ctcttcttta gaactttgag ctttaaaata tttttcaata
     5521 gcaaatttta attccctatt tgcacctatt cttgggtaag aaatgattga atttttcatg
     5581 ttgttctcct ttgttgttaa attaaaaagt agggattaaa gcaccctgat atttttcttc
     5641 tataaaattt ttaacttcat cactttgtaa agctttgact aaggctttga ttttatcaag
     5701 ctcttcattt cctgctttaa cggcgatgat attgccatat tcgctatatt tattttctgt
     5761 ataaagtcca tcttttatag gatttaagcc cgataaaatt gcaaaattac tattgataag
     5821 agagtaatct acatcatcta aacttcttgt aagttgggca tcttttaatt ctacaaattt
     5881 aagattttta ggatttttta cgatatccaa aggcgtaaca agttcgctat ctttaatctc
     5941 gattaatccc gcacttgcta ctatgcgtaa agcacgactt tcatttgtag gattgttagg
     6001 tattgatata cttgcccctg ttttaggttg aaattcttta tgttttttag aatataccgc
     6061 cataggttcg atatgaatac tagcaacttt tacaagatga gtgccttgtc tttgattaaa
     6121 ttctttcaaa taaggttcat gctgaaaata atttgcatca agttcgccat tttccaccat
     6181 aatattagga atcaccccat cattaaattc gtaaattttt aaatcataac cttgcttttg
     6241 aagagtaggt ttgataaact ttaaaatgtc tgcatgtggg acaactgaag aacctacttt
     6301 aagttcttca ttagcccagg caaagcctgt aaaaagagtt gctatgcaaa aagcttttgc
     6361 aaatatagtc attattccct cctttttatg cgaaactgaa tttttctatt aaatcgctgt
     6421 gataaatgcg tgctacatca ggatgtgagc gtatcattct tttaaaatag ttgctagcaa
     6481 catttcttaa aagtggattt tttggatctg tatccacgcc cttgctttct tggacaagtt
     6541 caggatttaa tggaaaaata ggaatatctt tatcaagctg cactccaagg aaataagcta
     6601 tactaaagcg ttctttaggg cttaaattta ctcggtgtat ggtagctttt agataaccat
     6661 tagtggctaa ttctaaaaat tctcctatat taaccacaac actaccttca agtggaggaa
     6721 cactaatcca ttgatcgtct atgaaagcct caagtccgtt ttgctcttct tgaaaaacaa
     6781 aggtaataag tccaccatct ttgtgtggtc ctactccttg agaggcatct ttggagattt
     6841 ttggatagtg tatgatttta caatgttcat aagaattttc accatagagt ttgccaaagg
     6901 catcgctagg cagatcaaga gcttcggcaa atgcttgtaa aatttttaaa caagcgtttc
     6961 ttgtttgttc gtgccaagct aaaaatattt ctttaagttc aggaatttca tcaggccata
     7021 aatttggacc ttctaatctt tgccataggg gcgaatttaa atcccatttt aaagcttttc
     7081 tttctgtgcc tatgtcaatt tgttctctat aatctttttc tccagcagta tattcaaagc
     7141 cttcgcttgt ataacctcta aattgaggcg aatgcaccat ggaaataagt tctttagagc
     7201 ttctaggaag attgaaaaaa tctttactaa gtttaaataa attttcattt aaatttttat
     7261 cgataccgtg attgataaga taaaaaaaac ctacatttga agtaatttct cttagatttt
     7321 taagaaaggc acttttgtct ttttcataaa tctttaaatc aagtacaggt aaattcattt
     7381 tctctcctta aaattatatt taaggataag aagatatctt aatgtttaga ttttgtttcg
     7441 taagatttaa ctaaaaatta ggattttaag ttgtgttttg aaaaaaataa actttttgac
     7501 ttttctacac attatatctc cttatccacc ttttgggcct ttggaaacat aatgttaaag
     7561 ccaaaggacg cactagatat tacacatctg gcacatcagt ttcatttttt ctccttagaa
     7621 agttaaattc tgcacattgt ataaaaaaat atattaaaaa aagcttagtc attagaaatt
     7681 taaggactaa tttttagata ttttcaagtt ttaattcttc gttgttcatt atgcctatgg
     7741 tagaatttaa aactttttgt gcaatttctt ttgcttcatc caaagaatgc atagcgcaag
     7801 ttccacattg atagatattg agttcaggaa tttgactttg atcgctcaca tttaaaatat
     7861 ctttcattga ggcttcccaa gctttagcaa cacttttttc atcaggtgtg ccaattaaac
     7921 tcatataaaa acctgtgcga catcccatag gcgaaatgtc gatgatttca accaaatccg
     7981 aatttaaatg atctctcata aaacctgcaa ataagtgttc tagtgtatgc gtaccttttt
     8041 cactcatgat gtctttattg ggtatgcaaa aacgcaagtc aaatacgcta atatcatcgc
     8101 cttttggtgt cttcattgtt ttagctaaac gcacagcggg tgctggcatt ttggtatgat
     8161 ctactttaaa actatcaagt aatggcattt taactccttt gtatataaat tattttatag
     8221 attataacat ttaaaaataa tatttaaagc ctttctaaaa gaaaaaagga taaaataaag
     8281 cattaaaatt caaggaaaat caatgtttga agtagttata ggacttgaag tacatactca
     8341 actaaacacc aaaacaaaaa tattttgctc atgcgcaact tcttttggag aagctccaaa
     8401 tacaaatgtt tgtcccactt gtttggcttt accgggtgct ttacctgttt taaatgaaga
     8461 agcggtaaaa aaggccatcg cttttgggaa agcggtaaat gccactataa acaaaaaaag
     8521 tgtttttaat agaaaaaatt atttttatcc agatttgccc aaagcttatc aaatttcaca
     8581 atttgatatt cctatagtag aaaaaggtga gctttttatc aatataaatg gcgaaaataa
     8641 acgcataggt attacaagag cgcatttaga agaagatgcg ggtaaaaata tccacgaaaa
     8701 taattattct aaagtagatt taaaccgcgc aggaactcct ttgcttgaaa ttgtaagcga
     8761 acctgaactt agaagcagtg atgaagcagt ggcgtatctt aaaaaacttc attctatcat
     8821 acgtttttta gatatttctg atgcaaatat gcaagaggga agttttagat gtgatgctaa
     8881 tgtaagtata agaccaaagg gcgatactaa gctttacact agagtagaga ttaaaaatct
     8941 taattctttc cgttttatcc aaaaagctat agaatatgag gtaaaaagac aaagtgaggc
     9001 ttgggaagat ggaacttacg aacaagaagt agttcaagaa accagacttt ttgatacaac
     9061 aaatttagtt acaagaagta tgcgtggtaa agaagaagcg gcagaatatc gctattttcc
     9121 agatcctgat ttgttgcctg ttttattaaa agatgagttt ttggatatta aaatccctga
     9181 acttcctgat gagaagaaag cacgctttat agacgagctt ggtataaaag aaagtgatgc
     9241 tgaggtttta atcagttctt tagaaatgag tcgttttttt gaaagtttga ttgctttaaa
     9301 tttaaatcct aagctttgtg taaattggtt aaatactgaa cttatgggac ttttaaaagg
     9361 ggaattaacg atagaaaatt ccccagtaga tgcgatcaaa cttggtacct taatcaaacg
     9421 catagaagag ggtgtgatca gtgcaaaagc agcaaaggat gttttagctc atgtttttga
     9481 aaatccagat atggatattg atgaaacgat tgaaaagtta gggcttaagc aggttagcga
     9541 tgattcagct atcgaagcag taattgagca aattttaaat gccaatgctg ataaggttgc
     9601 agagtataaa agcgggaagg ataagctctt tggtttcttt gtagggcaga ctatgaaaga
     9661 aggtaaggga gcctttaatc ctaacaaagt caatgaaatt ttaaaagcaa agttgggctg
     9721 atgagcaaaa ttgcaatcat cggcgcagga aaatggggca gtgctttata cagtgcttta
     9781 agtattaata atacttgttt tatgacttct cgcacacagc gagatttgcc ttattttgtg
     9841 agtttagagc aggctttgaa ttgtgaatat ttggtttttg ctttaagctc tcaaggaatt
     9901 tattcttggc ttaaacaaaa ttttgttaac aagggtcaaa aaattcttat cgcttctaag
     9961 ggtatagata cttcaacttg taagttttta gatgaaattt ttagcgaatt tatagataga
    10021 gataagctat gtgttttaag cggtccttct tttgcagccg aagtaatgca aaatcttcct
    10081 tgtgctttag ttgtaagtgg gataaaagaa gaattatgta aaaaatttgc aagttttttt
    10141 ccagatttta ttaaagtata tacagatgat gatgtgcgcg gtgctgaaat ttgtggcgct
    10201 tataaaaatg ttttagccat tgctagcggt ataagcgatg gtttaggact tggaaataat
    10261 gcaagggctt ctttgatttc tagaggtctt attgaaatgc atcgttttgg taaatttttt
    10321 ggagctaagg aagaaacttt cttggggctt gggggcgcag gagatttatt tttaactgca
    10381 actagtgtac tgtcaagaaa ttatcgcgtg ggtttggctt tggcaaaaga aaaaaaactc
    10441 gatgatattt tacaggaatt aggtgaggtg gcagaggggg taaaaacagc ctatgctata
    10501 gcaaagattt caaaagataa agcaatttat acacctattg taaatgaaat agtacagatc
    10561 ttgcaaggaa aaaatgttaa acaagcagta caaaatttat taaaaacaaa ggataattag
    10621 gagtttcaat gctgattaaa aatgctaaaa tttatggtga aaatttacaa gatcttttaa
    10681 ttaaagatgg aaagatagta aaaataggcg caaatttaga cgataatgat gaagtattag
    10741 atgctcaagg aatgacttta ttgccatcct ttgtagattt atgtgtaaat ttaaaaaatg
    10801 ataaattctc cctaagcaat ttagaactct tagaaaaaga gtgcttaaga ggaggggttg
    10861 gtgctataat cttgcgtgat tgcatggatt ttgatgaaga aagcttttcg ctttttttgc
    10921 agaatttaaa aactagaaag attcaaattt ttccaagtat ttgtgcttta gacaaacaag
    10981 gcaagcttaa gaatttagct acgcttttta acaaaggtgc gcatgctcta gaacttaaga
    11041 gttcgagtaa tgcaaatatt ttgcgtgtag gtatgcaata tgctttaatg aaagaaaaaa
    11101 gtatttttgt aaaatgtcat gatgagaatt ttgatgataa tggcgtgatg aatgattgtg
    11161 aaatgagttt tgaattaggt cttgcaggca tgagcgcagt agctgaaagt agtgaagtag
    11221 caaagattca agaaatagct aaattttatg gtgttaaagt gatttttgat ctgctcagtc
    11281 ttaagcgttc tatagagctt ttagaggatg aaaatttaaa acttatcagc atacatcatt
    11341 taatcaaaga tgatagtgca tgtgctggat ttaatacagc agcaaaactc aatccacctt
    11401 taagaagcaa agaagataaa gaaagtttga aacaagcttt aaaacaagga aagatagact
    11461 tcttaagttc tttacatagc gcaaagtcta tttctttaaa agatctagct tttgatgagg
    11521 cggcttttgg cattcatagt gtatgtgaat ttatgagcct ttgttatact tttcttatca
    11581 aagaagatct tctaacttgg caaaatcttt gcaaagcaac aagccaaaat ccaagtgaat
    11641 ttttaggttt aaatagtgga attatagaag ttggtaagga agcaaatttg gttctttttg
    11701 atcaaaatga agaaatttct gctccaaaaa gctcacttta tgcaaatgac aaactttttg
    11761 gaaaggttaa attacatctt gtaaagggtg aaaaaataat tttaaattaa gcttaaagtc
    11821 ctaagcttaa tttaaatcct aggaatacaa gtgctgccat tatcccagcg gctggcaaag
    11881 taataatcca agctaaacct ataggtttca tcatcatcca atttgcattt ttattatata
    11941 cccctatacc caaaactgca ccgattaaaa tatgtgttga gcttactgga attccaaatt
    12001 gagttgctaa aagtatgact atacttgctc caagttctgc actaaatcct gtggtagggc
    12061 gtatagaagc tagcttagaa cccacagtgg taattacttc ttttcctaaa aaccaaagtc
    12121 ctataaccaa agcgactcca aacatagcta gagcagcaaa aggtacggga gaatttgcat
    12181 tgatagtacc gtttttaaga acatctaaaa tcgcagcaaa agggccaata gcattagcta
    12241 tatcattagc cccatgagag aaagcaaaac tagaagcggt aaaaatttga aaccaagcaa
    12301 aaagtctatc ggtcgttttg tttaattcgg tttttttaac aatctttact atggcaaagg
    12361 ttacaacata gcttatggtt cctacaattc ctataatcca aaaattttgc aaaatatcta
    12421 aagtgctaac attatttaaa cctttaaata aaaacatagc agcaattata gcagctccaa
    12481 tgcaagcgat aataggcata tgtgttttta aaacagaata aatatctata tttttttctt
    12541 tttctttaaa ttctttgatt tgatttttat agaagctatt ttcttgtcct tcatcctcta
    12601 aggctatggc tgagagttct ttgatttgct cttccatact tttggtttta agatttaaaa
    12661 aataattttc tttaaatttc tttctttctt tttttaaatt ttttaattct tcgccaagtt
    12721 tctctgaggg tttgagtatt tttttatcta tataagagta gatgatataa gctacaagtc
    12781 ctcctaaaag aggtgaaatc acccaagata cagcaatcct tactatttcg ctccatttaa
    12841 ccatggataa ggtttgtgat ccatcaaatt ttaaaagccc catcatgata ctagctccaa
    12901 ctataccacc aatgatacta tgtgtagtag atacaggcaa gccttttttt gtggcgataa
    12961 aaatccaaac acccgagctt aaaagagcgg ctagcatgat agcaacaaaa agcataggat
    13021 caaattgttc aggaaatata actattccac tgcgtatagt tttggttact tcagcccctg
    13081 caaaaatagc accgctgagt tcaaaaacag ctgctatgat caaagcttgt tttatggtta
    13141 cggttttagc tcccacacta gtaccaaaag aatttgctac atcatttccg cctatgttaa
    13201 atgccataaa tatgccaaaa atggaagcga gtataaagag tatgagttgg tgctgggaga
    13261 tatagccaaa tccccaaatg ataaatgcga ttacgctaat ggtaaagatg ataaatgcga
    13321 taagattatc tttttgcata aagttaagcc ttttttaact ttaattatac ccttataatc
    13381 ctgaatttgc a
//
LOCUS       DBBXOW010000049        13239 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.050, whole genome shotgun sequence.
ACCESSION   DBBXOW010000049 DBBXOW010000000
VERSION     DBBXOW010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13239
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.050"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1630)
                     /locus_tag="ACJE1S_001322"
     CDS             complement(<1..1630)
                     /locus_tag="ACJE1S_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactosyltransferase-related protein"
                     /protein_id="HGG0806863.1"
                     /translation="MPLLSVIIPFGLSKERSYIQERVYEKAQCFKTDEKIEFIFVEGY
                     SSQEHNLKTCILKNNHIYLKDESQKEYFSQGKCRNFGASYANASVLLFLDLDCFISFD
                     SLEKILKLIKIKNILNNPSALLVLPVVYLTQEASEILREYPMDLWDVLIQEDLISGKN
                     FLVKFFAPSSTSGLIINRHKFLEIGGNDENFIGHGYEDFDLFARVLNSCLKFEKIPLN
                     LNYDSRNWNFYSFKGFRSWFSLLGYELCFYGIYMYHLWHIEPNQNGYMDKKHKNHKLF
                     YKHLKKIKDYSIDPLQISSVKNTKILVIANKKYNFRALSVYLGKFVYKSLDELAYQSK
                     KEIEIYLQEEKFDKILLDKNIYNEDLHKIFKNYLCVYFESGILPDSWLFYKDANGLYD
                     RKHWDIDLDKLQIKEMQAYIISLKFEEKKKILTFIQKLGFDKDDDLYKIVFYLKNELY
                     SFAKNDDFYQIIFNKKKMLMLGNYDKEYYSLKSFVYKPYLYEIKRVRFFSKILEFLGL
                     NFLLSLISQTKFYRLARKLFFNPRDFFKDSKFYKR"
     gene            complement(1636..2583)
                     /locus_tag="ACJE1S_001323"
     CDS             complement(1636..2583)
                     /locus_tag="ACJE1S_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HGG0806864.1"
                     /translation="MDTLKIAKEVFATEAKAIEDLALNLDENFSKVIELMLHTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIAMCGKENSTLVKQGDIFLNISVKEEACPLQLAPMSSTTATLV
                     MGDALAAALMKARNFRPDDFALFHPGGSLGRKLLTRVSDLMVSKNLPIVHPDTEFNDL
                     VDVMTSGKLGLCLVLENEKLVGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDA
                     DAMASEAEEIMLKYKIKEIVVSKEDKVVGIIQLYAIGNV"
     gene            complement(2610..4241)
                     /locus_tag="ACJE1S_001324"
     CDS             complement(2610..4241)
                     /locus_tag="ACJE1S_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HGG0806865.1"
                     /translation="MKKILILFLSCIFCFGAIDVSQISSSGNSSTTSFVQGLENNISK
                     SAPTQIPVFGAELFNGNFKNYTQRVYNPDYKIAVGDQISLKIWGAVEFEQILVVDSQG
                     NIFIPKVGAVNLLGVKNSALVSVIKAQVNKIYKNNVFVYADMNAYQNVSVFVTGSVNA
                     PGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNAVIKKIDLYDFLLKGQMDLF
                     PFRSGDVVLVGNVQSYVFVNGDVQRPFRFELANDIKTLFDLARVAGAKPIVTNAILRS
                     YGNDHKLEVSAYNKMQFSKVLLKTGDEVQFNPEYISQNISITVNGEHSGLKTLVVRKG
                     TTLEDVSRLIVANGQSDMNALQVFRKSVAKTQKDLINAQLKELETLALTSPSVTSQGA
                     AIKAEQAKLILEFIQRAKELEPKGQIVIDKPKSYGEVILEEGDTINVPSKNNLIIVQG
                     EVTLPGAFVYNKGEDLKYYINLAGGYGERADTSKVLVIRNNGKAQRYSGSVDMMPGDS
                     VLVLPKVESENLQIFSMLTQILYQIAVATNVVLNL"
     gene            complement(4243..5358)
                     /locus_tag="ACJE1S_001325"
     CDS             complement(4243..5358)
                     /locus_tag="ACJE1S_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HGG0806866.1"
                     /translation="MTKINTFFNKIKDLSIFDSFKIVWILMIFVIIYYILIAADRYVS
                     TITMSVKSTTGSTQASGVLSLLTATSNTSEDIKFLQGYIESLDMLKILDEKIHLKQLY
                     DEQYIDLFYSLSSSSSIESYLKYYQSRVKVHVDDKTGLLNVEVEGFTPESAHLIAKTI
                     MQESEKFINEISHKAAREQMSFAEEELVKYKERYQKAQNDLIAFQNKYGVFDPLKQAE
                     AKAGLVTQLESDIAQREAKLLTMQSYMNDHAPEIVTLKAEITALKKQLVKERSKISAD
                     NSSQKLNDLAAKFQDLTIEAGFAQSAYEAALKAYESARIEALRKIKQLVIVQTPDVPQ
                     SAKYPEKIYNILTAFIVLSLIFGVIKFVKMIIEEHKY"
     gene            complement(5358..6020)
                     /locus_tag="ACJE1S_001326"
     CDS             complement(5358..6020)
                     /locus_tag="ACJE1S_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002797192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806867.1"
                     /translation="MIKVLNLTKSYPLFNGGRHYVFKDFTFEFPENCSIGLMGRNGAG
                     KSTLMKLLSGSELPDRGKIITNKKFSWPLGLSGAFQGSLTARDNAKFVARVYGYKGKE
                     LYEKVKFVEDFAELGKFFDEPMNTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPK
                     FREKSHKLYKERLSQSKVIMVSHNVAEIKEWCDKIIFMENGKATVYDDVDEGIAVYQG
                     KK"
     gene            complement(6017..6799)
                     /locus_tag="ACJE1S_001327"
     CDS             complement(6017..6799)
                     /locus_tag="ACJE1S_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806868.1"
                     /translation="MLNVIHALFFRELKTRFGKNKYLGYFWVIGEPMSVILILTTIVT
                     ILREYHHQLMPEGISIFMFLISGIVPYFMFRSIVTQLMNGIGANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFVAVLFIVGWFFRLEVIPRHFLSVMICIFLLMCSGFALGMVFA
                     IIGYFLEPLKTLLNYFSIVFYWGSGVIFPTWLMPKPILDILYYNPLLHVMELLRFNFF
                     ENYPLQDDYTYTYPIFCIICTSFVGLFLYYYNRQALTAVRRT"
     gene            complement(6858..7274)
                     /locus_tag="ACJE1S_001328"
     CDS             complement(6858..7274)
                     /locus_tag="ACJE1S_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806869.1"
                     /translation="MDERILEFIKNEQLLSWAMSDEKGVYIANAFYVFDEKNLAFIIA
                     SHEDTKHIKLASKNPSIALNIAKESKIAFLKGIQAKAKFKSASKEQIKIYFSKFPFAK
                     LDKSAKIYALELDWLKFTNNALGFGKKLEFYKDKIL"
     gene            7351..7914
                     /gene="ciaI"
                     /locus_tag="ACJE1S_001329"
     CDS             7351..7914
                     /gene="ciaI"
                     /locus_tag="ACJE1S_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HGG0806870.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSLSYSNDEEGKSL
                     NLKRQYGFSFTFEGSKLTQADLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQSNDKDINTSMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQNNAEKGLNLYA"
     gene            7954..8643
                     /locus_tag="ACJE1S_001330"
     CDS             7954..8643
                     /locus_tag="ACJE1S_001330"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HGG0806871.1"
                     /translation="MKNVEILENMLKLQQKLNDETNGLNWEEGYTKERKLISWRRCIY
                     MECAELIDSFAWKHWKNISSPTNWENVRMEIVDIWHFILSLLLEEYTNKKDKNFQAIA
                     NEIISVSVFQDFCKEEGNPSENDLYSILNDIELIIHKCSGFGFSLGELLSNYFILAIK
                     CGLNLEILYKTYIGKNILNIFRQNNGYKQGTYKKDWNGKEDNEVLAEILEQELDFDTI
                     YKKLEEYYKKV"
     gene            8645..9355
                     /locus_tag="ACJE1S_001331"
     CDS             8645..9355
                     /locus_tag="ACJE1S_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HGG0806872.1"
                     /translation="MKILRLAIKDFFTLQFLKFALIPLTFSFILMIFLAIFGFSFLLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITLISVLFSGFVIIFASVFLALFITSFLTPLI
                     VKQINNKYYHHEVQNISNMYIIFEIFKIFLKFIGIFLLCTLALFLPFINLFVYYLAFY
                     YLFHKLLMLDITSSVLDKENFKIFNAQASTFEFKFSTLCFYLLSSIPLLGIFLQVFFV
                     IFLTHLAYQRILKLEVKG"
     gene            complement(9338..10303)
                     /gene="tilS"
                     /locus_tag="ACJE1S_001332"
     CDS             complement(9338..10303)
                     /gene="tilS"
                     /locus_tag="ACJE1S_001332"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HGG0806873.1"
                     /translation="MQIKDEILSLLKKGRNLLAFSYGSDSSALFHFLVQKKIDFDLVM
                     INYKTRKNSDLEEQKAKELALEFHKKIFIKSAPVIKGNFEKEARDFRYDFFEKICLEQ
                     NYSNLILAHHLNDQLEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFMSKDEIL
                     SYLKENDIFYFQDESNENEKYFRNYIRKNFSNAFVSKFHQGLKRSFFYLDEDRKKLYD
                     LESIKEIQGLMICPKNESLIAKAVKMKGLLLSAAQRKEFLKGDCVLGGKIGIVYKDEK
                     AIVFKYETCQKLPKEFKEACRIAKIPRLLRAYLYNHKIDISSLNF"
     gene            complement(10293..11612)
                     /gene="rimO"
                     /locus_tag="ACJE1S_001333"
     CDS             complement(10293..11612)
                     /gene="rimO"
                     /locus_tag="ACJE1S_001333"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HGG0806874.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQGENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIEGI
                     KAARILYLYPTSASEALIKRIIASKIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPDSFLRTGFIVGHPGESDADFEEFCEFIKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGKKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEIIQNVDKKLIAKALRKIDAN"
     gene            11686..12783
                     /gene="prfB"
                     /locus_tag="ACJE1S_001334"
     CDS             11686..12783
                     /gene="prfB"
                     /locus_tag="ACJE1S_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HGG0806875.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWNDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKSE"
     gene            complement(12867..13139)
                     /locus_tag="ACJE1S_001335"
     CDS             complement(12867..13139)
                     /locus_tag="ACJE1S_001335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806876.1"
                     /translation="MEKGFELIKAKNNNANMDFYSPETLKNFDEKRYKYLKSKDFRLY
                     GSVKGYQYMIFSVNKDKSDKREFWALICEDSKVENCKIENATGRGV"
BASE COUNT         4595 a         2405 c         1760 g         4479 t
ORIGIN      
        1 gtcttttata aaatttagaa tctttaaaaa aatccctagg attaaaaaat aattttcttg
       61 ctaaacgata aaatttagtc tgtgaaatca aacttaataa gaaatttaaa cccagaaatt
      121 ctaaaatttt ggaaaaaaat ctcacccttt ttatctcata caaataaggc ttataaacaa
      181 aagattttaa agaataatac tctttgtcat aatttcccaa cataagcatt tttttcttat
      241 taaaaataat ttgataaaaa tcatcatttt tggcaaaact ataaagttca ttttttaaat
      301 aaaaaacaat tttatacaaa tcatcatctt tatcaaatcc taatttctgg ataaaagtaa
      361 gaattttctt cttttcttca aatttcaaag aaatgatata agcttgcatt tctttaattt
      421 gtaatttatc taaatcaata tcccaatgct ttctatcata aagcccattg gcatctttat
      481 aaaacaacca agaatcaggc aaaattccag actcaaaata cacacaaaga tagtttttaa
      541 aaattttgtg caaatcttcg ttgtatatat ttttatctag taaaatttta tcgaattttt
      601 cttcttgtaa ataaatttca atttcttttt tactttgata agcaagctca tctaagcttt
      661 tataaacaaa cttgcccaaa taaacgctca aagctctaaa attatatttt ttatttgcaa
      721 taactaaaat tttagtattt tttacacttg aaatttgcaa aggatctata gaataatctt
      781 ttattttttt caagtgtttg taaaataact tatgattttt atgcttttta tccatataac
      841 cattttgatt tggctctata tgccaaagat ggtacatata aattccataa aaacataact
      901 cataaccaag caaagaaaac caagaacgaa aacctttaaa gctataaaaa ttccaatttc
      961 tagaatcata atttaaattt aaaggaatct tctcaaattt taaacaagag tttaaaactc
     1021 tagcaaaaag atcaaaatct tcatagccat gacctataaa attttcatca tttccgccaa
     1081 tttctaaaaa tttatgtcga ttgataatca aacccgaagt cgaactcgga gcaaaaaact
     1141 taacaagaaa attttttcca ctgattaaat cttcttgaat caatacatcc cataaatcca
     1201 ttggatattc tcttaaaatt tcgctagcct cttgcgttaa atatactaca ggcaatacta
     1261 aaagagcact ggggttgttt aaaatatttt tgatttttat aagttttaaa attttttcaa
     1321 gactatcaaa agaaataaaa caatcaagat ctaaaaacaa aagtacgcta gcattggcat
     1381 aactagcacc aaaatttcga catttgcctt gagaaaaata ctctttttga ctctcatctt
     1441 tgagataaat gtgattgttt tttagaatac atgtcttaag attatgctct tgcgaagaat
     1501 aaccctcgac aaatataaat tctatctttt catcagtttt aaaacactgt gccttttcat
     1561 aaactctttc ctgtatataa gagcgttctt tactcaaacc aaaaggtatt atcacagata
     1621 ataagggcat aaatattata cattccctat cgcataaagc tgtatgatgc ctaccacttt
     1681 atcttctttg gaaacgacaa tttctttgat cttatacttt agcatgatct cttctgcttc
     1741 acttgccata gcatcagcat cgaccacttt aggatttata ctcatgatct ctttggcttt
     1801 aaaatcaaat cttggtttat cattagcctt taaagcgcgg cgcaaatccc catcggttat
     1861 aatgcctact aacttttcat tttcaagcac caaacaaagt cctaatttcc cacttgtcat
     1921 cacatcaaca agatcattaa attcagtatc tggatgaact ataggaagat ttttagatac
     1981 cattagatca cttaccctag ttaaaagctt tctacccaaa cttccacctg gatgaaataa
     2041 agcaaaatca tcaggtctaa aatttctagc cttcatcaaa gcagctgcta aagcatcgcc
     2101 cattaccaaa gtagcagttg tcgaagacat cggagcaagt tgcaaagggc atgcttcttc
     2161 ttttacagat atatttaaaa aaatatcccc ttgttttaca agggtagaat tttcctttcc
     2221 gcacatagct ataagaggga ttttgcgttt tttaatcgca gggatgattt ttaaaatttc
     2281 ttcagtttca cctgaatttg aaatagctat caaaacatca tcaggcgtaa gcatcccaag
     2341 atctccatgt aaagcctctc caggatggat aaaaaagctt ggagttcctg tgcttgctaa
     2401 agtcgcagct atcttagctc ctatatggcc cgattttccc atgccactga ctatacaacg
     2461 cccctttgta tgaagcataa gttctatgac tttagaaaaa ttttcatcca aatttaaagc
     2521 caaatcctct atagccttag cctctgtcgc aaaaacttct ttagctatct ttaaagtatc
     2581 aattttcatt ttatattacc ctaaaatcat cataaattca atactacatt cgttgcaacg
     2641 gcaatttgat ataaaatttg cgttagcata gaaaaaattt gtaaattctc actctcaacc
     2701 ttaggcaaaa ccaagacaga atcgcccggc atcatatcaa cacttccact atatctttga
     2761 gccttgccat tgttgcgtat aacaagtact ttagaagtat ccgctctttc tccataacct
     2821 cctgcaagat tgatatagta ttttaaatct tcacccttat tataaacaaa agctcctggt
     2881 aaagtaacct caccttggac tatgataaga ttgtttttac tagggacatt gatagtatca
     2941 ccctcttcta atataacctc tccataagat tttggtttat cgataacaat ttgcccctta
     3001 ggctctaatt cttttgctct ttggataaac tcaagtatca attttgcttg ttctgctttg
     3061 atagccgcac cctgagaagt caccgaagga ctagttaaag caagggtttc aagctcttta
     3121 agctgagcat tgataagatc tttttgagtt ttagcaacac tttttctaaa aacttgcaag
     3181 gcattcatgt ccgattgccc atttgctaca atcagtcttg aaacatcctc cagcgtcgtt
     3241 ccttttcgaa ctaccaaagt tttaagcccg ctatgctcgc cattgactgt tatactgata
     3301 ttttgcgaaa tgtattcggg attaaactgc acctcatcac ccgtttttaa taaaacttta
     3361 gaaaattgca ttttattata agcacttact tcaagcttat gatcatttcc ataacttctt
     3421 agtatcgcat tagttactat aggtttggcg cctgctacgc gggctaaatc aaataaagtt
     3481 ttaatatcat ttgcaagctc aaagcgaaac ggtctttgca catctccatt tacaaaaaca
     3541 taactttgga cattgcccac caaaaccaca tcgccacttc taaaaggaaa aagatccatt
     3601 tgacccttaa gtaaaaaatc atacaaatct atctttttaa tcacagcatt attgcgtaaa
     3661 atttgaatat ctctaaaact tccgtattct aaatttatcc cgcctgcctt atcaagatac
     3721 tggatcacag aatccgagct aagaccttga taaagccctg gagcattaac actgcctgtg
     3781 acaaaaacgc taacattttg ataagcattc atatccgcat aaacaaaaac attattttta
     3841 taaattttat ttacctgagc tttaatcaca cttacaagag cactattttt tacccctagc
     3901 aaatttaccg ctcctacctt agggataaaa atatttcctt gagaatccac aactaaaatt
     3961 tgttcaaatt caaccgcacc ccaaatttta agactgattt gatctcctac tgcgatttta
     4021 tagtcaggat tataaaccct ttgagtgtaa tttttgaaat ttccattaaa taattccgcg
     4081 ccaaatacag gaatttgagt aggggcactc ttactgatat tgttttctaa tccttgaaca
     4141 aagctggttg tgctagaatt tccacttgag ctaatctgtg aaacatctat agctccaaaa
     4201 caaaaaatac aacttaaaaa taaaattaat atttttttca ttttaatact tgtgctcctc
     4261 tataatcatt ttaacaaatt taatcacccc aaaaatcaaa gataatacaa taaatgctgt
     4321 taagatatta taaatttttt cagggtattt tgcactttgg ggtacatcag gggtttgaac
     4381 gataactagt tgtttaatct ttcttaaagc ttctatcctt gcactttcat aagctttcaa
     4441 agccgcctca taagcacttt gagcaaagcc tgcttctatg gttagatctt gaaatttagc
     4501 agctagatca ttgagttttt gagaagaatt atcggctgaa attttagatc tttctttgac
     4561 taattgtttt tttaaagcag tgatttcagc ctttagggtt acaatttcag gtgcgtgatc
     4621 attcatatag ctttgcatgg ttaaaagctt agcttctctt tgagcgatat ctgattcaag
     4681 ttgagttact aagccagctt tagcttctgc ttgttttaga ggatcaaaaa ctccgtattt
     4741 attttgaaag gcaatcaaat cgttttgcgc tttttgatag cgttctttat attttaccaa
     4801 ttcttcttcc gcaaagctca tttgttctct tgctgccttg tgtgaaattt cattgataaa
     4861 tttttcactt tcttgcataa tggttttggc gattaaatgc gcagattctg gagtaaatcc
     4921 ttcaacctcg acatttaaaa gtcctgtttt atcatccaca tgtactttaa cgcggctttg
     4981 ataatatttt aaataacttt ctatagagct agaacttgat aagctataaa ataaatcaat
     5041 atattgctca tcataaagct gttttagatg aattttttca tctagaatct ttaacatatc
     5101 aagcgattct atatagcctt gtaaaaactt gatatcttcg ctagtattgg aagttgcggt
     5161 taaaagcgac aaaaccccgc ttgcttgagt gcttccagta gttgatttta cactcatggt
     5221 gatagtactt acataacgat cagcggcaat taaaatataa taaatgatca caaaaatcat
     5281 caagatccat actatcttga aagaatcaaa aatacttaga tctttaattt tattaaaaaa
     5341 tgtatttatt tttgtcatta tttttttcct tgatagacgg ctatgccctc atctacatca
     5401 tcataaacag tagcttttcc attttccata aagataattt tatcacacca ttctttaatt
     5461 tcagccacat tgtgtgaaac catgattact ttagattgac ttaatctttc cttatataat
     5521 ttatggcttt tttctctaaa tttaggatct cctacagctc ctgcctcatc gattagataa
     5581 taatcaaaat caaaagccat gctaagccca aaagctatcc tagcactcat acccgaagaa
     5641 taagtattca taggctcatc aaaaaattta ccaagctctg caaaatcttc tacaaattta
     5701 actttttcgt aaagctcttt tcctttatag ccatatactc tagccacaaa tttagcattg
     5761 tctctagctg ttaaagatcc ttgaaaagca ccgcttaagc ctaaaggcca agaaaatttc
     5821 ttattggtaa tgatttttcc tctatcggga agctcagagc cacttaaaag cttcattaaa
     5881 gttgattttc ctgcaccatt tctacccatt aaacctatac tacaattttc aggaaattca
     5941 aaagtaaaat ctttaaaaac ataatgcctt ccgccattaa ataaaggata agatttggtt
     6001 aaatttaaaa cttttatcat gttcttctca ctgctgttaa agcttgtcta ttgtaataat
     6061 ataaaaaaag tcccacaaaa gaagtgcata tgatacaaaa tataggataa gtataagtat
     6121 aatcatcttg caaaggataa ttttcaaaaa aattaaatct taaaagctcc ataacatgaa
     6181 gcaaaggatt ataatataat atatcaagaa taggttttgg cataagccaa gtaggaaaga
     6241 taacacccga accccaataa aatactatac taaaataatt aagcaaagtc tttaagggct
     6301 ctaaaaaata tccaatgata gcaaaaacca tacccaaagc aaaacccgaa cacataagca
     6361 aaaatataca aatcatcacg cttaaaaaat gcctagggat aacttctaat ctaaaaaacc
     6421 aacccactat aaacaatact gctacaaata taacaaaata aatacaaaac tcaagcaaag
     6481 tcctagcgat aaaaacatgt atgggtttta caggtttgta agcaaaaaga gctaaatttg
     6541 ctcctatgcc attcataagc tgagtgacta tacttctaaa cataaaataa ggaactatac
     6601 ccgaaattaa aaacataaaa atagaaatcc cttcaggcat tagttgatga tggtattctc
     6661 tgagaatagt cacaatagta gtaagtatta aaatgacact cataggctcg ccaataaccc
     6721 aaaaataacc caaatattta tttttaccaa atctagtctt taattctcta aaaaacaaag
     6781 cgtgaattac atttaacatt tatttatata cctaattttt gcataagcta taatcataac
     6841 tcattttttt aaacaaatca taaaatttta tctttataaa attcaagctt tttgccaaat
     6901 cctaaagcat tgtttgtaaa tttaagccaa tcaagctcta aagcataaat ttttgcactc
     6961 ttatccaatt ttgcaaaagg aaattttgaa aaataaattt ttatttgctc cttgcttgcg
     7021 cttttaaatt tggccttagc ttggatgcct tttaaaaaag ctatcttgct ttctttggct
     7081 atatttagcg ctatgctagg atttttacta gctaatttta tatgctttgt atcttcatgt
     7141 gaagcgatga taaaagctaa atttttttca tcaaagacat aaaaggcatt ggctatataa
     7201 acaccttttt catcactcat agcccaagat aaaagctgct cattttttat aaattctaaa
     7261 attctttcat ccattgggta aaattatact aaattttttt aaaaaataac cgatttttca
     7321 ttttaagtat atcaacacaa ggggagtaaa atgcaaattg atgcgagcaa aaatcaaagt
     7381 ttttcaatgg actatacaac aaaaagtggc aaacacctag ccttgtctat gtatgataat
     7441 caaagcttaa gttatagcaa tgatgaagaa ggtaaaagtc ttaatcttaa acgccaatat
     7501 ggttttagct tcacttttga aggctctaaa ctcacccaag ctgatcttga tgagataaaa
     7561 aatgcaatga aagaagtcga acccatgata aaagactttt tggcaaattc taaagtagga
     7621 gaattaaaac caaaagaaat catagaatca gcaatgcaaa tggcaaatgt attgccaacg
     7681 ccaaatgatg aaaaccatca aaatgctatc atgaataatt ttacaaataa acttagtgat
     7741 ttactcaaac aaaatcaaag caatgataaa gatatcaata catccatgct cgaagatagc
     7801 aaaaaactac tagatgaagt gttagagcaa atgaaaaagc agcttgaaaa acagcaagaa
     7861 aaagctaaag aaaatcaaaa taatgcagaa aaaggtttaa atctttacgc ttaaatttta
     7921 taataaatca taaaaaatta aaaaaggcac aagatgaaaa atgttgaaat tttagaaaat
     7981 atgctcaagc tccaacaaaa actcaatgat gaaactaatg gtttaaattg ggaagaaggt
     8041 tataccaagg aaagaaagct catcagctgg agacgttgta tttatatgga atgtgccgaa
     8101 cttatagatt cttttgcttg gaaacattgg aaaaatattt caagccctac taattgggaa
     8161 aatgttcgta tggaaatcgt agatatttgg cattttatcc tcagtctttt acttgaagaa
     8221 tatacaaata aaaaggataa aaatttccaa gccatagcga atgaaatcat ctcagttagt
     8281 gtttttcaag atttttgcaa agaagagggc aatcctagcg aaaatgatct ttatagcatt
     8341 ttaaatgaca tagaacttat cattcataaa tgcagtggct ttggatttag tcttggagag
     8401 ctactttcta attattttat cctagcgatt aagtgtggac ttaatcttga aattctttat
     8461 aaaacctaca taggaaaaaa tattttaaat atttttagac aaaacaatgg ctataaacaa
     8521 ggtacttata agaaagattg gaacggaaaa gaagataatg aagtattggc tgaaatttta
     8581 gagcaagagc ttgattttga tactatttat aaaaaattag aagaatatta taaaaaggtg
     8641 taatttgaaa attttaagac ttgctattaa ggattttttc acacttcaat ttttgaaatt
     8701 tgccttaatt ccacttactt ttagttttat tttgatgata tttttggcaa tttttggttt
     8761 ttcttttttg cttgattatt ttaattcttt atttagtgtt ggagaagact cgttttgggc
     8821 atggttttac gctcttcatt ttgttcaaat tttaattacg cttataagtg ttttattttc
     8881 gggctttgtt ataatttttg cttcagtttt cctagccctt tttatcacct cttttcttac
     8941 tcctctcatt gtaaaacaaa tcaataacaa atactatcat cacgaagtac aaaacatctc
     9001 aaatatgtat ataatttttg aaattttcaa aatattttta aaatttatag gaattttttt
     9061 actttgcacc ttggctttgt ttttgccttt tatcaatctt tttgtgtatt atcttgcttt
     9121 ttattatctt tttcacaagc ttttaatgct tgatataaca agttcggttt tagataaaga
     9181 aaattttaaa atttttaacg ctcaagcatc tacctttgaa tttaaattca gcactttatg
     9241 tttttactta ctctcatcta tcccgctttt aggaattttt ttgcaagtat tttttgtgat
     9301 ttttttaaca catttagctt atcaaagaat tttaaaatta gaagttaagg gatgaaatat
     9361 cgattttgtg attgtataaa taagctctta aaagtcttgg tattttagcg attctgcaag
     9421 cttctttaaa ttcttttggc aatttttgac aagtttcata tttaaaaacg atagcctttt
     9481 catccttata cacgatgcct atttttccac ctaaaacaca atcgcccttc aaaaactctt
     9541 ttctttgtgc tgcgcttaaa agcaaacctt tcatttttac agccttagca atcaaacttt
     9601 catttttagg acaaatcata agaccttgaa tttcttttat agactccaaa tcatagagtt
     9661 tttttctatc ctcatcaaga taaaaaaaac ttctttttaa accttgatga aatttactca
     9721 caaaggcatt ggaaaaattt tttcttatat aatttctaaa atatttttca ttctcattac
     9781 tctcatcttg aaaataaaaa atatcattct cttttaaata acttaaaatt tcatccttac
     9841 tcataaaaag caaagggcgt aaaagtgtat aatttgagcg cttttcacac tcttgcatgc
     9901 ctaaaatttc agccaaaccc gccccacgag aaagctgcat taaaaaccac tccaattgat
     9961 cattgagatg atgagctaag ataagattgc tataattttg ctcaagacaa attttttcaa
    10021 agaaatcata acgaaaatcc ctagcttctt tttcaaaatt cccctttatc acaggagcac
    10081 tttttataaa aattttttta tgaaattcca aggcaagctc cttggctttt tgctcttcta
    10141 aatcgctatt ttttcgtgtt ttataattaa tcatcacaag atcaaaatca atcttttttt
    10201 gcactaaaaa atgaaaaagt gcactagaat cacttccata agaaaaagcg agtaaatttc
    10261 tacccttttt taacaaggat aaaatttcat ctttaatttg catctatttt tcttaaagcc
    10321 ttggctatga gctttttatc aacattttga atgatttcgc attcataaat ttgtcccatt
    10381 tccaaattcc cgcattcgct ttcattgata agaatttctc catcaatctc tctatcccat
    10441 cttaaatctt tagctgcgat aaaaaactca ccctcgctac tctcacctgt acaaacaact
    10501 aagcgctttt ttcccacttc tttttcaaaa cttttttcta tgacttcatc tacaattttt
    10561 tctatgattt taagcctttt attgatcact ttaaaaggca cttgctccat atcaaaagca
    10621 gctgtatctt cttctttaga atacgcaaaa acactcactc tatcaaaacc aaaatctttg
    10681 ataaattcac aaaactcctc aaaatccgca tcactttcac ctgggtgccc tacgataaaa
    10741 cccgtacgca aaaagctatc aggtgcactt ttcatcaaat ttaacatttc tttaagtctt
    10801 gtgctatttg ctccgcgttt cataatctta agcatattgt cgctaatgtg ttgcaaaggc
    10861 atatcaaaat aatttacaaa aattttagaa gctataatgc gcttgatcaa agcctcactc
    10921 gcacttgtag gataaagata taaaattcta gccgctttaa taccctcgat cttttctacc
    10981 tcatcaatca aacgtataag cccatctttt tcacccttat caaacaaata agaactcgta
    11041 tcttgtgcga taaaagaaaa atccttataa cccctagcca ccaaatcttt aagctcggct
    11101 ataatgctag aaatttcacg cgattttaac ttacccttaa aacttgggat cgcacaaaaa
    11161 gaacattttt gattgcaacc ttcagcgatt tttataaaag catgcgaatt agaacctgtg
    11221 atgatgcgtt tggagttttc accctgcaaa taagtcgaat ttgaaaataa attggttttt
    11281 ttaagtatca tttcatcgat tctttcataa tcacccacac cagtaaaaag atcaacttca
    11341 ggaagttctt tcataagctc ttcgcggtaa cgctgcatca aacaacccgt cacaaccaaa
    11401 agcgaatctt tttttctttg ctcatgcaaa tctaaaatcg cattgatact ttcttttttt
    11461 gcactatcta taaagccaca ggtatttacg attaaaacat cagctttact tggctcatcg
    11521 caaagctcat aagcgctaag acgccctagc ataatctcac tatcgactaa atttttatta
    11581 cagcctaaag acataagata aagttttgac atttttttcc tatattaaag ttttattttg
    11641 atataatctt tgattttaaa aatataatta tagcaaagaa attttatgga taattacgaa
    11701 tttagcgaac ttttaaaaac tttaaaaaac aaagttggca acatagcctc tatcatcaag
    11761 cctgaaaaca tccaaacaag gcttaaagag atcgaagagc ttgaaaattc tccttctttt
    11821 tggaatgatg tcaagcaagc aggaatcata ggcaaagaaa aaaccaagat taccaatcta
    11881 ctaaaaaact acgaaaatgc tttcaatgct ctaaatgacg caagcgaact tttcgatcta
    11941 gccaacagcg aaaacgatac agaaacgctt gaagctttat ttaatgatgc gccaaaactt
    12001 gaagatacca tcacaagtct tgaaatttcc atgcttttaa gcggagaaaa tgatggtaaa
    12061 aatgccattg tttccattca cccaggtgcg ggtggaacgg aaagtaatga ctgggcaagc
    12121 atgctttata ggatgtattt aagattttgc gaaagagaag gttttaaagt cgaaacttta
    12181 gactttcaag aaggcgaaga agcaggactt aaagatgtga gctttttggt taagggtgaa
    12241 aatgcttatg ggtatttaaa agctgaaaat ggaattcacc gcttagtaag aacctctcct
    12301 tttgatagcg cgggacgccg ccacacaagc ttttcaagcg ttatggtaag ccctgaactt
    12361 gatgatgata tagaaataga aatcgaagaa aaagatataa gaatagatta ttatagggca
    12421 agtggagcgg gtggacaaca tgtcaacaaa acagaatcag ccgtaagaat cacacatttt
    12481 ccaaccggta tagtcgtgca atgtcaaaat gatagaagcc aacacaaaaa caaagccacc
    12541 gcttttaaaa tgctaaaatc ccgcctttat gagcttgaac tcatgaaaca acaagatagt
    12601 gctaatgcag gtgaaaaaag tgagataggc tgggggcatc aaatccgctc ttatgtgctt
    12661 ttcccttatc agcaagttaa agacaatcgc agtggagaag ctttttctca agtagataat
    12721 atccttgatg gggatatcaa aaaaatgata gagggtgttt tgattgcttt aaaatcagag
    12781 taacaggctt aaaaataagt aatttccgca aaatgtcggt ataaaaagaa ttagaaagat
    12841 agcgggattt tcccgcttgt tttattttaa actccacgcc ctgtagcatt ttctattttg
    12901 caattttcca ctttgctatc ttcgcaaatt aaagcccaaa attccctttt atcgctctta
    12961 tctttattga cactaaatat catatattga taacctttaa cactgccata aagtcggaag
    13021 tcttttgatt ttaaatattt gtatcttttt tcatcgaaat tttttaaagt ttctggagaa
    13081 taaaaatcca tattagcatt attgtttttt gctttaatta actcaaaacc tttttccaca
    13141 aaagaattta attcgttttt attaaatttt ccacaaaacg atcatcaccg ccacaaccta
    13201 taatcaaagt catagctcct aaagccaaag cacttgtta
//
LOCUS       DBBXOW010000050        12648 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.051, whole genome shotgun sequence.
ACCESSION   DBBXOW010000050 DBBXOW010000000
VERSION     DBBXOW010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12648
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.051"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            81..770
                     /locus_tag="ACJE1S_001336"
     CDS             81..770
                     /locus_tag="ACJE1S_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HGG0806877.1"
                     /translation="MDKLIPAWDEKYSINDEKIDAQHQKLFELAAKIENAVYKFVQRD
                     ELKEILTELFNYMKDHFSNEEDYMQEISYPYLNEHKIMHKNIIHDMSHLIQNIKTTND
                     LKEKLYTIMSDWLLEHILHHDVMIGNWLSEQLLAKQEEELEKLQQEDLQQEKQYENNP
                     NPSPPQIKKEYDFIYSCPCRTNHFLSYIEHLDIICHKKQLRCKKCQKNLFYVRSEIKT
                     EKRNNDVSKVG"
     gene            751..1362
                     /locus_tag="ACJE1S_001337"
     CDS             751..1362
                     /locus_tag="ACJE1S_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HGG0806878.1"
                     /translation="MFPKWDDNYSVHNAKIDEQHKKLFELAGKVEFMFDRPVYKDDIK
                     ALLADFFNYMKDHFNDEEKYMKLIGYPGLEEHKKIHKEIIQSMIDLIKNIKSTNDLKE
                     KLYTVSKKWLLEHILYEDMKVEQYRRSSLSSEDDSEVSFEEVKEEKDDETALYFYTCE
                     CVGQIHDVPFGIHQKIQLKGAKFKCKKCKMAIQFYKKHSESFE"
     gene            1400..1594
                     /locus_tag="ACJE1S_001338"
     CDS             1400..1594
                     /locus_tag="ACJE1S_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806879.1"
                     /translation="MLLWTKKIKYYISNKTKYSYPILTKDVQCSNCKNFYSIEFASNL
                     KKIEKECPSCKTKMDIKLKD"
     gene            complement(1591..2622)
                     /locus_tag="ACJE1S_001339"
     CDS             complement(1591..2622)
                     /locus_tag="ACJE1S_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HGG0806880.1"
                     /translation="MKKNIVFFEVRGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKNEIYNYVKENFDGYVSRINPGNLKEENEYFDMLRKLCQEGLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGEVKGDILPLDTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAQYRYDKPEDWQNLVDMFLGEL
                     PKVRAKLGNYDLPLIWTADFILDNDEKGNDKYVLGEINCSCVGFTSHLELADEVAQNI
                     INIVSKAKN"
     gene            complement(2730..3626)
                     /gene="sppA"
                     /locus_tag="ACJE1S_001340"
     CDS             complement(2730..3626)
                     /gene="sppA"
                     /locus_tag="ACJE1S_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HGG0806881.1"
                     /translation="MQILKSFFKGLGSVIKFINTYFKTFVLLLIVIWLLVPSSNSSSS
                     YANLERIDLKGEILDSSELLEKIISAKNNDNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKTKKPVIAYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSELAKKIGI
                     KEQTIQAGEFKSAGTFTRAWSEEEREFLQNLIDESYDLFSEFVAKERDLELDKRKDWA
                     NARVFLAQNAKDLGLIDELSNYENAKKELQELAKVLNPVWKEEGRIDRFLNRLESQSS
                     NFLGKVISDTVLRLNANFLELK"
     gene            complement(3614..4843)
                     /locus_tag="ACJE1S_001341"
     CDS             complement(3614..4843)
                     /locus_tag="ACJE1S_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HGG0806882.1"
                     /translation="MYIISAKYIFLCDEQFSILENKAFVFENEILELGELEELKKRYP
                     EAKLIKTSPNCVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNEQAKE
                     ELILKNIQKMQKSGIGTIGEISSFGSDLNPCVRASQNGMRVVFFNEILGINEAQIQDK
                     KQEFLTRFEKSLKFKDEFFIPAISVHSAYSTHPELAKFAINLAKKQKLLISTHFLESK
                     AENAWLKEAKGGFKEWFKNFTPDPKPLYKASEFIQLFKGVRTLFTHCVYLKEMDLLDK
                     NLHSITHCAFSNRLLSQKTFDLKKALKSGLNIHLGTDGLSSNISLSILDEMRASLLVH
                     TDFDLLKLAPKLLQMATLYPAKALNLNLGEIKQGKMADFSVFELGECNKEQAPLQFIL
                     NAKEVQKLFIKGKECKF"
     gene            4936..5424
                     /gene="aroQ"
                     /locus_tag="ACJE1S_001342"
     CDS             4936..5424
                     /gene="aroQ"
                     /locus_tag="ACJE1S_001342"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HGG0806883.1"
                     /translation="MKVMVIQGPNINMLGVREVRIYGAMKMEDIHTQMKMAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAISAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGSIVGFGPFGYHLALMGIIQICEQVKNLHAAQAQQMQARA
                     QN"
     gene            5427..5909
                     /gene="folK"
                     /locus_tag="ACJE1S_001343"
     CDS             5427..5909
                     /gene="folK"
                     /locus_tag="ACJE1S_001343"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HGG0806884.1"
                     /translation="MLKIKGARRLETSRFFPYFSQNKKEFKYLALVGLGSNIEPEKKR
                     FNKLFRVMMEDRRFKILATSPFLINEAFGFKAQKDFTNAAMLIQTNLHARAFLKVLLF
                     YELKFKRKRTFKNAPRTLDLDLLYFSQKVKRDEGCMVPHIGANQRISVILPLGLTKGL
                     "
     gene            5910..7340
                     /gene="flhF"
                     /locus_tag="ACJE1S_001344"
     CDS             5910..7340
                     /gene="flhF"
                     /locus_tag="ACJE1S_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HGG0806885.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRA
                     ALYEVMVAIEESDYEEHLKKMGKSLPPKKTIAKTLEKQNLEEKVNASIPQNNEDEDVI
                     LDFSNTRANLAKTKTSDTNYQDFPQSKINPNPTMGFNDFKERLSEVSNEISKVTNTPL
                     VDNYAPNPNYNKKIENFEKQINKLNDKIDLLADMMWDEKAEARNNLIIPPEFATIYKK
                     AKESGMLEKHLEAIMKATIENMPAAMKTNKDAVQRYFYSLLRNILPCRVESEIKKQKI
                     MMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKLPI
                     IDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQNKLAKTKEFLMHSNAEIDVSLVVS
                     ANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSFFSTGQEVP
                     DDIEVANSDFLVRCILEGFNKGKDNE"
     gene            7333..8199
                     /gene="flhG"
                     /locus_tag="ACJE1S_001345"
     CDS             7333..8199
                     /gene="flhG"
                     /locus_tag="ACJE1S_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HGG0806886.1"
                     /translation="MNNQANKLRSLMNQNGGKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMSDEVVV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNRL
                     NLEFLGHLSASKDVSGSIKKRTLFTDENSASSDELKALASKLLYRLERKVLDNVTSRS
                     FSNFFRKIIERF"
     gene            8219..8575
                     /locus_tag="ACJE1S_001346"
     CDS             8219..8575
                     /locus_tag="ACJE1S_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806887.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIEEAFDILISTCFITFMFY
                     VFIHIAIMNFIDIKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNESKERRKNAKRAA"
     gene            8556..9248
                     /locus_tag="ACJE1S_001347"
     CDS             8556..9248
                     /locus_tag="ACJE1S_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HGG0806888.1"
                     /translation="MQKEPPKAYAQMIKDEQDQLVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDSFWGFARKRVNGAMLDFLRSLDVMSRNNRKIIK
                     DIDILIDEYFREHEEEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDDQLELYNED
                     DTLEKLEKEQLLEKIHEVLEDLKERDQLIIQLYYYEELSLKEISEILEISESRISQIH
                     KKLLKKLRERLV"
     gene            9248..10324
                     /gene="fliM"
                     /locus_tag="ACJE1S_001348"
     CDS             9248..10324
                     /gene="fliM"
                     /locus_tag="ACJE1S_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HGG0806889.1"
                     /translation="MAEILSQEEIDALLEVVDDNTNTPTASEKDGKDERNIVVYDFKR
                     PNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSPT
                     SFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILRI
                     IMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNICY
                     PVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEFL
                     ELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEIL
                     EKYEEERKAKASVYDEPEEEEEEI"
     gene            10321..11157
                     /gene="fliY"
                     /locus_tag="ACJE1S_001349"
     CDS             10321..11157
                     /gene="fliY"
                     /locus_tag="ACJE1S_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HGG0806890.1"
                     /translation="MINEFLKLFTNECTSTIEGLTGKSAEFSEYKEFDVSSQDTLKPP
                     LVYAVFNIKEGGKIGILAGAVLMSAIGEWMMGEEEISKNDQLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFEISSCEFVAENVDFKDFTKLYFFDVKIEDLEEQISLIVDQ
                     TLHNILSGKAADDGHAHSSSNSENKGFEISEELKNINLIMDVRLPVRVRIGNKKMLLK
                     DVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERLEQ
                     LR"
     gene            complement(11206..11805)
                     /locus_tag="ACJE1S_001350"
     CDS             complement(11206..11805)
                     /locus_tag="ACJE1S_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG0806891.1"
                     /translation="MEKILKILLFLPILALSTKAEWVVKSYQEIKNERVIRQTYEQSC
                     GASSLATLLNILDDQKKFDELELLKIMSGQELYTDMVSFADLNDAVKKLGFQSNSYQI
                     NGENLDKLVNIPMLVKIEDDPRFPHFVVIINHKGNYLQVLDPIHGEYISSKNQFFSIW
                     DRYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
     gene            complement(11790..12644)
                     /locus_tag="ACJE1S_001351"
     CDS             complement(11790..12644)
                     /locus_tag="ACJE1S_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806892.1"
                     /translation="MKKIFLTFMVLVNCVFASDELNIDSLFKKQIGLRSITSFSLLST
                     GNANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYTLTPKFDILISGGGSYARQEYTN
                     FFTNAYSHKDRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKS
                     QSLQASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLD
                     LGAEQRFQMKQKINGYQNSEVRSIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIF
                     GISLWKKF"
BASE COUNT         4601 a         2045 c         1989 g         4013 t
ORIGIN      
        1 aatattgatt taatataaaa tacgataaca tacctcaata tcaaaacata caaataattg
       61 agatttattt ggagaaaact ttggataaat taattcctgc ttgggatgaa aaatacagca
      121 taaatgatga gaaaatagac gcgcaacacc aaaaactttt tgaattagct gctaaaattg
      181 aaaatgctgt ttataaattc gttcaacgcg atgagcttaa agaaattctt accgaactct
      241 ttaattatat gaaagatcac ttcagtaatg aagaggatta tatgcaagag atttcttatc
      301 cttatttaaa tgaacataaa ataatgcaca aaaacattat ccacgatatg tcgcatctta
      361 tccaaaatat aaagactacc aatgatttaa aagaaaaact ttatactata atgtcagatt
      421 ggctattaga acatatttta catcatgatg ttatgatagg aaattggctt tcagagcaat
      481 tattagccaa acaagaagaa gagctagaaa aacttcaaca agaggatctt caacaagaaa
      541 aacaatatga aaacaatcca aatccaagcc ctcctcaaat caaaaaagaa tacgatttta
      601 tctattcttg cccttgtaga acaaatcact ttctttccta tatagagcat cttgatatta
      661 tttgtcataa aaaacaacta agatgtaaaa aatgtcaaaa aaatctattt tatgtaagaa
      721 gtgaaatcaa aactgaaaaa aggaataatg atgtttccaa agtgggatga taattatagc
      781 gttcataatg ccaagattga tgagcaacac aaaaaacttt ttgaattagc aggtaaggtt
      841 gaatttatgt ttgatcgacc cgtgtataaa gatgatatca aagctctatt ggctgatttt
      901 tttaactata tgaaagatca ttttaatgat gaagaaaaat atatgaagct tataggatat
      961 cctggcttag aagagcataa aaagatacat aaagaaatca tccaatccat gatagacctc
     1021 attaaaaaca taaaatcaac caatgattta aaagaaaaac tttacacggt ttctaaaaaa
     1081 tggctcttag aacatatact ttatgaagat atgaaagtag aacaatacag acgctcttct
     1141 ttatcctctg aagatgatag tgaagtaagt tttgaagaag taaaagaaga aaaagatgat
     1201 gaaacagctt tatattttta tacttgcgag tgtgttggac aaattcacga tgtgcctttt
     1261 ggaattcatc aaaaaataca attaaaaggt gctaaattta agtgtaaaaa atgcaagatg
     1321 gccatacaat tttataaaaa acattccgaa tcttttgaat aataactatt ctatagtaga
     1381 atgaaataaa aaataattga ttctactatg gacaaaaaaa ataaaatatt atatctcaaa
     1441 taaaacaaag tattcttatc ctattttaac caaggatgtt caatgctcta attgcaaaaa
     1501 tttttactcg atagaatttg cttcaaattt gaaaaaaata gaaaaagaat gcccatcttg
     1561 caaaacaaaa atggacatta agcttaaaga ttagtttttt gccttgctta caatattgat
     1621 gatattttga gcaacttcat cagcaagttc taagtgcgaa gtaaagccta cgcaagagca
     1681 atttatctca cctaaaacat atttatcgtt gcctttttca tcattatcta aaataaaatc
     1741 agctgtccaa ataagcggta aatcataatt acccaatttt gcacgcacct taggaagttc
     1801 tcctaaaaac atatctacca aattttgcca atcctcgggt ttatcatagc ggtattgcgc
     1861 cccactaaaa agcgttgcag aaaaagcatc ggcatcttca gctggttttt tatgcactac
     1921 atttacagga gtgttataaa gcattaaaag tcttatctct ccttctttaa tgcgtggtaa
     1981 aaaagtcata tctacaagca taccattatc acctatgata tattgctcac aaaaatccat
     2041 aaattcaccc agttctctat gctctacatg attgtctttt gcttcggtac atttgatttt
     2101 agtatctaaa ggcaaaatat ctccttttac ttcgccctct acactcacac gccaaattcc
     2161 ctcacctgta gaaccgcgat tttgctttaa aaccctttct cccttagcta aactttttgg
     2221 aaaattttct ttaaaagtct tgatatcata gtatgcataa gtatcacttg gcacaagatc
     2281 tgtatctgca agttttgtta aagcgtcttt ggctccataa cctatcatcg catcaggatg
     2341 aggcataccc acaagacctt cttggcaaag ttttcttagc atatcaaaat actcattttc
     2401 ttctttaaga ttgccaggat taatacgcga aacataacca tcaaaatttt cttttacata
     2461 gttataaatt tcattctttt tgcctacttc aaaaaaaatc acctcggcat tccaaccctt
     2521 agcttttaaa gcatttacca taggcatagt atcttttcta tagccatctt cacccttatc
     2581 gctaccgcct ctaacctcaa aaaagactat attttttttc attgcactgc tccttttaag
     2641 ttaaaatata aacaattatt tcataaaaat gttataaaag ttaaacgaat aagaggcttt
     2701 ttctcctata agatataaaa aatttagaat tattttaatt ctaaaaaatt cgcattcaat
     2761 ctaagcacag tatcacttat cactttacct aaaaaattgg aactttgact ctctaaacga
     2821 tttaaaaatc tatcgattct accctcttct ttccaaacag gatttaaaac tttagcaagt
     2881 tcttgaagtt ctttttttgc attttcataa ttgcttaatt catcaataag tcctaaatct
     2941 tttgcatttt gtgctaaaaa cacccttgca tttgcccaat cttttctttt atctaattcc
     3001 aaatcgcgtt ctttggctac aaattctgaa aaaagatcat aactttcatc aatcaaattt
     3061 tgcaaaaatt ctctctcttc ttcactccaa gcccttgtaa aagttcctgc actcttaaat
     3121 tcccctgctt gtatggtttg ttctttaatc cctattttct tagccaactc actcaaatca
     3181 gcaccctgca taatcacacc tatagatcct ataaaactag caggatttgc caaaatttta
     3241 tttgctccta ctccagccaa gtaactccca ctcgccatag tcccacttgc ataagctata
     3301 acaggttttt tagtctttaa atccttaata gccaaagcta gctccatact tggagcaaaa
     3361 gcacccccag gagaatctat cacaaaaagc acgcctttaa tattatcatt atttttagca
     3421 ctgataattt tttccaaaag ttctgagcta tctaatatct cgccttttaa gtcaatgcgt
     3481 tctaaatttg catatgatga gcttgaattt gagcttggta ccaaaagcca aatcacgatc
     3541 aacaataaaa caaaagtttt aaaataagta ttgataaatt ttatcacgct acccaaaccc
     3601 ttaaaaaatg attttaaaat ttgcattctt ttccttttat aaataatttt tgcacttctt
     3661 tagcatttaa aataaattgc aatggcgctt gctccttgtt gcattctcct aattcaaata
     3721 cactaaaatc agccattttt ccttgcttga tttcacctaa atttaaattt aaagctttag
     3781 ctggataaag cgttgccatt tgtaaaagct taggagctaa ttttaacaaa tcaaaatctg
     3841 tatgcacaag caaactagca cgcatttcat ctaaaatcga taaagaaata ttagaactta
     3901 aaccatctgt acccaaatgg atatttaagc cgctttttaa agcctttttt aaatcaaatg
     3961 ttttttgact taaaagacga tttgaaaaag cacaatgggt aatagaatgt aaatttttat
     4021 caagcaaatc catttctttt aaatacacac aatgggtaaa aagcgtccta acacctttaa
     4081 ataattgaat aaattcacta gctttataaa gaggcttagg atctggcgta aagtttttaa
     4141 accattcttt aaaccctcct tttgcctctt taagccaagc attttcagcc ttactttcta
     4201 aaaaatgcgt actgattaat aacttttgct ttttagcaag attgattgca aattttgcaa
     4261 gctctggatg agttgaataa gcagaatgca cagaaatagc aggtataaaa aactcatctt
     4321 taaattttaa agatttttca aatcttgtta aaaactcttg ttttttatct tgaatttggg
     4381 cttcatttat gcctaaaatt tcattaaaaa atacaacacg cattccattt tgacttgctc
     4441 taacacaagg atttaaatcg ctgccaaagc ttgaaatttc acctatagta cctataccgc
     4501 ttttttgcat tttttgaatg ttttttaata taagctcttc tttagcttgc tcatttaaca
     4561 tagaacgaga gttaatcacg cttttaagcc aaattaaaaa ttctccaaaa tgcaaagtgg
     4621 tcgaatttgc gctaaattct aaatgggtgt gcggattgat aaaagcaggc aaaatgacgc
     4681 aattagggct tgtttttata agcttagcct ctgggtatcg tttttttaat tcttctaatt
     4741 cgcctaattc taaaatttca ttctcaaaaa caaaggcttt gttttctaaa atactaaatt
     4801 gctcgtcaca taaaaagata tattttgcac tgattatata cattcttttt tccttgaata
     4861 aaatcacatt gtagcgaaaa tttattttaa aatgttataa taaaaggtta aaaataaaaa
     4921 ttttaaggca aaattatgaa agtaatggtc atccaaggcc caaatatcaa tatgctaggc
     4981 gtaagggaag ttagaattta tggtgcaatg aaaatggaag acattcatac tcaaatgaag
     5041 atggcagctt ctcaaaacaa tgttgaatta gatttttttc aaagcaattt tgaaggcgaa
     5101 attgtagata aaattcaaga atgtcttggt acagtagatg gtataatcat caatgctgca
     5161 ggctatactc atacttcagt agccattcgt gatgcgattt ctgcagtggc tttacctacg
     5221 atagaagtac acatcagtaa tgtttatcgc agagaagaat ttcgtcaaaa aagccttata
     5281 gctcctgtat gttctggatc tatagtagga tttggtcctt ttggttatca tttagcttta
     5341 atgggcatta ttcaaatttg cgagcaagta aaaaatttgc atgctgcgca agcacagcaa
     5401 atgcaagcta gggctcaaaa ttaaaaatgc taaaaataaa aggagcaaga cgacttgaaa
     5461 caagccgttt ttttccttat tttagccaaa acaaaaaaga atttaaatac cttgctctag
     5521 taggtctagg aagcaatata gagccagaaa aaaaaaggtt taacaagctt tttcgtgtaa
     5581 tgatggagga tagaaggttt aaaattttag ccacatctcc atttttgatc aatgaagctt
     5641 ttggttttaa agctcaaaaa gattttacga atgcagcaat gcttatacaa acaaacctac
     5701 acgcaagagc ttttttgaaa gttttacttt tttatgagct taaatttaaa agaaaaagaa
     5761 ctttcaaaaa cgctcctaga acacttgatt tagatctttt atatttttca caaaaagtca
     5821 agcgtgatga ggggtgtatg gtgcctcata taggggctaa tcaaagaata agtgtaattt
     5881 tgcccttggg cttaacaaaa ggattgtaaa tgggacaact tatccatacc tttactgtag
     5941 aagatacaga gcaaattatc ccgaaagtaa aagaggatta tggcgacaaa gctttaatta
     6001 ttaccaataa acaaattcgt cccaaaacac ttaaccgcgc tgctctttat gaagtaatgg
     6061 ttgctataga agagagtgat tatgaagagc atttgaaaaa aatgggaaaa tccttgcctc
     6121 ctaaaaaaac tatcgctaaa actttagaaa aacaaaatct tgaagaaaaa gtcaatgctt
     6181 caataccaca aaataacgaa gatgaagatg tgattcttga tttttcaaat actagggcaa
     6241 atttagcaaa aaccaaaact agcgacacta attaccaaga ctttccacaa agtaaaatca
     6301 atcctaatcc caccatgggt tttaacgatt ttaaagaacg cttaagtgaa gtaagcaatg
     6361 aaatttcaaa agtaaccaat acccctttgg tagataatta tgcacccaat ccaaactata
     6421 ataaaaaaat agagaatttt gaaaaacaaa tcaataagct taatgataaa atcgatttac
     6481 tcgcagacat gatgtgggat gaaaaagcag aagctcgcaa caatcttatc attcctcctg
     6541 aatttgcaac catttataaa aaagccaaag aaagcggtat gcttgaaaag catttagaag
     6601 ctatcatgaa agccactata gaaaatatgc ctgcggccat gaaaacaaac aaagacgctg
     6661 tgcaacgata tttttattct cttttgagaa atattttacc ttgcagggta gaaagtgaaa
     6721 tcaaaaaaca aaaaattatg atgcttgtag gcccgacagg ggttggaaaa accacaactt
     6781 tagcaaagct agcttttcgt tatgcttatg gagataagcg ctataaaaca ggtataatca
     6841 ctttagatac ttatagaatc ggtgctgtag aacaactttt ccaatatgca aaaatgatga
     6901 aacttcccat catcgatagt atagaaccaa aagatttgga cgaggcgatt aaaagtctta
     6961 ataactgcga agtaatttta gtcgatacta taggaaattc gcaatacgat caaaacaaac
     7021 ttgccaaaac aaaagaattt cttatgcatt caaatgctga aattgatgtt agtctagtcg
     7081 tttctgctaa taccaagcat gaagacctga tggaaattta caaaaatttt tcatttttaa
     7141 atatcgacac ccttatcatc accaaatttg atgaaactaa ggtttttgga aatattttct
     7201 ctttaattta tgaaactaat atcccactaa gctttttctc tacaggacaa gaagtgcctg
     7261 atgatataga agtagccaat agcgattttt tagttcgctg tatcttagaa ggttttaaca
     7321 aaggaaaaga taatgaataa tcaagccaat aaactccgta gccttatgaa tcaaaatgga
     7381 ggaaaaaaat cacaaaacac tcattttata gcgattacaa gtggaaaagg tggagtaggt
     7441 aaaagcacca ttagcgcaaa tttggcaaat gtacttgcta ataatggata taaagtagga
     7501 ctttttgatg cagatattgg cttagcaaat cttgatgtta ttttaaatgt tcgcattcaa
     7561 aaaaatcttt tacatgtttt gcgcggagaa tgctctttag aagatatttt gatcgaagta
     7621 aagccaaatt tatggctcat ccctggtgaa agcggtgatg aaattttaaa atacaacgat
     7681 aaaaacattt atgaaagatt tttaaatcaa gcaagtattt tagatgagct tgattttctt
     7741 atcatcgaca caggtgcagg aataggagga aatatactga atttcttaga aatgtcagat
     7801 gaagttgtag tagtaaccgt tcctgatcct gctgcgatta ccgatgcata tgcaaccatt
     7861 aaaaccacct ctaagacaaa agaaaattta ctgatgctat ttaatgttgt caaaaatgaa
     7921 aatgaggctt taaaagtttt tgaaaatatt aaaaaagttg ctgatgcaaa tataaaaaat
     7981 cgtttaaatt tagaattttt aggacacttg agcgcttcaa aagatgtaag tggtagcatt
     8041 aaaaaacgca ccttgtttac agatgaaaat tctgcttcaa gtgacgagct taaagcccta
     8101 gcttccaagc ttttatatag gttggaacgg aaagtgcttg ataatgtcac aagtcgaagt
     8161 ttttcaaatt tctttaggaa aatcatcgaa cgattctaag caataaagag aagatattat
     8221 gagacctgaa aattatgtag cattttttac cgtttgcgga ttttttatag gattggcttt
     8281 tagtattatt agtatagaag aagcttttga tattttaatt tctacttgtt ttattacttt
     8341 tatgttttat gtttttatac acattgctat tatgaatttt atcgatatta aaaaaatcag
     8401 tgggcgaatt ttcaataaac atgattatga aaagactagc aataatatta taaatgactt
     8461 agtcattcgt gaaaagaaaa tggatataat cttagaaaag cttaacgaag aaagagaaga
     8521 gcttaagaaa aacgaatcaa aagaaagacg caaaaatgca aaaagagccg cctaaagcct
     8581 atgctcaaat gataaaagat gaacaagatc agctagtttt atcctatatg cctgcacttc
     8641 gtgcaatggc ttttagacta aaagaacgct tgccttctag cattgatgta aatgatctaa
     8701 ttagcattgg cgttgaagaa atgatcaagc tttcacgccg ctacgataaa gagcaaaatg
     8761 atagtttttg gggatttgct agaaagcgtg ttaatggcgc tatgcttgat tttttacgct
     8821 ctttggatgt aatgagtcgc aataaccgta aaatcattaa agatattgat attttaatcg
     8881 acgaatattt tagagaacat gaagaagagc ctgatgatga atatctagct aaaaagcttg
     8941 atttggatgt agaaaagatt aaagaagtgc gcaccgcaca tgctattagc tatactttac
     9001 ccattgatga tcaattagag ctttataatg aagatgatac tttagaaaaa ttagaaaaag
     9061 aacaactttt agaaaaaatt cacgaagtat tagaagatct taaagaacgc gatcaactca
     9121 tcatacagct ttattattat gaagaactca gtcttaagga gattagtgaa attttagaga
     9181 ttagcgagag tagaatttca caaattcata aaaaactttt aaaaaaactt agagaaaggc
     9241 tagtgtaatg gcagaaatac tctcccaaga agaaattgac gctctacttg aagttgtcga
     9301 tgataatacc aatacgccta cagcctctga aaaagatgga aaagatgaaa gaaatatagt
     9361 tgtatatgac tttaagcgtc caaatagggt atctaaagag cagcttagga caattaaagg
     9421 tatacacgat aaactagcaa gaaatttagc ttctcaaatt tcgtccatga tgagaagtat
     9481 tgttgaaacc aaacttcact cggtggatca aatgacttat ggtgagtttt tgatgtcgct
     9541 accaagccct acaagcttta acgttttctc tatcaagcct cttgatggaa actgcgtttt
     9601 agagattaac ccaagcattg cttttcctat gatagataga cttttaggag gtcaaggcga
     9661 tagctatgag gcttcgcgag agcttactga tatagagctt aatttgcttg attctatttt
     9721 gcgtatcatc atgcaaagac ttaaagaaag ctgggctaca gtaactgaaa tttatcctag
     9781 tatagaagct aaagaatcaa gccccaatgt tgtacaaatc gtatcgcaaa acgaaatcgt
     9841 tatcatggtg gtgatggaaa tcatcatagg aaattcaagc ggtatggtaa atatctgcta
     9901 tcctgttgtc catttagaaa gtatcttgag tcgtttagca aaccgtgata ttatgatggg
     9961 tgaaacctca gccaaaaaat cacgcaacaa agaacttaaa actttaatcg gtcgtgctga
    10021 agtggtatat gaggcaattt taggaaaaac cttaattaat gttcatgaat ttttagaact
    10081 taaacaaggc gatattttaa ggcttgatag agaagcagac gataaagcta tagtaagtat
    10141 cgataaaaaa gatgttttct tagcacaaat tggattgcat cgttttagaa aatctattaa
    10201 aattttagaa cttatacgca cagataaaga tgaaatcaaa gaaattttgg aaaaatacga
    10261 agaagagcgt aaagctaaag ccagtgttta tgatgagcct gaagaggagg aagaagaaat
    10321 atgatcaatg aatttttaaa attatttaca aacgaatgca caagcaccat agaaggactt
    10381 acaggaaaaa gtgcagaatt tagcgaatat aaagaatttg atgtttcatc acaagataca
    10441 ctcaaaccgc ctcttgttta tgcggttttt aacatcaaag aaggtggcaa aataggtata
    10501 ttagcaggtg ctgtacttat gagtgctatt ggtgaatgga tgatgggcga agaagaaatt
    10561 tctaaaaacg atcaactagg ccctgatgaa atggacgctg ctaaagaagc aattcaaaac
    10621 atcatttcgg ctttttctac cactttaggc gcacaaaaag acataccaaa aatggatttt
    10681 gaaatcagct cttgcgaatt tgtagcagaa aatgttgatt ttaaagattt tacaaaactt
    10741 tatttctttg atgtcaaaat agaagactta gaagagcaaa tttctttaat tgtagatcaa
    10801 actcttcata atattttaag cggcaaagct gcagatgatg gccatgcaca ctctagctca
    10861 aattcagaaa ataaaggttt tgagataagt gaagaactta aaaatatcaa tctcatcatg
    10921 gatgtgcgtt tgcctgttcg tgtgcgtata ggcaataaaa aaatgctttt aaaagatgtt
    10981 ttaactatgg atataggctc agttgtggag cttaatcaac ttgcaaacga tccgcttgaa
    11041 attttaatcg gggataaaag aattgcttat ggcgaggtag taattgtcga tggtaatttt
    11101 ggtgttcaaa ttacagaaat tggttctaaa aaagaaagat tagaacaact aagataaaaa
    11161 gttttagcct gcaaattaag aataataaat ataaataaat taaaactaaa acaaactaaa
    11221 agggctgaaa tcaaaatgta aagattttgg agtgtttaac ttaaaaggtt ttagctcttt
    11281 tttaggagca acaattaaag cataaccgcc tttattatat ctatcccaaa tactaaaaaa
    11341 ttgatttttg gaacttatat attctccatg aattggatca agcacttgta aataattacc
    11401 tttatgatta ataattacca caaaatgtgg aaagcgtgga tcatcttcaa tttttacaag
    11461 cattggaata tttacaagtt tatccaagtt ttctccattg atttgatatg aattgctttg
    11521 aaagcccagt tttttaactg catcgtttaa atctgcaaag cttaccatat ccgtataaag
    11581 ttcttgtccg ctcataatct ttaaaagttc aagttcatca aacttttttt gatcatcaag
    11641 tatattgagt aaagttgcca aagatgaagc cccacaagat tgctcgtaag tttgccttat
    11701 tactctttcg tttttaattt cttgatagga tttaactacc cattccgctt ttgtactcaa
    11761 agcaagaatg ggtaaaaata ataaaatttt tagaattttt tccataagct tatcccaaat
    11821 atactatcag gagaagcaga gcttcctcca aaactagcat taacagaaac tgcggtatct
    11881 gaattaatgc tataagtaga acctaaactc aaagttggaa tagaacgcac ttcagaattt
    11941 tgatagccat tgattttttg tttcatttga aatctttgct ctgctcctaa atctaaagta
    12001 attttaggac ttagaataat agataaatcc ccgcccacat aaatactatt tccatactct
    12061 attttaaggg ttttaaattt tcttgattga ttataaccaa atcctgtata aatactataa
    12121 actacaggat cgctatatcc ccttaaacta gcttgtaagc tttgtgattt tagataaaag
    12181 tttttggttt gattgattgc tttttctctt tgaacgactg cagtttgaaa ggtaatttgt
    12241 ggaattaaat ctgcaatgct atcgcctgta taaataaaac ctagccatag attatcaaat
    12301 cctatgcgat ctttatggga atatgcattt gtgaaaaaat ttgtatattc ttgtcttgca
    12361 taacttccgc cccctgaaat aagtatgtca aacttaggtg ttagggtata aatgaaagtt
    12421 tgagttaaaa acacttgctt tgtatcattc caaattgtag gatctccgcc tattgttata
    12481 ttaggataaa gagaatacga gtttgcgttt cctgtgctaa gtaaagaaaa gcttgtaatg
    12541 cttcttaagc ctatttgctt tttaaataaa ctgtctatat ttagttcatc gctagcaaaa
    12601 acacaattaa ctaaaaccat aaatgttaag aaaatttttt tcattgtc
//
LOCUS       DBBXOW010000051        12477 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.052, whole genome shotgun sequence.
ACCESSION   DBBXOW010000051 DBBXOW010000000
VERSION     DBBXOW010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12477
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.052"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(30..386)
                     /gene="rplS"
                     /locus_tag="ACJE1S_001352"
     CDS             complement(30..386)
                     /gene="rplS"
                     /locus_tag="ACJE1S_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HGG0806893.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPEFRAGDTLRLAIRIKEGDKTRIQN
                     FEGICIARRGNGVDETFIVRKMGANNVGVERIFPIYSESLESITVVRKGRVRRARLFY
                     LRDRRGKAARIKELKK"
     gene            complement(397..1101)
                     /gene="trmD"
                     /locus_tag="ACJE1S_001353"
     CDS             complement(397..1101)
                     /gene="trmD"
                     /locus_tag="ACJE1S_001353"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HGG0806894.1"
                     /translation="MKFSFVSLFPNLLEFYFKDSILARAIQKELFQLDFLNPRNFTDN
                     IYHKVDDYKIGGGAGLLMQIKPLYNTLKFIKDSEKDPYFIFLNPSGKTFNQKDAKRLS
                     KKENIVFVCGRYEGIDERVIEIFANEVFSIGDFILTGGELPALTLCDAIARNINGVLG
                     NACSLEEESFENDLLEAPSFAKPFIFEQNFKKFYTPSEFLKGNHAKIATLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            complement(1098..1637)
                     /gene="rimM"
                     /locus_tag="ACJE1S_001354"
     CDS             complement(1098..1637)
                     /gene="rimM"
                     /locus_tag="ACJE1S_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803049.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HGG0806895.1"
                     /translation="MSKRNFIQVAKLGKTVGLKGYLKLYNLSDFIQQFKKGASFFTEN
                     GKSQLKIKHYNLANSSVLFEGYENVEAAKQLINLILYQSIEATRQTCILKKDEFFYFD
                     ILKCEVFDDERRLGKVVDILEVGDSYLFEIQSDQELIDKAYAKTFFIPYIDKYVNKID
                     IEKYSIFCTKDVFLILENS"
     gene            complement(1630..1872)
                     /locus_tag="ACJE1S_001355"
     CDS             complement(1630..1872)
                     /locus_tag="ACJE1S_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HGG0806896.1"
                     /translation="MVENFLREYAKLIADYPDKIATEKIKLDENFAEIILYADKIDTG
                     KLIGKNGKMINAIKTVVSACKSKDSMSYRVTVKALE"
     gene            complement(1878..2105)
                     /gene="rpsP"
                     /locus_tag="ACJE1S_001356"
     CDS             complement(1878..2105)
                     /gene="rpsP"
                     /locus_tag="ACJE1S_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HGG0806897.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVVKFDSERLAYWKSVGAKLSDKVASITSK"
     gene            complement(2173..3510)
                     /gene="ffh"
                     /locus_tag="ACJE1S_001357"
     CDS             complement(2173..3510)
                     /gene="ffh"
                     /locus_tag="ACJE1S_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HGG0806898.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALDTLKKALLKADVHHK
                     VVKDLLLLIEEDVKKNGIGQKQFLEAIKTNLENILNADGKNQGFVFATKPPTVVLMVG
                     LQGGGKTTSTVKLANYLKLRNKKVLIAACDLQRLAAVEQLKQLCEANELDLFYIENEK
                     DPIKVAQQALEKAKNSMADVLLVDTAGRLAIDEALMNELKAVKNVLNPDEIFYVADAM
                     SGQDGVKTASSFNELLGITGVILSKFDADTKGGIALGITKQIGIPLRFVGVGEKIADL
                     EIFIPERIVNRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLTQMESV
                     KKLGSMKSIIGMIPGLSNVASSVKDLDLDNSKEIIHIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFANAAKLAKRFSGKKGMDSLMQMMNQARRQF"
     gene            complement(3578..4330)
                     /locus_tag="ACJE1S_001358"
     CDS             complement(3578..4330)
                     /locus_tag="ACJE1S_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG0806899.1"
                     /translation="MQEKAYKLLALQENISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKTKFSIVKTSKPKVIFEDENIIAINKPYAYISEELEKKFNAKLLNRLDKETSGVILL
                     CKNEDFRKICIEEFKKQRVYKSYIAVLDGILAEEIEIDEPILTIKTKNGALSKISKEG
                     LSAVSIFTPIMMQAKKTLAKIIIKTGRTHQIRVHAKFIKHGIIGDEKYAKISSDRMYL
                     HSHEIRILNYQFKVELDSSFSKLGFEIKNLDF"
     gene            complement(4311..5468)
                     /gene="waaA"
                     /locus_tag="ACJE1S_001359"
     CDS             complement(4311..5468)
                     /gene="waaA"
                     /locus_tag="ACJE1S_001359"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HGG0806900.1"
                     /translation="MIFLYYILVWIAFLLCAIPLFLLSLFKPKYKYSLKARFFLFRNI
                     SQKRSDVHFHVCSYGEARSVKELVLRFDSRITTITQTGYDYAKEICNKVNYLAFENWI
                     PFWLKPSKVLVIFEAEYWLMLVFIAKLQKSKVILLNARISDNSYASYKKFRFFYKKIF
                     CYIDEVFAQSEVDKIRLEDLGAKNVKIFSNIKSKLQIFPTQKYLKPKRKLIIFASTHK
                     GEEELLLKHYKMDKQEKLIIAPRHPERFLEVEQLLHDKGLKFDKFSLLQNEDKKFNQD
                     ILLLDCLGELVNFYAISDVVVLGGSFFEGIGGHNPIEVAHFNNVLISGIYIHNQKSLF
                     QEVDNVYFCEDLKELDGIIHNYNLKAKIAQNNDLSTIIQAIQESIDARKSI"
     gene            complement(5465..6181)
                     /locus_tag="ACJE1S_001360"
     CDS             complement(5465..6181)
                     /locus_tag="ACJE1S_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HGG0806901.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSFEPKMESISKTLKDAENKIAKFNV
                     ELNNLENEIQDVENQKVQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKELFKKELLEERAKEEQNLDEIRVSISSQMDGLEKERMNV
                     YTKKTKLVAEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVIKGE
                     EIITCPHCGRILYKEQEDQN"
     gene            complement(6191..6916)
                     /locus_tag="ACJE1S_001361"
     CDS             complement(6191..6916)
                     /locus_tag="ACJE1S_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HGG0806902.1"
                     /translation="MKLIEIYNFLDKLSPFETQEIWDNSGLLLGNFNDEIHNVYLSLD
                     IDEQLIQNAEENSLFITHHPLIFKGLKDLANSAYPRAFVKEMLRKNLSLISMHTNFDL
                     SHLNTYFIEEILGFEISSKNKFLAYIDVDMSFEELCIVVKKRLNLEILRTSFCGKEYL
                     KRLAVCTGSGGDLLNEVKADCYLSGDFKYHQALEAISNHLNLIDLGHFESERYFAQCL
                     AKHLKNLPLKVIITVSKNPFQYF"
     gene            complement(6903..7766)
                     /gene="glyQ"
                     /locus_tag="ACJE1S_001362"
     CDS             complement(6903..7766)
                     /gene="glyQ"
                     /locus_tag="ACJE1S_001362"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HGG0806903.1"
                     /translation="MTFSQMILNLQEFWQKQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWATAYVAPSRRPTDGRYGENPNRLGAYYQFQVLMKPSPDNIQELYLKSLENLGFD
                     LKSHDVRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKRSEYEFSKYNFEISNVDFLNQQFE
                     NTYKECKSILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKTCA
                     EIYKKNLDETD"
     gene            complement(7768..8322)
                     /locus_tag="ACJE1S_001363"
     CDS             complement(7768..8322)
                     /locus_tag="ACJE1S_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HGG0806904.1"
                     /translation="MQTYLELQEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAN
                     QGTFSVVPSASNSKPAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLDALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNHELKHAREEIEFLKRKYKLMWSKTAEIFGARTE
                     PDLEMKKDENSSTANEKLNENKEG"
     gene            complement(8335..8829)
                     /gene="purE"
                     /locus_tag="ACJE1S_001364"
     CDS             complement(8335..8829)
                     /gene="purE"
                     /locus_tag="ACJE1S_001364"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HGG0806905.1"
                     /translation="MKFVSIMMGSKSDYEIMSECAKTLEKFGVKYELIISSAHRSPKR
                     TQEYIKEAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMPGSALASMDSLFSTV
                     QMPGGIPVGTLAVGKAGAKNAAYLAMQILALNDETLAKALKQDRKNQEENLISDSKSV
                     EVLL"
     gene            complement(8826..10082)
                     /locus_tag="ACJE1S_001365"
     CDS             complement(8826..10082)
                     /locus_tag="ACJE1S_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HGG0806906.1"
                     /translation="MIIPEIVAPAGNFAKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIEYTHQRGKKVYVTLNGFHLGGQIESLKKHILKLKEMKPDAFIVASVGAM
                     ALVRELAPEIALHVSTQANVLNYLDARVYKNMGAKRVVIARELSLKDAKSLKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGVLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIMKEDCISAFKIEGRTKSEYYVALTTRTYKMAIQDVL
                     EGKFEASKYEKEIATLKNRGFTDGYLVSRPLEKADTQNHDTSIEEGTHQVHAIVEDGE
                     YFKCKGKVVLNKAYEILMPLGDEIETCDNKLGKIYKKEDKYFVEFKKLISKNNKEFNE
                     IHSGNENEIKMPNKISSFSFLRKEIG"
     gene            complement(10079..10783)
                     /locus_tag="ACJE1S_001366"
     CDS             complement(10079..10783)
                     /locus_tag="ACJE1S_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HGG0806907.1"
                     /translation="MTQEELDALMNGDVNFDEDAESNIKSETESHNIESEEGLMLEDV
                     KVSDYKPDPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSEN
                     LFSEIDKVLAKNIEIFSKLNEKFPNVVSFNEALQLNSKVKKTSQEIIDKLQCGQDEVM
                     MAMDAMQYQDIHRQKIERVINVMRALSRYMSSLFEGRIDDKKRVSSAVHIEGDSTTDI
                     VSNDDIEALIASLGQK"
     gene            10982..12412
                     /gene="glnA"
                     /locus_tag="ACJE1S_001367"
     CDS             10982..12412
                     /gene="glnA"
                     /locus_tag="ACJE1S_001367"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HGG0806908.1"
                     /translation="MGKFVNNVNEFFDFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     SEETFEVGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDKDFADSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYIVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKDGVNLFYDKEGYGGLSQTAINYIGGVLKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARVEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRYNAFLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         4012 a         2317 c         1597 g         4551 t
ORIGIN      
        1 ctaaatctgc aaaataataa ttttgcagat tattttttaa gttctttaat acgtgctgct
       61 ttaccgcgtc tatctctaag atagaacaat ctagcacgac gaacacgacc ttttcttaca
      121 acagtaatac tctctaaact ttcgctataa attggaaaaa ttctttctac gccaacatta
      181 ttagcaccca ttttgcgaac gataaaggtt tcatctacac cattacctct tctagctata
      241 caaattcctt caaaattttg aattctagtt ttatcgccct ctttgatgcg aattgcaagt
      301 cttaaagtat cgccagcacg aaattctgga acattttttc cctcaatttg ttttgcttca
      361 aattgttcta tgtatttatt tttcataaaa aattccttat tttttgcgtt catgctctaa
      421 aaataaatct ggacgaaaaa atttcgtttt gcaagacgct aaagtagttt ttaaagtcgc
      481 aattttagcg tgattaccct ttaaaaactc tgaaggagta taaaatttct taaaattttg
      541 ttcaaaaata aaaggttttg caaatgaagg agcttctaat aaatcatttt cgaaactttc
      601 ctcttccagg ctgcaagcat tacccaaaac tccattgata tttcttgcaa tagcatcaca
      661 aagagtaagc gctggaagtt ctccgcccgt taaaataaaa tctcctatgc taaacacttc
      721 attagcaaaa atttctatta ctctttcatc aatgccttca tatctcccac aaacaaaaac
      781 aatattttct ttcttgctta atctttttgc atctttttga ttgaaagttt ttccacttgg
      841 atttagaaaa ataaaataag gatctttttc actatctttg ataaatttta aagtgttata
      901 aagaggttta atttgcatta acaaaccagc tccaccgcca attttataat catctacttt
      961 atgataaata ttatctgtaa aatttcttgg gtttaaaaag tcgagttgaa aaagctcttt
     1021 ttgaattgct cgggcaagaa tagaatcttt aaaataaaat tcaagcaaat tgggaaataa
     1081 agaaacaaaa ctaaacttca tgaattttct aagattaaaa aaacatcttt ggtgcaaaaa
     1141 atagaatatt tttctatatc aattttattg acatatttat caatataggg aataaaaaaa
     1201 gttttagcat aagctttatc aattaactct tgatcgcttt gaatttcaaa taaataagaa
     1261 tctcctactt caagaatatc caccactttc cccaaccttc gctcatcatc gaatacttcg
     1321 cattttaaaa tatcaaaata aaaaaattca tcctttttca atatgcaagt ttgtcttgta
     1381 gcttcaatac tttgataaag aattagatta ataagctgtt ttgcagcttc aacattctca
     1441 taaccttcaa acaaaacaga agagttagct aaattgtagt gtttaatttt caactgactt
     1501 ttgccatttt cagtgaaaaa agaagctcct tttttaaatt gctggataaa gtcacttagg
     1561 ttgtaaagtt ttaaataccc tttaagtcca acagtttttc caagtttggc aacttgaata
     1621 aaatttcttt tactcaagtg ctttaaccgt tacacgataa ctcattgaat ctttgctttt
     1681 acaagctgag acaactgttt ttattgcatt gatcattttt ccatttttgc cgataagctt
     1741 accggtatca attttatcag cataaagtat aatttcagca aaattttcat caagctttat
     1801 tttttctgtt gcaattttat ccggataatc tgctatgagt ttagcgtatt ctcttaaaaa
     1861 attttctacc atgaaattta tttactagta atagaagcta ctttatcact aagttttgca
     1921 ccaacgcttt tccaataagc tagacgctca gagtcaaatt ttaccacttc aggctcaacc
     1981 ataggattat aatatccaat gctttctatc catccgccat cacgacgttt tctactatct
     2041 gttactacta tacgataaaa tggtctttta gttcttccca ttcttgtaag tctaattact
     2101 gtcatataca ctccttaaaa ataaaaattt tttaactata gatactatta aaagtattta
     2161 tagataaaaa atctaaaatt gtcttctagc ttgattcatc atttgcatta aactatccat
     2221 accctttttt cctgaaaatc tcttagcaag tttagcagca tttgcaaatt gttttaaaaa
     2281 gcgattaact tcaacttgag acaatccagc gccttctgct atacgacgct ttctagcatt
     2341 attaagtaaa tctggatttt ctctttcttt tggcgtcata gatgaaatca tggctttaat
     2401 atgtataatt tctttagaat tatccaaatc aagatctttt acacttgaag caacattaga
     2461 aagtccaggt atcattccta taatagactt catactaccc aattttttaa cactttccat
     2521 ttgagttaaa aaatcattga aattaaactc gccttttttg attttttgat ttaatttctt
     2581 agcctctttt tcatcgataa tggccgcagt tttttcagct aaagttgcca aatcgccttc
     2641 acccattata cgattaacta ttctttcagg aataaaaatt tctaaatccg ctatcttttc
     2701 acccacgcct acaaatctta aagggattcc aatttgcttc gtaataccta aagctatacc
     2761 ccctttggta tctgcatcaa atttagataa aataactcct gtaataccca aaagctcatt
     2821 gaaacttgag gctgttttaa caccatcttg tccactcata gcatcagcga catagaaaat
     2881 ttcatctgga tttaaaacat tttttaccgc ttttaattca ttcattaaag cctcatcaat
     2941 agccaatctt cctgcagtat cgactagcaa tacatctgcc atagaatttt ttgctttttc
     3001 taaagcttgt tgtgccactt taatcggatc tttttcattt tcgatataaa aaagatctaa
     3061 ctcattagct tcacaaagct gtttaagttg ctctactgca gccaaacgct gtaaatcaca
     3121 agcagctatt aaaacttttt tattgcgaag ttttagatag ttggcaagct taaccgtact
     3181 tgtggtttta cctccacctt gtagacccac cattaaaaca acagttggag gcttagtagc
     3241 aaaaacaaaa ccttgatttt ttccatcagc attcaaaata ttttctaaat tggttttaat
     3301 agcttctaaa aattgctttt gtcctatgcc atttttttta acatcttctt caataagcaa
     3361 aagcaaatct ttaaccactt tatggtgtac atctgctttt agtaaggctt tttttaaggt
     3421 atctaaagca tttttaagcg ctttttcatc atcaacaaaa cgaagtttat taatcgctga
     3481 tttaaaagat tcgctgacta attcaaacac tttattacct ttctattatt tttaaatttt
     3541 aagttgagta ttatacaaaa tcttttctta aatggcttta aaaatctaaa ttttttatct
     3601 caaaaccaag ctttgaaaag ctagaatcta attctacctt aaattgataa tttaaaattc
     3661 gaatttcatg actatgcaaa tacatcctat cacttgaaat tttagcatat ttttcatctc
     3721 ctataattcc atgcttgata aatttagcat gcactcttat ttgatgggtt ctgcctgttt
     3781 taatgataat tttagccaaa gtttttttag cttgcatcat aataggagta aaaatactga
     3841 ccgcgcttaa accctcttta gaaattttgc tcaaagctcc attcttagtt tttatggtta
     3901 atataggctc atcaatctca atttcttctg ctaaaattcc atccaaaaca gctatatagc
     3961 ttttataaac tctttgtttt ttaaactctt caatgcatat ttttcgaaaa tcttcatttt
     4021 tacaaagcag tataacacca ctagtttctt tatcaagacg gttaagtaac tttgcattga
     4081 attttttttc aagttcttca ctgatataag catagggttt atttatggct atgatatttt
     4141 catcttcaaa aattacttta ggcttgctag tttttacaat gctaaatttc gtcttatcac
     4201 tcatcaaagc tcttgctaca actacctttt taccatgaga aaaaacgcaa cccttatcta
     4261 tcaaatcttt tgcttcgcgg tttgaaatat tttcttgcaa agctaaaagt ttatatgctt
     4321 tttcttgcat caatactttc ctgtatagct tgtattatgg ttgataaatc attattttgt
     4381 gctatttttg cttttaaatt gtaattatga attataccat caagttcttt taagtcttca
     4441 caaaaataga cattatccac ttcttgaaat aaactttttt gattatgtat ataaatccca
     4501 cttatcaata cattattaaa atgagccacc tctatgggat tatgtcctcc tatcccctca
     4561 aaaaaagaac ctcccagtac aactacatct gaaatggcgt aaaaatttac aagctcaccc
     4621 aaacaatcta ataataaaat atcttgatta aattttttat cttcattttg caataaacta
     4681 aatttatcaa attttaaacc tttatcgtgc aataattgtt ccacttctaa aaaacgctca
     4741 ggatgccttg gagcgatgat taatttctct tgtttatcca ttttataatg cttgagtaaa
     4801 agttcttctt cacccttatg agtgcttgca aaaataatca attttcgctt aggtttaagg
     4861 tatttttgtg taggaaatat ttgcaatttg gatttaatat ttgaaaaaat tttaacattt
     4921 ttagcaccca aatcttctaa tcttatttta tccacctcac tttgtgcaaa aacttcatct
     4981 atataacaaa aaattttctt ataaaaaaat ctaaattttt tatagcttgc atatgaatta
     5041 tctgaaattc tagcatttag caaaataacc ttactttttt gaagctttgc tataaaaacg
     5101 agcattaacc aatactcggc ttcaaaaatc actaatacct tgctaggttt gagccaaaat
     5161 ggaatccaat tttcaaaagc aagataattt accttattgc aaatttcttt agcataatca
     5221 taacccgtct gtgtaatagt cgtaattctt gaatcaaatc ttaaaacaag ctctttgaca
     5281 cttcttgctt ctccatatga gcaaacatga aaatgcacat ccgatctttt ttgagatata
     5341 ttacgaaaga gaaaaaatct agcctttaag ctatatttat attttggctt aaataaagaa
     5401 agtaaaaaaa gtgggatagc gcagagtaaa aaagctatcc acactaaaat ataataaaga
     5461 aaaatcaatt ttgatcttct tgctctttat ataaaattct tccacaatga ggacaagtta
     5521 taatctcttc acccttaatc actgataaat aagttttatc ataaattttc ataaagcagc
     5581 cataacaagc ctgtttttta acgggaacta cggctgtatt tttagcccat tttctaatct
     5641 tttcataaaa gcttaaaact ttttgattca tctctgcaac taatttagtc tttttagtat
     5701 aaacattcat tctttctttc tccaagccat ccatttgaga actaatgctt actcttattt
     5761 catctaaatt ttgctcctct tttgctcttt cttccaaaag ttcttttttg aaaagctctt
     5821 tattttctaa aattttatcc aaacgaacaa tctcatcatt agccgcatca agctgctctt
     5881 tagcgatatc ttcttcgatt tttaaagcat ttgcttcttt ttctgtctta acagctccac
     5941 tctttttaga aagctctttg attttagctg aaaactctga aatatgagca ttattttgaa
     6001 ctttttgatt ttctacatct tgaatttcat tttctaaatt atttaattca acattaaatt
     6061 tagcaatctt attttcagca tcttttaaag tcttgctaat actttccatc ttcggttcaa
     6121 agctgtcaat ttcttgatct atttttgata aaagcactaa ttgttcgaga tatttattca
     6181 tttattttcc ttaaaaatat tgaaatggat tttttgaaac tgttattata acttttagcg
     6241 gcaaattttt caagtgtttt gctaaacatt gagcaaaata gcgttcgctc tcaaaatgtc
     6301 ctaaatcaat caaatttaga tgattgctta tggcttctaa ggcttgatgg tatttaaaat
     6361 cgccacttaa atagcaatct gccttaactt catttaacaa atctccccca ctccctgtgc
     6421 aaacagctaa gcgtttcaaa tattcttttc cacaaaaact tgttcttaga atttctaaat
     6481 ttaaacgctt tttaaccaca atacaaagct cttcaaagct catatctaca tctatataag
     6541 ctaaaaattt atttttagaa gaaatttcaa atcccaaaat ttcttctata aaataagtat
     6601 ttaaatggct aagatcaaaa ttagtatgca tagaaattaa agaaagattt tttctaagca
     6661 tttccttaac aaaagctcta ggataggctg aatttgccaa atccttcaag cctttaaaaa
     6721 ttaaaggatg atgcgtgata aataaggaat tttcttctgc attttggatc aactgctcat
     6781 ctatatcaag gcttagataa acattatgaa tttcatcgtt aaaattccca agtaaaagac
     6841 cgctattatc ccaaatttct tgagtttcaa aagggcttag cttgtctaaa aaattataaa
     6901 tttcaatcag tttcatctaa atttttctta taaatttcag cacaagtttt cgaaagctcg
     6961 cgaattttta gcatataatc ttgtctttgt gcaacagaaa tagcacccct tgcatcaagc
     7021 aagttaaaag tatgagctgc aagcatacaa taatcataag caggcaaagc caatccctgt
     7081 tctaaaatac ttttacattc tttataagta ttttcaaatt gctgatttaa aaaatctaca
     7141 ttgctgattt caaaattata tttactaaat tcatactcgc tgcgcttatg cacatctgcg
     7201 tatttaattt tttccccatt aaattcgctc caaacaatat cataaacatt atctacattt
     7261 tggagataca tagcaattct ttcaagccca taagtgattt cagcacttac caaatctact
     7321 gcgattccac caacttgttg aaaataggta aattgagtta cttccatacc atcaagccaa
     7381 acttcccaac caagacccca agcgccaaga cttggactct cccaattgtc ttcaacaaaa
     7441 cgcacatcat ggcttttaag atcaaaacct aaattttcaa ggctttttaa ataaagctct
     7501 tgaatattat caggacttgg cttcattagg acttgaaatt gataataagc cccaagacga
     7561 ttaggatttt ctccatatct tccatctgtt ggacgacgag aaggagccac ataagctgta
     7621 gcccaaggtt ttttacctag acttcttaaa aaagttgctg gatggaaagt tccagctcct
     7681 gctggcatat cgtaaggctg catgattgca caaccttgtt tttgccaaaa ctcttgtaaa
     7741 tttaatatca tctgagaaaa agtcatttta accttcttta ttttcattta atttttcatt
     7801 tgctgtacta gaattttcat cttttttcat ttccaaatca ggctcagttc ttgccccaaa
     7861 aatttcagct gtcttactcc acataagctt atatttacgt tttaaaaatt ctatttcttc
     7921 tcgggcgtgt tttaattcat gatttaaagt ttcaatagtt tttctatctt catcataaag
     7981 ctcttgcatt gaataaagcg catcttttaa aaatttattt tcatttttta aagcatcaag
     8041 agtttcatcc tttgcatcta aaaccttctc atgcaaattt aaaattgttc ctatagtctt
     8101 ttctacaaag ctttctcctg ccaaagtcat agaatttacc atagcaggct ttgagttaga
     8161 agcacttgga acaacgctaa aagttccttg gtttgcttcg atataaattt ttccctcttc
     8221 ttctttgaaa tttaaagcac catttgccat cattcccttt acaacatctt catttaaatg
     8281 cacaagttta caaaattctt ggagctctaa ataagtttgc attttcatcc ttttttacaa
     8341 taaaacttct acactcttag aatcactgat taagttttct tcttgatttt ttctatcttg
     8401 ctttaaagct tttgctaaag tttcatcatt aagagcaaga atttgcatag ctaaataagc
     8461 tgcattttta gctcctgctt tgccaactgc taaagttccc acaggaattc cacctggcat
     8521 ttgcacggtt gaaaataaag aatccatact cgctaaagca cttccaggca taggtactcc
     8581 caaaacaggt ttggttgtat aagctgcaac tgctcctgct aaatgcgctg ccatcccagc
     8641 agctgcgata aaaactttag ctcctttttc ttctgcttct ttaatatatt cctgagttcg
     8701 ctttggacta cggtgagcag aactgataat gagttcatat tttacaccaa atttttcaag
     8761 cgttttggca cattcgctca tgatttcata atcactcttg cttcccatca taattgatac
     8821 aaatttcatc caatttcctt tcttaaaaaa ctaaaactgc tgattttatt tggcattttg
     8881 atttcgtttt cgtttccgct atgaatttcg ttgaattctt tattgttttt agaaataagt
     8941 tttttaaatt ctacaaaata tttatcttct tttttataaa tcttacccaa tttattatca
     9001 caagtctcaa tttcatcacc taaaggcatt aaaatttcat aagctttgtt taaaacaacc
     9061 ttgcccttgc atttaaaata ctctccatcc tcaacgatag catgtacttg atgagtaccc
     9121 tcttctatgc tcgtatcgtg attttgtgta tctgcttttt ctaaagggcg tgagacaaga
     9181 taaccgtctg taaaaccgcg atttttaagc gtagcaattt ctttttcata cttacttgcc
     9241 tcaaatttac cttctaaaac atcttgtatg gccattttgt aagttctagt tgtaagtgca
     9301 acataatact cacttttagt acggccctct attttaaatg cgcttatgca atcttctttc
     9361 ataatttttt ctatgtaaga gcataaattt aagtctttag agttaaatac atgggtacca
     9421 ttttcatctt cttctaaacg aaaaagtact ccattttcag gattttttgc ataaagttcg
     9481 taattaaatc tacaatcatt agcacaagag ccacgattac tcattcttcc gctttgaacc
     9541 gagctgatca aacagcgacc cgagtaagca aaacacatcg atccatgcac aaaagcttct
     9601 agctcaatat cgcaattttc ttttaaactt ttagcatctt taagactcaa ctctcttgcg
     9661 ataactactc gttttgcacc catattttta taaactcttg cgtcaagata gtttaaaaca
     9721 ttagcttgag tagatacatg caaggctatt tcaggagcta actctcgaac caaagccatt
     9781 gcacccactg aagctactat aaaagcatcg ggtttcatct ctttaagctt taaaatatgt
     9841 ttttttaaag attctatttg tccacccaag tgaaaaccat ttaaagtaac ataaaccttt
     9901 ttgcctcttt ggtgggtata ctcaatagct tcttcaaaac tctcataatt aaattctcta
     9961 gcagtgcgag agcgcaaaga aaaattattt acccctgcgt aaactgcatc agctccataa
    10021 gctaaagcga tttttaattt tgcaaaattt cccgcaggag ctacaatctc tggaataatc
    10081 atttttgacc caaacttgct ataagcgctt ctatatcatc attgcttaca atatcagtag
    10141 tagaatcacc ttcaatatga actgcagaac tcactcgttt cttatcatca atcctacctt
    10201 caaacaaaga actcatatag cgactcaagg cacgcattac attgataacg cgctctattt
    10261 tttgacggtg aatatcttga tattgcatag catccattgc catcattact tcatcttgtc
    10321 cacattgcaa cttatcaata atttcttgac ttgttttttt cacttttgaa tttaactgca
    10381 aagcttcatt aaaactgaca acatttggaa atttctcatt tagttttgaa aatatttcaa
    10441 tatttttagc taatacttta tcaatctcac taaacaaatt ttcagaatct gcaaagaaat
    10501 tattgatact ttctagctta tccatcatct cagtagcttt taactcactg tctttagtaa
    10561 catcatcaag ttgatgaact accttatgtt cttgatttgg tggtggtggt ggccatacaa
    10621 cactaggatc tggtttataa tcagacacct ttacatcttc tagcattaat ccttcttcag
    10681 attctatatt gtgagactct gtttcgcttt taatgttaga ctctgcatcc tcatcaaaat
    10741 ttacatcacc attcatcaag gcgtcaagtt cttcttgagt catttttttc cttttttaaa
    10801 cctagatttt gttttagtac tacgattata atcaaattta tctaaaatga aaatataaat
    10861 ttaaattttc atagttttgt aagtaaattt caaaaaatga ttaaaaaaat atattaatta
    10921 aacctgaatt aaaaaaaata tgatacaatt ttcataaatt atcttaaaga aggagtaaaa
    10981 gatgggcaaa tttgttaaca atgttaatga attctttgat ttttgtaaac aaaacgaagt
    11041 tctttttgta gattttcgct ttactgatat gataggaact tggcatcata tcacctataa
    11101 tcttcatgca attagcgaag aaacttttga agtaggaatt ccatttgatg gtagttcaat
    11161 tcatggatgg caacctattg aaaaatcaga tatgatttta aaacctgatg cgcaaagtgc
    11221 atttttagat ccttttacag ctgatcctac tattatagtt ttttgcgatg tttatgacat
    11281 ttataaagga caaatgtatg aaaaatgtcc aagaagtata gcaaaaaaag caatggaaca
    11341 tcttaaaaat agtggcatag ctgatactgc ttattttggg cctgaaaatg aattttttgt
    11401 ttttgacagt gtaaaaattg tagatacaac tcattgttct aaatatgaag tggatacaga
    11461 agaaggagag tggaatgatg ataaagattt cgcagatagc tacaatacag gtcatcgtcc
    11521 acgaaacaaa ggcggatatt ttcctgttca acctatagat tctttggtag atattcgctc
    11581 tgaaatggtt caaactcttg aaaaagtagg acttaaaacc tttgttcacc atcacgaagt
    11641 tgcacaaggg caagcggaaa ttggagtaaa ttttggcaca cttgtggagg ctgcagataa
    11701 tgtacaaatc tacaaatata ttgtcaaaat ggtagctcat ttaaatggca aaactgcaac
    11761 ttttatgcca aagcctcttt atggtgacaa tggaaatggt atgcatgttc atatgagtct
    11821 atggaaagat ggtgtgaatt tattctatga caaagaaggt tatggaggac ttagccaaac
    11881 tgctattaat tacataggtg gggttttaaa aaatgctcgt tctgttgcag cttttactaa
    11941 tccaagctca aattcataca aaagaatagt tccaggtttt gaagctcctt gtattttaac
    12001 ttattcttgc caaaatagaa gtgcaagttg tcgcgtgcct tatggtatag gtaagaattc
    12061 agctcgtgtt gaaattcgtt tccctgatag caccgctaat ccttatctag cttttgttag
    12121 tcttttaatg gcaggacttg atggaatcaa aaacaaaacc attcctgtag gacctatgga
    12181 tgaaaactta tttgatctta ctttagatga aattcgtgaa aaaggcatag agcaactacc
    12241 acacactcta agaggaagtc ttgaagcttt aattcgttac aacgctttct taaaacctgt
    12301 aatgagcgat atttttatag atgattatca acatttgaaa tttgaaactc aagtttggcc
    12361 tgttgaagcg cgtccaactg catacgaatt taaaacttgc tattcttgct aaataaaaag
    12421 caaagcgtaa atttttaaac gctttgcttt atttattgat aaatttctta aatccat
//
LOCUS       DBBXOW010000052        12397 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.053, whole genome shotgun sequence.
ACCESSION   DBBXOW010000052 DBBXOW010000000
VERSION     DBBXOW010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12397
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.053"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..432
                     /locus_tag="ACJE1S_001368"
     CDS             <1..432
                     /locus_tag="ACJE1S_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806909.1"
                     /translation="NLKNNQEKKERVSNQNASFVTSFIDFSKKELEKMAKKEFKVPNA
                     NELMGQIIAFNEKNGTSFGEELANDFIGYWDAREWKRNGKRMSSVAGSLYIWLKYAKE
                     NELRKNQRFNRKKEANPSVVDSLMEYYGMKDENKDKLLGCF"
     gene            443..1090
                     /locus_tag="ACJE1S_001369"
     CDS             443..1090
                     /locus_tag="ACJE1S_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806910.1"
                     /translation="MQEKIQILMDLLEINKSQATDIVGRYLKSVKDIHAFLDFYFETL
                     ERENIVGTSYEKLRRVCKRAQIEFKKRFEDKEIFLEWLKNKYKNQACFRLHEGDFEYS
                     YFASCGNGKKIKINQKSIDILVCVNAFKQISYKNGEPLENNEFKEALLEFIFKNQDRI
                     GKNLNIPLSVKKIEKVLSLEEKREIEKIEETKLFNENKDRLEIFIKSKKAFKKIS"
     gene            1108..1488
                     /locus_tag="ACJE1S_001370"
     CDS             1108..1488
                     /locus_tag="ACJE1S_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806911.1"
                     /translation="MEKYFLKIDLKSNPVPYKRTTQRSKFVCRDYLKYLDFKKLLQIE
                     FRRQNDISCFQAFDKQKKYEFSLKIGFKNKKHGDADNIVKGVLDALFENDKNVLKGNY
                     EIVAFKKSFLELEISEYEFKEKVT"
     gene            1488..1874
                     /locus_tag="ACJE1S_001371"
     CDS             1488..1874
                     /locus_tag="ACJE1S_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HGG0806912.1"
                     /translation="MTRIMTNGKSITKEELVSKIENYFSEKTVLKETKESVIFAPKTK
                     VGLAVHLGISMQTLNEWEKDKDFGEIVANAKQRCEMDIVNHSLIGTYTPSVSMFLLKN
                     QHGYVDKQEVVSDNVQKIEIIRSEIK"
     gene            1871..3163
                     /locus_tag="ACJE1S_001372"
     CDS             1871..3163
                     /locus_tag="ACJE1S_001372"
                     /inference="COORDINATES: protein motif:HMM:NF015211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HGG0806913.1"
                     /translation="MKLKLDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVI
                     ENLLMGQNVLWVDTIQANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMR
                     SAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG
                     KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEDQIKELIEEVGGEDSEVVKQEIYGEF
                     IDSSSAELFALTEIENAMSKNSFSIEKMQGENIWGLDVARYGDDKSVLAKRKGFVIDE
                     IKKYSQLGTMELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSA
                     NSATSNEYLNKRAQMYFTFAKNLKHMEIIKDEELKKDMRMIEYEYSDKGLLKIVSKEQ
                     LKKNYGKSPDVSDAVALTFFEKLYNRNNTNEDWSYDGW"
     gene            3153..3425
                     /locus_tag="ACJE1S_001373"
     CDS             3153..3425
                     /locus_tag="ACJE1S_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002924542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806914.1"
                     /translation="MAGEFLMIYDAIDANKIKRLSKLSDEAIKSSLANEFLELVSGFN
                     NISKKKFKREFAEFLFDKGVNEKDVLKITNLSKTTVWRIMNENKKN"
     gene            3406..4923
                     /locus_tag="ACJE1S_001374"
     CDS             3406..4923
                     /locus_tag="ACJE1S_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806915.1"
                     /translation="MKTKRTNDERISFLTQLISESKNGYENYKPHFKELQDAYLLENK
                     IMQKLRKRNKSNIYIPKINSKVKYLITSLNEVYFNSERMADIETYINSDDTIIELWQN
                     AIDFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIYFDPNALNS
                     EDIGYIVNEIYLTYNQIYERQKLGFYKKIEIEKLFDEDDEYKKVKLYDIYERKSDDTW
                     VVSTLFESNLLRNEIDLKDGQPFIWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDE
                     INITRNLLIDAVRSHIMPKIIVPKSMGISREDIETLGKPIYTDDPKGIQILPPPNINS
                     SGINLQLLESELTEVTGISPQNNGAQTANNETATEISIKAQEGGRRSADYIRQYNETF
                     IEPLFDRFAMLVFKYGEDSFFNGFQREDIPSFRFKIQTGTGAMNKEVRRAGIQASMQV
                     FSQLYQMYMSIGDADSAYGIINASKELTKELLPILGVKNVNSLFAFENKQEMQQG"
     gene            4927..5130
                     /locus_tag="ACJE1S_001375"
     CDS             4927..5130
                     /locus_tag="ACJE1S_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806916.1"
                     /translation="MLNIEIKSDISKTKGGKNLIEFIKAKYSECFYIAKNNNEKEVRL
                     KALDTMAFLDIIINKIKDEEDGK"
     gene            5120..5776
                     /locus_tag="ACJE1S_001376"
     CDS             5120..5776
                     /locus_tag="ACJE1S_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806917.1"
                     /translation="MENDALKDLMQAISDEGDTGQATNNKDSAQVVENEPTNEPTQVV
                     DNEPDYKAMFETYKSENDSKLNALMSELETLKNPKKEPSEQELQRQQYLKELGLDGLD
                     EKLKRLEELDKKQRDKEEQDALIAKYAQVESELRKAYPDADLKAMAELATKLSGLGEG
                     NIDSWKTLLNLVGKSSNAKKAEDLSSANSNIKSSDFNDKLKKGEVSEIDLGKELLSLV
                     "
     gene            5787..6167
                     /locus_tag="ACJE1S_001377"
     CDS             5787..6167
                     /locus_tag="ACJE1S_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806918.1"
                     /translation="MDFITALKGGTGLGSSFADTLMKTSNFTPNLASSSGGFLNGLKN
                     SFSNFGDWLFKSSDTNKITNFDRLGNVLGGAGALYGAYNQQKMAQKNYELQKDAYNFN
                     KYLANEELNRRKNMENKLQNVWSN"
     gene            6432..7475
                     /locus_tag="ACJE1S_001378"
     CDS             6432..7475
                     /locus_tag="ACJE1S_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806919.1"
                     /translation="MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANE
                     FQQEQDLRKQQMEFNQAMQNNQLLQNEFNNALALRKFDLERQRQVQDNALNWAKYKED
                     KDYNQKYLDYLTGKNSNIVTNKTNNNSGFSIDANGNLSEPQTMRDVFSKESNGGDLYH
                     FAKTAKTQNINLNDIYGFGDTINQKLRNTPFSNSKNLKQEFADKLKAEINLALVNITS
                     GRMSNEDRHRLEELVKTDSFYFFDKYAKHDIEKAVEILYRVKNDALKKEYMDIWKTER
                     YLKDRDNIENYYNNMYKKLENEKAMIKDFINAGNILASQGQRVPLNKILSQQPQQQLN
                     QNFLQQNNMITFR"
     gene            7488..10799
                     /locus_tag="ACJE1S_001379"
     CDS             7488..10799
                     /locus_tag="ACJE1S_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806920.1"
                     /translation="MTIQIPQGAKTMQLFDMNIDIPEGKTYIDIDDNFLQNKYNQFMQ
                     NNQQQNNFNSQEELALDGKPMSMYQAPQVSQNEPQEQGVWSKINKGLEDFNNLIDPKR
                     MISEGFDYLSPRVTSGEEGARQKIEDATNQVSGGLLPRIFTSPSNEEQKQIFQIAYDE
                     IKKLGYEPFLEINNGDYKYIGVDKNGKEVDFTPSFRNTLASTKNELAFSVAGGYAGSL
                     AKTAGQTIGKKALNYFAPSAIGAGSGAVSDLHSQSNNTGIEASYMDYAKRFGSAAAED
                     ALAGAVVGSAIKGIGKTYKSVGDLISSAKTGARAGKDMIDGMAVKGGNLGNRFIDKIS
                     KTDIPVVGKFTDGGLQNAETIFNNLTKNVENKKQIDELIAKENPTYLENGKPTIEILK
                     NIVEQGLNKNNPQFIQDSAKRTSSILKNISNALQGVPTTQRREILLKSAQAYPEIGSF
                     LDDVLKADKDASISFLNIIKEQDEVFKNKTGLNGEFDVKAWQKDNSSYKKRINNEYAQ
                     AIKSIDELNNGSIRLSKEDLAKIEEFKNNNFLEQDIKTNISSFLEDTIDKDLSAEQIF
                     NLRSAINKQLATGNKTYNTKEAYRLVKDTLDETMIKNASDKELAKKILEDANKNYALK
                     ENFNNSYLGKIKDQETPEALAQRIANGARNINEDKDLKRAFEGMNEVERKANEKHAFN
                     ALLAKHRIEDIGYDFKNLAKDMDNVEFVSKDLKYAKEVVNVYAKIYQNNKDLIMTALA
                     SSGKKTNSSIATTIQGVFDRILISGVFARIHALVPFMKSAKEQALRNQILDALKLAKT
                     NKEVISNLKNIKIADKEQSRIFKDALDNYIKVDKEQNKILKDALIKEGVIKGDNFFMD
                     KADPSKAKSDYTAKFNVEKWINNVSGILKDEWVVNLKAMAKKHPEMFKNEADVFKVIK
                     EIKDNPTHFFKNYDDEVALIAKPLKDDKVGNIAIKKDSGKIIHINKTKGKDLERLNRR
                     NKAMLTGTPTPATTKGSTTNVEGDLLQHSFKNSTQTKPKTNLMDDIKENIKAKEVEKK
                     NKKSVKQKLDEKIQNDKKAREERIKKIKQVIARKQKIDKVRDKKNNREIAGKIGTYTL
                     KNLIKLKERSEDNKN"
     gene            10961..11206
                     /locus_tag="ACJE1S_001380"
     CDS             10961..11206
                     /locus_tag="ACJE1S_001380"
                     /inference="COORDINATES: protein motif:HMM:NF037112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806921.1"
                     /translation="MVWGEVIDKIKHKGYGLAHIIDKHPELDLKLISDIVDKGKLNNQ
                     NNIRYRIEYKNYIIGLSSEYKGNKRTFIITAFERYKG"
     gene            complement(11573..12370)
                     /locus_tag="ACJE1S_001381"
     CDS             complement(11573..12370)
                     /locus_tag="ACJE1S_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806922.1"
                     /translation="MLKKEFDEKIKSLGFTRQDFCNMTGLAYSSVSNWNDNNKPIPIW
                     VDTWLEKYEEEKTFSNVRGKITINKTTMENTRELLKQKYLMLNLRKPQDCLKLSYQYH
                     QVKVNTYFDYYENTFNLFLVLNYEKSYYFTPLNIDNLIVKNPYLNDVPKEILGQILDN
                     GSLKDFYDNMREHMIHDDVQKSNYEDYEFKNGLKSNKNNDKNPFLSHLRKTPMSENHL
                     NFLNAQFNISKYILQRIRAKGYTIVTTANFSERKSLTLILNESSIRL"
BASE COUNT         5149 a         1464 c         2213 g         3571 t
ORIGIN      
        1 aatttaaaaa ataatcaaga aaagaaagaa cgcgtttcta atcaaaacgc ctcttttgtg
       61 acgagcttta ttgattttag caaaaaggag ttagagaaaa tggcaaaaaa agagtttaaa
      121 gtcccaaatg ctaatgagct tatggggcaa ataatagctt ttaatgagaa aaatggtaca
      181 agctttggcg aagagttggc taatgatttt ataggttatt gggatgctag agagtggaaa
      241 agaaatggaa aaagaatgtc aagtgtggca ggaagtcttt atatttggct taaatatgct
      301 aaagaaaacg agctaagaaa aaatcagcgt tttaacagaa aaaaagaagc caatcctagt
      361 gtggttgata gcctgatgga gtattacgga atgaaagatg agaacaaaga caagctctta
      421 ggatgctttt aaggagtaaa aaatgcaaga aaaaatacaa attttaatgg acttattgga
      481 aattaataag tctcaagcaa ctgatattgt aggtagatat ctcaaaagcg ttaaggatat
      541 tcatgctttc ttagattttt atttcgaaac tttagaaaga gagaatatcg tagggacaag
      601 ctatgagaaa ttaagaagag tttgcaaaag ggctcaaatc gagtttaaaa agcgttttga
      661 agacaaagaa atttttttag aatggttaaa aaataaatat aaaaaccaag cttgctttag
      721 actacatgaa ggagattttg aatattcgta ttttgctagc tgcggaaatg gtaaaaagat
      781 taaaatcaac caaaaatcaa ttgatatctt agtttgcgta aatgctttta agcaaatctc
      841 ctataaaaat ggcgaaccat tagaaaataa tgaatttaaa gaagccctac ttgaatttat
      901 tttcaaaaat caagacagaa taggaaaaaa tttgaatatt cctttgtcgg ttaaaaaaat
      961 agagaaagtt ttaagcctag aagaaaaaag agaaatcgaa aagattgaag aaacaaaact
     1021 ttttaatgaa aacaaagata ggcttgaaat ttttataaaa agcaaaaaag cttttaaaaa
     1081 aataagctaa ttttaagaaa gcctgaaatg gaaaagtatt ttttaaaaat tgatttaaaa
     1141 agcaatcctg taccttataa aagaacgact caaagatcta aatttgtgtg cagggattat
     1201 cttaaatatt tagattttaa aaaactcttg caaattgagt ttagaagaca aaatgatatt
     1261 agctgttttc aagcctttga taagcaaaaa aaatatgagt tttctttaaa aataggattt
     1321 aaaaataaaa aacacggaga tgcggacaat atcgtaaaag gtgtattgga tgcactattt
     1381 gaaaatgaca agaatgtttt aaagggaaat tatgaaattg ttgcctttaa aaagtctttt
     1441 ttagagctag aaattagcga gtatgaattt aaagaaaagg tgacataatg actagaataa
     1501 tgactaatgg caaaagcatc acaaaagaag agcttgtatc aaagatagaa aactacttta
     1561 gtgaaaaaac tgttttaaaa gaaactaaag aaagtgttat ttttgcacct aaaacaaaag
     1621 tgggattagc cgtgcattta gggatttcaa tgcaaacttt aaatgagtgg gaaaaagata
     1681 aagattttgg cgaaatagta gcaaatgcaa aacaaaggtg tgaaatggat attgttaatc
     1741 attctttaat tggcacctat accccaagcg ttagcatgtt tttgctaaaa aatcagcacg
     1801 gttatgtaga caaacaagaa gtagtcagcg ataatgtaca aaaaatagaa attataagaa
     1861 gtgaaatcaa atgaaattaa agcttgactt ttcttacact cctgcacaac ttaaagtttt
     1921 tgatgataaa aatccacgct ttataaccgt agcaaaaggc agaagacttg gttttacaag
     1981 gggaagcgct aagtttgtca tagaaaactt gctaatggga caaaatgtat tatgggtgga
     2041 tactatacaa gcaaacttac aaaactatta cgagctatat tttacgcctg agctaaaaaa
     2101 cttacctaaa gatttttatt cttggagcgt gcaagataag aaattaatca ttaacggggc
     2161 ggtacttcat atgagaagtg ctgaaagaag cgaaaatatc gaaggttttg gttatgacct
     2221 tgttatctta aatgaagcag gtattatttt aaaaggcagc aaaggggaat atctttggta
     2281 taacgctata cgccctatgc tacttgataa tcccaaatca agggcgatta taggtggagt
     2341 acctaaagga aaaaatctat tttacgagct atgtagaaaa gaattgagtg acaaaaattg
     2401 gaaacacttt caattttcaa gctatgacaa ccctttttta aaagaagatc agattaaaga
     2461 acttattgaa gaagtgggtg gcgaagatag cgaagtagtc aaacaagaaa tatatggaga
     2521 gtttatagat agctcgagcg cagagctttt tgcattaact gaaattgaaa atgcgatgag
     2581 caagaactct tttagtattg aaaaaatgca aggtgagaat atttgggggc ttgatgtagc
     2641 aagatatgga gatgataaaa gtgttttagc aaaaagaaaa ggttttgtaa ttgatgagat
     2701 taaaaaatac tcacaacttg gaaccatgga gttagcaaat aaaatattag ctgaatacaa
     2761 tcaaagcgaa gacaaaccaa aaggtatttt catagatact tgcggtcttg gcgttggcgt
     2821 gtatgatgtc ttgttaaatt atggcttgcc cgtatttgag gcaaattctg caaattctgc
     2881 aactagcaat gaatacttaa ataaaagagc gcagatgtat ttcacctttg cgaaaaattt
     2941 aaaacacatg gagattatta aagatgaaga attaaaaaaa gatatgagaa tgattgaata
     3001 tgaatatagc gataaagggt tgttaaagat agtttcaaaa gaacaattaa aaaagaacta
     3061 cggcaaaagt cctgatgtta gcgatgctgt ggctctaact ttttttgaaa aattatataa
     3121 cagaaacaat actaatgaag attggagcta tgatggctgg tgaattttta atgatttatg
     3181 atgctattga tgcaaacaaa ataaaaaggc tttcaaaatt aagcgatgag gctataaagt
     3241 caagtcttgc aaatgaattt ttagagcttg tatcaggatt taataatatc tctaaaaaga
     3301 aatttaaaag agagtttgcg gagttcttat ttgataaagg ggtgaatgaa aaagatgttc
     3361 taaaaataac aaatttaagc aaaacaacag tatggagaat tatgaatgaa aacaaaaaga
     3421 actaatgatg agagaatatc gtttttaaca caactcatta gcgaaagtaa aaatggatat
     3481 gaaaattaca aaccacactt taaagaattg caagatgctt atttgcttga aaataaaatt
     3541 atgcaaaagc taagaaaaag aaataagtca aatatctata ttcctaaaat taactctaag
     3601 gtaaaatacc taatcactag cctaaacgaa gtttatttta atagcgaaag aatggcagat
     3661 attgaaacat atatcaatag cgatgatact attatagagc tttggcaaaa tgccatagat
     3721 ttttatagcg gtaaaatcaa tatgtttaaa atttttcagc cacttttttt agatgtttta
     3781 cttgtaggta ctagcatagc taaagttact tggcataaag gaatgccacg cattgaaagg
     3841 gtggatatag acagtattta ttttgaccca aatgcactaa atagcgaaga tataggctat
     3901 atagtcaatg aaatttatct aacttataat cagatctatg aaagacaaaa gctagggttt
     3961 tataaaaaaa tagaaattga aaagcttttt gatgaagatg atgaatataa aaaagtcaaa
     4021 ctttatgata tctacgaaag aaaaagtgat gatacttggg tggtttctac tctatttgaa
     4081 agtaatttgc taagaaatga aatcgattta aaagatggac aaccatttat ttggggttcc
     4141 atgcttccac agctcaagaa aatagataat gaaaactatg taagtgctta cggcgaacca
     4201 ataatggctt cagctatgcc tttgcaagat gaaattaaca tcacaagaaa tcttttaatc
     4261 gatgctgtaa gatctcatat tatgccaaaa ataatagtac caaaatcaat gggaataagc
     4321 agagaagata tagaaacctt aggaaagcct atatatacag atgaccccaa aggaattcaa
     4381 atactgcctc ctccaaatat aaatagttct ggaataaatt tgcaattatt agaaagtgag
     4441 ctaacagagg taacaggaat tagtccacaa aataatggcg cgcaaacagc aaataatgaa
     4501 acagcaacag aaataagcat aaaagcacaa gaaggcggta gaagaagtgc agattatatt
     4561 agacaatata acgaaacctt tatagagcct ttatttgata ggttcgcaat gcttgttttt
     4621 aagtatggag aagatagttt ttttaatggt tttcaaagag aggatattcc tagttttaga
     4681 tttaaaatcc aaacaggtac aggagccatg aataaagaag ttagaagggc gggaattcaa
     4741 gctagcatgc aagtattttc acaactatat caaatgtata tgagcatagg agatgcagat
     4801 tctgcttatg ggattatcaa tgctagcaaa gaacttacta aagaattatt accaatttta
     4861 ggagtaaaga atgtaaatag cctatttgct tttgagaata agcaagaaat gcaacaagga
     4921 taaacaatgc tcaatattga aataaaaagt gatatatcta aaaccaaagg aggaaagaat
     4981 ttaatcgaat ttataaaagc aaaatatagc gaatgttttt atatagctaa aaataacaac
     5041 gaaaaagaag tgaggttaaa agccttagat actatggctt ttttagacat aataatcaat
     5101 aaaataaagg atgaagaaga tggaaaatga tgctttaaaa gatttaatgc aagcaatatc
     5161 agatgaaggt gatacaggac aagctactaa caacaaagac tctgcgcaag tagtagaaaa
     5221 tgaacctacg aatgagccta cacaagtagt agacaacgaa cctgattata aagctatgtt
     5281 tgagacttat aaaagtgaga atgatagcaa actaaatgct ttaatgagtg agcttgaaac
     5341 tttaaaaaat ccaaagaaag aaccaagcga acaagaattg caaagacagc agtatttgaa
     5401 agagttggga cttgatgggc ttgatgaaaa actgaaaaga cttgaagagc ttgacaaaaa
     5461 gcaaagagat aaagaagaac aagatgcatt aatcgctaaa tatgcacaag tagaaagcga
     5521 attaagaaaa gcttaccctg atgctgattt aaaagctatg gcggaacttg ctacaaagtt
     5581 aagtggttta ggtgaaggca atatagatag ttggaaaacc ttacttaatt tggtcggaaa
     5641 atcaagtaat gctaaaaaag ctgaagattt atcaagcgca aatagcaata ttaaatctag
     5701 tgattttaac gataaattaa aaaaaggcga agttagcgaa atagatcttg gaaaagaatt
     5761 attaagttta gtataaagga gaaatcatgg attttataac agctttaaaa ggtggtacag
     5821 gactaggctc tagctttgca gatactttga tgaaaacaag caattttact ccaaatttag
     5881 caagtagcag tggtggtttt ttaaatggat taaaaaattc ttttagtaat tttggagatt
     5941 ggttatttaa aagtagcgat acaaacaaaa taactaattt tgatagatta ggaaatgttt
     6001 taggcggtgc cggcgcttta tatggtgctt acaatcagca aaagatggca caaaagaatt
     6061 atgagttaca aaaagatgct tataacttca ataagtatct agccaatgaa gagttaaaca
     6121 gaagaaagaa tatggaaaat aaacttcaaa atgtttggag taattaaata gatttggatt
     6181 taaggagttt gttttaaagg gtaaatctta accccttgta taaggggctt tgtttattga
     6241 ttgttaattt gcattgacaa caataataca aagtagtata ataactatta agatttgtag
     6301 catcttattt caccgccttt ctaggtggta atttagtgct aagggtggcg acccttggca
     6361 ccacaccttt taaaattata cacaaacttc cttaaatcct ttattttaaa agaaagaata
     6421 aaggaaacaa aatggcattt tataacccac aaagagtagt atttaatcct gatacaggcg
     6481 ttatacaaaa cgcaggaaaa gtcggtggtg tcttatatga catcatgagc aaaagttttg
     6541 atgataaagt taaagctaat gagtttcagc aagagcaaga tttaagaaag caacaaatgg
     6601 aatttaatca ggctatgcaa aataatcagc ttttgcaaaa tgaatttaat aatgctttag
     6661 ccttgcgaaa atttgacctt gaaagacaaa gacaagttca agataatgct ttaaattggg
     6721 ctaaatataa agaagataaa gattataatc aaaaatattt agattattta actggtaaaa
     6781 atagtaatat agttactaat aaaacaaata ataattcagg ctttagtata gatgctaatg
     6841 gtaatttaag cgaaccgcaa acaatgagag atgtttttag caaagaaagt aatggcgggg
     6901 atttgtatca ttttgcaaaa accgctaaaa cgcaaaatat aaatttaaat gatatttatg
     6961 gatttggaga taccataaat caaaaattaa gaaatactcc ttttagtaat agtaaaaact
     7021 taaaacaaga attcgcagat aagctaaaag ctgaaataaa tttagcacta gttaatatca
     7081 caagtggcag gatgagcaat gaagataggc atagattaga agaattggtt aaaacagata
     7141 gtttttactt ctttgataag tatgctaaac atgatattga aaaagcagta gaaatactat
     7201 atagagtaaa aaatgatgcc ttaaaaaaag aatatatgga tatttggaaa acagaaaggt
     7261 atttaaaaga tagagataat atagaaaatt attataacaa tatgtataaa aagctagaaa
     7321 atgaaaaggc tatgataaaa gattttataa atgctggaaa tattttagct tctcaagggc
     7381 aaagagtacc attaaataag attctatcac aacaaccgca acaacaatta aaccaaaatt
     7441 ttttacaaca aaacaatatg attacattta gataataagg ataaaagatg acaatacaaa
     7501 taccacaggg tgcaaaaaca atgcaacttt ttgatatgaa tatagatata ccagaaggaa
     7561 aaacttatat agatattgat gataattttt tgcagaataa atataatcaa tttatgcaaa
     7621 ataatcagca acaaaacaat tttaattcac aagaagaatt agctttagat ggtaagccta
     7681 tgagtatgta tcaagcacca caagtaagcc aaaatgagcc acaagaacaa ggagtatgga
     7741 gtaaaataaa taagggtcta gaagatttta ataaccttat agatccaaaa agaatgatat
     7801 ctgaaggatt tgattatctt tctccaagag ttacaagcgg tgaagaaggg gcaaggcaaa
     7861 aaatagaaga tgcaacaaat caggtatcag gtgggttgct acctagaatt tttactagcc
     7921 ctagcaatga agagcaaaaa caaatttttc aaatcgcata cgatgaaata aaaaaattag
     7981 gatatgagcc atttttagaa ataaataatg gagactataa atatataggc gttgataaaa
     8041 atggaaaaga agttgatttt actcctagtt ttagaaatac acttgctagt actaaaaatg
     8101 agttagcatt ttctgtagct ggtggatatg ctggaagctt agcaaaaaca gcagggcaaa
     8161 caataggtaa aaaagcctta aattatttcg caccatctgc aattggtgct ggtagcggtg
     8221 ctgtatctga tcttcattcg caaagtaata atacaggaat tgaagcaagt tatatggatt
     8281 atgctaaaag gtttggaagt gcagccgcag aagatgcctt agcaggtgct gtagttggat
     8341 cagctataaa gggaatagga aaaacatata aaagtgttgg tgatttaata agcagtgcaa
     8401 aaacaggagc aagggccggt aaagatatga tagatggcat ggcagtaaaa ggtggtaatt
     8461 taggcaatag atttatagat aaaataagca agacagatat acctgtggta ggaaaattta
     8521 cagatggtgg cttgcaaaat gcagaaacaa tttttaataa tcttacaaaa aatgtagaga
     8581 ataaaaaaca aatagatgaa cttatagcaa aagaaaatcc aacatactta gaaaatggaa
     8641 agcctacaat agaaatatta aaaaacattg tcgagcaagg acttaacaag aataatccac
     8701 aatttataca agatagcgct aaaagaacaa gttctatttt aaaaaatatt tcaaatgctt
     8761 tacaaggagt tccaactact caaagaagag aaatattatt aaaatcagct caagcttatc
     8821 ccgaaatagg aagtttttta gatgatgttt tgaaggctga taaggatgct agtatttctt
     8881 ttttaaatat aattaaagaa caagatgaag tatttaagaa caaaacaggt ttaaatggtg
     8941 agtttgatgt taaggcttgg caaaaagata atagctctta taaaaaaaga attaataatg
     9001 aatatgctca agctataaaa agtatagatg agcttaacaa cggctcaata aggttaagca
     9061 aagaagattt agcaaagatt gaagagttta aaaacaacaa ttttttagag caagatataa
     9121 aaacaaatat tagtagcttt ctagaagata ctattgataa agacttaagt gctgagcaaa
     9181 tatttaactt aagaagtgct ataaataagc aattagccac aggaaataag acatataata
     9241 ctaaagaagc ttataggcta gtaaaagata ctttagatga aactatgata aaaaatgcaa
     9301 gtgataaaga actagcaaag aagattttag aagatgctaa taaaaactat gcgttaaaag
     9361 aaaattttaa taatagttat ctaggaaaaa tcaaagacca agaaacaccc gaagcactcg
     9421 cgcaaagaat agctaatggt gctagaaata tcaatgaaga caaagattta aaaagagctt
     9481 ttgaaggtat gaatgaagta gagcgaaaag caaatgaaaa acatgctttt aatgcattac
     9541 tagcaaaaca tagaattgaa gatataggat atgattttaa gaacctagca aaagatatgg
     9601 ataatgtaga atttgtaagt aaagatttaa aatatgcaaa agaagtagta aatgtttatg
     9661 caaaaattta tcaaaacaat aaagacttaa taatgacggc tttagctagt agtggcaaaa
     9721 aaacaaattc ttcaatagcc acaacaatac agggtgtttt tgataggata ttaataagtg
     9781 gtgtttttgc tagaatacat gctttagttc cttttatgaa aagtgccaaa gaacaagcgt
     9841 taagaaatca aatactagat gcattaaaac ttgctaaaac caataaagaa gttatatcta
     9901 atcttaaaaa cataaaaata gcggataaag aacaaagtag aatttttaaa gatgctttag
     9961 ataattatat taaagtagat aaagaacaaa ataaaatatt aaaagatgca ctaataaaag
    10021 aaggtgttat caaaggcgac aacttcttca tggataaagc tgatccgagc aaagcaaaga
    10081 gtgattatac tgctaaattt aatgtagaaa aatggattaa taatgtttca ggaattttaa
    10141 aagatgaatg ggtggtaaat ttaaaagcta tggctaaaaa acaccctgaa atgtttaaaa
    10201 acgaagcaga tgtatttaag gtaattaaag agataaaaga caatcctact cattttttta
    10261 aaaactatga tgatgaagtg gcattaatag ctaaaccttt aaaagatgat aaggttggca
    10321 atatagccat aaaaaaagat agtggcaaaa ttatacatat taataaaaca aaaggtaagg
    10381 atttggaaag attaaatcgt agaaataaag caatgctgac aggtacgcca actcctgcaa
    10441 ccactaaagg cagtactacc aatgtggaag gcgatttatt acagcattct tttaaaaatt
    10501 ctacccaaac taaacctaaa acaaacttaa tggatgatat aaaagagaac attaaggcaa
    10561 aagaagtaga gaaaaagaat aaaaaaagcg taaagcaaaa acttgatgaa aaaatacaaa
    10621 atgataaaaa agctagagaa gaaagaatta agaaaataaa acaagttata gctagaaagc
    10681 aaaaaataga taaggttaga gataaaaaaa ataacaggga aatagcagga aaaataggca
    10741 cttatacgct aaaaaatctt attaaattaa aagaaaggag cgaagataat aaaaattaag
    10801 ggcttaaagt ccttgatttt tatctcgttc tttaaaagaa tttggaaaaa attatgcaga
    10861 atattattac gatggaaaag gtgctttaca aaaactactc attgaaaaac aaggacaggt
    10921 agctggggct tttcatagga aagatttagg agatattgat ttggtttggg gagaggtaat
    10981 agataagata aaacataaag gttatggttt agctcatatt atcgataagc atcctgagtt
    11041 ggacttgaaa ttaattagcg atattgtgga taaggggaaa ttaaataacc aaaacaacat
    11101 aagatataga atagaatata aaaattatat tataggttta agcagtgaat ataaaggaaa
    11161 taaaagaact tttataatta cagcttttga aagatacaaa ggataaaaac aacactttca
    11221 ccgattgttt ttttgcggtt agctcggaca atttactaac caacctttta tcaattatag
    11281 cataaattca tgtaattatt ttttaaaata taaaagataa ttggaaggga gataatagga
    11341 ttgtgactgc atataatttt tattaatatt atcgccccta gctcagccga tacgcactaa
    11401 agctaggctt aatactgaca ctttaagcgt gagtagtgtc aatggcgatt attaattata
    11461 gcatatttta ttttataaaa ggttttatag attttgaaat ttcatctaaa aatagatctt
    11521 ttaaactaat acgatatggt atataaactt tttccaaaaa attagaaaaa ggctaaagcc
    11581 ttatactgct ttcatttaaa atcaaagtaa gagattttct ttctgaaaaa tttgcagtag
    11641 ttactatagt atatcctttt gctcttattc tttgcaaaat atattttgaa atattaaatt
    11701 gagcatttaa gaaatttaaa tggttttctg acatgggcgt ttttcttaaa tgagataaaa
    11761 atggattttt atcattattt ttattagact ttaaaccatt tttaaattca taatcctcat
    11821 aattgctttt ttgaacatca tcatgtatca tatgttctct catattgtca taaaaatctt
    11881 ttagactgcc attatctaat atttgtccta atatttcttt tggaacatca tttaaatatg
    11941 gattttttac tattagatta tcaatattaa gtggtgtaaa ataataagat ttttcataat
    12001 ttaacacaag aaataaatta aaagtatttt cgtaatagtc aaaataagta ttaactttta
    12061 cttgatgata ttgataactt agctttaaac aatcttgagg ttttcttaaa tttaacatta
    12121 agtatttttg tttcaaaagt tctcttgtat tttccatcgt tgttttattt atagttattt
    12181 tgcctcttac attagaaaat gttttttctt cttcatattt ctcaagccaa gtatcaaccc
    12241 aaataggaat gggcttatta ttatcattcc aattgctaac gctactataa gctaagcctg
    12301 tcatattgca aaaatcttgt cttgtaaatc ccaaactttt aattttttca tcaaactctt
    12361 tttttaacat aattatcctc aaatttagtt gatataa
//
LOCUS       DBBXOW010000053        12231 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.054, whole genome shotgun sequence.
ACCESSION   DBBXOW010000053 DBBXOW010000000
VERSION     DBBXOW010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12231
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.054"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..770)
                     /locus_tag="ACJE1S_001382"
     CDS             complement(<1..770)
                     /locus_tag="ACJE1S_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0806923.1"
                     /translation="MLINQSFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFII
                     GGYGANANIYFLDSYRNYIAKNFDVVAVHVFYHCFCQRRSDVEKYSTLADFTKDDLKL
                     IEKVLRKYNIPCDQLANNTVVSHCEYLSEIMTELKMLNRLPYDFEERLSATFIPSRGE
                     YQNFGIMAAIDHINALKDLVKRFPKLADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVI
                     DNSGSAVPPLNYIIGRELEFKSKDTNGDMYMQGDHFFV"
     gene            831..2339
                     /locus_tag="ACJE1S_001383"
     CDS             831..2339
                     /locus_tag="ACJE1S_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HGG0806924.1"
                     /translation="MITHIYDFLEKSLIKFSEKTAFVEPFAKERKEITYKDFDLFSKK
                     LAGEILKTLGNDNPTQAPVLIILPKGIDCLISFFGVALSGNFYTLLDEKSPKERVEKV
                     IEVLKPKLFITSKDLNFNLDLPTLYTEDFESFNIDESLLKNAKEKHIDTNLLYVFFTS
                     GSTGIPKGVSIAHKSVIDYTFWVCETFKFDENEILANQAPFYFDNSILDIFSSVKSGA
                     TLHLLPNHLFAFPNKILECLEKEKVSAIFWVPSVLIYFANTNAVNASTLKNLKKVLFC
                     GEIMPNKQLNIWRKHLSDTLFANLYGPTEITDVCSFYIVDREFKDEELLPIGKACKNT
                     ELLVFDENMNFISPKQISVKGELFVRGTSLSLGYYNDKEKTKQAFIQNPLHDNYLDLL
                     YKTGDIVSYNEFGELLCYGRADNQIKYMGHRIELGEIESVINSHVNIKNSACIFKEDI
                     ICFYESEEEINFKDFLKDKLPSYMIPKNFIKLDKFKLNQNGKIDRKVLKELV"
     gene            2332..3057
                     /locus_tag="ACJE1S_001384"
     CDS             2332..3057
                     /locus_tag="ACJE1S_001384"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG0806925.1"
                     /translation="MFKKAFYKGFKLSNYYDNFGTIEEKILKQEFILQKYKNNNFFFF
                     NRVDNLLYYFINDLQNFNLKANYIKILTKTDKQLLQHNDFLKLNHFKEILNHKQMILK
                     KDEIKLKKFTFISKASHEDSKEIYSFFRKYFDPYLFYFSQKNLEEKIPNILVYKENQK
                     IRAALIYTQTLNANFLDFIAVDRNLKHKNVAFALLNHYFAANTQNKFFKLFVEEKNQK
                     AINFYKRAGFCFNHINLKFYRNF"
     gene            3057..3778
                     /locus_tag="ACJE1S_001385"
                     /pseudo
     CDS             3057..3778
                     /locus_tag="ACJE1S_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049948.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
     gene            3780..4007
                     /locus_tag="ACJE1S_001386"
     CDS             3780..4007
                     /locus_tag="ACJE1S_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG0806926.1"
                     /translation="MQEIKQFFINIERTDINESMENLVSEDFIDSIDIMALVAEIEKF
                     YKKPLKAEFITPENFESFENIKKMLETAMKD"
     gene            complement(4004..5073)
                     /locus_tag="ACJE1S_001387"
                     /pseudo
     CDS             complement(4004..5073)
                     /locus_tag="ACJE1S_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344699.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            5175..6098
                     /locus_tag="ACJE1S_001388"
     CDS             5175..6098
                     /locus_tag="ACJE1S_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="HGG0806927.1"
                     /translation="MNLKLNSHNIKAISIVLPKNPHTLEKELQKCNLNQKKYELLKQN
                     TGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSSLI
                     HKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDK
                     ITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETFPLKCFKEANDFIDMDKNL
                     TFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETL
                     KNYGDVTINKLAFDLANYEWRKGGHKTSFYG"
     gene            complement(6505..7716)
                     /locus_tag="ACJE1S_001389"
     CDS             complement(6505..7716)
                     /locus_tag="ACJE1S_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0806928.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDIKAIVFIV
                     GGFGANANISFLDFDREYIAKNFDVVVIHVFYHCFCARQSIDQKYNPKLIPNQDDLER
                     VNGILKNINLGHLSVNKDNFEQIIPLIEQKANEMKQAGLVDESQKIELSCDFIPPNGD
                     YQNYGIMAAIDHINALKDLVKRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVI
                     DNSGVCLPFLAHILGRDMNQGEFVFEGDNNRIYCFVQKYWTRNINSSYYFGDENYLIR
                     AVLNSNHLKIQASMNNNTIFISYHSMQDMGAPVQNKIELYKCYQELGYDATLYLVKDE
                     NDIDGRFIKSLEHGLRMTDKALFRKELPLMLEKLQGRKFDMSKNSITYPCKDKQFIFK
                     DKDDKFELEIV"
     gene            7795..8493
                     /gene="pseF"
                     /locus_tag="ACJE1S_001390"
     CDS             7795..8493
                     /gene="pseF"
                     /locus_tag="ACJE1S_001390"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070567 - cytidylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HGG0806929.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFMRDKNLSDDYASSTAAVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKNILKQAYEKFIQNESKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            8477..9301
                     /gene="pseG"
                     /locus_tag="ACJE1S_001391"
     CDS             8477..9301
                     /gene="pseG"
                     /locus_tag="ACJE1S_001391"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HGG0806930.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYDNVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            9298..9771
                     /gene="pseH"
                     /locus_tag="ACJE1S_001392"
     CDS             9298..9771
                     /gene="pseH"
                     /locus_tag="ACJE1S_001392"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HGG0806931.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDINQFMKTKYIDFEEHLRF
                     LKKLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPNLKGVGQILMNEIIK
                     YAFENLKVNTLKAYVFKDNRKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(9736..10482)
                     /locus_tag="ACJE1S_001393"
     CDS             complement(9736..10482)
                     /locus_tag="ACJE1S_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HGG0806932.1"
                     /translation="MLKTRIIPCVLLKNSQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGEQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(10483..11088)
                     /gene="hisH"
                     /locus_tag="ACJE1S_001394"
     CDS             complement(10483..11088)
                     /gene="hisH"
                     /locus_tag="ACJE1S_001394"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HGG0806933.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAKNFITQDPKDLQKADKLLLP
                     GVGSFKEAMKNLKELGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQDPLYQGIEDKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFIRL"
     gene            complement(11085..12221)
                     /gene="pseA"
                     /locus_tag="ACJE1S_001395"
     CDS             complement(11085..12221)
                     /gene="pseA"
                     /locus_tag="ACJE1S_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HGG0806934.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHSVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
BASE COUNT         4459 a         1963 c         1573 g         4236 t
ORIGIN      
        1 ctcacaaaaa aatgatcgcc ctgcatatac atatccccat tagtatcttt gcttttaaat
       61 tccaactctc taccaataat ataattaagc ggtggaacag ccgaacccga attatcaatc
      121 acgccatcca cataccaagg agctattttt gctatgagta aagataggta tcctccataa
      181 gacccccccc cataaatttt tggtaaatct gcaagttttg gaaagcgttt aaccaaatct
      241 tttaaagcat tgatatgatc aatagctgcc ataatgccaa aattttgata ttctccacgc
      301 gaaggaataa aagttgcact tagtctttct tcaaaatcat aaggcaatcg atttaacatt
      361 tttaattctg tcataatctc gctcaaatat tcacaatgac taactacagt attattggct
      421 aattgatcac atggaatatt gtatttacga agcacttttt ctattaattt taaatcatct
      481 tttgtaaaat ctgctaatgt tgaatacttt tcaacatccg aacgcctttg acaaaaacaa
      541 tgataaaaaa catgcactgc tacaacatca aaatttttag caatataatt tctataagaa
      601 tctaaaaaat atatatttgc attggctcca taacctccta ttataaaaac tatagcttta
      661 atctcttttt catcatcata acttatacgg tattcaagtt tgctagttct ttttatattt
      721 aattctacat catcacaaga atcgatttca aagctttggt ttatgagcat ataaaggcct
      781 tttttattaa tttatcgata ttatattaca aaaaattaaa aaggtaaatc atgataactc
      841 atatctatga ttttttagaa aaaagtttaa tcaaatttag cgaaaaaact gcttttgtag
      901 aaccctttgc caaagaaaga aaggaaatca cttacaaaga ctttgatctc ttttctaaaa
      961 aactagccgg tgaaatttta aaaactttag gaaatgataa tcctactcaa gctcctgttt
     1021 taatcatctt gcctaaaggg attgattgtt tgatttcatt ttttggagtg gcactcagtg
     1081 gaaattttta tacactttta gatgaaaaaa gtcctaaaga aagagtagaa aaagttatag
     1141 aagttttaaa acctaaactt tttatcactt caaaggattt aaattttaat ttagatttgc
     1201 ctacgcttta tacagaagac tttgaaagtt ttaatataga tgagagtttg ctaaaaaatg
     1261 ctaaagaaaa acatatagat actaatttac tctatgtttt ctttacaagt gggagcacag
     1321 gcattcctaa aggagtaagc atagcacata agagtgtgat tgattatact ttttgggtgt
     1381 gtgagacttt taaatttgat gagaatgaaa ttttagccaa tcaagcacca ttttattttg
     1441 acaatagcat tttagatatt ttttcaagtg taaaatcagg agcgacttta caccttttac
     1501 ctaatcatct ttttgctttt ccaaataaaa ttttagaatg cttagaaaaa gaaaaggtta
     1561 gtgctatatt ttgggtacct tcagtgctga tttattttgc aaatactaac gcggtaaatg
     1621 cttccactct aaagaattta aaaaaagtat tattttgcgg agaaatcatg cctaataaac
     1681 aattaaacat ttggcgcaaa catttatccg atacactttt tgccaatctt tatggcccta
     1741 cagaaatcac tgatgtgtgt tctttttata tagtagatcg tgaatttaaa gatgaagaac
     1801 ttttgcctat aggtaaagct tgtaaaaata cagagctttt agtttttgat gaaaatatga
     1861 atttcataag tcctaaacaa ataagtgtta aaggggagct tttcgtgcgt ggaacttctt
     1921 tgtctttagg gtattataat gacaaagaaa aaaccaaaca agcttttatt caaaatcctt
     1981 tacatgataa ttatttagat ttactctata aaacaggaga tatcgtttct tataatgaat
     2041 ttggagagct tttatgctac ggaagagcag ataatcagat aaaatatatg ggacatagaa
     2101 tagaacttgg agaaatagaa agcgtgataa attctcatgt gaatattaaa aacagtgctt
     2161 gtatttttaa agaagatatt atttgttttt atgaaagtga agaagaaatt aattttaaag
     2221 attttttgaa agataaatta ccttcttata tgatcccaaa aaattttatt aaactcgaca
     2281 aatttaagct taatcaaaat ggtaaaattg atagaaaggt tttaaaagaa cttgtttaaa
     2341 aaagcttttt ataaaggatt taagttaagt aattactatg acaattttgg tacaattgaa
     2401 gaaaaaattt taaaacagga atttatttta caaaaatata aaaacaataa ttttttcttt
     2461 tttaatcgtg tagataattt actatattat tttatcaatg atttacagaa ttttaattta
     2521 aaggctaatt atataaaaat cttaaccaaa accgataagc aacttttaca acataatgat
     2581 tttttaaaac tcaatcattt taaagaaata ctcaatcata aacaaatgat actcaaaaaa
     2641 gatgagataa aattaaaaaa atttaccttt atctctaaag cttcacatga agatagcaag
     2701 gaaatttata gcttttttag aaaatatttt gatccatatt tgttttattt ttcacaaaaa
     2761 aatcttgaag aaaaaatacc caatatactt gtttataaag agaatcaaaa aattcgcgct
     2821 gctttgatct acactcaaac tctcaatgct aattttttag attttatagc tgtagataga
     2881 aatttaaagc ataaaaatgt ggcttttgct ttactaaatc attattttgc agccaatact
     2941 caaaataaat tctttaaact ttttgtagaa gaaaaaaatc aaaaagccat taatttttat
     3001 aaaagggcgg gtttttgttt taatcatatt aatttaaaat tttataggaa tttctaatga
     3061 cttactcata tatttacatc ataggcacag gcaaagtagc caaagaatgc caaaaaatag
     3121 ctaatgattt tttcagacaa gaagtaaatt ttgtaaaaaa tatagaaaat ttagatgatt
     3181 tctttaaaaa tcttaaaaat tgccttatta ttagtgctaa taatttttat attttcaaaa
     3241 aagaatgtat tcaaaaaaat actattatta attaccacaa cgcattatta ccttttcaca
     3301 gaggatgcaa tgcacatatt tggagtatat gggaaaacga taaaaaaaac aggtattact
     3361 tggcatatgg ttaaagaaag tatagataca ggtgatattt tagttcaaaa agaaataaaa
     3421 cttgataata attgtactgc tttaagtctt ttaaacgctc aacacaaact tgctctaact
     3481 ttatttagag aagctttaga aattttaaaa aataaagctt ttaaaatgca aatttcaggg
     3541 gggggggtat cacaaaaaat tatctttacc aaataatggt tatttagatc ttacttgaaa
     3601 taaagaaaaa atttctcgct ttttaagagc tatggactgc ggtgccttaa gcggagttcc
     3661 taaagctaga ttagaaatat taggtgaaga aagagaaatt ttattttatg aaatcaatga
     3721 gcttgattta attttaaatt taagcgataa tgtcatttta aaaatcacaa aggaataaaa
     3781 tgcaagaaat caaacaattt tttatcaata tagaaagaac agatatcaat gagagtatgg
     3841 aaaatctagt aagtgaagat tttatcgata gtatcgatat catggctttg gttgccgaaa
     3901 tagaaaaatt ttataaaaaa cccttaaaag cagaatttat cacacctgaa aattttgaaa
     3961 gctttgaaaa tatcaaaaaa atgcttgaaa ctgcaatgaa agactaatct ttccttgcaa
     4021 gttcaagctg ttcttttaaa gaactgatga tttcattttt agaaacaata atttgtgcta
     4081 taaaatccgc cacatcatcc caatctttac ttagcatatg ggttaaagta taattttgtt
     4141 catattcttc ccaattcaca ggagtaaaaa gagaattttt atgcgagaaa tatttgtttt
     4201 ttacccattc aagtgaagaa gcaaaataat ccacataagc tttagcaata tctttttgca
     4261 ctgcaaattt taatcttttt tctttgctgc cttcaaattt tcttcttgcc ataaaaagca
     4321 aagaattaag attatcctgc tttaaatctt tttgatttaa tcttgacata agctccattc
     4381 ctaaaagatt aaaactttca tttttggttt gttttaaaac aaaactctca tcccattcaa
     4441 gtcttaaatg ataaacaaaa tccttaagta aagtccctcc tacataatcc tcccttagaa
     4501 gtcttactat caaattttct tctccaaata cctcagcatg agttttgcaa atccattcat
     4561 agtcaaaaat atattttcta ggatgatctt gcggagcaaa atcagcagaa taatactcca
     4621 tattgttttt atgatcttga gagcaatgtg agtttaaata acccaaagta tctctaaaat
     4681 acacaataat ataaatttga gtaaaaccta actctctcat aatcttttct aaaatttcta
     4741 catgtttttt ggtagaaaaa tcccaaacta taccctcagc tgaaaaaata aatttttatc
     4801 tttatgtaaa gcactttcgc ttttaaaatt ttctatagct ctaagaagtc tttcatttgt
     4861 gatatgactt aaaatactct ctttttgcaa aatatcttct ttttgaacta gttctaaaac
     4921 catatctacc aaagcccaat gcctatttgc cactctaagg ctttttggat aaatatagcc
     4981 tttttttaaa agcctttctt cgttttgcat caagaagcct tgtttttctt gatttcctgt
     5041 attagtagtt cctatatgta aatatgctgt cattttatat cctttcttta caaaaaatta
     5101 tactccgttt gtgcttaaaa ttttaagcat tcataagtta caatttatct attaaatact
     5161 agaaagaagt aaaaatgaat ttaaaattaa actcacacaa tattaaggct attagtatag
     5221 ttttacccaa aaatccacat accttagaaa aagaattaca aaaatgcaat ttaaaccaga
     5281 aaaaatacga acttttaaag caaaataccg gtataaatca tcatttcata agccctaata
     5341 atatctatgc aagtgattta gcaagcaaag cactagaaaa gctttttaga gaaaatttgc
     5401 ttttaaaaga tgagcttgat gtacttttag tttatagttt ttcaccagat tttctagccc
     5461 ctgcactttc aagtttaatc cataaaaatc ttggtttaag tgaaaaaact ctgtgttttg
     5521 ataatattgc tttttgccca ggatttttac aaggcctaat gcaagctttt tctttactag
     5581 ataatgaaaa tatcaaaaaa atagctttca tttgcgtaag tgtaaaaagt aaaaaaatac
     5641 ccaaaaaaga taaaatcacc taccttagta atagcgacag tgctagtgtt attttgcttg
     5701 aaaaatctaa tacaaaagaa aaagcttttt tctcgcaaaa aatcttttcc aaattagcca
     5761 cagaagaaac ttttcctcta aaatgcttta aagaagcaaa tgattttatc gatatggaca
     5821 aaaatctcac attttctcac ttaaatgaaa attttcctcg attttttgat gatttttttg
     5881 ataattttaa acttgataaa agcaaaatag gcgaattttt ctttggaagt gcaaataatt
     5941 ttataaaaac taaattatta gaactcttaa atttcaaaga aattaaaaat gatgaaactt
     6001 taaaaaatta tggcgatgtt acgataaata aattagcctt tgatttggca aactatgaat
     6061 ggaggaaggg ggggcataaa acaagttttt atggctagtt ttggcacagg aattaccttt
     6121 aatgccatga gtttgaaaat tgattttagc aaaattaaaa actttatcga aattattgat
     6181 tttaatactt gaaaaaatat actatgtttc aagcgtagat tttatttaag cataggctaa
     6241 aacaatgcgg tggaaaaatt agagttattt atcaactcaa gcaactcatt tgccatcttc
     6301 aacagaaaat tattttaaag tctttttcta ttattggtag cacctttttc accaagagaa
     6361 attaaccact taaacaaatc attatacaaa aatatttcac tttttttaaa aaaatcataa
     6421 atttaatttt tatattaggc aaggaaatat ccatctacaa agcccctccc tagcaatcct
     6481 ttcttaactt tactaacgat aatcttaaac aatttcaagc tcaaatttat catctttatc
     6541 tttaaaaata aattgcttgt ctttgcaagg ataagtgata gaatttttac tcatatcaaa
     6601 ttttcttcct tgtagttttt caagcatcaa aggaagttct tttctaaata aagctttatc
     6661 agtcattcta agaccgtgct ctagactttt tataaatcta ccatctatat cattttcatc
     6721 ttttaccaaa tacaaagtcg catcatatcc taattcctga taacacttat aaagttctat
     6781 tttattttgc actggagcgc ccatatcttg catgctgtga tagcttataa agatagtatt
     6841 attgttcata cttgcttgaa ttttgagatg atttgagttt aaaacagctc taattaaata
     6901 attttcatca ccaaaataat aagaagaatt tatatttcta gtccaatatt tttgcacaaa
     6961 acaataaatt ctattattat ctccttcaaa aacaaattct ccttgattca tatctcttcc
     7021 caaaatatgt gctaaaaatg gcaagcaaac tcccgaatta tcaatcacgc catccacata
     7081 ccaaggagct atctttgcta tgagtaaaga taggtatcct ccataagacc cccccccata
     7141 aatttttggt aaatctgcaa attctggaaa acgtttaact aaatctttta aagcattgat
     7201 atgatcaata gctgccataa tgccatagtt ttgataatct ccattaggtg ggataaaatc
     7261 acaagaaagt tctatttttt ggctttcatc aaccaaacct gcttgtttca tttcattagc
     7321 tttttgctct ataagaggaa taatttgttc aaaattatct ttattaaccg ataaatgtcc
     7381 taaattaata ttttttaaaa taccatttac acgctctaaa tcatcttgat tgggaataag
     7441 ctttggatta tacttttgat caatactttg tcttgcacaa aaacaatgat aaaaaacatg
     7501 tatcactaca acatcaaaat ttttagcaat atattcccta tcaaaatcta aaaaagaaat
     7561 atttgcatta gctccaaaac cacccactat aaaaactatg gctttaatat ctttttcatc
     7621 atcataactt atgcgatatt caagcttact ggttctttta atacctagtt ctacatcatc
     7681 acaagaatcg atttcaaagg tttggtttat aagcaatttt aagcctttta ttgtatttta
     7741 aagacaatta tacttaaatt ttagtaaaat aaaacacaaa aacaaggctt aactatgaaa
     7801 aatctttgca taatccctgc tcgtggtgga tcaaaaagaa ttcctagaaa aaatatcatt
     7861 gattttctag gtaaaccttt aatcgcttat agcatagaaa atgctttaaa ttcaggtatt
     7921 tttgatgaag tggtgctttc aagtgatgat gaagaaatca tagaagtagc cttaaaatac
     7981 ggtgcaaaag ctccatttat gcgtgataaa aatttaagcg atgattatgc ttcaagcact
     8041 gctgcagtgc aaaatgccat agaaatttta caaagccaaa atcaaattta tgatcatgtc
     8101 tgttgtcttt atgctactgc tccgctttta aataaaaaca ttttaaaaca agcttatgaa
     8161 aaatttatac aaaatgaaag caagttttta tttgctgcta ctgagtttga gtatcctata
     8221 caaagggcat tttatctaaa tgaaaacaat caagtttata tgtttgatga aaaacattat
     8281 aaaagtcgtt cacaagatct aacaaaagct tatcatgatg caggagcttt ttattttggt
     8341 acaagcaaag cttggcttga ggaagatttt atatttaaac ctcattctag cgtgtttgta
     8401 ttgccaagaa atttagtttg cgatatagac accatacaag atttggaatt tgcaaaaata
     8461 ctttataagg taaatcatga aagtgctttt tagaagcgat agctccagtc aaataggctt
     8521 tggacacatt aaacgcgatc tagtcttagc taaacaatat gataatgtaa gttttgcttg
     8581 cttgccttta gaaggctcct tgatcgatga aattccttat cctgtttatg agcttagtag
     8641 cgaaagtatc tacgagctta tcaatctcat caaagaagaa aaatttgaac ttcttatcat
     8701 tgatcactat ggcatcagcg tagatgatga aaaactgatc aagcttgaaa caggggtgaa
     8761 aattctaagc tttgatgatg aaataaagcc tcatcattgt gatattttac tcaatgtcaa
     8821 tgcctatgca aaagcaagtg attatgaagg tttagtgcct tttaaatgcg aagtaagatg
     8881 tggtttttct tatgctttaa tcagggaaga attttatcaa gaggccaaag aaaatagaga
     8941 aaaaaaatat gattttttca tttgcatggg tggaactgat ataaaaaacc tttctttaca
     9001 aattgctagc gaattaccta aaacaaaaat catcagcatt gcaaccagct cttctaatcc
     9061 taatcttaaa aaattgcaaa aatttgcaaa attacataac aatattagat tatttatcga
     9121 tcatgaaaat attgcaaaat tgatgaatga aagcaataaa ctcatcatta gtgcaagttc
     9181 tttagtcaat gaagccttgc ttttaaaggc aaatttcaaa gctatttgtt atgttaaaaa
     9241 tcaagaatct acagcaactt ggcttgctaa aaaagggtat gaagtggagt ataagtattg
     9301 ataaaactta aaaatttcac agaacttaat tctcaagaaa tagagctgat ttttaaatgg
     9361 cgcaatcacc ccgatatcaa tcaatttatg aaaacaaaat atattgattt tgaagaacat
     9421 ttaagatttt taaaaaaatt acatcaagat tctagcaaaa aatatttttt agtttttcaa
     9481 gatgaacaga ttatcggcgt aattgatttt gtcaatatca caactaaatc ttgcgaattt
     9541 ggactttacg caaaacctaa tttaaaaggc gtaggacaaa ttttaatgaa tgaaattata
     9601 aaatacgctt ttgaaaactt aaaagtaaat actcttaaag cttatgtttt caaagacaat
     9661 cgcaaagctt taaaattata tcaacaaaat cattttacta tttatgatga agataaagat
     9721 ttttaccata tttgcctaaa gcaatctgac tgcaaagcct tgcctagcta attcttcttt
     9781 tacatcttta ggggtatact tagaaaaatg aaaaatataa gcacccgcta aagcatcagc
     9841 acctaaattt aaagcctcga ctccatcact tggattgcta agtcctccat tgataataag
     9901 aggaatttta agtttatttt gaaagatctt taaaagttct aaatcataac cctttgccct
     9961 tccttcaaaa tccacagaag ttaaaagaag ctctccagct cctttttttt catattctaa
    10021 agcaagttct aaaggacttt tttcaagtaa atttccccta tcataaacac aaaattgctc
    10081 tccttttctt ttaacatcta tagaacaaac tatacattga gaaccaaaac gattagccgc
    10141 tttacttata aaatccatat cttctaaggc cttagaattg atagaaattt tatccgcacc
    10201 taaatttaaa atcttttgta tatcttcaag ggtttttatc ccgccaccta tagttaaagg
    10261 cataaaacat tctttagcaa gatcttctat actttcaaaa tctatttctc cactttttga
    10321 agcatctata tctaagataa taagctcatc aacattgcgt gcattataaa ttctcattgt
    10381 tgaagttaaa tgccctatag tgcgaaaatc tttaaattct atacttttaa caagttgaga
    10441 atttttaagc aaaacacaag gaattattct agtttttaac atttaaagcc ttataaaatt
    10501 ttctaaaagt tttaagccta aattttgact tttttcagga tgaaactgcg tcgcaaaaat
    10561 atgatctttt tgcaaagatg cgacaaattt atgcccatat tgtgctttag cacttacaaa
    10621 ctcatctttg catttcacat aaaaagaatg cacaaaataa aaatcactct tatcttctat
    10681 gccttgatac aaaggatctt gttttaaaat ttcaagctca ttccaaccca tgtgtgggat
    10741 ttttaaattt aaatcctctt caaatttgac tacttcacct tctataaaac caagtccttc
    10801 gcaaactcca ccttcatagc ccctttctaa aaaaagctgc attcctaaac aaatgcctaa
    10861 aataggtttt ttttgtacta aaacttgctc ttttaaagct tctataaaac caagttcttt
    10921 taaatttttc atcgcttctt taaaagatcc cactccaggt aaaagcaatt tatctgcttt
    10981 ttgcaaatct tttggatctt gagttataaa atttttagct cctattttct caaaagcctt
    11041 tgcaacagag tttaaatttc ccgccttgta atcaatgagc gctatcattt taaaacacac
    11101 tcgtcttttc ttaccaaaga accatcataa tctcttataa atttaccatt ttcatcacgt
    11161 ttaaaaattt ttttattggt aaaagaatct actatttttt gaaattcttc ctcgctaaaa
    11221 ccactgaatt caaggtattt tttaatagcc tttttagggg gcttgccatc gtatttttgt
    11281 accaaacgca ccccttcttc acggctgata taacctaaac gaatatccaa acaagcatta
    11341 tccgttgctc taccaaagcc gtatttgcag tattttaaat aatcatgcac atgattagaa
    11401 taacaatcta aattttcaaa attttcataa gtagtctcaa cagaatgatc tagagttaaa
    11461 aaaccatatt ttttagaaat ttcaagaatt tttttataat cccatttaaa ataataccct
    11521 aaaaatagcc ccgtaacccc tactctttga agttcttcat cacttggata agtatataaa
    11581 aacaaatctt tttcagtgat accatttacc ccaagcatat cagaagcacg atttcctaaa
    11641 agcccgccaa attcttcaag ccactctctg cctaaaatat ttttattttt actactcgca
    11701 ggaccgccat actctatctg tggactttct ccccagatga tcaaaggcac tccaaaattt
    11761 accgctatgc gtggaacaga agtaaaaatt cccaaatggt tttgccactc attatcccct
    11821 gttcttataa aagcttcacg ggcaagtttt tgataaactt ttggatcacg cttgatatgg
    11881 atcaaatcca cgccaagatg atttaaattg tctaaatttt tgcgccctat tttcgtaggc
    11941 acactaggct caaaacacac acacaaagga ttaagtccaa gttcaagcat tttaaccact
    12001 tgaaaagtag aatcttttcc gccacttact ccgataacac aatcataaac aggatgtttt
    12061 ttgtattttt ttataagctc aaaaaattct ttttctcttt cttgccaatt aatattttga
    12121 tttttaactt cttgagaacg acaagcatca caaacacctt cttcatcaaa atgtaaatca
    12181 ggcttagtat ctggcatcac acatttttta caaaatttca taaatttcct t
//
LOCUS       DBBXOW010000054        12222 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.055, whole genome shotgun sequence.
ACCESSION   DBBXOW010000054 DBBXOW010000000
VERSION     DBBXOW010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12222
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.055"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            89..784
                     /gene="dsbI"
                     /locus_tag="ACJE1S_001396"
     CDS             89..784
                     /gene="dsbI"
                     /locus_tag="ACJE1S_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HGG0806935.1"
                     /translation="MKNLYWFVYFSKWQDMRNPWFIMSIIMISLVLIAHFLFQEYLYM
                     RPCEQCVYIRLDMLIIALGGIIALINPKNTIIKILAYTLAFYGIWLGLEHSLNLNRIH
                     EAISTENPFSGVNGCRDIPLYPFNLPLHERFPSWFKPVGQCGMDFPMVPKSAYLNAFQ
                     EFFVGKNGIYNNGWYLIPSLKFMNMATCCFIAFLCSFILLFIMFVSYVFSQRKIVFTI
                     ITISLVVALKILG"
     gene            873..1511
                     /locus_tag="ACJE1S_001397"
     CDS             873..1511
                     /locus_tag="ACJE1S_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG0806936.1"
                     /translation="MFKKMTKILTSLSLVCTFAMADDFITLSETLPDSKNSVVEAFSY
                     KCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEYANELNELFAFAQFKDEQNGK
                     DASYSDSLSHKLADVYFVVYFINKQDNFSSSDEFYDIGLKAMNVDKNEVLNFLSTPKA
                     KEILNEFKRANDIARTYGTPAFVVNGKYQINPSAISSMQALEDIVKKLSNMP"
     gene            1636..1776
                     /locus_tag="ACJE1S_001398"
     CDS             1636..1776
                     /locus_tag="ACJE1S_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806937.1"
                     /translation="MKNLSVQEKKDLDNCVFKTLGKKEPSALVLLFKKILLKLKTFFY
                     SK"
     gene            complement(1764..2396)
                     /locus_tag="ACJE1S_001399"
     CDS             complement(1764..2396)
                     /locus_tag="ACJE1S_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806938.1"
                     /translation="MKKVFPILISLCSLSLANVYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFLQDDKNCLELLIEAGRVRILKSYNECQKLSKDADFQKFLNEDFLRLYKNNGYSINE
                     NLQDLKKAMQDIMIYYKLRFAFSKNIQDMSKNKNLSILNIDEKEGGTLLYKINNQACV
                     AIELVRHNSRMAMKVYGMENLDKECKLFIQAPSFKNISFTKNDFKWYYLE"
     gene            complement(2393..2635)
                     /locus_tag="ACJE1S_001400"
     CDS             complement(2393..2635)
                     /locus_tag="ACJE1S_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806939.1"
                     /translation="MPQTHNKNLKNELEDLRYELSIVLEAMLLYAGVKREKLESAIEA
                     YIDNIDSVLENSNKEGVDEVLEVVEFLKNQHSELFQ"
     gene            complement(2616..3668)
                     /locus_tag="ACJE1S_001401"
     CDS             complement(2616..3668)
                     /locus_tag="ACJE1S_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HGG0806940.1"
                     /translation="MKIYHLSHTDLDGYACQYIVNFYYKNVNFYNSNYGKEINENFNA
                     ILADIEKDNSFGQAIILITDLNLNLNQCEEFDKICKEKNIKIFLLDHHQSGEECAQKY
                     AWYLLDNQRCATKITYDFFSKICKPDLELLNFAQVVNAVDIWLSEDANFELGKVFLGL
                     IANAKEINRVMFKEAQVFYMFFLLERARKFINQPNSHILLDNAIHFIKKDFFAKNHDD
                     TLSNLISYFVVEKLSELKEEFSIEYEGHKGILTSNIGNTSIIGNEFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKKLVGGGGHKNASGGLFAAYKDGANYNYIKAQIVDLI
                     KSKELKKGNSDATNTQ"
     gene            complement(3677..5854)
                     /gene="flhA"
                     /locus_tag="ACJE1S_001402"
     CDS             complement(3677..5854)
                     /gene="flhA"
                     /locus_tag="ACJE1S_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HGG0806941.1"
                     /translation="MAKNKLVDLVFPFLGPLIGPVLRAKSLTIVGFIVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPAAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEIIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGAFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPHLSLGFMALVFLGLGYLTK
                     QVKEGKIEVNAPKKAKASAANAASGAGGAGGVTAPAKKSEEEILKEEEHKINDILKVE
                     ILELELGYGLIKLAESELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLK
                     GVSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIV
                     IDPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKI
                     LKDLLKHNIPIKDMLTILESISDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLD
                     IFILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRTEVAAVANGRIKPFILCV
                     EPQLRKFIADICYNFNINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            complement(5841..6251)
                     /locus_tag="ACJE1S_001403"
     CDS             complement(5841..6251)
                     /locus_tag="ACJE1S_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HGG0806942.1"
                     /translation="MLFTKASEYALLSLIYIAHKENPQDVDSLALELNIPKSFLAKIL
                     QTLAKDNLLKSFKGAKGGFALIKEPSQYSIKEIVNSAEKKEVSVFECSGGVCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSLTLADIMNHNGKK"
     gene            6417..6689
                     /gene="rpsO"
                     /locus_tag="ACJE1S_001404"
     CDS             6417..6689
                     /gene="rpsO"
                     /locus_tag="ACJE1S_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HGG0806943.1"
                     /translation="MALDSAKKAEIVAKFARKAGDTGSTEVQVALLSARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLAYLKRKDYNSYSKLITELNLRDK"
     gene            complement(6760..9729)
                     /locus_tag="ACJE1S_001405"
     CDS             complement(6760..9729)
                     /locus_tag="ACJE1S_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG0806944.1"
                     /translation="MLAPDMGVWLYKANLFLFGEFAYYYPFFLFILNYVYYKRNYKLA
                     NFTRRELFGIGFAFFSSLLLFAVFYPNSGYILELAYAIFSAILGHTGSGIFALLLLFF
                     SFILLFPKTTKELFKIEINFNILLKIENALKVLLMRVFGGENEKDDLSKIEPKAPIVT
                     LEKNTAFVQEKIQHENENLNLNPTEELVKYSNINASKNSIITAKENFEKLKNQILDEK
                     VEIDKESIKEAKSFIYENSQQVRNFAQKASRMSIKLDEDFNFISEEEVDMIPERFLKP
                     KKLEDIKQIDTSNKNLDEPSYKRKNIEISIPKQEIKPKIFTKELELRENLMKEAKLEQ
                     EYKAYQNEILENKVQEEIKELEKKDSLEPNLNHIIQGSKYNFGTPLQEVSSAKEEIKT
                     QNAPIPSILEKTNEVEIIDFDESEIEIKKMESINKSIHDFIPIVEELEHPYIEPTPIV
                     KIEELEPLNNQINKQIPIQEKDEITEQDNSFSKEQISQEPSQEITRQKAILAKEIELN
                     KALLREIEQGEMEKPKDFELPPLEFLTNPSHNKQEINESEIDKKIYNLLEKLRRFKIG
                     GDVISTYIGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAKSIRIQAPIPGKDVVGI
                     EVPNDEIQTIYLREILESEVFKNAKSPLTIALGKDIVGNAFVTDLKKLPHLLIAGTTG
                     SGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIPHLLTPVITDPKKAVNA
                     LSNMVAEMERRYRLMAEAKTKNIENYNEKMKELGEEELPFIVVIIDELADLMMTAGKD
                     VEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYKVGQKIDSKVILD
                     AMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDFLKDQQSVEYDESFLKD
                     QQSMGVTSSESMNNGEYDELYEDAKRVILSDGKTSISYLQRKLNIGYNRAANIIDQLT
                     ESGVLSEPNSKGQREIL"
     gene            complement(9840..12092)
                     /gene="flgL"
                     /locus_tag="ACJE1S_001406"
     CDS             complement(9840..12092)
                     /gene="flgL"
                     /locus_tag="ACJE1S_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HGG0806945.1"
                     /translation="MRITNKLNFTNSISTSMGAQSSLYQISQQLSSGIKIQNSYEDAS
                     VYIDNTRLEYELKTLEQVKQATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQSYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTL
                     EDVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKTE
                     LNNIIQAAQDEGITMEDVTNRVMTAALGNPNNGDITNLNNPVTIQINGQNFEIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNT
                     TMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQTQLAYQASLKASTT
                     ISQLSLLNYM"
BASE COUNT         3868 a         2071 c         1758 g         4525 t
ORIGIN      
        1 aattttaaaa tttttaagaa tgtatttatt attaagcttt tataatgatt gcttgtctgt
       61 aagtattatt taaggagtaa aaaataaggt gaaaaattta tattggtttg tttatttttc
      121 taaatggcaa gatatgcgta atccttggtt tattatgagt attataatga taagccttgt
      181 tttaatagcg cattttttat ttcaagagta tctttatatg agaccttgtg aacaatgtgt
      241 ttatataagg ttagatatgt taattatagc tttaggaggc atcattgcgc tgataaatcc
      301 taaaaatacc attattaaaa tccttgccta tactttagct ttttatggaa tttggcttgg
      361 attagaacat tcgttgaatt taaatcgcat tcatgaagct attagcacgg aaaacccttt
      421 cagtggtgtt aatggatgtc gcgatattcc actctaccct tttaatctgc ctttacacga
      481 acggtttcct tcttggttta aacccgtagg acaatgcgga atggattttc ccatggttcc
      541 aaagtctgct tatttaaatg ctttccaaga attttttgta ggaaaaaatg gaatttataa
      601 taatggctgg tatttaatcc ctagtttgaa atttatgaat atggctactt gctgttttat
      661 agcattttta tgctctttta ttttactttt tataatgttt gtaagctatg tttttagtca
      721 aagaaaaatt gtttttacta tcattactat aagcttagtt gtagcgctta agatattggg
      781 ttaaaaaata cttattttaa agattaaatt ttttacttgt ttatcctttt taaatagaat
      841 tactttttat atcaaattaa ggataaacaa tcatgtttaa aaaaatgaca aaaattttga
      901 caagcttgag tcttgtttgc acttttgcga tggcagatga ttttatcacc ctatcagaaa
      961 ctttgcctga ttctaaaaat tctgttgtgg aggctttttc ctataagtgt atacattgtt
     1021 acaatcacca taaatttggc accttagaaa aacttagaga ggcttttcca aatttgcatt
     1081 ttaaactcta tcctgtgagc cttatgaatg gagaatacgc aaatgaactt aacgagcttt
     1141 ttgcctttgc ccaatttaaa gatgagcaaa atggcaaaga tgctagttat agtgatagtt
     1201 tatcacataa acttgccgat gtttattttg tagtttattt tataaacaag caggacaatt
     1261 tttcaagctc ggatgaattt tatgatatag gcttaaaggc tatgaatgtc gataaaaatg
     1321 aagtattgaa ttttttaagc acccctaaag ccaaagaaat tttaaacgaa tttaaaagag
     1381 caaatgatat agctaggact tatggcactc ctgcttttgt tgtaaatggt aaatatcaaa
     1441 tcaatcctag cgccatcagt tcaatgcaag ctttagaaga tatcgtcaaa aaacttagta
     1501 atatgccata aaataaaaca atgcattttc taacactaga taatgcattg aaatttaata
     1561 ttaatttttc ttttaatgca aaaataaagt tctttagtta taattagttc gcaatatttt
     1621 taaaggttgt ttttaatgaa aaatttaagc gttcaagaaa aaaaagatct tgataattgt
     1681 gttttcaaaa ctcttggtaa aaaagaaccc tctgctttag tgcttttatt taaaaaaata
     1741 cttttaaaat taaagacttt cttttattct aaataatacc atttaaaatc attttttgta
     1801 aaagaaatat tcttaaaaga tggagcctgt ataaataatt tgcattcttt atctaaattt
     1861 tccattccat agactttcat agccattcta gaattgtgtc ttactagctc tatggctacg
     1921 caagcttgat tgttgatttt ataaagaagt gtgcctcctt ctttttcatc tatatttaaa
     1981 atgcttaaat ttttattttt actcatatct tgtatatttt tactaaaagc gaaacgcaat
     2041 ttataatata tcataatatc ttgcatagcc tttttaagat cttgcaaatt ttcattgata
     2101 gaatatccat tgtttttata caatcttaaa aaatcttcat taagaaattt ttgaaagtca
     2161 gcatccttgc ttaatttttg acactcatta tagcttttaa gaattcttac ccgccctgct
     2221 tctatcaaaa gctcaaggca atttttatca tcttgtaaaa attgcaccaa tttaacttct
     2281 tgaattttaa aatctttatt aggctttttt tcatatgcaa aatcattgag cttttcataa
     2341 acattagcaa gtgataaaga acaaagacta ataagtatcg gaaatacttt tttcattgaa
     2401 aaagctctga atgttgattt tttaaaaatt ctaccacttc taaaacttca tcaacccctt
     2461 ctttgtttga attttccaag acactgtcta tattatctat ataagcttct atagcacttt
     2521 ctagcttctc tcttttaaca cctgcatata aaagcatagc ttctaaaact atgcttaatt
     2581 catatcttag atcttctaat tcatttttta aatttttatt gtgtgtttgt ggcatctgaa
     2641 tttccttttt taagttcttt actttttatc aaatcaacga tttgagcttt gatatagtta
     2701 taatttgctc catctttata agctgcaaaa agcccaccac tagcattttt atgccctcct
     2761 ccacctacta gctttttagc catcaagctt acatcaatct taccatttgc acgaaaactt
     2821 aaggtttttc tagagcttac atcgatgaaa aaatcatagt cgggattttt aactaaaaat
     2881 tcattaccta tgatagaggt attgcctata tttgaggtaa gaattccctt atgaccctca
     2941 tattctatac tgaattcttc ttttaactcg ctaagctttt ctactacaaa ataagagatg
     3001 agattagaaa gagtgtcatc atgattttta gcaaaaaaat cttttttaat aaaatggata
     3061 gcattatcta gtaaaatatg tgaattgggt tggtttataa attttcttgc tctttcaagc
     3121 aagaaaaaca tataaaaaac ttgagcttct ttaaacatca cacgattgat ttcttttgca
     3181 ttggcaatca aacccaaaaa aacttttcca agctcaaaat tcgcatcctc acttagccaa
     3241 atatcaacag catttacaac ctgagcaaaa tttaaaagtt ctaaatcagg cttacaaatt
     3301 ttagagaaaa aatcataagt gattttagtc gcacatcttt gattatccag tagataccac
     3361 gcgtattttt gagcacactc ttcaccgctt tgatgatgat ctaataaaaa gattttgata
     3421 tttttttctt tacaaatttt atcaaattct tcacactggt ttaaatttaa attcaagtca
     3481 gtgattaaaa taatagcctg cccaaaacta ttatcttttt ctatatctgc taaaattgca
     3541 ttaaaatttt cattgatctc tttaccataa ttagaattat aaaaatttac atttttataa
     3601 taaaaattga ctatatattg acaggcatag ccatcaagat cagtatgtga aagatgataa
     3661 attttcattg atttccttaa agttctatcc taataatacc ttcggtatta aaatttgtat
     3721 tttctgctat ttctgcaaaa ctgagtacaa ctatattgat attaaaatta tagcaaatat
     3781 cagcaatgaa ttttctaagt tgtggctcaa cacaaagtat aaaaggcttg atacgcccat
     3841 ttgctactgc ggcaacttca gttcttaaag tgtctaccaa agttcctgtt tgcgctacac
     3901 ttaaaggtag atggtagcta ccatctctaa attgcacatt ttccattaaa actgcagaac
     3961 tagcagagtc taaaatgaaa atatctaaat ttcctttatc gtcaagatac atattagtaa
     4021 tcattctagc caaagacgcc cttacatgct ctataatcat atcaaagctt ttgcttactt
     4081 cagcaatatc gcttatggat tctaaaatag tcagcatgtc tttaataggt atattgtgct
     4141 tgagtaaatc tttaagaatt ttttgaataa gactcacagg agctacacct aaagcaccct
     4201 ctactatgat tggataatca tttttaacct tatcaagaag attttgcacc tcttggcgtg
     4261 taagaagttc gcttgcatgt gctttgataa gctcgctcat atgcgttgag atcacacttg
     4321 caggatctat aacgatatag ccatttaaag ttgcttcatc ttttaaattt gcatctatcc
     4381 aaagtgcatc agagttaaaa gcaggttctt ttgtagcaat cccttcaatc tcttctgtga
     4441 taaagccact atccatagcc aaatatttat caggataaat ttcagcactt gctatagata
     4501 cgccctttag tttaaagctg tattcattgg gcttaagtcg taaattatct cgaattctaa
     4561 tttttggcat taaaaagccc aagctttcgg caatacttct tctcatggag cgaattcttt
     4621 cggttaattc gctttcggca agttttatca aaccataacc tagctcaagc tctaaaattt
     4681 caaccttgag tatatcgttt attttatgct cttcttcttt taaaatttct tcttcgcttt
     4741 ttttagcagg agcagtaact ccgccagccc cacccgctcc acttgcagca ttggccgcac
     4801 ttgcttttgc ttttttaggt gcattaactt cgattttacc ctcttttacc tgtttggtta
     4861 gataaccaag tcctaaaaat accaaagcca taaaacctag tgataaatgt ggcaaacctg
     4921 gaacaagagc aaagataaaa aggacaaaac ctacgattaa aagcgttcgg tattcgctta
     4981 aaagctgtgt caatgtccct tcggcaaaat tttcctcatc cttacttgcg cgggtaatga
     5041 taatagctgt tgctgtagaa gtgataagtc ctggaatttg tgatacaaga ccatcgccta
     5101 tggtaagtat agtataggtg gaagctgcat cagataaggc catatcgtgc tgaaaagcac
     5161 ctattaaaaa gccgcctata atatttataa tggttataat aatacctgca accgcatccc
     5221 ctttgataaa tttagaagaa ccatccattg caccatagaa attggcttca gcgataattt
     5281 cttgacgcct cgctcttgca gtttgctcat caataagtcc tgcatttaaa tccgcatcga
     5341 tagccatttg ttttcctggc atcgcatcaa gggtaaatct tgcttgtact tcagagaccc
     5401 ttgtactacc tttggttaca accataaagt tgatcaaaac caaaatacaa aatacaatca
     5461 ccccaatgac catatttcca cccacaacaa attctccaaa ggctgcgatg atctcactca
     5521 ctgctgctgg accattctgc ccttcgctta gaatcattct tgtagtggct atatttaaag
     5581 aaagtctaaa aagcgtaatg atgaggataa gagttggaaa agtggttaaa tccgttggtt
     5641 tagggatata aatagaaatt aaaataataa gcactgacaa agcaatactt aaagctaaaa
     5701 aaaagtccaa aataggactt ggcaaaggaa cgataataat agctaaaata catactataa
     5761 atccaactat agtaaggctt ttagccctta atacaggacc aattaaaggc cccaaaaaag
     5821 gaaaaacaag atcgactaat ttattttttg ccattatgat tcataatatc cgctagggta
     5881 agggagtcta aaaattcatc tactttgttt tgtaaattta caagcattgg cataagagta
     5941 caattttctt ctttgttgtt agggcatact ccaccactgc attcaaaaac acttacttct
     6001 ttcttttctg cactattgac aatttctttt atgctgtatt gacttggctc tttaataaga
     6061 gcaaaaccac ctttagcgcc tttgaaggat tttaataaat tgtctttagc tagagtttgt
     6121 aaaattttcg ctaaaaaact tttaggaata ttaagttcta atgctaaaga atcaacatct
     6181 tgaggatttt ctttatgagc gatataaatc aaagaaagta aagcatactc gctagctttg
     6241 gtaaatagca cggatttctc cttttattta ataaaaaaat agttttaatt ataataaaaa
     6301 aaccttagaa aatggcttaa aaaatgatga ttgaaataaa aatataaaat tcagcttatt
     6361 ttttgtttta tttgatataa tcttagcttt taaaatcacc aatcaggagg tctatcatgg
     6421 ctttggattc ggctaaaaaa gcagaaattg ttgcgaaatt cgctagaaaa gcgggcgata
     6481 ctggctcgac agaagttcaa gtagcacttt taagtgcaag aattgcagaa cttacagaac
     6541 atttaaaaat ctacaaaaaa gatttttctt caagattagg acttttaaaa cttgtaggtc
     6601 aaagaaaaag acttttagct tatctaaaaa gaaaagatta caattcttat agtaaattaa
     6661 ttacagaatt aaatctcaga gataaataaa atttcacaag cccttttttt cagggcttga
     6721 tcttcaaatc attctttaat cttttaaatt accaaagatt tataaaattt ctctttgtcc
     6781 tttagagttt ggttcgctga gcactccgct ttctgtaagc tgatcaataa tattggctgc
     6841 gcggttgtat ccgatattaa gctttctttg cagataagaa atacttgttt ttccatcgct
     6901 tagtataacg cgtttggcat cttcataaag ttcatcatat tcgccattat tcatactttc
     6961 actacttgtt acgcccatac tttgttgatc ttttaaaaag ctttcatcgt attctacgct
     7021 ttgttgatct tttaaaaagt ctacgatttt ttctatctca aattcgcttg caaatggagc
     7081 atgtaaacga acgatagagc ttgttccagg aggagtaaac aaacaatccc ctctacctaa
     7141 caaactttca gcccccatag catctaagat aactttagag tcaatttttt gccctacttt
     7201 ataagaaatt ctacttggta aattggcctt gataagccct gttacaacat ctaccgatgg
     7261 gcgttgtgtc gcaacgatca aatgaattcc acttgctctt gccatttgcg ctaaacgacc
     7321 tatataaaat tccacatcct tacctgcagt catcatcaaa tcagccagtt catcgataat
     7381 cacaacaata aaaggaagtt cttcttctcc tagctctttc atcttttcat tataattttc
     7441 tatgttttta gtttttgctt cagccattaa acgatagcgt ctttccattt ctgcaaccat
     7501 atttgaaaga gcattaactg ctttttttgg atcggtgatt actggtgtta aaagatgagg
     7561 gatgtcatta taaatactaa attcaagcat ttttggatct atcatcatta agcgtagagt
     7621 ttttggagag ttgcgatata aaaggcttaa aagcatagaa tttataccca cgctctttcc
     7681 acttcctgtg gttcctgcaa tgagtaaatg tggaagtttc ttaagatcag ttacaaaagc
     7741 atttcctact atatctttac ccaaagctat ggttaaagga ctttttgcgt ttttaaagac
     7801 ttcgctttct aaaatttctc ttaaataaat agtttgaatt tcatcatttg gcacttctat
     7861 acccactaca tcttttccag gaataggcgc ttggatacgg attgactttg ccattaaagc
     7921 catggttaaa tcatcttgca aatttaaaat acgactgact ttcacatctg cactcggacg
     7981 aaattcaaaa gtagttacaa caggtcctat gtaagtgctg ataacatcgc cccctatttt
     8041 aaaacgacgc aatttttcaa gtaaattata gattttttta tcaatttcac tttcattaat
     8101 ctcttgcttg ttgtgactag ggtttgttag aaactcaagc ggtggaagct caaaatcttt
     8161 aggtttttcc atttcgccct gctctatttc cctaagtaaa gctttgttaa gctcgatttc
     8221 tttagctaaa attgcttttt gcctagtgat ttcttggctt ggttcttgtg aaatttgctc
     8281 cttgctaaag ctattgtctt gctctgtgat ttcatctttc tcttgaattg ggatttgttt
     8341 atttatttga ttatttaaag gctctagctc ttcaattttt acaataggag taggctctat
     8401 ataaggatgt tccaattctt caactatggg tataaaatca tggatgcttt tatttatgct
     8461 ttccattttt ttgatttcaa tttcactttc atcaaagtct ataatttcaa cctcatttgt
     8521 cttttctaag atagaaggaa ttggtgcatt ttgtgttttt atttcttctt ttgcgcttga
     8581 tacttcttgc aaaggtgtac caaaattgta tttacttcct tgtatgatat gatttaaatt
     8641 gggctctaaa ctatcctttt tttctaattc tttaatttct tcttgaactt tattttctaa
     8701 aatttcattt tgataagctt tgtattcttg ttctaatttt gcctctttca ttaaattttc
     8761 tctaagctct aattctttag taaaaatttt tggttttatt tcttgcttag gtatagaaat
     8821 ttcaatattt tttcttttat agcttggctc atctaaattt ttattgcttg tgtcaatttg
     8881 tttaatatcc tcaagctttt taggttttaa aaatcgttct gggatcatat ctacctcttc
     8941 ttctgaaata aaattaaaat cttcatcaag ttttatactc attctactcg ctttttgggc
     9001 aaaatttctt acttgttgcg agttttcata aatgaaactt ttagcttctt ttatgctttc
     9061 tttatctatc tctacttttt cgtctaaaat ttggtttttg agtttttcaa agttctcttt
     9121 tgcggtgatt atggaatttt tgcttgcgtt tatattgcta tatttaacaa gctcttctgt
     9181 tggatttaag tttaaatttt cgttctcatg ttgaattttt tcttgaacga aagctgtatt
     9241 cttttctaaa gtaacaatag gtgctttagg ctctatcttg cttaaatcat ctttttcatt
     9301 ttctccacca aaaactctca ttaataatac ttttaaagca ttttctattt tgagtaaaat
     9361 attaaaattg atttcaattt taaaaagctc ttttgtagtt tttggaaaca ataaaataaa
     9421 agaaaaaaac aaaagtaaaa gagcgaaaat tccgctccca gtatgtccca aaatagcaga
     9481 aaaaatcgca taagcaagct ctagtatata gcctgaatta ggataaaaaa ctgcaaataa
     9541 aagcaaactc gagaaaaagg caaatcctat accaaaaagc tctcttcttg taaaattagc
     9601 taatttgtaa tttcttttat aataaacata atttaaaata aataagaaaa aaggataata
     9661 atacgcaaat tctccaaaca aaaacaaatt tgccttataa agccaaactc ccatatctgg
     9721 agctagcata caaagacaca gataaaagat accaaaagta gaacttgtaa agatggcttc
     9781 ttttttgatg atttttcctt gaaaataatt ttttaagaag ccattatagc atagtttttt
     9841 tacatataat ttaataagct aagttgagaa attgttgtac tagctttaag agaagcttga
     9901 taagcaagct gtgtttgcat taaattcatc atcgcctcac cataatctac atcaatcaca
     9961 tttgatttta tactttggac attaacgctt aaaaaggatg tgcgtgtatt aacaccttcg
    10021 atagtattat gatatgctcc catagttgta ttaagcttgc taacatgatc tgctaaatga
    10081 tcaagtcttt ctaaagctcc ttgcatacct gtatttctag ggttttcact ttcggagtct
    10141 gctctcatat tgccttttaa aacagcatca atcattgaat ctaaatcttt aataatatcc
    10201 acatttggct catctatagt taaagaatta ttcgcgctaa aactaaaatt tggaccattt
    10261 tgtacagtag aagttgtggt aaaaggaggt gctggaaatt ggccactttg agaatcacta
    10321 agagaaattt ctatattagt gcctgaagaa agtttatcag taacactaat acgaccttta
    10381 taatccatac ttacatcaac agtagcttgt gaatctttca tgagttgttg tatttgggta
    10441 taatctgcat tattaatttg accattattg gcttgtatgg ttgttgtagg aattttatct
    10501 gcagcaaaca tacctataat atcattaatt tgaccataag taatatcatt tgatcctgta
    10561 acaaccccac tatttccagt tgcaggatta gtatgcataa taggaaagct tatggtttga
    10621 cctggattat taggatcagg atagcttaca gttgaagttt gtaaatttat agtaacatcg
    10681 taagaatttc cacctttgga attgactttt aaatttaaag tagtaccatt taggctatct
    10741 cctgccatta cctcgctaag tttggttgaa tcagtggcat aagcattgct tcctttgata
    10801 acttgagaaa cattaccata aacagtattg ccattttttt caaaatacac attatcgtaa
    10861 tcagctccat tagcagcatt tccatctgta tctgtcattt tacttttgat aaaatcagtt
    10921 tgttttaaat caatttcaaa gttttgtccg ttaatttgaa tggttacagg attatttaaa
    10981 tttgtaatat ctccattatt gggatttcct agtgcagcag tcataaccct gtttgtaaca
    11041 tcttccattg taatgccttc atcctgtgct gcttggataa tattatttaa ttcagtttta
    11101 tcatcagctt gtggtgtgaa agctacagca tgaaaatcga gtttattatt accttgcttt
    11161 agatctgtaa tttgaatttg accactatca ttcatactta cttctactac tttattattt
    11221 ggagtattac cataaagagc tccaatattt tccattacat cttctaaagt atcttcgggt
    11281 ttgacgagta cagcactttt aaaacttgtt ccatcgggtc ttgtaccttg aacataaaga
    11341 gttgttggag gaaaatctag tttgctatca tcatactcaa agtctttgtc agcatctaag
    11401 ctattatctt ttacataact ttgtccgata agttgttgcc atttagaatc tcctgtgaga
    11461 tatttagttt tatcagggtc tttatttaaa tcccaacgat tatctgtaaa actaacatta
    11521 gtgcttattt gttttttata gtctccatct gctttaaaaa ataaatccca acctggtata
    11581 ttgtatgggc tttcagttcc agctccagtt actacattaa tattattttt atctccataa
    11641 taatttccat tagaatcaaa aggtttgttt gcaacttgag aacccgcaaa aagatattgt
    11701 ccattaacgc tagtattagc aagctgaact atgctttctt taatgcgttc taattctttg
    11761 gctatagcct ctcttgaagt ttgagaatta ctatcgcttg ctgcttgagt aacctttact
    11821 ttaaaatcct caagaagctt aaccatatct tgtaaagctt tcatgctatt ttgcgtcatt
    11881 tctttagctg agtttgtagc ttgtttaact tgctctaaag ttttgagttc atattcaagg
    11941 cgagtattat ctatataaac acttgcatct tcataagaat tttggatttt aatccctgat
    12001 gaaagttgct gcgaaatctg atacaaagag ctttgagcgc ccatagaagt gcttatagaa
    12061 tttgtaaagt tgagtttatt tgtaattctc atattcatcc ttggagtttt gatttaaata
    12121 aatcttttca aacattgctt tgtaaataca agcaataatt gttccaattt tatttttaca
    12181 atatcggcat caataaaaat ttaataatat tttatcctta aa
//
LOCUS       DBBXOW010000055        12200 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.056, whole genome shotgun sequence.
ACCESSION   DBBXOW010000055 DBBXOW010000000
VERSION     DBBXOW010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12200
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.056"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..547
                     /locus_tag="ACJE1S_001407"
     CDS             <1..547
                     /locus_tag="ACJE1S_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806946.1"
                     /translation="YENGLSPALDEFNLTLPFIFDDYITTASVALPILKKRNASYENL
                     NIANNHQKFITSNAFDFDQIVASEFKANLTSIIIKSLISSTLKTSLNMAVAKNDESGI
                     LSLATNIFSIATTRSDLRFWNFLPKNIQIMMIENDGSVQIYDDKNQKIYSSEVDIDKN
                     VLIVVRSFASQFPARVYKIEN"
     gene            578..1201
                     /gene="lpoB"
                     /locus_tag="ACJE1S_001408"
     CDS             578..1201
                     /gene="lpoB"
                     /locus_tag="ACJE1S_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HGG0806947.1"
                     /translation="MKKNIFIIFSAFFAVFFAACGAPVYTDGYASQKKQGDALTLGLD
                     REDFEKTAQIMIDSMLSDPAFANIQPGQRKVIAIGKIINDTPQRIDTDKLISKITIAL
                     RKSGKFVLTTAVAAGGARDEMSEAVRELRDNDEFNQNTISSKGTLVAPDFSISGKIRQ
                     DNVKLKNGDIQAEYFFYLSVTDLNSGLAYWEDERTIDKTGSSKSVTW"
     gene            1201..2187
                     /locus_tag="ACJE1S_001409"
     CDS             1201..2187
                     /locus_tag="ACJE1S_001409"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HGG0806948.1"
                     /translation="MKKIFLFLTILSFMWAQDDVIIYDYVPLEDVNLSSLDPVQSLKT
                     LPHQRNKFQKVVQGNGTGESKEEALNNALIDALSQFKGVSNVNLRQELQSIDLSFSHL
                     GQISQKSKSVLQNVSKGYIDTYKVDKIDQNGTLWQVEISAFKSLYQNDNKPKLVILND
                     KNKEESYLKRALYDAFSQDENFTLLEREHDFKDENKIIKSEDGSSEESYKLGNVLGAD
                     YILEFEILDITQVKQSKISYQNNTKASINIAYKLIFYPTRELVFSKTFNTTFTLSGDS
                     KKEQKNWENIALFMQREMEKSLFFDTLEEDNKQEGKENTYKLHENGGVNLGF"
     gene            2344..2652
                     /gene="rplU"
                     /locus_tag="ACJE1S_001410"
     CDS             2344..2652
                     /gene="rplU"
                     /locus_tag="ACJE1S_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HGG0806949.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            2663..2917
                     /gene="rpmA"
                     /locus_tag="ACJE1S_001411"
     CDS             2663..2917
                     /gene="rpmA"
                     /locus_tag="ACJE1S_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HGG0806950.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGIGKDHTIFALIDGFVKFERKDKDRKKVSVYPV"
     gene            3022..4077
                     /gene="obgE"
                     /locus_tag="ACJE1S_001412"
     CDS             3022..4077
                     /gene="obgE"
                     /locus_tag="ACJE1S_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HGG0806951.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     VLLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMREMPLKEQFIVLRKELEKFSNELFGREFG
                     IMISKSDSVNLGEDFAEQIAQNIANLEEYLKSIDNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKKLREKREKKVIK"
     gene            complement(4121..4624)
                     /locus_tag="ACJE1S_001413"
     CDS             complement(4121..4624)
                     /locus_tag="ACJE1S_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HGG0806952.1"
                     /translation="MANFRIQTYLFALIVALFFIACDSGENFKALNSNKIYNFSYNGF
                     EKSLKLDDQTQNFALVFFTKDCGVCKEQIPILQDLAKNYDFNIFIVLGDAKDAKDAKA
                     WADEKGLSHLALFYEKKAAKYLSGAVGEIYGVPVLSFFKEGKIDEKFIGLTPYGVLEN
                     EIKKLKI"
     gene            complement(4585..5073)
                     /locus_tag="ACJE1S_001414"
     CDS             complement(4585..5073)
                     /locus_tag="ACJE1S_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HGG0806953.1"
                     /translation="MKKVFLFFISLFLLNACSFDSNQDQGKIGQIGAEISAKDTLGKA
                     VKLADDKSNIKVLVFFQNGCPSCLQELPSLDKFIQEHPNKISVYAINSVDKVEVVQVL
                     AEQLNFKNIKVLTDDLKITNDRYAVFATPTTIILKDGIIKERILGEKPWQTFESKLIS
                     LL"
     gene            complement(5070..5717)
                     /locus_tag="ACJE1S_001415"
     CDS             complement(5070..5717)
                     /locus_tag="ACJE1S_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0806954.1"
                     /translation="MKELIQIKNLSKKFGKVKALDNINLNIYKGEWLAIMGPSGSGKS
                     TLLNILSLMDDPSSGKYILDNEDLEQINEEQKITLRREKIGLIFQQFHLIPYLSALEN
                     VMLSQYYHSSVDEEDAKAVLEKVGLSHRLSHLPSQLSGGEQQRVCIARALINNPEILL
                     ADEPTGNLDEANEKIVLETLQKLKNEGKTIVLITHNPELAKFADRTLILQHGILK"
     gene            complement(5717..6835)
                     /locus_tag="ACJE1S_001416"
     CDS             complement(5717..6835)
                     /locus_tag="ACJE1S_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HGG0806955.1"
                     /translation="MVDKFFLNELFKSIAFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDTKLSKELKAYGANVIIEPKNDKELILNQDYEEAKKNLKARALTPFLYTFLNLGSTS
                     GVVLGTDFRALKITKPFIEVKEGSFSLSDFDENSAFLGINLSKQLGLKVGNELQIYNP
                     ENGKTTKLTIKGILLSNDELDSIVLAPLSVVQNLSDTFGIQYANAVVYGNFDEINTKT
                     KNISNESINAKPISSVSLSEGLVLDKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFACEYFIISLFASIIGAFCGIFLANIFGYLIFNASIDFR
                     FKAIFMALIVSLFFAFLAAFFPIKKALKINVCENLKGE"
     gene            complement(6825..8123)
                     /locus_tag="ACJE1S_001417"
     CDS             complement(6825..8123)
                     /locus_tag="ACJE1S_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG0806956.1"
                     /translation="MMLVKMITHSIFRNKIQKFLAFLTCFLATLLLCTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMLKDIYWRNNIT
                     AFAPFLEGKIEIKSNNSSKKILLYGTYFQKAIEIKDDDDFITGIKSLYPYLKVQGKWA
                     KDDSNEIMLGEDFAKNNDLKINDTIQLIGENKISKEVKIVGILLHANPKMSNKIITPL
                     NLAQELLEKKGLYASAEVRAFTIPESALSEKVRRMGEEKLDQIEYDKWYCSAYVGSIA
                     SQISDGLPGADAKALNAISDAQSLVVKKIQSLMAITCIICLIVASIAISSLMSSEIHR
                     RKKEIGLLKVLGANTFQIYLLFAGENLIIALVSAVFGFIFGIGLSELISLGIFGYFIN
                     IAFIALPLSLVFAGLIAILGCLLPIKNIANLSPAGVLYGR"
     gene            complement(8110..9513)
                     /locus_tag="ACJE1S_001418"
     CDS             complement(8110..9513)
                     /locus_tag="ACJE1S_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S-containing protein"
                     /protein_id="HGG0806957.1"
                     /translation="MSIYFVHFLSSILPLSILMAFITPDKRYIFKSFLALFLGFLFGY
                     FAFFIAAQFLKTENLIFNFNFIFIACLLLSFVFYFWQKIEILSFILLGNLSFCIALHY
                     YNLTQDFPIFNGVLIDSEAISSLGFIALALLICILIFFFLKWQKNINKKASFILFLIL
                     IFIEGDKVLANILLTLMRNSFIETHTFLVSFVGKSNYFGVFGIYVYLFFIIFLAFLSL
                     QIRKKNIVKKQILDIVYRKNEAKNTLINRYFSSVFISCILSFCIILYFFMISSKPLSI
                     DKPTELLPDKNGKFIFDVALLRDNKLHRFAYISEQGKVIRFFLINKREDRDSPVAVFD
                     ACAICGDMGYIKKEGELICISCNVRIFLPSVGKTGGCNPIPLKYDYDGEKITIDVKDV
                     VAGSNYFSQIKDIQVQDPVSKDKIINTQAPFSYSYKGITYYFSNEKNYEEFKKDPMKY
                     VEDTEALFLIQRRNNAS"
     gene            complement(9595..10134)
                     /locus_tag="ACJE1S_001419"
     CDS             complement(9595..10134)
                     /locus_tag="ACJE1S_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HGG0806958.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            complement(10131..12200)
                     /locus_tag="ACJE1S_001420"
     CDS             complement(10131..12200)
                     /locus_tag="ACJE1S_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HGG0806959.1"
                     /translation="MKFFKILFFFSMLFLANSVFARVDDYVAEANTIKNILEESIKSY
                     EKGDNLKAKKLSEDAYFQHFENMEGSIGRNIGKKAITMERKFTNLRRLYKDKAPIEQI
                     DALIESLYYDLDEVAPILQNGYRLQAEASDTNYDKAAAEKSSIQANAKREAEAEALIA
                     QMMGIDKNDLAKTNSSSSTQNETINDSINNDLQAAAAMDARLQFILDNISTKFSQAAN
                     AFKEKNYQASKDFLNDALFSDYRNTKVEILVNKFTKAGNDQKIQQAIRTLIRQINDAK
                     IDEKGLRDGLDNIEEQIFDVFLQIPNSELSSLQISGFNDETKGKDYAKVSNDIKLALD
                     EILKNYDGFSASIVDDLQGIYLDIFEASGMENKIGAVDSGLKLKIESLFSKSVALIKA
                     STDKKELEATFNDLEQLIASSVDKIQDSTPYSLFIWALGIILREGLEALIIIVAIVSY
                     LVQSGNKNRLNIAYSALFTGVILSFITAFGVSWLFKENAGQSRELIEGITMLVAVLLL
                     FYVGFWLLSNAQNKKWTSFIKQGAIDAISNNSAKTLWITVFLAVYREGAETVLFYQAL
                     LFDAKTSTDFGAVFGGLGLGILILIVLYFLLKAGAIRIPVKQFFYITSYIIFYMVFVF
                     TGKGIAELIEGKVIIPSLIPMNFEPILWLGIYPYYETLIPQFTVLIMLIIGILITKQI
                     SKKGVKS"
BASE COUNT         4284 a         1902 c         1919 g         4095 t
ORIGIN      
        1 atatgaaaat ggattaagtc ctgctttgga tgaatttaat ctaaccttgc catttatctt
       61 tgatgattat attacgactg ctagtgttgc tttacctatt ttaaaaaagc gtaatgcttc
      121 ttatgaaaat ttaaatattg caaacaatca tcagaaattt ataacttcta atgcttttga
      181 ttttgatcaa attgttgcga gtgaatttaa agccaatttg acttcaatca tcatcaaatc
      241 tttaatctca agcactttaa aaacaagttt aaatatggct gtggctaaaa atgatgagag
      301 tggaatttta agtcttgcta caaatatttt tagcattgca accacaagaa gtgatttaag
      361 attttggaat tttttaccta aaaatataca aattatgatg attgaaaatg atggatcggt
      421 acaaatttat gatgataaaa atcaaaaaat ttattctagt gaagtggata ttgataaaaa
      481 tgtattgatt gtagtgcgtt cttttgcttc tcaatttccc gctagggttt acaaaattga
      541 aaactaaaag agtataatta caaaaaaagg agaaataatg aaaaaaaata tttttataat
      601 ctttagcgca tttttcgcag tattttttgc agcttgtgga gcgcctgttt atactgatgg
      661 ttatgcaagt caaaaaaaac aaggtgatgc tttaacctta ggacttgata gggaagattt
      721 tgaaaaaact gctcaaatta tgatagatag tatgttaagc gatcctgctt ttgccaatat
      781 tcaaccaggt caaagaaagg ttattgctat aggtaaaatt atcaatgata ctccccaacg
      841 cattgataca gataagctca ttagtaagat cactatagcg cttagaaaat caggtaaatt
      901 tgtcctaaca acagctgttg cagcgggtgg agctagggat gaaatgagtg aagcagtaag
      961 agaattaaga gataatgatg aatttaatca aaacaccatt tctagcaaag gaactttggt
     1021 tgcacctgat ttttcaatca gcggaaagat ccgccaagac aatgtcaagc ttaagaatgg
     1081 cgatatacaa gcagagtatt tcttttatct aagcgttacg gatttaaatt caggacttgc
     1141 ttattgggaa gatgaaagaa cgattgataa aacaggctca agtaaatcgg taacttggta
     1201 atgaaaaaaa tctttttatt tttaaccatc ttgagtttta tgtgggcgca agatgatgtt
     1261 attatttatg attatgttcc gctagaggat gttaatttaa gttctttaga tcctgttcag
     1321 agtcttaaaa ccttgccaca ccaaagaaat aaatttcaaa aagtggtgca aggtaatgga
     1381 acaggagaaa gcaaggaaga agctttaaat aatgctttaa tagacgcttt atcacaattt
     1441 aaaggagttt ctaatgtcaa tttaagacaa gagcttcaaa gtattgattt aagcttctct
     1501 catttaggac aaatttcaca aaaatctaaa agtgtccttc aaaatgtaag taagggttat
     1561 atcgatactt ataaagtaga taaaattgat caaaacggaa cgctttggca agttgaaatt
     1621 tcagctttta aatctttgta tcaaaacgat aataaaccta aattagtaat tttaaacgat
     1681 aaaaacaaag aagaatcata tttaaaaaga gctttgtatg atgctttttc acaggatgag
     1741 aattttactc ttttggaaag agagcatgat tttaaagatg aaaataaaat tataaaaagc
     1801 gaagatggtt ctagcgaaga aagctataaa ttaggcaatg ttttgggtgc tgattatatt
     1861 ttagaatttg agattttaga tattactcaa gtaaaacaaa gtaagataag ctatcaaaat
     1921 aatacaaaag caagtataaa tatagcctat aagcttatat tttatcctac aagagagctt
     1981 gttttttcta aaaccttcaa tacaactttt actttatctg gcgacagcaa aaaagagcaa
     2041 aaaaattggg aaaacattgc gttatttatg caaagagaaa tggaaaaatc attatttttt
     2101 gatactttag aagaagataa caaacaagaa gggaaagaaa atacttataa acttcatgaa
     2161 aatggcgggg tcaatcttgg cttttaaatt gctttagggt ttattttaaa ctctaaagtc
     2221 tttcttaaat tcatcaaata ttaaagaaaa tttttgtaaa attaaaactt ttctagccat
     2281 taaagctttt aaatccgaat ttcggtgctt tgtggtactt accaaattat taaggaaaaa
     2341 gcaatgtatg ctattattaa acacagcgga aagcagtata aagttagcgt tggcgatgag
     2401 ttaaagctag atcactttga agctgaaagc aaagcaagta ttgaagtaag tgaagttctt
     2461 gctatcaatg ataaagaatt aaaggtaggt gcgcctttcg tagcaggtgc aaaagttgtt
     2521 ttggaagtga ttaatcacgg aaaagataaa aaagttgtga tttataaaaa aagacgcaga
     2581 aaagattcta aacttaaacg cggttttaga agacaattca ctcgcgttgt agtaaaagat
     2641 attaaagctt aaggagtaaa gaatggcaca caagaaaggt cagggttcaa ctcaaaataa
     2701 ccgcgattct ataggtcgtc gcttaggtgt taaaaaattt ggtggtgaat ttgttagagc
     2761 aggaaatatc attattcgcc aaagaggaac tgcaactcat gcaggaaata atgtaggcat
     2821 aggaaaagat cacactatct ttgctttaat tgatggtttt gtgaaatttg aaagaaaaga
     2881 caaagacaga aaaaaagttt ctgtatatcc tgtataagtt tttagggcgt ttttacgcct
     2941 tagaaacttt aaatttataa atttaacttc tataatttat tctaatttag ctttataaat
     3001 ttaaaatcaa aggcaattat aatgtttatt gatagtgtta agattacttt agcttcgggc
     3061 gatggtggca aaggcgcggt gagttttcgt cgtgaaaagc atgttcctct tggcgggcct
     3121 gatggtggcg atggaggaaa tggcggggat atcatcttcg tttgcgataa taatacacat
     3181 acacttgtaa attttaaagg taaaagagag cttcgcgcgc aaaatggcgc aggtggaatg
     3241 ggacgcaaca aaaatggaaa aaagggtgaa aatttagaac ttattgtccc tgagggaacg
     3301 caagttattg atgcgcagac taatgaagtt ttattagatc ttacaaaaga ggggcaaaga
     3361 gaactttttc taaaaggtgg caaaggaggg cttggaaata cgcattttaa acatgcaacc
     3421 aatcagcgcc ctgattatgc acagccaggc attaaaggcg aaagtcgttt agtaagactt
     3481 gagcttaagc ttatcgccga tgtaggactt gtaggctttc caaatgtggg aaaatccacc
     3541 cttataagtg tagtttcaaa tgcaaagcct gaaatcgcaa attatgaatt taccacgctc
     3601 acaccaaaac tagggcttgt agatgtggat gagtataatt cttttgtgat ggctgatatt
     3661 ccagggatta tcgaaggtgc aagtgggggc aaaggcttag ggcttgcatt tttaaaacat
     3721 atagaaagga ctagcttttt actttttgta ctagatccta tgagagaaat gcctttaaaa
     3781 gagcaattta tagtgttaag aaaagagctt gagaaatttt caaatgagct ttttggacgt
     3841 gagtttggca taatgatttc aaaaagtgat agtgtgaatt tgggtgaaga ttttgccgag
     3901 cagatcgccc aaaatatagc gaatttagaa gaatatttaa aaagtattga taatccacaa
     3961 agctttttaa tcaaagtatc aagccttgaa aaaactggac ttaaagagct taaatttatg
     4021 cttttagaag agattaaaaa attaagagaa aagcgtgaaa aaaaggtgat aaaataatca
     4081 cctcgagata ttttaattat aatcttgatt tatagcaaaa ttaaattttt aactttttaa
     4141 tctcattttc aagcacacca taaggcgtta agcctatgaa tttttcatct atcttgcctt
     4201 ctttaaaaaa gctaagtaca ggtactccgt atatttctcc aactgcacct gagagatatt
     4261 tggctgcttt tttttcataa aataaagcca gatgcgacaa acccttttca tctgcccaag
     4321 ctttagcatc ctttgcatct ttagcatcgc ctagtactat aaaaatatta aaatcataat
     4381 ttttagctaa atcttgcaaa ataggaattt gctctttaca aaccccacaa tctttagtaa
     4441 aaaatactaa tgcaaaattt tgtgtttgat cgtctaattt taaacttttt tcaaaaccat
     4501 tataagagaa attataaatt ttattgctat ttaaagcttt aaaattttct ccactatcgc
     4561 aagctataaa aaataaagct acaattaaag caaagagata agtttggatt cgaaagtttg
     4621 ccatggtttt tctcctaaaa ttctttcttt tataatccca tctttaagta tgatggtggt
     4681 tggagttgca aatacagcgt agcgatcatt ggtgatttta agatcatcgg ttaaaacttt
     4741 gatattttta aaatttaatt gttcggccaa aacctgaacg acttcaactt tatctaccga
     4801 atttatagca taaacactga ttttatttgg gtgttcttgt ataaatttat ccaaagaagg
     4861 cagctcttgc aaacaagaag gacatccatt ttgaaagaaa actaagactt ttatattgct
     4921 tttatcatca gctaatttaa cagcctttcc taaagtatct ttggctgaaa tttcagctcc
     4981 tatttggcca attttacctt ggtcttgatt tgagtcaaaa gagcaggcat tgagcaaaaa
     5041 aagacttatg aaaaataaaa atactttttt cattttaaaa ttccatgttg caagataagg
     5101 gtgcgatctg caaattttgc taattcggga ttgtgtgtga tcaagactat ggttttaccc
     5161 tcatttttta atttttgcaa ggtttcaaga acgatttttt cattggcttc atccaaattc
     5221 cctgtaggct cgtcagcaag taaaatttca ggattgttaa tcaatgctct tgctatacaa
     5281 actctttgtt gctctccacc gcttagttgg cttggtaaat ggctaaggcg atgtgaaagc
     5341 cctacttttt caagtacagc ttttgcatcc tcttcatcta cgctagaatg atagtattgc
     5401 gaaagcataa cattttctaa ggcactaaga taaggaatga gatgaaattg ctgaaaaata
     5461 agcccgattt tttctcggcg caaagtgatt ttttgctctt catttatttg ttctaaatct
     5521 tcattatcta aaatgtattt accactgctt ggatcatcca taagagataa tatatttaaa
     5581 agcgttgatt ttccacttcc agaaggaccc atgatggcaa gccattctcc tttgtaaata
     5641 tttaaattta tattatccag tgcttttact ttaccaaatt ttttgcttaa atttttaatt
     5701 tgtataagtt ctttcattat tcacctttca aattttcaca gacattgatt tttaatgctt
     5761 tttttatagg aaaaaaggca gctaaaaaag caaaaaacaa agaaacaatt aaagccataa
     5821 atatagcctt aaatctaaaa tctatacttg cattaaaaat caaatatcca aatatatttg
     5881 ctaaaaatat cccacaaaaa gctcctataa tgctagcaaa aagactaatg ataaaatatt
     5941 cacaagcaaa aagcttgaaa atttcacttt ttttagcacc caaggctaaa cgcaaggcaa
     6001 tttctttttt acgcgaaaat ataatcgagc ttagagtggt gtttacactt gttgtgacta
     6061 tgattaagac aacaagtatg attaaaaaca ttaaagcttt tattttgtct aaaactaggc
     6121 cttcgcttaa agatactgat gaaataggtt ttgcattaat gctttcattg ctaatatttt
     6181 ttgtttttgt atttatctca tcaaaattcc cataaacaac cgcattagca tactgaattc
     6241 caaaggtatc gcttaaattt tgtactacgc ttaaaggcgc taaaactatg ctgtctaatt
     6301 catcattact taagagtatg ccttttatcg taagcttggt agttttgcca ttttctgggt
     6361 tgtaaatttg aagttcattg cctactttaa gtcctagttg tttggataaa ttaataccca
     6421 aaaaagctga attttcatca aaatcactta gagaaaagct cccttcttta acttctataa
     6481 aaggcttagt tatctttaag gctctaaaat ctgtacccaa aactactcca ctagtgctac
     6541 ccaaatttaa aaatgtatac aaaaaaggag ttaaggctct agcttttaaa ttcttttttg
     6601 cttcttcata gtcttgattt aagataagtt ctttatcatt tttaggctcg atgataacat
     6661 ttgctccata agcttttaat tctttagaaa gctttgtatc aatatcaaaa taaatattta
     6721 aaaaagccga gcaagttagt gctcctataa aaacacttaa gacaataata aaaagtcttt
     6781 gataagaaaa agcaatgctt ttaaaaagct catttaaaaa aaacttatct accataaaga
     6841 actcctgcgg gagaaagatt tgcaatattt tttataggaa gcaagcatcc aagtatagct
     6901 atcaaacctg caaatacaag acttaaaggc aaggctataa aagcaatgtt tataaaatat
     6961 ccaaaaattc caaggctgat aagctctgaa agtcctatgc caaaaataaa tccaaataca
     7021 gcagaaacta aagctatgat caaattttca cctgcaaaaa gtaagtaaat ttgaaatgta
     7081 tttgccccca gtacttttaa aagccctatt tctttttttc tgcggtgaat ttcagaactc
     7141 attaaacttg atatagcaat acttgcaaca ataagacaaa taatacaagt aatagccatc
     7201 aaagactgaa tttttttaac aaccaaactt tgtgcatcgc ttatggcatt gagtgctttt
     7261 gcatccgctc ctggcaagcc atcgctaatt tgactagcaa ttgatcctac ataagctgag
     7321 caataccatt tatcgtattc tatttgatcg agtttttcct cgcccattcg gcgtaccttt
     7381 tcagaaaggg ctgattcagg tatggtaaaa gctcttactt cagcacttgc atataagcct
     7441 tttttttcta ataattcttg agctaaattt aaaggagtga tgattttgtt tgacatttta
     7501 ggattggcgt ggagtaaaat tcctacaatt tttacttctt ttgaaatttt attctctcct
     7561 atgagttgta tcgtgtcatt gattttaaga tcgttatttt tggcaaaatc ttcgcctagc
     7621 atgatttcat tgctgtcatc tttagcccat ttgccttgca ctttcaaata aggataaaga
     7681 cttttaatac ctgtgataaa atcatcatca tcttttattt caatcgcttt ttgaaaataa
     7741 gtaccataaa ggagtatttt ttttgaggaa ttattgcttt ttatttctat ctttccttct
     7801 aaaaaaggag caaaggctgt gatattgttt cgccaataaa tatcttttag catatataaa
     7861 tttttttctt ctaaatagtt tttatttttt aaaggttcgt aaagctcatt gcctatttct
     7921 atgctaaggc ttgagccttt aggcaaaacc agtatattag atccataact tttaagttgc
     7981 ttagttactt catcgcctat acttagagtg atatttaaca ttgtacatag caaaagcgta
     8041 gccaaaaaac aagtaagaaa agctagaaat ttttgaattt tatttctaaa gatagaatga
     8101 gttatcattt taactagcat tatttctcct ttggattaaa aataaagctt ctgtatcttc
     8161 tacatatttc ataggatctt tcttaaattc ctcatagttt ttttcatttg aaaaataata
     8221 agttatacct ttatagctgt aagaaaaagg tgcttgagtg ttaatgatct tatcttttga
     8281 aacaggatct tgcacttgta tatctttaat ttgactaaaa taattagatc ctgctacaac
     8341 atctttaaca tctatggtga ttttttcacc atcataatcg tattttaatg ggataggatt
     8401 gcaaccccct gtttttccta cactcggtag aaaaattcgc acattgcacg aaatgcaaat
     8461 taattcccct tcttttttaa tataacccat atccccacaa atagcacaag catcaaaaac
     8521 agccacagga gaatccctat cttctctttt attgatgagg aaaaacctta tcactttgcc
     8581 ttgctcgctt atataagcaa aacgatgaag tttgttatct cttaaaagcg ctacatcaaa
     8641 gataaatttg ccatttttat caggtaaaag ttctgtaggc ttgtctatgc ttaagggttt
     8701 agaacttatc ataaaaaagt ataagatgat acaaaaactc aaaatacaag agataaaaac
     8761 actagaaaaa tagcgattta tgagagtatt ttttgcttca tttttgcggt aaacaatatc
     8821 taaaatttgc ttttttacaa tatttttttt gcgaatttgc aaacttaaaa atgctaaaaa
     8881 aatgatgaaa aataaataaa cataaattcc aaaaacacca aaataattac tttttccaac
     8941 aaaacttact aaaaaagtat gagtttctat gaaagaattt cgcatcagtg taagcaatat
     9001 atttgctaaa accttatctc cttctataaa aataaggatt aaaaaaagta taaaacttgc
     9061 ttttttgttg atattctttt gccactttaa aaagaagaaa attaaaatac aaattaataa
     9121 agctaaagca ataaaaccta aagaagaaat ggcttcgcta tcgattaaaa caccattaaa
     9181 tataggaaaa tcttgagtta aattataata atgcaaagct atgcaaaaac tcaaatttcc
     9241 tagtaaaata aaacttaaaa tttctatttt ttgccaaaaa taaaacacaa aactcaaaag
     9301 caaacaggct ataaaaataa aattgaaatt aaatatcaaa ttctcagttt ttagaaattg
     9361 tgctgcaata aaaaaagcaa aatatccaaa taaaaagcct aaaaaaagag ctaaaaagct
     9421 tttaaaaata tatcttttat cgggcgtaat aaaagccatt aaaatactta agggcaagat
     9481 actagaaaga aaatgcacaa aatatatact cataatttac tctttaaaca ttgttatttt
     9541 gattttaaaa taaaaataaa aatatttaaa cactcggaaa atccgagtgt aaaatcattt
     9601 tggcgtgcct gtgtatttga atttataatc tactttaaaa ggttcaaacc acttacccac
     9661 acctgtttct tcatcaacat ggcgtccaaa accttgtttt tctggatttg agatataaaa
     9721 agtaagttca taatttccta cgccaaagcc acctttttta tctttttcca tagcaatatt
     9781 tgcaccatag tgaggaccat catcagccac cataggcatc aaagttccac gtttaattgc
     9841 acctgtgtcg gtatttttaa gttcataagc tatagttaaa taaggcatcc aaaaaccttc
     9901 tggaaaacca tttggattgt ttttaagtgc gtgaatgtca gcttctaggt gaatatctgc
     9961 taaagatgca gctaaatcaa tacctcttgg ctccatttca ataggttgta aataaacagc
    10021 ggctatttcc atgccattaa gttcttttgg atcgccaatt ggcacttcgc ctgcaaataa
    10081 atttgtacta ataaccgcag ctgcagcaac tactgataaa acttttttta tcatgatttt
    10141 actccttttt ttgaaatttg ttttgttatt aaaatgccaa taattagcat aattaaaact
    10201 gtaaattgag ggattaaagt ctcatagtaa ggataaattc caagccataa aatcggttca
    10261 aaattcatag gtataagact aggaatgatg acttttcctt ctatgagttc ggctatgcct
    10321 ttgcctgtaa aaacaaaaac catgtaaaaa ataatgtaag aagtgatata gaaaaattgt
    10381 tttacaggta tgcgaatggc tcctgctttt aaaagaaaat ataaaacaat aagtattaaa
    10441 attccaagtc caagtccgcc aaaaacagca ccaaaatcag tgcttgtttt agcatcaaaa
    10501 agcaaggctt gataaaaaag cacagtttct gcaccttctc tataaacagc taaaaatacg
    10561 gtaatccaaa gggtttttgc gctattattt gatatagcat ctatagcacc ttgtttgata
    10621 aagcttgtcc attttttatt ttgtgcgttt gaaagtagcc aaaagcccac ataaaagagt
    10681 agtaatacgg ctacaagcat ggtaatacct tctataagct ctctactttg acctgcattt
    10741 tctttaaata gccaagaaac tccaaaagcg gtaataaaac ttaaaatcac tcctgtaaaa
    10801 agagcactat aggcgatatt tagacgattt ttgttgccac tttgcacaag ataagaaaca
    10861 atggctacaa tgataatcaa agcttccaag ccttcacgca aaataatacc taaagcccat
    10921 ataaacagcg aataaggagt agaatcttga attttatcca cgctgctggc tatgagttgt
    10981 tctaagtcat taaaagtagc ttcaagctct tttttatctg tacttgcttt gataagagct
    11041 acgcttttgg aaaataaact ttcgatttta agttttaagc cactatctac agcaccgatt
    11101 ttattttcca tcccacttgc ttcaaaaata tctagataaa ttccttgtaa atcatctact
    11161 atagaagcac taaagccatc ataatttttt aaaatttcat ctaaagcaag tttgatatca
    11221 ttagaaactt tggcataatc tttgcctttt gtttcatcat taaagcctga aatttgcaaa
    11281 cttgaaagtt ctgaatttgg aatttgtaag aaaacatcaa aaatttgttc ttctatatta
    11341 tctaagccat ctcttaagcc tttttcatct atttttgcat cgttgatttg gcgtataagg
    11401 gtgcgtatgg cttgttgaat tttttgatcg tttcctgctt tggtaaattt atttactaaa
    11461 atttctactt tggtattgcg ataatcacta aataaggcat catttaaaaa atctttacta
    11521 gcttggtagt ttttttcttt aaaagcatta gcagcctgtg aaaatttggt agagatatta
    11581 tctagtataa attgcaatct tgcgtccatt gcagcggcag cttgtaaatc attatttata
    11641 ctatcattta tagtttcgtt ttgggtacta gaagaagaat tagtttttgc taaatcattt
    11701 ttatcaatac ccatcatttg ggcaatcaaa gcttctgctt ctgcttcacg cttggcattg
    11761 gcttgtatgc ttgatttttc agctgctgct ttatcgtaat ttgtatcact tgcttctgct
    11821 tgtaagcgat aaccattttg caaaatcggt gcaacttcat ctaaatcata ataaagactt
    11881 tcaattaaag catcaatttg ctctatgggc gctttatctt tatacaagcg acgcaaattt
    11941 gtaaattttc tttccatggt gatggctttt ttgcctatat ttcttccaat ggaaccttcc
    12001 atattttcaa agtgttgaaa ataagcatct tcactaagtt ttttagcctt taaattatcg
    12061 cccttttcat agctttttat actctcttct aatatatttt taatagtatt agcttctgct
    12121 acataatcat caactctagc aaaaacagaa tttgctagaa agagcataga gaaaaaaaac
    12181 aaaattttaa aaaatttcat
//
LOCUS       DBBXOW010000056        12124 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.057, whole genome shotgun sequence.
ACCESSION   DBBXOW010000056 DBBXOW010000000
VERSION     DBBXOW010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12124
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.057"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            46..816
                     /locus_tag="ACJE1S_001421"
     CDS             46..816
                     /locus_tag="ACJE1S_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HGG0806960.1"
                     /translation="MFKVDLNSDLGESFGVYKMGMDEEILKFVSSANVACGFHAGDPC
                     VMDKTLNLAKQNNVCIGAHPSYPDLLGFGRRNMQVSFEEAKNYALYQLGALFAFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDDGIIFLGLSNSAMEEVAKKKGLK
                     YANEVFADRAYNDDGTLVSRKLEGAVITDEDLAIKRVIKIIKESKVTSINGKEVDLKA
                     DSICVHGDGIKALEFVKKIKENLTKEQIQIKALNDFIN"
     gene            838..2007
                     /locus_tag="ACJE1S_001422"
     CDS             838..2007
                     /locus_tag="ACJE1S_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG0806961.1"
                     /translation="MINKTALLGAAFLMATSAIGPGFLTQTATFTGSLLASFGFVILV
                     SIILDIGAQLNIWRIIGISGKRGTEVANMVLPNLGYFVAFLIALGGFFFNIGNIAGAG
                     LGLNIVLGISVENAAVISAIIAIGIFIFKKAGELMDKFIVLAGFVMIVLTAYVAFASK
                     PPIGEALFRTFIPTQIDVISIVTLVGGTVGGYIVFSGAHRLIDAKLYGKENLNYINKA
                     AVSGIIITGIMRVILFLAVLGVVSSGFILDKENPAGSVFHHALGDLGLKIFGVVLFLA
                     AISSVIGAAYTSVSFIRSFHPWIEKYNRFVVIFFIIVSTLVFYILGKSPASILIIVGT
                     INGWILPITLFIMIIAAHKKSVVGDYKHPKWMSAFGLLIVALMSYLSVLSMIKLM"
     gene            2009..2749
                     /gene="pxpB"
                     /locus_tag="ACJE1S_001423"
     CDS             2009..2749
                     /gene="pxpB"
                     /locus_tag="ACJE1S_001423"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HGG0806962.1"
                     /translation="MFSVHFSGSKAVLLRFKQEISPQINALVLSTEARIQKGINENEI
                     YGIDELVSAYSSLLIYFNPCVLSLNSLLDFLEKIKKDIKITEKKSNLCIKVPLCYDEE
                     FGLDLEFVCKYHNLSKEELINLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLASPR
                     TKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFNKEDEKNPTLLKAGMLLKFKA
                     ISKDEFYDIKEQVLKKAYQKEIYEYKSH"
     gene            2730..3695
                     /locus_tag="ACJE1S_001424"
     CDS             2730..3695
                     /locus_tag="ACJE1S_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HGG0806963.1"
                     /translation="MSIKVIEASINSTIQDLGRKNYAKLGIARSGVMDELSLRIANIL
                     LGNKQDEAGLELCLKGGKYEFLDESYFVLSGAEFEAKLNNKKIQTCKVYQAKKGDILE
                     LGLAKIGFRGYLCVAGGFKIKSFLNSKSSDVKMGVGVFNGRALQKDDVLELNNSFIPF
                     NLSKRECENPVFQFAKEPTIRVILGTNDDAFTQNGLNTFLNTSYKIGLKSDRMAIYAE
                     AKTTIEHKNSADIISDPAVFGSIQVPKNGLPIILMAGRQSTGGYTKIASVIENDLPLL
                     AQAKLGTNFKFENISMQNALELYKQREEKFKTLDKKINLDFENLI"
     gene            3704..4468
                     /locus_tag="ACJE1S_001425"
     CDS             3704..4468
                     /locus_tag="ACJE1S_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012856140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HGG0806964.1"
                     /translation="MNPKELREKIAKGEIKEQTSGMALGYAQANLVILPKEYAKDFQT
                     FCMLNPKPCPLLEIVHGKFTQKIAKNANIYTDIPKYFIYENGIKTKEAYDISEYYNDD
                     LIGFLLGCSFSFEEALLEKGLEIRHISNKCNVPMYKTNIACKSVGVFSGEMVVSMRPF
                     TPDNAKKAKEITANFPLVHGAPVQIGNAKEIGINNILKADFGDDPIIKEGEIPVFWAC
                     GVTPQNVIIKAKLPFVITHAPGHMFISDILNSSLKS"
     gene            complement(4465..5364)
                     /locus_tag="ACJE1S_001426"
     CDS             complement(4465..5364)
                     /locus_tag="ACJE1S_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG0806965.1"
                     /translation="MDRSKYLFILLVIAMFLWGSSWPTSKILANYTDTSIITFWRFFF
                     VVLGSFFVLSFLKIPFRLEKNALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFVIAIFFQKDKKSTHKITKSEILGLFLGLISGLCLLNLGSMEELLGKFN
                     ALFLSCAFIWALMAVFTHKAKGTHPLAINFYINLMSLLMFSWVLFDLKSYEIFQFDFK
                     FWINLFVVAFLSTVVGTSIYYYGIHILGSVKANSFVLITPASALICSFFILDEVPTIL
                     TLIGCVLAIFAIYFINIYGKKKS"
     gene            complement(5498..6079)
                     /locus_tag="ACJE1S_001427"
     CDS             complement(5498..6079)
                     /locus_tag="ACJE1S_001427"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG0806966.1"
                     /translation="MKNILLLNGAKSFGHSGGKLNDTLHEVAKESLLNLGLKVDETYI
                     DKGYDIENEVAKILNADAIIYQMPGWWMGEPWIVKKYIDEVFTAGHGKFYANDGRSRE
                     DASKKYGSGGLVNNKKYMFSLTWNAPLEAFNDKDQFFEGVGVDGVYLHLHKANQFLGM
                     KPLPTFICNDVMKNPQVEKYIEDYKAHLQKVFS"
     gene            complement(6096..7286)
                     /locus_tag="ACJE1S_001428"
     CDS             complement(6096..7286)
                     /locus_tag="ACJE1S_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0806967.1"
                     /translation="MQQSSITINNTYQIKILITLCLGVFGLISMELGVMGIIPLISEK
                     FGVSVSDAGWSVSIFALIVMCCAPIAPMLCANFNPKKLMLFCLAIFSLSSLASMFVND
                     FWLHLILRAIPAFFHPIYLALAFSTAANLADDKSKVPHIVAKIFMAISAGLVLGVPLS
                     SYFGGNFSFEMAMAFYVVINSLAFFITLFFMPEFKKTSRIKVGKQLLSLRYALLWISM
                     LAVFCISTGYLGFYSYYSEFLFSVSKMSFTNISLALFIYGFASIIGNNIAGKTLVNHS
                     NQTLIFASMAMILIYALIFVNAAQFAIMLTLSLILGIVNGAMNNAMHYIITFPFPRAK
                     DFTNGLFISVSNISISVGATLCGLVISIKETKYIAISSIIMVGLGLILVLVRMRLEDK
                     KLKI"
     gene            7410..7862
                     /locus_tag="ACJE1S_001429"
     CDS             7410..7862
                     /locus_tag="ACJE1S_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HGG0806968.1"
                     /translation="MIELIGDVNLEKYMGTWLEMARKPAFFQKSCVQSKAEYQLEYEG
                     STPVVNIKNICVKKDGEVSQVQGKAKVKSPRALSVKFSIFMNLFNKTNYEILFIDTNY
                     EVAVVGSPDKEYLWILSRKIIDKKEIDKLLDIAKQKGFDISDIVFDKY"
     gene            complement(7863..8942)
                     /locus_tag="ACJE1S_001430"
     CDS             complement(7863..8942)
                     /locus_tag="ACJE1S_001430"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HGG0806969.1"
                     /translation="MDSKIFLENGRIQSKGYAMLSKDAKFTPFEFTRHAVGDNDILIK
                     ILYAGICHSDIHTARSEWGEAVYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVN
                     SCGECEACKKSQEQFCEKGQTIYTYNSCDIFHDNENTYGGYSNNIVVSEKFAVCVPKD
                     APMEKVAPLLCAGITTYSPLKFSNIKAGSSVAVAGFGGLGMMAVKYAVKMGAKVSVFA
                     RNENKKADALAMGVSSFYTSTDKNAVKERFDLIISTIPTPYDPSAYMDLLKFGGEMAI
                     VGLPPHEVAPSISVITFVHKAGKKVYGSLIGGIAETQEMLDFSLKHKIYPETELITSK
                     DIDKAYENLTSGKAKFRYVIDMRDE"
     gene            9076..11394
                     /gene="hsdR"
                     /locus_tag="ACJE1S_001431"
     CDS             9076..11394
                     /gene="hsdR"
                     /locus_tag="ACJE1S_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0015666 - restriction
                     endodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EcoAI/FtnUII family type I restriction enzme
                     subunit R"
                     /protein_id="HGG0806970.1"
                     /translation="MQNLYSEDDTRVKLIDAKLYASSWGEENIIRNYYFTDGRKLIGN
                     KRAERKFADYLLKFQNNNLAIIEAKKQNKDALDGLSQGIEYAKTLNVPFVYSTNGDKI
                     YEYDLRVSRGEYIENFPSPNELFQRVYGNLKEWQYKLLTQRELYIPQKTLRYYQKIAV
                     DKVIEALINGKDRILLTLATGTGKTTIAFALCYRLLEARWNKENKDQKPKILFLCDRV
                     SLRDQALGEFNAVESDCKVISAEEIRKNDGKIITNANVFFGIYQSLAANSKDQENTQE
                     EQESKFYLQYPKDFFDLIIIDECHRGGANEEGNWACVLEHFSSATHLGLTATPKKSDN
                     VDTYRYFGESAYEYSLKEGIEDGFLTPYKVKRITTTLSEGYVYNPDDLIEGELEKGFY
                     KMSEFERNIHLPQYNDFLAKEILKLIDPMDKTIIFCANQAHASDIKRAIDKFKSVKRD
                     DYCVRVTSDEGKIGLEYLKQFQDNDKSYPVILTSSKMLTTGVDARNVRNIVLLANIGS
                     IIEFKQIIGRGTRVYEGKDFFTIIDFVGATKLFYDPKWDGEQIKDEDKEDKREIWGKQ
                     NKKESDNTKETESKKAITVHLKGTKLEVLDINTSYLGSSGKPLSTKEFLEFLIGKLAG
                     YYDDEVKLREIWSKQETRLNFLKTLEKDGVDENALKDLGEIFDKKDCDIYDVLAHLSF
                     NAEIKTRQERVLQVEKSEFLKRFQKEKALKFIEFLLGRYQQYGIKDFDDGLKPLIELS
                     SLGNVKEIVSEFGGVENLKQSVDDLQREIYAR"
     gene            11384..>12124
                     /locus_tag="ACJE1S_001432"
     CDS             11384..>12124
                     /locus_tag="ACJE1S_001432"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-directed DNA polymerase"
                     /protein_id="HGG0806971.1"
                     /translation="MQDKDNIKTYYECLKELSKEELYEGLLGYGMFADRIPNFLTSEY
                     FFEFCKSNKPSFEQKEYRYIKYESMRNINVPRVLSIPNPFAYYKQCKILKEYWKKLQR
                     YFYKKTKSNKYKISRIHIRKLYEKKLIDNKYYDVEIEKIFIMNFKNYKLDGTPEQEIF
                     IGKGYKVNADISNCFPSIYTHSIPWVLIGKIGAKKNKGFTKLYYNKIDNATQWLNYGE
                     THGILIGPHSSNLISEIILVAVDYKLSKK"
BASE COUNT         4441 a         1905 c         2065 g         3713 t
ORIGIN      
        1 agatacaata aaagttaaga ttatattaaa caaataaggt aaaaaatgtt taaagtagat
       61 ttaaatagtg atctaggaga aagctttggc gtctataaaa tgggtatgga tgaagaaatt
      121 ttaaaatttg ttagctctgc aaatgtcgct tgtggctttc atgcgggcga tccttgtgtg
      181 atggataaaa ccttaaactt agccaagcaa aataatgttt gtataggagc acatccctct
      241 taccctgatc ttttaggttt tggaagacgc aatatgcaag taagctttga agaagctaaa
      301 aattatgctt tatatcaatt gggagcttta tttgcttttg ccaaagccaa aggtatgaaa
      361 atacaacatt ttaaagccca tggtgcactt tataatatgg ctgcaataga tgaaaatcta
      421 gctctagcac tttgtgaagc agtggctagt tttgatgatg gtattatttt tctagggctt
      481 agtaattctg ctatggaaga agttgcaaag aaaaagggat taaaatacgc aaacgaagtt
      541 tttgcagatc gcgcttataa tgatgatggt actttggttt caagaaaact tgaaggtgca
      601 gttatcacag atgaagattt agcgataaaa cgcgtgataa aaataataaa agaaagcaaa
      661 gttacaagca taaatggcaa agaagtggat ttaaaagctg atagtatttg cgtgcatgga
      721 gatggtataa aagcattaga atttgttaaa aaaatcaaag aaaatttaac aaaagaacaa
      781 attcaaataa aagccttaaa tgattttata aattaaaaac tataagaaag gataaaaatg
      841 ataaacaaaa ccgctctttt gggcgctgct tttttgatgg caacctctgc tattggccct
      901 ggatttttaa cccaaacagc aacatttaca ggaagcttat tggctagttt tggttttgta
      961 atacttgttt ctattatttt ggatatagga gcacagctta atatttggcg cattataggg
     1021 ataagtggaa aaagaggaac tgaagtagcc aatatggttt tacccaattt gggctatttt
     1081 gtagcttttt taattgcact aggtggcttt ttcttcaata taggaaacat agcaggagct
     1141 gggcttggat taaatatagt attaggtatt agcgtagaaa atgcagcagt tattagcgct
     1201 attatcgcta ttggtatttt tatctttaaa aaagctgggg aattgatgga taaattcatc
     1261 gttttagcag gttttgtgat gattgtactt actgcttatg tagcctttgc ttcaaaacct
     1321 cccattggtg aagctctttt tagaaccttt atacctacac aaattgatgt tatttctata
     1381 gtaaccttag taggcggaac agtgggtgga tatatagtat tttcaggcgc gcacagactt
     1441 atagatgcaa agctttatgg aaaagaaaat ttaaactata ttaataaagc tgcagtaagc
     1501 ggaatcatca tcacaggaat catgcgtgtg attttgtttt tagcagtttt aggagtagtt
     1561 agttctggtt ttatactgga taaagaaaat cctgctggtt cagtatttca tcatgcttta
     1621 ggggatttgg gcttaaaaat ctttggcgta gtactatttt tagctgctat ttcatcagtt
     1681 atcggggctg cttacacttc tgtatctttt ataagatcct ttcacccttg gattgaaaaa
     1741 tataaccgct ttgtggtaat ttttttcatt attgtttcaa ctttagtttt ttatatactt
     1801 ggaaaatctc ctgcaagtat attaatcatc gttgggacga tcaatggttg gattttgcct
     1861 attaccctat ttataatgat aattgcagcg cataaaaaaa gcgtagttgg agactataaa
     1921 catcctaaat ggatgagtgc ttttggactt ttgatcgtag ctttgatgtc ttatttatct
     1981 gtactttcta tgataaagtt aatgtaaaat gtttagcgta cattttagtg gaagtaaagc
     2041 ggtgcttttg cgctttaaac aagaaatttc acctcaaatt aatgctttgg ttttaagtac
     2101 agaagctaga attcaaaaag gcataaatga aaatgaaatt tatggcatag atgagcttgt
     2161 aagtgcttat tctagcttgc ttatttattt taatccttgc gtattatcct taaattcttt
     2221 acttgatttt ttggaaaaaa tcaaaaagga tattaaaata acggagaaaa aatccaatct
     2281 ctgtattaaa gttccacttt gttatgatga agaatttggg cttgatttag aatttgtatg
     2341 caaatatcac aatctttcca aggaagaatt gataaatctt cacacaaaac cctattatct
     2401 tgtttttatg ctaggattta tggcaggttt tccctatctt ggaggacttg atgaaagact
     2461 ttttacccca agacttgcaa gccctagaac taaaattgag gcaggaagtg taggtattgc
     2521 cgataagcaa acaggagttt atccgatttc aagcccaggc ggttggcaaa tcattgctag
     2581 aactcctttg gaatttttta acaaagagga tgagaaaaat cctacacttt taaaagcggg
     2641 aatgctttta aaatttaagg ccatttcaaa agatgaattt tacgatatta aagaacaagt
     2701 tttaaaaaag gcttatcaaa aggaaattta tgagtataaa agtcattgaa gcttctataa
     2761 attccaccat acaagatctt gggcgtaaaa attatgctaa attaggcata gcaagaagcg
     2821 gtgtgatgga tgaactttct ttaaggattg caaatatctt acttggaaat aaacaagatg
     2881 aagcaggact tgagctttgt ttaaagggtg gaaaatacga atttttagat gaaagctatt
     2941 ttgtattaag cggggcagaa tttgaagcta aattaaataa taaaaaaatt caaacttgca
     3001 aagtttatca agcaaaaaag ggtgatattt tagaacttgg tttagcaaaa ataggttttc
     3061 gaggctatct atgcgtagcg ggtggattta agataaaaag ctttttaaat tcaaaatcaa
     3121 gcgatgtaaa aatgggtgtt ggggtattta atggaagagc tttgcaaaag gatgatgtat
     3181 tagaactaaa taacagcttt atccccttta atctatcaaa aagagaatgc gaaaatcctg
     3241 tttttcaatt tgctaaagaa cccactatcc gtgttatttt aggcacaaat gatgatgctt
     3301 ttacgcaaaa tggcttaaat acctttttaa atactagtta taaaataggc ttaaaaagcg
     3361 atagaatggc aatttatgca gaagctaaaa ctacgataga acataaaaat tcagccgata
     3421 ttatttcaga tcctgcggtt tttggaagta ttcaagtgcc aaaaaatggc ctacctatca
     3481 ttttaatggc aggaagacaa agcactggag gttatacaaa aatagcctct gttatagaaa
     3541 atgacttgcc tttgcttgca caagcgaaat taggaacaaa ttttaaattt gaaaacatta
     3601 gcatgcaaaa tgctttagaa ctttataagc aaagggaaga aaaatttaag actttggata
     3661 aaaaaatcaa tcttgatttt gaaaatttga tttaaggata aagatgaatc caaaagaact
     3721 aagagaaaaa atcgcaaaag gtgagataaa agaacaaact tcaggcatgg ccttaggcta
     3781 cgcacaagca aatttggtga ttttacccaa agaatacgct aaagactttc aaaccttttg
     3841 catgcttaat ccaaaaccct gcccactttt agaaatagta catggtaaat ttactcaaaa
     3901 aattgccaaa aatgcaaata tttacaccga tattccaaaa tattttatct atgaaaatgg
     3961 gataaaaact aaagaagctt acgatataag cgagtattat aacgatgatt tgataggttt
     4021 tttactgggt tgtagctttt cttttgaaga agctttactt gaaaaaggct tagaaataag
     4081 acatattagc aataaatgca atgtgccaat gtataaaacc aatattgctt gcaaaagtgt
     4141 aggagttttt agcggtgaaa tggttgtttc catgcgtccc tttactcctg ataatgccaa
     4201 aaaagctaaa gaaatcactg ctaattttcc tttggttcac ggagctcctg tgcaaattgg
     4261 caatgctaag gaaattggta taaataatat tttaaaagct gattttggtg atgatcctat
     4321 tataaaagaa ggcgaaattc ctgtattttg ggcttgcgga gtaactccac aaaatgtgat
     4381 aataaaagca aaattgcctt ttgtgattac ccatgcgcca gggcatatgt ttataagcga
     4441 tattttaaat tcatctttaa aatcttagga ttttttcttg ccataaatat tgataaaata
     4501 tatagcaaaa atcgctaaaa cacagcctat taaagtaagt atagtaggca cttcatctaa
     4561 gataaaaaag ctacaaatca aagcacttgc aggagtgatt aaaacaaaag aatttgcttt
     4621 tacacttcct aaaatatgaa ttccataata atatatactc gtacctacca ccgtagataa
     4681 aaaagccacc acaaaaagat tgatccaaaa tttaaaatca aattgaaaga tctcataact
     4741 tttaagatca aacaacaccc atgaaaacat caataatgac ataagattga tataaaaatt
     4801 gatcgccaaa ggatgagttc cttttgcttt atgagtaaaa acagccatta aagcccatat
     4861 aaaagcacag cttaaaaaca aagcattaaa cttacccaaa agctcttcca tagagcctaa
     4921 atttagcaaa caaagccctg aaatcaaacc caaaaataag cctagaattt cactctttgt
     4981 gatcttgtga gttgattttt tatctttttg aaagaatatc gctatcacaa atatcaaata
     5041 agaaaatata gggatcatag tggttactaa aacccctcct ttacctgcta aaccatgctt
     5101 tatagcgata aaaaatacaa aggcataaag tccatttaaa actcctgcta tcaagaccca
     5161 ttttaaagca tttttttcaa gtctaaaagg aatttttaaa aagcttaaaa caaaaaatga
     5221 acccaataca acaaagaaaa aacgccagaa ggtaataata gaagtatctg tatagttcgc
     5281 caaaatctta gatgtcggcc atgaagaacc ccataaaaac atagcaataa caagcaagat
     5341 aaataaatat tttgaacgat ccatttatac tacctttgaa ataaataaga atgtttttat
     5401 gatatcaaaa tgctaggtta aataataacc cagcatgaat taatgtttat ttaaaatcat
     5461 ctatgaaatg gtgcaaattt tacatttgct atttagctta gctaaacact ttttgcaaat
     5521 gcgctttata atcctcgatg tatttttcta cttgtggatt tttcatcaca tcattgcaaa
     5581 taaaagtcgg caaaggcttc atacctaaaa actgatttgc tttgtgtaaa tgcaaataca
     5641 ctccatctac gcccacacct tcaaaaaact gatctttatc attaaaggct tcaagtggtg
     5701 cattccaagt aaggctaaac atatattttt tattatttac aagtccgccg ctgccatatt
     5761 ttttacttgc atcttctcta cttctaccat cgtttgcata aaattttcca tgccctgcag
     5821 taaaaacctc atcaatgtat tttttcacta tccaaggctc acccatccac catcctggca
     5881 tttgatagat gatcgcatca gcattaagta tctttgcaac ttcattttct atatcatatc
     5941 ccttatcgat ataggtttca tcgaccttta atcccaaatt caaaaggctt tcttttgcta
     6001 cttcatgcaa agtatcattt agcttaccgc ctgaatgtcc gaaacttttt gctccattta
     6061 ataaaagtat atttttcatc ttttctcctt tataattaaa tttttaattt tttatcttct
     6121 aatctcattc taaccaatac caaaataagc cctaagccca ccatgatgat agaacttatc
     6181 gcaatgtatt tagtttcttt tatagaaatg actaagccac aaagagtagc acctacgctg
     6241 atagaaatat ttgaaacact tataaaaagc ccattggtaa aatcttttgc cctagggaaa
     6301 ggaaaagtga tgatataatg cattgcatta ttcatagccc catttacaat tcccaaaatc
     6361 aaacttaatg taagcatgat tgcaaattgc gctgcattta caaaaatcaa agcatatatc
     6421 aaaatcattg ccatagaagc aaatataagc gtttgatttg agtgattgac taaagttttt
     6481 cctgcgatat tattaccaat aatacttgca aaaccataaa taaaaagtgc taaactgata
     6541 tttgtaaagc tcattttact cacgctaaat aaaaattcag aataataaga ataaaatcct
     6601 aaatatccag tcgaaataca aaaaacagca agcatagaaa tccacaaaag cgcatatctt
     6661 agacttaaaa gctgttttcc tacctttatc ctacttgtct ttttaaattc aggcataaaa
     6721 aacaaagtga taaaaaacgc taaagaattg atcaccacat aaaaagccat cgccatttca
     6781 aagctaaaat tcccaccaaa ataactacta aggggcacac caagaaccaa acctgcgcta
     6841 atagccataa aaatctttgc gactatatgg ggtactttac ttttatcatc tgctaaattt
     6901 gcggctgtgc taaaagcaag tgcaagataa ataggatgaa aaaaagcagg gatagctctt
     6961 aagatcaaat gaagccaaaa atcatttaca aacatgcttg ccaaagagct aagagaaaaa
     7021 atagccaagc aaaataacat aagcttttta ggattaaaat tcgcacaaag cataggtgct
     7081 ataggcgcac agcacattac aataagtgca aatatactca cactccaccc cgcatcacta
     7141 acactcacgc caaatttctc cgatataagc ggtatgatcc ccatcacccc aagctccata
     7201 ctgataagcc caaacacacc tagacaaagc gtgattaaga tcttgatttg ataagtattg
     7261 tttatagtta tacttgattg ttgcattaaa aaaacctttt tcgaaaaatt aaactcgcaa
     7321 ttttaattta tgcaagttat aatgtcaata cataaagtga tgatttaatc agatataaag
     7381 aatatttcaa aaaacaaaag gaggatatca tgatagaact tataggagat gttaatttag
     7441 aaaaatatat gggaacttgg cttgaaatgg ctagaaaacc tgcatttttt caaaaatctt
     7501 gcgttcagtc taaagctgaa tatcaactag aatacgaagg ctctacccct gttgtaaata
     7561 taaaaaatat ctgtgttaaa aaagatggag aggtttcgca agtacaaggc aaagccaaag
     7621 taaaatcccc aagagcttta tcggtgaaat ttagcatttt tatgaattta tttaataaaa
     7681 caaattatga aattctcttt atagacacaa actatgaagt cgctgtcgtt ggaagtcctg
     7741 ataaagagta tctttggatt ttatctagaa aaatcatcga taaaaaagag atagataaac
     7801 ttttagatat cgctaagcaa aaaggttttg acattagcga tatagttttt gataagtatt
     7861 aattactcat ctctcatatc gatcacatag cggaattttg cttttcctga agtgagattt
     7921 tcataagctt tgtcgatatc ttttgaagtg atgagttcgg tttcagggta aattttatgc
     7981 tttaaagaaa aatcaagcat ttcttgagtt tctgcgattc cgccgattag tgaaccatag
     8041 acttttttac ccgctttatg cacaaaggtt atcacgctga tacttggagc aacttcgtga
     8101 ggtggcaagc ccactatcgc catttcaccg ccaaatttaa gcaaatccat ataagcacta
     8161 ggatcataag gagttgggat ggtagaaatg ataagatcaa agcgttcttt tacagcattt
     8221 ttatctgtgc ttgtataaaa agaactcacg cccatagcca aagcatcggc ttttttgttt
     8281 tcatttctag caaaaacact tacttttgca cccattttca cagcatattt aaccgccatc
     8341 ataccaagtc cgccaaatcc cgctaccgct acgcttgagc cagctttaat gtttgaaaat
     8401 ttaagcggag aataagtggt aattcctgca caaagcaaag gcgcgacttt ttccatcggt
     8461 gcatcttttg gcacacaaac agcaaatttt tcacttacga ctatgttgtt tgagtagcct
     8521 ccataggtgt tttcattatc atgaaaaata tcgcagctat tgtaagtata gatggtttgt
     8581 cctttttcgc aaaattgctc ttgggacttt ttacatgctt cgcattctcc gcatgaattt
     8641 accatacagc caacccctgc ataatcccct actttaaatt tgctcacatt tttacccact
     8701 gcgatcactt ctcctgctat ctcatgccct ggcacacaag gatacacagc ttctccccac
     8761 tcgcttcttg cagtgtggat gtcgctatga caaattcctg cgtataaaat tttaatcaaa
     8821 atatcattat cacccacagc gtggcgtgtg aattcaaagg gtgtgaattt cgcatctttg
     8881 ctaagcatag catagccctt gctttgaatg cgaccatttt ctaaaaagat tttagagtcc
     8941 attttctctc cttatttttt gatttttgaa attataaaac attagagtag ctataagtca
     9001 agagggaaat taaatttttt aaaaatttat tataaatgtt ataattacaa aatttaattt
     9061 cactttgggg taaaaatgca aaatttatat tcagaagatg atacaagggt taagcttata
     9121 gacgcaaagc tttatgctag ttcttggggt gaagaaaata tcataaggaa ttattatttc
     9181 accgatggac gcaaactcat aggcaacaaa agagctgaaa gaaaatttgc agattatttg
     9241 ctcaaatttc aaaacaacaa tcttgccatc atagaagcta aaaaacaaaa caaagacgcc
     9301 ttagatggct tatctcaagg tatagaatac gctaaaactt taaatgtgcc ttttgtttat
     9361 agcactaatg gcgataaaat ttatgagtat gatttaaggg tttcaagggg tgagtatata
     9421 gaaaattttc caagccctaa cgaacttttt caaagagttt atggaaattt aaaagaatgg
     9481 caatacaaac ttttaactca aagagaatta tacatacctc aaaaaacatt aagatactac
     9541 caaaaaatag ccgtagataa agtcatagaa gctttaatca atggtaaaga tagaatttta
     9601 cttacccttg ctaccggcac aggtaagacg actatagctt ttgctttgtg ttatcgtttg
     9661 cttgaagcaa gatggaataa agaaaacaaa gaccaaaaac ctaaaatatt gtttttatgc
     9721 gatagagtga gcttaagaga tcaagctttg ggagaattta acgcagtaga aagcgattgt
     9781 aaagtaatca gcgcagaaga gattagaaaa aatgatggaa aaatcatcac caacgcaaat
     9841 gttttctttg gaatttatca aagtctagct gcaaattcta aagatcaaga aaatacccaa
     9901 gaagaacaag agagcaaatt ttatctacaa tacccaaaag atttttttga ccttatcatc
     9961 atcgatgagt gtcacagagg cggagcaaac gaagaaggaa actgggcgtg cgtactagag
    10021 cacttttcat cagctactca tttaggactt actgccacac ctaaaaagag tgataatgta
    10081 gacacttaca ggtattttgg tgaaagtgcg tatgagtata gcctaaaaga gggtatagaa
    10141 gatggatttt taacccctta taaggtaaaa cgcatcacca ccacacttag cgaaggctat
    10201 gtatataatc ctgatgatct catagaagga gagctagaaa aaggatttta taaaatgagt
    10261 gaatttgaaa gaaatatcca tctacctcaa tataatgatt ttctagctaa agaaatttta
    10321 aaacttatag atcctatgga taaaaccatc atcttttgtg ccaatcaagc tcacgcaagc
    10381 gatataaaaa gagctattga taaatttaaa agtgttaaaa gggatgatta ttgtgtaaga
    10441 gttacgagcg atgagggtaa gataggactt gaatatttaa aacaatttca agacaatgac
    10501 aaaagctatc ctgtaatcct tacaagctct aaaatgctaa ccacaggcgt agatgctaga
    10561 aatgtccgca acatagtact tttggcaaat ataggctcta tcatagaatt taaacaaatc
    10621 atagggcgag gcactagagt gtatgaagga aaagactttt ttaccatcat agattttgta
    10681 ggtgcgacaa agctatttta tgatccgaaa tgggatggcg aacaaatcaa agatgaagat
    10741 aaagaagata aaagagaaat ttggggcaag caaaataaaa aagaatcaga caacacaaaa
    10801 gaaacagaaa gcaaaaaagc aatcaccgtg catttaaaag gcacaaaact cgaagtgctt
    10861 gatataaaca caagctatct aggaagtagt ggcaaaccac ttagcactaa agaattttta
    10921 gaatttttga taggcaaact agcaggatac tacgacgatg aagtaaaact tcgtgaaatt
    10981 tggagcaaac aagaaactag gctaaatttc ttaaaaaccc ttgaaaaaga tggagtcgat
    11041 gaaaatgcct tgaaagattt gggtgaaatt tttgataaga aggattgtga tatatatgat
    11101 gttttggcgc atttgagttt taatgctgag atcaaaacaa gacaagaacg cgttttgcaa
    11161 gtagaaaaga gtgaattttt aaaacgcttc caaaaagaaa aagctctgaa attcatagaa
    11221 tttttactcg gtagatatca gcaatacggc ataaaagact ttgatgatgg cttaaaaccg
    11281 cttatagagc ttagctcttt aggtaatgta aaagaaatag tcagtgaatt tggcggagtg
    11341 gagaatttaa agcaaagtgt agacgatttg caaagggaga tttatgcaag ataaagataa
    11401 tataaagaca tattatgagt gtcttaaaga actgtctaag gaagaacttt atgaaggatt
    11461 attaggatat ggaatgtttg cagatagaat accaaatttt ttaacttctg aatatttttt
    11521 tgagttctgc aaatcaaata agccatcttt tgaacagaaa gaatacagat atattaaata
    11581 cgaaagcatg agaaatatta atgttcctag agttttatca ataccaaatc catttgcata
    11641 ttataaacaa tgtaaaattt taaaagaata ttggaaaaaa ttacaaagat atttttacaa
    11701 aaaaacaaaa agtaataaat ataagattag tcgtattcat attagaaagc tatatgaaaa
    11761 aaaacttatt gataataaat attacgatgt agaaatagaa aaaattttca ttatgaattt
    11821 taaaaactat aaacttgatg ggacgccgga acaagaaatt tttattggta aaggatataa
    11881 ggtaaatgca gatatttcaa attgctttcc tagcatatac acacactcga taccttgggt
    11941 tttaattgga aaaattggtg ctaaaaaaaa taaaggtttt acgaaattat attacaataa
    12001 gatagataat gctacacaat ggcttaatta tggagaaaca catggaatct taatagggcc
    12061 tcatagttca aacttaatct cagagattat tttggttgca gttgattata aacttagtaa
    12121 aaaa
//
LOCUS       DBBXOW010000057        11869 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.058, whole genome shotgun sequence.
ACCESSION   DBBXOW010000057 DBBXOW010000000
VERSION     DBBXOW010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11869
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.058"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            174..566
                     /locus_tag="ACJE1S_001433"
     CDS             174..566
                     /locus_tag="ACJE1S_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HGG0806972.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHNDVLEAEHGVEAWDLLEKN
                     EDIKILITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGNGDSEAE"
     gene            580..1428
                     /locus_tag="ACJE1S_001434"
     CDS             580..1428
                     /locus_tag="ACJE1S_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HGG0806973.1"
                     /translation="MQKFYYELFLEIQEQYKNLFLDFVFDLGVDAIEEKDNGIYIRSE
                     ENLEELAWAIEIFAQKLSQRFNLKENIILHKSIEKKENKDWVEEYKKGIKPILIDNIY
                     IHTTWQEEKENYLNIKINPALAFGSGHHESTYGCVKFLQKFAKNNSRSLDIGCGSGIL
                     AIVMAKLGCKVEICDTDDLAIESALDNAKLNNVNFAQAWHGSVDKAEGLYDLVVVNII
                     ADVILILEKDIKKHLEDNAILILSGILDKYKTRVKEKFQDLELIDEMQINEWCSLVYK
                     NKTKEK"
     gene            1428..3374
                     /gene="ftsH"
                     /locus_tag="ACJE1S_001435"
     CDS             1428..3374
                     /gene="ftsH"
                     /locus_tag="ACJE1S_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HGG0806974.1"
                     /translation="MNNNNNAPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIVFKGFFD
                     GNGSLGGALNGTEVSKNVPYSELKKLIESGQINQVSIGQTTIKAVSSAQNTVYTTKKV
                     NDPEFVSLLDSKNIAYGAYSETNWFTDILFSWVLPIFIFFGIWMFLASRMQKNMGSSI
                     LGIGSSKKLVNSEKPKVKFNDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLL
                     VGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIV
                     FIDEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLD
                     AALLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLA
                     NIINEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINDKEKKIITYHECGHAL
                     IAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEE
                     VFIGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLTGGQTIKDYSE
                     KMAESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGAKVRDIIKSYE
                     NENNLPTRLQEINEEHKEESKQAE"
     gene            3374..3988
                     /locus_tag="ACJE1S_001436"
     CDS             3374..3988
                     /locus_tag="ACJE1S_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HGG0806975.1"
                     /translation="MGKYIAKEGHWFIAIVFILFVICWIFYSFSVLLFLFLLVLLFIF
                     RIPNRVRVCNDSKAILSPIDGRITRIENTFDKYLGESVEISIKNAFYDAGAFYTPFKM
                     DINDIALKHGLFLCSELKSARIMNENVSIFASSNGSNVVLRIYAGSFDRKLKLDNLSH
                     SLTVGDKMGFLINGTISILLPRDTRIHVGLGDELKSGSLLGYLA"
     gene            3998..4723
                     /gene="pssA"
                     /locus_tag="ACJE1S_001437"
     CDS             3998..4723
                     /gene="pssA"
                     /locus_tag="ACJE1S_001437"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HGG0806976.1"
                     /translation="MNNNKSQFIYILPNLFTAASAFLGVISIIASIQGNYYMALFYII
                     FSLICDGLDGRVARLTKTTSKFGIEFDSLADLIAFGAAPAIFFYMVIGSEFGRYGSLI
                     TAFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYSYYYYDFLRAYGII
                     FLILQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIVFSFLYLYPLESLVILAS
                     LYVIYGIIRAIYTLIFSKFKMKA"
     gene            complement(4720..5517)
                     /locus_tag="ACJE1S_001438"
     CDS             complement(4720..5517)
                     /locus_tag="ACJE1S_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HGG0806977.1"
                     /translation="MQKEFFNELEKILYEQNLDNKFENFAIFYDDFKSQKFIFNHEQG
                     SIFKTNINPALKLLHPTRIRRPKFVNSTHSLAKIVHSIAHIEFSAINLALDASYRFKN
                     LPQQFYIDWLEVADEEIKHFKLLNAALDELGYKYGDFAIHDNLEAALEATKDCLSLRM
                     GVVHRGLEAKGLDANPFVVAKLESSNHPIKSLLKDVLHIILNDEIKHVSKGDNWWKFS
                     NQNNYDFIELCKMFNQFSLAGKKLNIEARIKAGFSKAECEAIAQFYA"
     gene            5681..6037
                     /locus_tag="ACJE1S_001439"
     CDS             5681..6037
                     /locus_tag="ACJE1S_001439"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HGG0806978.1"
                     /translation="MKKLNEEEARVILNKGTEAPFSGKYNNFYKKGIYLCKQCGSKLY
                     RSEDKFKSGCGWPSFDDEIKGAIKRLPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     IRHCVNSISLEFVKGE"
     gene            6041..6679
                     /locus_tag="ACJE1S_001440"
     CDS             6041..6679
                     /locus_tag="ACJE1S_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HGG0806979.1"
                     /translation="MFSNVGSELYLMFFAGITLLAVLNPFGNLTQFLAMSDGLPLALR
                     KKLFRTILYTALAIVLAFLFSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTK
                     LATQSFDSYQEANEKEILRQSLIPMAFPMLVGPGTLASVIVISEDGGLDIAFGGVIIA
                     FIFMFALFHFAATIEKIVGKLILHVFSRIAQVFIVAMGCKMIIIGIKNIFNI"
     gene            complement(6765..7418)
                     /gene="aat"
                     /locus_tag="ACJE1S_001441"
     CDS             complement(6765..7418)
                     /gene="aat"
                     /locus_tag="ACJE1S_001441"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002836355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HGG0806980.1"
                     /translation="MESSILYSKLMDAPKDAPVFLSQKLEPDFILKAYRFGLFPWTNK
                     PVTWWCPDPRCVLNPSEIHIQKNMKKFINLYQIKLDYDFLSLIHLCRNTRPQSWIDDE
                     FIENYYELFKQGYVHTLELYEDKELIGGIYGLIIGKVFFGESMVSLRKNASKIALIKL
                     CKLLKPYDFVIDCQVYNKHLEFMGAKNIERKIFLNILKEKCDQESGFTNFSTLINQI"
     gene            complement(7393..9510)
                     /locus_tag="ACJE1S_001442"
     CDS             complement(7393..9510)
                     /locus_tag="ACJE1S_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0806981.1"
                     /translation="MKYQENLQKYLDNAKHLSTINRHEFTTCEHVLFAILKLSSDFKS
                     IFEELADAEFELLESELKNYIAEKNQSLDQEIEPVNSIVLDEILNHKNEIKIIDFLEK
                     LIQDDRTYSSFLLQKHGMNLEKIQDFKQNSEIENLNSYASDLTLLAQKGKIDPLIGRK
                     FELERIIQILSRRKKNNPILIGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDI
                     AGLLSGTKYRGDFEKRIKEVLEGLQKLPNAILFIDEIHTIVGAGATGESHTDFSNLLK
                     PALSNGTLKCIGATTFMEYKNTFDKNKALSRRFAKINVDEPSQEEAFQILQGLKSKYE
                     DFHKIKISDEVLQQAVVWGKKFFSDKYLPDSAIDLIDELGASYVLKAKTKKNADIKDL
                     EQVLAKMTHHHKMFEFDQNKALMNLSLNLKAKIFGQDEVIDKLVATLKQSFAGFKNLN
                     TPRGVFLFTGSSGVGKTELCKVLAEFLGLNLERFDMSEYAEKHSISKLIGSPAGYVGY
                     EDGGLLSNAVRKNPFSLILFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKADFKNTII
                     IMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLDDTVLVKII
                     QKELDEISKNLKNIQLVADEKAKLYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILF
                     GKLKKGGIAKIKLNKNGKLDLIF"
     gene            complement(9507..9797)
                     /locus_tag="ACJE1S_001443"
     CDS             complement(9507..9797)
                     /locus_tag="ACJE1S_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HGG0806982.1"
                     /translation="MPKLKVLEKSKLKEPKMFKVILLNDDVTTMDFVIEVLINIFYHD
                     FETANKIMLEVHLNGSGICGIYTQEIALSKQKKVSDAAKLANFPLQTRVEEE"
     gene            complement(9797..10402)
                     /locus_tag="ACJE1S_001444"
     CDS             complement(9797..10402)
                     /locus_tag="ACJE1S_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HGG0806983.1"
                     /translation="MKKKTILSFFIIIGFFISACSHQEDIQNDFMFEEYSKGDKIVLN
                     SVNGGAKTLIRTDKGFIVEGEEDKVLMIDFFGTFCAPCKEEALELSKLWKNNSNKFII
                     MGLTHFEDVSDETVKKFADDYGAYYFLSNDSQNDRIIAQILKDIDYQSMEQLPFKVVM
                     KNGIYQNLSNYWDSNTSTNFYLGKIPTDFIQDDLDKIYKEK"
     gene            complement(10412..10864)
                     /gene="smpB"
                     /locus_tag="ACJE1S_001445"
     CDS             complement(10412..10864)
                     /gene="smpB"
                     /locus_tag="ACJE1S_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HGG0806984.1"
                     /translation="MKVIARNKKALFDYSIIERFESGVVLKGSEVVALRAGRANLKDS
                     FVRIIKGELFLLNAHISHLSTTHSYYKHEERAARKLLMHRKQIDKLLGKVSIEGYTLV
                     VLELYFNHKNKVKATLALAKGKNLHDKRESLKKKQADMEARSAMKNYK"
     gene            complement(10861..11631)
                     /locus_tag="ACJE1S_001446"
     CDS             complement(10861..11631)
                     /locus_tag="ACJE1S_001446"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HGG0806985.1"
                     /translation="MKAYAKANIFLKLVGFDKRRYHLLESRFILLKNLFDEIHIVEKS
                     SNSPKGFEIISNFNCEDNIITKAYHLLCQNGYQNKLEEFFKTKSLKLIKNIPTCAGLG
                     GGSSDCASFLMLINEELNLKLSTQKLIELSTQLGSDIAFFLSGFESANVSGCGEIIEE
                     FNDTIPSLEWVFPEVSCQTKKVYDEFDKGEIDFEKNILEAKIYKDLNTKELLETFKNT
                     QLNDLFTPCVTLYPKMFLFLEQGFFLSGSGSSVFKVHQ"
     gene            complement(11628..11855)
                     /gene="csrA"
                     /locus_tag="ACJE1S_001447"
     CDS             complement(11628..11855)
                     /gene="csrA"
                     /locus_tag="ACJE1S_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HGG0806986.1"
                     /translation="MLILSRKENESIVIGEGIEIKIVQTGKGYAKIGIDAPKSLMILR
                     KELLTQIKDENLHSVVKNDVKLDDLSKKLIP"
BASE COUNT         3909 a         1709 c         1960 g         4291 t
ORIGIN      
        1 ttatgaaatt ttggattaaa aaattaaaaa acaatcattt ttataaaaaa aattaaacaa
       61 aaatatagta aaaaatgcta taattcactt ttaaaatttt ttagaaactt gattaataag
      121 gctaaaaagg atacaatata taaaatttat gaaaattttg aaaggacgaa attgtgaaat
      181 tgttagttgt tgatgacagt tctactatga gaaggattat aaaaaatacc ctaacaagac
      241 tcggacataa tgatgttctt gaagctgaac atggagttga agcttgggat ttacttgaaa
      301 aaaacgaaga tattaaaatt ctaattactg attggaatat gcctgagatg aatggcttag
      361 agcttgttaa aaaagtaaga gcagaaaaaa aatatgaaga tatgcctatt attatggtta
      421 ctaccgaagg gggcaaggct gaggtgatta ctgccttaaa agcaggggta aacaattata
      481 tagttaagcc ttttactcca caagtattaa aagaaaaact tgaagatgtt ttaggtaccg
      541 gcaacggaga ctctgaagct gagtaatttt taataattaa tgcaaaaatt ttattatgaa
      601 ctgtttcttg aaattcaaga gcagtataaa aatttatttc ttgattttgt tttcgatttg
      661 ggtgtagacg ctatagaaga aaaagataat ggtatttata tacgctcgga agaaaattta
      721 gaagagcttg cttgggcaat tgaaattttt gcccaaaaat taagtcaaag attcaattta
      781 aaagaaaata ttatacttca taaaagcatt gaaaaaaaag aaaataaaga ctgggtggaa
      841 gaatataaaa aaggaataaa gcccatttta attgataata tttatattca tactacttgg
      901 caagaagaaa aagaaaatta tcttaatatt aaaatcaatc ctgctttagc ttttggttct
      961 gggcatcatg aaagtactta tggctgtgta aaatttctac aaaaatttgc taaaaataat
     1021 tcaagatctt tagatatagg ctgtggaagc ggtatcttag ccattgttat ggcaaaatta
     1081 ggatgcaaag ttgaaatttg tgatactgat gatttggcta ttgaaagtgc cttagacaat
     1141 gcaaagttaa ataatgtaaa tttcgcacaa gcttggcatg gttctgtaga taaggcagag
     1201 ggattatatg atttggtggt tgtaaatata attgctgatg tgattttgat tttagaaaaa
     1261 gatattaaaa agcatttaga agataatgct atacttatct tatctggaat tttggataag
     1321 tataaaacaa gagtaaaaga aaaatttcag gatttagagc ttattgatga aatgcaaatc
     1381 aatgaatggt gctctttggt atataaaaat aaaacaaagg aaaaatgatg aataataaca
     1441 acaatgctcc taacaataag ggtaatccgc agggcaataa ctttttcaac aagaatccaa
     1501 tttttatttt tgcgattttt gctattgtta tgataattgt ctttaaggga ttttttgatg
     1561 gcaatggatc tttaggtggt gctttaaatg gaactgaggt tagcaaaaat gtaccttatt
     1621 ctgaactcaa aaaacttatt gaaagtggac agatcaatca agtaagtata ggacaaacta
     1681 ctataaaagc agtttctagt gctcaaaata cagtctatac tactaaaaaa gttaatgatc
     1741 ctgaatttgt aagcttgctt gatagtaaga atattgctta tggagcttat tctgaaacaa
     1801 attggtttac agatatttta ttttcttggg ttttgcctat atttattttc tttggaattt
     1861 ggatgttttt ggcaagtcgt atgcaaaaaa acatgggaag ttctatactt ggtataggca
     1921 gctctaaaaa acttgtaaat tcagaaaaac caaaagttaa atttaacgat gttgcgggcg
     1981 tagaagaggc aaaagaagaa gttaaggaaa tagtagattt tttaaaatat ccagaaagat
     2041 acattaagct tggtgcaaaa attccaaaag gtttattgct tgtaggacct ccgggcacag
     2101 gaaaaacatt attagcaaaa gcagtagcgg gtgaagctga tgtgccattt tttagcgttt
     2161 cgggttcatc ttttatagaa atgtttgtgg gtgtgggtgc ttctcgtgtg agggatttat
     2221 ttgaaaatgc aaaaaaagaa gctcctgcta ttgtttttat cgatgaaatt gatgccatag
     2281 gtaaaagtcg tgccgcaagc ggtatgatgg gtggcaatga tgaaagagaa caaactttaa
     2341 atcagctttt agctgaaatg gatggttttg ggactgaaag ttctccagta attgttttag
     2401 cagctactaa tagacctgaa gttttggatg cggccctttt aagaccggga aggtttgatc
     2461 gtcaagtttt ggttgataag cctgatttta aaggtagatg tgatatttta aaagtgcata
     2521 tgaaagatgt gaaaatttct ccaaaggtta aagtagaaga tatagcgcgt ttaaccgcag
     2581 ggcttgcggg agctgatctt gcaaatatta tcaatgaagc agcgctttta gcaggtaggg
     2641 attcgaaaaa atatgtagaa caaaatgatc ttgtagaagc tgttgaaaga gctatagctg
     2701 gccttgaaaa gaaatcacgt cgcattaacg acaaagagaa gaaaatcatt acttatcacg
     2761 aatgtggaca tgctttaatt gctgaaacta caaagggtgc aaaacgcgtt agtaaggttt
     2821 ctgtgattcc tagagggctt gctgcacttg gttatacact caatacgcct gaagaaaata
     2881 aatttttaat gcaaaagcat gagcttattg ccgaagttga tgtgcttttg ggcgggcgtg
     2941 ctgcagaaga ggtatttata ggcgaaattt ctaccggtgc aagcaatgac cttgaaagag
     3001 caacagatat tatcaaggct atgatttcaa tgtatggtat gagtgaaatt gcaggcttga
     3061 tggtgcttga aaagcaaaga aatacttttt taacaggtgg ccaaactata aaagattatt
     3121 ctgaaaaaat ggctgaatct ttagatgatt atgttaaaaa gactttggat gagcgttata
     3181 aagatgttaa agacacttta aatacttata agggtgcgat tgaaaccatg gttgcagcac
     3241 tttatgaaga agaaaccata gaaggtgcta aggtaagaga tattatcaaa agttatgaaa
     3301 atgaaaacaa tcttcctacg cgtttgcagg aaataaacga agaacataaa gaagaaagca
     3361 aacaagcaga gtaatgggaa aatatattgc taaagaagga cattggttta tagctatagt
     3421 ttttatctta tttgttattt gttggatatt ttatagcttt tctgtccttc tttttttatt
     3481 tttattggta cttttgttta tttttagaat cccaaatcgt gtaagggtat gcaatgatag
     3541 taaggctata ttatcaccta ttgatggcag gataactaga atagaaaata catttgataa
     3601 atatttaggt gaaagtgttg aaataagcat taaaaatgct ttttatgatg ctggagcttt
     3661 ttacactcct tttaaaatgg atattaatga tattgcgcta aagcatggac tttttttatg
     3721 cagcgaatta aaaagcgcta gaataatgaa tgaaaatgta agtatttttg cttcaagtaa
     3781 cggatctaat gttgttttac ggatatatgc aggctctttt gatagaaaat tgaagcttga
     3841 taatttatct catagcttga cagttggaga taaaatgggt tttttaatta atggaaccat
     3901 aagtatttta ttgccaagag atacacgaat tcatgtagga cttggagacg agttaaaatc
     3961 aggttcttta ttaggctact tagcttaagg ataaaaaatg aacaataata aatcacaatt
     4021 tatttatatt ttacccaatc tttttacagc agcttcagcg tttttgggtg taatttctat
     4081 aatcgcctct atacaaggca attattatat ggctttattc tatattattt tttctttaat
     4141 atgtgatggt cttgatggtc gtgttgcaag gcttacaaag actacttcta aatttggcat
     4201 tgaatttgac tctttggccg atctgatagc ctttggcgcc gcaccggcca tattttttta
     4261 tatggttatt ggctctgaat ttggaagata tggctcttta ataactgctt tttttgttgt
     4321 ttttggagca atacgcctag caagatttaa tgtcactaca ggaacttatg aaccatctgt
     4381 ttttatagga cttcctatac ctactgctgc tgtagtaagt gctatttgga cttatagtta
     4441 ttattattat gattttttaa gagcatatgg aatcattttt ttaatcttgc aagcgatttt
     4501 aggcttgcta atggttagca atatacgcta tccaagtttt aaaaagctag attttaatag
     4561 atcaagtgtt ttaaaggttt tgattatctt aattattgtt ttttcttttt tatatcttta
     4621 tccacttgaa agtttagtaa tcttagcaag tttgtatgtg atttatggga taataagagc
     4681 gatttatacc cttatttttt ctaaatttaa gatgaaagct taagcataga attgagctat
     4741 agcctcacat tctgctttgc taaatccagc ctttattctt gcttcgatat taagtttttt
     4801 acctgctagg gaaaattgat taaacatttt acaaagttct ataaaatcat aattgttttg
     4861 attggaaaat ttccaccagt tatcaccctt gcttacatgt tttatttcat catttaagat
     4921 aatatgcaaa acatctttta aaagactttt tatgggatgg tttgagcttt caagttttgc
     4981 tactacaaaa ggatttgcat caagcccctt ggcttctaac cctcggtgaa ccactcccat
     5041 tcttaaactc aaacaatctt ttgtggcttc aagcgcggct tctaagttat catgaatagc
     5101 aaaatcccca tatttataac ctagctcatc taatgctgca tttaaaagct tgaaatgttt
     5161 gatttcttca tcggcaactt ctagccaatc gatataaaat tgttgaggta gatttttaaa
     5221 acgataactt gcatctaagg ctaaattgat agcactaaat tctatatgcg caatggaatg
     5281 aacaatcttt gctaaagaat gggtagaatt tacaaattta gggcgtctaa tgcgagtagg
     5341 gtgcaataat tttaaagcag ggttaatatt tgtcttaaaa atacttcctt gctcgtgatt
     5401 aaaaatgaat ttttggcttt taaaatcatc ataaaatata gcaaaatttt caaatttgtt
     5461 atcaagattt tgctcataga gtattttttc aagttcatta aaaaattctt tttgcatttt
     5521 aagtctttct aaaatatttt tttgatttta atatataaaa ctaaattttt actataaaaa
     5581 attcaaacta aagctttttt ggaaaataca ttttgataaa aaataaaatt tgctataatt
     5641 cttaagtagt aatttagaac aatttcatca aggataaact atgaaaaaat taaacgaaga
     5701 agaagctagg gttattttaa acaagggcac tgaagctcct tttagtggta aatataataa
     5761 tttttacaaa aaagggatct atctttgcaa gcaatgcggg tctaagcttt atagatctga
     5821 agataaattc aagtcaggtt gtggatggcc aagctttgat gatgaaatca aaggggctat
     5881 taaaagactt cctgataaag atggcattcg cacggaaatt gtatgtgcaa attgcaatgg
     5941 ccatttaggc catgtatttg agggagaggg tttttctgct aaaaatatta gacattgtgt
     6001 taattccatc tctttagaat ttgtaaaagg tgaataataa atgttttcaa atgtaggctc
     6061 tgagctttat ttaatgtttt ttgcgggcat aacattattg gctgtgttaa atccttttgg
     6121 taatttaacg caatttttag ccatgagcga tggcctacct ttagccctta gaaaaaaact
     6181 ttttagaact atactttata cagcattggc tattgtgctt gcttttttat tttcaggacc
     6241 tttgtttatg aattatattt ttagggtttc tttagatgat ttgagagttt ctgggggttt
     6301 ggttttaatt ataatggcta ttaaaaattt attattttca accaagcttg caactcaaag
     6361 ttttgattct tatcaagaag caaatgagaa agaaatttta cgccaaagtt taatacctat
     6421 ggcttttcca atgcttgtag gtcctggaac cttagctagt gtgatagtga tttcagagga
     6481 tggtggattg gatatagctt ttggaggtgt gataatagct tttattttta tgtttgcact
     6541 ttttcatttt gctgctacga ttgaaaaaat tgttggaaag cttattttac atgtcttttc
     6601 gcgtatcgct caggttttta ttgtggcgat ggggtgtaag atgattataa taggtatcaa
     6661 aaatatattt aacatttgat tagacaataa aaagttgata tgaatgcaaa tcacaagcta
     6721 atgataatca aaaattaaaa aataagtata aaaatgaaga gaagttatat ttgattgatt
     6781 aaggtgctaa aatttgtaaa tccactttct tgatcacatt tttcttttaa aatatttaaa
     6841 aatatttttc tttcgatatt tttagctccc ataaattcta aatgtttatt ataaacttga
     6901 caatctatga caaaatcata gggtttaaga agcttgcaaa gtttgattaa agctattttt
     6961 gaagcatttt ttctaaggct taccatactt tctccaaaaa aaaccttacc tataatcagt
     7021 ccataaattc ccccaattaa ttctttatcc tcataaagtt ctaaagtatg aacgtatcct
     7081 tgcttaaaaa gctcatagta attttctata aactcatcat caatccaact ttgaggacgc
     7141 gtgttgcgac acaaatggat aaggcttaaa aaatcataat caagtttaat ttgataaaga
     7201 ttgataaatt ttttcatatt tttttggata tgaatttcgc tgggatttaa tacacatcta
     7261 ggatcagggc accaccaagt aacgggtttg ttggtccatg gaaaaagccc aaaacgatag
     7321 gcttttaaga taaaatcagg ttctagtttt tgacttaaaa aaacgggtgc gtctttgggc
     7381 gcatccataa gtttagaata taagatcgag ctttccattt ttattaagct tgattttagc
     7441 tatcccgcct tttttaagtt ttccaaataa aatttcatca ctgatttttt ctccgatttc
     7501 ttcggaaata atgcgtttta ataatcttac tccaaattct ttattgtagg cttttttcgc
     7561 taagtatagc ttagcttttt catcagcaac taattggata tttttaagat ttttagaaat
     7621 ttcatctaat tctttttgaa tgattttaac aagcacagta tcatctagat cgttaaaatg
     7681 aagaatttta tcaatacgat tgataaattc aggtgcaaaa aaatctttaa tagcacggtt
     7741 gcttttttct tcatttttgc ttaggaatcc aagctcattg ctttctttta gccctaaatt
     7801 tgaagtcatg attataatag tatttttaaa gtcagcttta aggccactat tgtctgtaag
     7861 ctctgcatta tcaaagattt gcaagaaagt attgcttaaa tcaggatgag ctttttctat
     7921 ctcatcaaag aggataagac tgaaaggatt ttttcgaacc gcattgctta aaagtcctcc
     7981 atcttcatat cccacatatc ctgcaggaga acctatgagt ttgcttatgc tatgtttttc
     8041 tgcatattcg ctcatatcaa aacgctctaa atttaaacct aaaaattctg ctaaaacttt
     8101 gcaaagttca gtttttccaa ctccgctaga tcctgtaaat aaaaatactc ctcgtggggt
     8161 atttaaattt ttaaatcctg caaaactttg ttttagggtc gcaacaagct tgtcaatcac
     8221 ttcatcttga ccaaatattt ttgcctttaa attaagactt agattcatca aggctttatt
     8281 ttgatcaaat tcaaacattt tatgatgatg agtcattttg gctaaaactt gttctaaatc
     8341 tttaatatcg gcattttttt tagtttttgc cttaagaaca taagaagctc caagctcatc
     8401 gataagatct atagcactat caggaaggta tttatcgctg aaaaatttct tgccccaaac
     8461 aacagcttgc tgaaggactt catcactaat tttaatctta tgaaaatcct catatttgct
     8521 ttttaagcct tgtaaaattt gaaaagcttc ttcttggctt ggttcatcta cattgatttt
     8581 agcaaaacgg cgacttaagg ctttgttttt atcaaaagta tttttatatt ccataaaagt
     8641 ggttgcacct atacatttta aagtaccatt gcttaaggct ggcttgagta gattagaaaa
     8701 atctgtatgt gattctccag ttgctccagc tccaactatg gtgtgaattt catctataaa
     8761 taagatagca ttaggaagtt tttgaagtcc ttctaaaact tctttgattc gtttttcaaa
     8821 atcgccacga tatttagtcc ctgaaagcaa tcctgctata tctaggctaa aaattttagc
     8881 attttgcaaa ttttttggaa cttttttttc agcaatggcc aatgcaagtc cttcaactat
     8941 cgcagttttt ccaactccag cttctccgat taaaatagga ttgtttttct tgcgtcttga
     9001 taggatttgt ataatgcgct caagctcgaa ttttcttcct attaaagggt ctattttacc
     9061 tttttgcgcc aaaagcgtta agtcgcttgc ataagaattt aaattttcta tttcgctatt
     9121 ttgtttaaaa tcttgaattt tttctaaatt cataccatgt ttttgtaaaa gaaagctcga
     9181 atatgttcta tcatcttgga tgagtttttc taaaaaatca atgattttta tttcattttt
     9241 atgattaaga atttcatcta aaactataga attaacaggt tcgatttctt gatccaaact
     9301 ttggtttttt tctgctatat aatttttaag ttcactttct aaaagttcaa attcggcatc
     9361 tgcgagttct tcaaatattg atttaaaatc tgaacttagt tttaatatag caaaaagcac
     9421 atgctcacaa gttgtaaatt catgacgatt gatagtgctt aaatgtttag cattatcaag
     9481 gtatttttgt aaattttctt gatatttcat tcttcttcca ctctagtttg taaaggaaaa
     9541 tttgccaatt tagcagcatc agaaactttt ttttgctttg aaagtgcaat ttcttgagtg
     9601 taaattccac aaattccact gccattaaga tgaacctcta acataatttt attagctgtt
     9661 tcaaaatcat ggtagaaaat attgattaaa acttcaataa caaagtccat cgtggttaca
     9721 tcatcgttta ataatataac cttaaacatt ttaggctctt taagcttact tttttctaat
     9781 acttttaact ttggcattat ttttctttat aaattttatc taaatcatct tgtataaaat
     9841 ctgttggaat tttacctaaa taaaaatttg ttgaagtgtt actatcccaa taattgctaa
     9901 gattttgata aattccattt ttcattacta ctttaaaagg caattgctcc atgctttgat
     9961 aatctatatc ttttaaaatt tgagcaataa tacgatcatt ttgcgaatca ttacttaaga
    10021 aataataagc tccataatca tcagcaaatt ttttaaccgt ttcatcactt acatcttcaa
    10081 aatgtgttag ccccatgata ataaatttat ttgagttatt tttccaaagt ttgctaagct
    10141 ctaaagcttc ttctttgcaa ggagcgcaaa aagttccaaa aaaatcaatc atcaacactt
    10201 tatcttcctc gccttcaaca atgaagcctt tatcggttcg aattaaggtt ttagctcctc
    10261 catttacgct atttaataca atcttatcgc ctttgctgta ttcttcaaac ataaaatcat
    10321 tttgtatgtc ttcttggtgc gagcaagcgc ttataaaaaa acctataatg ataaaaaatg
    10381 acaatatcgt tttctttttc atactagtcc tttatttgta atttttcata gcagatcttg
    10441 cttccatatc tgcttgtttt ttctttaaac tttcgcgttt atcgtgcaga ttttttcctt
    10501 tggctaaggc tagcgtggct ttaactttgt ttttatggtt aaaatagagt tctaagacta
    10561 ccaaggtgta tccctcaata ctaactttgc ctaaaagctt atctatttgt ttgcggtgca
    10621 ttaaaagttt tctagcagct ctttcttcat gtttataata agaatgcgta gtgctaaggt
    10681 gcgatatatg agcatttagc aaaaataatt cacccttaat aatacgcaca aaagagtctt
    10741 ttaaatttgc ccttccagcg cgtaaagcca cgacttcact accctttaaa accactcctg
    10801 attcaaagcg ttctataatg ctataatcaa ataaggcttt tttatttcta gcaatgactt
    10861 tcattgatgt accttaaaaa cactacttcc gcttccactt aggaaaaaac cttgttctaa
    10921 aaaaagaaac attttaggat ataaagttac acaaggagta aataaatcat taagctgggt
    10981 atttttaaaa gtttctaaaa gttctttcgt gtttaaatct ttgtaaattt tagcttcaag
    11041 aatgtttttt tcaaaatcaa tttccccttt atcaaattca tcataaactt ttttagtttg
    11101 acaagatact tcaggaaaaa cccattctag gctcggtata gtatcattaa attcttctat
    11161 gatttcacca catccgctta cattagcact ttcaaaacca ctcaagaaaa aagcaatatc
    11221 gctgcctagt tgagtgctta attctataag tttttgagtg cttaatttta agtttagttc
    11281 ttcattaatt agcattaaaa aacttgcgca atcactacta cctcccccaa gtcctgcaca
    11341 tgtggggata tttttgatta attttaagct tttggtttta aaaaattctt ctaatttatt
    11401 ttgatagcca ttttgacaaa gtaaatgata agcttttgtg atgatattat cctcgcaatt
    11461 aaaattgcta atgatttcaa aacctttagg agaattagag cttttttcaa cgatatgaat
    11521 ttcatcaaaa aggtttttta aaagtataaa gcgagattct aaaagatgat atcgtctttt
    11581 atcaaatccg acaagtttta aaaaaatatt tgctttagca tatgctttca tgggatcaat
    11641 tttttgctta aatcatctaa tttaacatcg ttttttacca cagaatgtaa attctcatct
    11701 ttgatttgag taaggagttc ttttcttaaa atcattagag attttggagc atcgatgcct
    11761 attttggcat atccttttcc agtttgaacg attttgattt caattccttc accaataaca
    11821 atactttcat tttcttttcg cgataatatt aacatttttc aaccttatt
//
LOCUS       DBBXOW010000058        11866 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.059, whole genome shotgun sequence.
ACCESSION   DBBXOW010000058 DBBXOW010000000
VERSION     DBBXOW010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11866
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.059"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(56..988)
                     /locus_tag="ACJE1S_001448"
     CDS             complement(56..988)
                     /locus_tag="ACJE1S_001448"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HGG0806987.1"
                     /translation="MKKILITLLSTFVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAIIAVLSAFALHYMVIGPKQFSHDGKKIYAFSLFERIFHF
                     IAAISWVILVPTGFVMMFGATFGGGVFVRVCKNLHAFATILFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRLSAIIHNFLGIICAVFFGIHIYMAVFAIKGSIHSMVSGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            complement(985..1626)
                     /gene="fdh3B"
                     /locus_tag="ACJE1S_001449"
     CDS             complement(985..1626)
                     /gene="fdh3B"
                     /locus_tag="ACJE1S_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase FDH3 subunit beta"
                     /protein_id="HGG0806988.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCSVACDEAHELPINIR
                     RRRVITLNEGVQGKEVSTSISCMHCDDAPCAIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPESTNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHSRLQSRGYGIANPSQSIEWKIAYIGKERL"
     gene            complement(1630..4434)
                     /locus_tag="ACJE1S_001450"
     CDS             complement(1630..4434)
                     /locus_tag="ACJE1S_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(3892..3894),aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HGG0806989.1"
                     /translation="MSSMNETIKLNRRSFLKMAALSSLASPLLARSETLREANADELK
                     EAYEGSQKIKSVCTACSVGCGIIAEVQNGVWLRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANP
                     AVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIF
                     DEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLIQITHEVAKNKPTTL
                     IWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENL
                     PGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDK
                     VDNAGTSLKALVVMGNGITSTAQQAKVKEGLEALELLVLADPFVNEAGIIAERKDGIY
                     LLPAATQFETSGSVTATNRSGQWRFKIIDPLYESKEDQEILFELAKKLGFYEDFTKTL
                     RDENGKIVWPENATREIASAVRSIGLNGWSPERLKKHTLNWDKFDEVTLEGKDELAGE
                     YYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGENLLAKNAPINSPID
                     TGYPQITKDNIEKVLGITLSAQEKEKMGAIWSYDDSNIIATKCIEKGIVPYGNAKARA
                     VVWTFKDQIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQKAKDYSKEFPL
                     NLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELASEQKIKAGDMIWVHSPEGT
                     KIHVRVKLNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYD
                     IMCQIPETKGGLCRISKDGV"
     gene            complement(4434..4625)
                     /locus_tag="ACJE1S_001451"
     CDS             complement(4434..4625)
                     /locus_tag="ACJE1S_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HGG0806990.1"
                     /translation="MKNRREFLKKSAIALGTASLLGGASVAFGQDEERKDLVRGKSKK
                     KEVLYQRSANWEKYYMRAE"
     gene            complement(4600..5301)
                     /locus_tag="ACJE1S_001452"
     CDS             complement(4600..5301)
                     /locus_tag="ACJE1S_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0061077 - chaperone-mediated protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HGG0806991.1"
                     /translation="MDLEKLRLARSLYYQCLGELFVFSFSENRLCNLKAYLEAMQEGL
                     FDESLRTSFEILLRNLQDAQDLQAFYKEYDELFLALKNTIPMTFSYIEEGFENSKALL
                     NVRQILAKSTIRRNEKIFKEAEDSVGFCFVLMSEFLKNKEDELAKALFEKVINQSIDE
                     FLMLIFSNSKAKLYKEIANIAAQFIEFERYCFELEKPTIKPSKKVQNDLSRSEFLRRE
                     ANKQRRSREKSQGIS"
     gene            complement(5633..6781)
                     /gene="nspC"
                     /locus_tag="ACJE1S_001453"
     CDS             complement(5633..6781)
                     /gene="nspC"
                     /locus_tag="ACJE1S_001453"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0045312 - nor-spermidine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HGG0806992.1"
                     /translation="MFCEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKVVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEMSEIAHLSHHIVF
                     NSLYQFDKFKSLCANNSLGLRCNLEFSFAPKELYNPCGKYSRLGILSKDLENFDLSGV
                     EGLHFHALCEESADALEAVLKVFEEKFGKWIKQMKWVNFGGGHHITKQGYDIRKIITL
                     CKNFSDKYGVQVYLEPGEAVGWQSGVLVASVVDIVENEKRIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDFKENEFAYLLTGNTCLAGDVMGEYAFKEELKRGDRV
                     VFLDQIHYSIVKNTTFNGIRLPNLMLLNSKNELEMVREFSYKDYALRN"
     gene            6905..8446
                     /gene="cueO"
                     /locus_tag="ACJE1S_001454"
     CDS             6905..8446
                     /gene="cueO"
                     /locus_tag="ACJE1S_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HGG0806993.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTMHWHGIPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            8448..8669
                     /locus_tag="ACJE1S_001455"
     CDS             8448..8669
                     /locus_tag="ACJE1S_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HGG0806994.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAI
                     SLNDEIVFDENTSLKDGDKIALLPPVCGG"
     gene            8670..9116
                     /locus_tag="ACJE1S_001456"
     CDS             8670..9116
                     /locus_tag="ACJE1S_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HGG0806995.1"
                     /translation="MSEFVLTNNALDIPQIYAKWYEFAKDKNCGALLTFCGIVREEEG
                     IEALSFDIYEPLLKKWFDEWQKRVKEEGVILLFAHSIGDVKTHESSYLAGVLSKQRKL
                     GLKLINEFVEDFKASAPIWKYDVINKQRIYAKERSSKLCGAGLLKS"
     gene            9161..10351
                     /locus_tag="ACJE1S_001457"
     CDS             9161..10351
                     /locus_tag="ACJE1S_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HGG0806996.1"
                     /translation="MLMSYEESLKILHSHIKPFARVEKIALTECLGRILAQDIKASKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPEFKVENNTCVKTFTGSLMSEGSD
                     TLVPVENVRVEKDTLFIEKKVSKGFAVREIGENYKKDEILLKKGTKLSYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECGILENESLVDI
                     IFMP"
     gene            complement(10368..10790)
                     /locus_tag="ACJE1S_001458"
     CDS             complement(10368..10790)
                     /locus_tag="ACJE1S_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory regulator AgrC"
                     /protein_id="HGG0806997.1"
                     /translation="MFIYFLIWQVLFVLGWNLRFILKLIMGEDVFIENFILDKIISVA
                     YIIIAFFFFKTLVQATKEKLFYLVFAFFVCGEIVSKLFFAFIRLLDSIRLQEMIVEII
                     FYAEIIFYICIPFTPAYFISFLIVWLSLKGQKEVKKAI"
     gene            complement(10850..11287)
                     /locus_tag="ACJE1S_001459"
     CDS             complement(10850..11287)
                     /locus_tag="ACJE1S_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806998.1"
                     /translation="MALIFPFLKAFYYEIARVTKQKYFIYAFNTYYLGLLTLIIGIGL
                     VFLLASLVFWILAWVEFKEFDKQEISNKEKFTIPTQKVIFDFDLKWIKITMVLSLVLF
                     FVFIGLKFTQIITFQSIRREFFDFETYGRLIHNLFLFDMFYFI"
     gene            complement(11344..11646)
                     /locus_tag="ACJE1S_001460"
     CDS             complement(11344..11646)
                     /locus_tag="ACJE1S_001460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0806999.1"
                     /translation="MQNLHEILLQKKIKEIRFKAIASIVCGFLGIIPYLGFLFALASW
                     ILFFILLYDLKIYGGAKNLFKNLFIAAGIGFFGILISTSSLFVILEPRTQLQPDLF"
BASE COUNT         4190 a         2159 c         1701 g         3816 t
ORIGIN      
        1 taaaaatttg tgaaaatctc ctaaaaaatt ttaagaggtt ttcacagggt aaaatttaaa
       61 tttttacatt aggatcataa gaaaagctag gttcaatttg ttttttattg cttagttctt
      121 tataccaata gctatgcaag atataaacct cttcttcttc tttatatcca cttaccatag
      181 aatgaatact tcctttaata gcaaataccg ccatataaat gtgaattcca aagaatactg
      241 cacaaataat tcccaagaaa ttgtgaataa tagctgaaag tcttaaaagc tcaatttgtg
      301 ttaaaccaaa aagaccttga atggcagtag aattaaaatc aaggaaatac ataaagccgc
      361 ctgtaataat catcaaaaat ccaccaaata cggcaatata ataccaagat ttttgcccaa
      421 aattaaattt acccgcagga acagggcgtt ttaccttgct tagataacca cccactatca
      481 tcatccatct gatatcataa ctagcaggaa gcattctttt tatccaccat aaaaacatag
      541 gaatgataga aatgataaat aaaatcgttg caaaagcatg taagtttttg catactctta
      601 caaatacgcc gcctccaaaa gttgcaccaa acatcatcac aaaacccgta ggtaccaaaa
      661 tcacccacga aatagccgcg ataaaatgaa aaattctttc aaataaagaa aaggcataaa
      721 ttttctttcc atcatgagaa aattgttttg gacctatcac catataatgc aaagcaaaag
      781 ctgaaagaac tgcaatgatt gcaatcaaag ctatagtagc tatatactca ccttgcaaag
      841 ttgtccaaag cttaccaaaa gtatcataat ttggaatatt tgtaatacga tgaaaatccc
      901 aaatttgtgt atcttgtccc attcgttcac tgccataggc aaacaaactt acaaaagtgc
      961 ttaaaagtgt tatcaatatt tttttcataa gcgttccttt cctatgtaag caattttcca
     1021 ttctatactt tgcgaaggat tagcaattcc ataaccccta ctttgcaatc tgctatgata
     1081 aatttcttct atcttagagc tttcacctac taaaagtgct ttggttgagc acatagctgc
     1141 acatacaggt acttttcctt cagcgatacg attttgtcca taaagctctc tttctttttc
     1201 cgaatttgta ctttcaggtc cacctgcaca catcgtacat ttatccataa tgcctttgtt
     1261 accaaatacg ctatcttttg gaaattgtgg agcgccaaaa ggacaagcgt aaagacaata
     1321 accacaacct atacaaattt ctttatcgtg taaaacaata ccatctgcac ggatataaaa
     1381 acaatccaca gggcaaacta tagcacaagg tgcatcatca caatgcatac aagaaatcga
     1441 agtagaaact tcttttcctt gcactccttc attaagggtg atgacacgac gacgacggat
     1501 attaatagga agttcatgcg cttcatcaca agctaccgaa catccattac aatcaataca
     1561 acgctcatta tcacaaaaga atttcaagcg ttctttttct aaatttgcaa aatttacctt
     1621 actcatcttt tacaccccat cttttgagat acggcataag ccgcccttgg tttcaggaat
     1681 ttgacacata atgtcataac cataatttgt aaccgtattt gcactttctc cacttgcata
     1741 aggtttagtt cctttaggga aattgtgcgt taaatctaca ccttgcataa ctcctgtaaa
     1801 atggaaaggt aagaaaatca tatcttttgc tacacctgga ttgagtttta ctctcacatg
     1861 aattttagtt ccttctggag aatgcaccca aatcatatcc cctgctttaa tcttttgctc
     1921 gcttgcaagt tcaggattta tctcacaaaa catctcaggc gttaaacgag taagatacat
     1981 cgaggcccta ttttccatac ctgcaccatt taaattcaca agtcttgctg tgactaggtt
     2041 gagtgggaat tcttttgaat aatccttagc cttttgcaca gaaacaaatt ttgtatccac
     2101 acgataaagc gctttttgat cctcaaaact aggatatttt tgcaccaaat catttcttgg
     2161 agaatgaagc ggctcgcggt gaagtggaat ttgatcttta aatgtccaaa ccacagccct
     2221 agctttagca tttccataag gcactatacc tttttctata catttagtcg ctatgatatt
     2281 actatcatca taagaccaaa ttgcacccat tttttctttt tcttgggcac ttaaagtaat
     2341 acctaaaact ttttctatat tatctttagt aatttgtgga tagcctgtat ctataggtga
     2401 atttatcgga gcatttttag ccaataaatt ttcaccctca tactcaagtc cgaaattatt
     2461 tctaaatccc ataccacctt ttgctacttc gatatcggta ttataaagca caggagatcc
     2521 tggatgttta tcactccaac aaggccaagg aagtccgtag tattcacccg ctaattcgtc
     2581 tttgccttct aaagtcacct catcaaattt atcccaattt aaagtatgtt ttttaagtct
     2641 ttcagggctc caaccattaa gtcctatact tctaactgca cttgcaattt ctctagtagc
     2701 attttcaggc caaacaatct tgccattttc atcgcgtaag gttttagtaa agtcttcata
     2761 aaaacctaat tttttggcaa gctcaaataa aatttcttga tcttctttgc tttcataaag
     2821 tggatctatg atcttaaatc tccattgtcc gctacgattt gtagctgtta cgcttccact
     2881 tgtttcaaac tgcgttgcag caggtaaaag ataaattcca tcttttcttt ctgcaataat
     2941 tcctgcttca ttgacaaaag gatcagctaa aaccaaaagt tctaaagctt ccaaaccttc
     3001 tttaacttta gcttgctgtg cagtcgaagt gataccattt cccattacca ccaaagcttt
     3061 caaagacgtt cctgcattat ccactttatc atttccatct ttgccattta aggctgcagc
     3121 ccaccatcta gcaagtgaaa gtccagtttt atgcatccaa tctttgctta caaaatttcc
     3181 taaaagccac tcataatcca cgccccaaat tttggcatag tatctccaag tcgcttcatt
     3241 taaaggataa tagcctggta aattttcact caaacacgcc atatctgaag caccttgcac
     3301 attatcgtgt ccgcgtaaaa tatttacccc gccgccgaat ttacctatat ttcctaaaac
     3361 catttgtact ataggtgcta aacgcgtatt tgaagttcct acggtgtgct gtgttaagcc
     3421 catagcccaa atcaatgtag ttggtttatt tttagctact tcatgagtga tttgaatgag
     3481 gagttcttta gaaattcctg ttacattttc tacttcttca gcagtccatt ttgcagcttc
     3541 ttcacgaatt ttatcgatac caaaaactct ttcatcaagg tattttgtat cttctaaacc
     3601 ttcatcaaaa atgattttta acattccata catgaaagca atatcagtac ctggacgaat
     3661 tcttgcataa atatctgctt ttgctgcact ctttgtaaat ctaggatcta caacgataag
     3721 cttagcacct ttttcttttg cttttaagaa gtgtctaaaa cctacagggt gatttactgc
     3781 tggatttgct ccaataataa taatacattt acttctttga atatctccaa gatggtttgt
     3841 catagcgcca taaccaaatg tattcgccac accggcgact gttgcgctgt gtcaaattct
     3901 agcttgatga tctacattat tggttccaaa aaatgctgcg aattttctta tataataagc
     3961 ttgttcattg tttagttttg cagaacctaa aaacataacg ctttctggat tttctttacg
     4021 ataagctgct aatttttctc cgatttcact taaagcttgt tcataagaaa tgcgtttcca
     4081 ttctccattt tcttttttca tagggtattt taaacgcaca tgagaacgca ccatatcgat
     4141 catatcagag cccttacagc aatggcctcc cgagctaaca gggtgatctt gtgcgatttc
     4201 ttggcgcaac cacactccgt tttgaacttc tgcaataatt ccgcagccta cagaacatgc
     4261 ggtacataca ctcttaatct tttgacttcc ttcataagct tcttttaatt catccgcatt
     4321 tgcttctctt aaagtttcgc ttctagctag caacggactt gccaaacttg aaagcgcggc
     4381 cattttaaga aaagaacggc gattaagctt gatagtttca ttcatacttg acattattca
     4441 gccctcatat aatatttttc ccaattagca cttctttgat aaagcacttc cttctttttg
     4501 cttttgcctc taacaagatc ctttctttct tcatcttgcc caaaagctac acttgcaccg
     4561 cctaaaagac ttgcagtacc caaagcaata gcagattttt taagaaattc cctgcgattt
     4621 ttcacgagat ctcctttgtt tatttgcttc tcttcttaaa aattcagaac gagataaatc
     4681 attttgaact ttcttagaag gttttatagt aggtttttca agttcaaaac aatatctttc
     4741 aaattctata aactgcgcag caatatttgc tatttcttta taaagcttcg cttttgaatt
     4801 tgaaaaaata agcattaaaa attcatcaat gctttgattg atgacttttt caaacaatgc
     4861 cttagcaagt tcatcttcct tattttttag aaattcactc attaaaacaa aacaaaatcc
     4921 tacactatct tcagcttctt taaaaatttt ttcattgcgg cggattgtgc ttttagctaa
     4981 aatctgcctt acattaagta atgcttttga attttcaaag ccttcttcta tgtaagaaaa
     5041 agtcatagga atagtgtttt taagtgctaa aaaaagctca tcgtattctt tataaaatgc
     5101 ttgaagatct tgtgcatctt gtaaattacg aagtaaaatt tcaaagcttg ttcttaaact
     5161 ttcatcaaat aaaccctctt gcatagcttc taaataagct tttaagttac acaatctatt
     5221 ttcagaaaat gaaaaaacga aaagttctcc taagcactga taataaagac ttctagctaa
     5281 tcttagtttt tctaaatcca tttttaactc attcaaattt ttgaagattt gccgttaaat
     5341 aatttgcaaa ataatattat gcaaattaca cctaattttc cttcttaatc cttatttttg
     5401 actgatttat cttaatatga tttgttttaa aataaactga aattttctta aaaatctgcc
     5461 taatctgaaa aaatagaatt tagctttaaa agcctataaa atagtatttt aatgaggttt
     5521 tttaaaaaaa gttgcataaa atatttaaac ctaaaaaaca aaactttcat tttgtcattt
     5581 aaaaaatatt ttatgctaaa aagaaataat aaaattattc ttccaaaaaa ttttaatttc
     5641 ttagagcgta atccttgtaa gaaaattctc ttaccatttc aagctcattt ttggaattta
     5701 aaagcattaa atttggaagt cttatgccat taaaagttgt atttttcact atagaataat
     5761 gaatttgatc taaaaatacc accctatctc cgcgttttaa ttcttcttta aaagcgtact
     5821 ctcccatcac atctccagct aaacaagtat ttcctgtgag taaataggca aattcatttt
     5881 ctttgaaatc cgaaattttt tcattttctc ttgttgctaa aattctagca tttaaaacct
     5941 cgctcgtata aggcatgatg atggtatcag gcatatgagc ttcacttgaa gtgtctaaaa
     6001 tagcaattct tttctcattt tcaactatat ccactacact tgctaccaaa accccacttt
     6061 gccaacccac agcttctcct ggctcaagat aaacttgcac gccatattta tcactaaaat
     6121 tcttacaaag agtgatgatt tttcggatat catagccctg ttttgtgata tgatgacctc
     6181 cgccaaaatt gacccatttc atctgtttga tccatttgcc aaatttctct tcaaaaacct
     6241 ttaaaacagc ttctaaagca tctgcactct cttcacaaag tgcatgaaaa tgaagtcctt
     6301 ctactccgct taaatcaaaa ttttctaaat ccttgctcaa aatccctagt ctagagtatt
     6361 tcccgcaagg attataaagc tctttaggag caaaagaaaa ttctaaattg caacgaagtc
     6421 ctaaggagtt attagcacac aaggatttaa atttatcaaa ttgatacaaa gaattaaaaa
     6481 caatatgatg agacaaatgg gcaatctcac tcatttcgtc ttctttaaag gcaggcgaat
     6541 aagtatgaat ttctttatcc atatattctt tagcaaattt tgcttcccaa agcccgctac
     6601 aagtacagcc tttaagatac tcacctacaa ccttcatcgc tcctgaaaaa gcaaaacctt
     6661 ttagagctaa aagcactttg gcaccactct tttcgccaac actcgctaaa agctcacaat
     6721 tttttcttaa cttatcttct tctaaaatat aagctggagt ttgaattttt tcacaaaaca
     6781 ttatttttcc ttgattaaat tgctaaaatc ataacaaaat taaaccaaat tttcaaaata
     6841 aatatttact aaaactaaaa aaataatgac tataatacaa aaaatcaagt aaaaggaaaa
     6901 actaatgaat agaagaaatt ttttaaaatt taatgcactt actctagcaa gtatgggtgt
     6961 agcctatgca aatcctatgc acgatatgca ctccatgcat aaaaatcatt ctataaatca
     7021 tgacttagat acttctttta taaactttgc tccaaaaaat ttaaaacttt tagatccaaa
     7081 acaattcccc caaggagaaa ttttaaaagc cttgccttta ctcaaaaatg aaagtaaaga
     7141 aaaaaatatt tttcgtgcta ccctagaaat caaagaaaat catatagagc ttatcaaagg
     7201 taaaaaaacc ttattttata cttacaatgg cctcgtgcct gctccaaaaa tagaagtttt
     7261 tgaaggagat aaacttgaaa ttttagtcaa aaacaaactc aaggaagcta caactatgca
     7321 ttggcatggc attcctgtgc cacctgatca agatggaagc ccacatgatc ctatcttagc
     7381 aggagaagaa agaatatatc gttttgaaat tcctcaagat agcgcaggaa cttactggta
     7441 tcatccacac cctcattata ccacttctaa acaagttttt atgggtttag caggggcttt
     7501 tgtgatcaaa gcaaaaaaag atgctttaag tcatttaaaa gaaaaagatt tgatgattag
     7561 cgatttgcgt cttgatgaaa acgctcaaat tccaaacaac aacctaaatg attggctaaa
     7621 tggtagagaa ggagaatttg tactcattaa tggacaattt aaacctaaaa tcaaactcgc
     7681 cacaaacgaa cgcatacgca tttataatgc tactgcggca agatatttaa atttacgcat
     7741 acaaggagct aagtttatac ttgttggtac tgatggtgga cttatagaaa aagctattta
     7801 taaagaagaa cttttcttaa gtcctgcttc tcgcgtagaa gttttaatcg acgctccaaa
     7861 agatgggaat tttaagctag aaagtgctta ttatgatagg gataaaatga tggtaaaaga
     7921 agaacctaat accctatttc tagccaatat taacctaaaa aaagaaaatg tagaacttcc
     7981 aaaaaattta aaaattttca aaccttcaga agaacctaag gaatttaaag aaataatcat
     8041 gagtgaagat catatgcaaa tgcatggtat gatgggaaaa agtgaaagcg aattaaaaat
     8101 cgctcttgcg tctatgtttt taatcaatgg caaaagctat gatttaaaac gcattgattt
     8161 aagctccaaa cttggagtag ttgaagactg gatagtgata aataaatctc acatggatca
     8221 tcctttccat atacatggca cgcaatttga actcatctca tcaaaactca atggcaaagt
     8281 tcaaaaagcc gaatttagag ccttaagaga tactataaat gtgcgtccta atgaagaatt
     8341 aagacttaga atgaaacaag attttaaagg acttagaatg tatcattgcc atattttaga
     8401 acatgaagat ttaggaatga tgggaaattt agaagtaaag gaataaaatg gtaaaagtgg
     8461 aatttttagg ccccataaat aaagaaaatt tagagcttga ggtaaaaaat ttaaaagaat
     8521 taaaagaaat tttgcaaaaa gatgagagtt taaaagaatg gctagaactt tgtgccatat
     8581 ctttaaacga tgaaatcgta tttgatgaaa atactagctt aaaagatggt gataaaatcg
     8641 cacttttgcc accagtttgt gggggttaaa tgagtgaatt tgtattgaca aataatgcct
     8701 tggatattcc gcaaatttat gcaaaatggt atgaatttgc taaggataaa aattgtggtg
     8761 ctttgctgac tttttgtggt atagtgcgcg aagaagaagg cattgaagca cttagctttg
     8821 atatttatga gccgctttta aaaaaatggt ttgatgaatg gcaaaaaaga gttaaagaag
     8881 aaggtgtgat cttgcttttt gcacattcaa tcggagatgt aaaaacacat gaaagctctt
     8941 atttagcagg agttttaagc aaacaaagaa aattggggct aaaactcatc aatgaatttg
     9001 tagaagattt taaagcaagc gcgcccattt ggaaatatga tgtgataaac aagcaaagaa
     9061 tttacgctaa agaaagatca agcaaacttt gtggagcggg tcttttaaaa tcatagttta
     9121 atcttttaaa aaatcaatct tgataaatta aggaattaaa atgctaatgt cttatgaaga
     9181 aagtctaaaa attttacatt ctcatatcaa accttttgca agggttgaaa aaatagctct
     9241 taccgagtgt ttggggcgaa ttttagctca agatataaaa gcgagtaaaa atcagcctga
     9301 atttccaacc tcggctatgg atggttatgc gatcaaattt gaagatcaag acaagccttt
     9361 aaaaatttta ggcctcacac ctgcgggcac tatgcctgaa tttaaagtag aaaacaatac
     9421 ttgtgtcaaa acctttacag gatcacttat gagcgaagga agtgatactt tagtgcctgt
     9481 tgaaaatgtt cgtgtggaaa aagatacact ttttatagaa aaaaaggttt ctaaaggctt
     9541 tgcagttaga gaaatcggag aaaattataa aaaagatgaa attttactta aaaaaggcac
     9601 gaagctaagc tatagcgaaa tagctctttt ggctgaactt ggattttttc acattagtgt
     9661 gtttataaag cctattgtag gggttttaag tagtggaagt gagatcaaag atctaggaga
     9721 agccttagaa aatcccgctc aaatccgctc ttcaaatcat atcgccatag ctaatttagc
     9781 taaaaattta aattgcgata caagggtttt tcctctttta aaagatgatg aaaaagctac
     9841 tttttctaca cttgaaagtg ctttgcaaag ttgtgatatt ttgattacaa cgggcggggt
     9901 ttctatggga gattttgact ttttaaaaaa agccgtcaaa gaatacgaaa tcatcatcga
     9961 taaagccgac ataaaaccag gcagacatat caaaatagcc aaggctaatg aaaaattcat
    10021 catcgcctta ccaggttttc cttactcggc tatggtaatg tttaatcttt acgcaagaga
    10081 gattttaaac tcttggttac ttcagcctaa agactatatt tgcaaagcct ttttacaagg
    10141 aagctacaag aaaaaaacac cttatttgga atttgtcgct tgtaatgtgg aatttaaaaa
    10201 tggacgcatt ttagctaatc ttgaaggtaa aaaagaaggc tctagtgcga ttataaacaa
    10261 tcttaacaat aaagccgctc ttatggtggt gccaaaagaa tgtggaattt tagaaaatga
    10321 aagcttagtg gatattatct ttatgccttg aaatttgtca aaaaggttta aatcgccttt
    10381 ttgacttctt tttgcccttt taaactaagc caaacaatta aaaatgaaat gaaataagca
    10441 ggcgtaaatg gaatacagat ataaaatatt atctccgcat aaaatattat ctccactatc
    10501 atttcttgta atcttatact atctaatagc cgaataaaag caaaaaataa cttacttaca
    10561 atttcaccac aaacaaaaaa tgcgaaaaca agatagaaaa gtttttcttt tgtagcttga
    10621 actaaagttt taaagaagaa aaaggcgatg ataatatagg ctacacttat aattttatcc
    10681 aaaataaaat tttcaataaa aacatcttca cccattatta attttaaaat aaagcgtaaa
    10741 ttccatccaa gaacaaacaa aacctgccat ataagaaaat aaataaacat tttataggtt
    10801 tttagctttt tacaaaataa aaatacactt aataaagcta aaaatgttgc tatataaaat
    10861 aaaacatatc gaataaaaaa agattgtgta ttaacctacc ataggtctca aaatcaaaaa
    10921 attctctccg tatggattga aatgtaatta tttgagtaaa ttttaaacca ataaaaacaa
    10981 aaaacaaaac caaagacaaa accattgtaa ttttaatcca ttttaaatca aaatcgaaaa
    11041 taactttttg tgttgggatt gtaaattttt ctttatttga aatttcttgc ttatcaaatt
    11101 ctttaaattc aacccacgct aaaatccaaa aaaccaaact tgctagcaaa aacaccaaac
    11161 ctataccgat aatcaaagta agaagcccta aataataggt attaaaagca taaatgaaat
    11221 acttttgctt tgttactcta gcaatttcat agtaaaaagc tttcaaaaaa ggaaaaatca
    11281 aagccaaagt tgggatatat aatattaaaa aaaacagtaa tggctaaaaa ggtattatct
    11341 ccatcaaaat aaatccggct gtaactgagt acgaggttct aaaatcacaa ataaagaact
    11401 tgtgctaata agaataccaa aaaatccaat ccctgcagca ataaagagat ttttaaataa
    11461 atttttagca ccgccataga tttttaaatc ataaagcaag ataaaaaaca aaatccaact
    11521 cgcaagagca aataaaaatc caagataagg aatgatacct aaaaatccac aaacaatact
    11581 tgctatagct ttaaagcgaa tttcttttat ctttttttga agtaaaattt catgtaaatt
    11641 ttgcattgaa attccttaaa aattaaaaag gatattttac tgaattttgt ataaaataca
    11701 atcattatat ataaaatatt ttcaacttaa gctattttga gattatttta atcataacaa
    11761 aatctcttac ggtcttcaca ctgatgctct tataaaatct tatatatcaa acttatcaag
    11821 atgccttttg aaaatattta taatgaaaat atgaaaaata acttta
//
LOCUS       DBBXOW010000059        11177 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.060, whole genome shotgun sequence.
ACCESSION   DBBXOW010000059 DBBXOW010000000
VERSION     DBBXOW010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11177
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.060"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(92..1915)
                     /locus_tag="ACJE1S_001461"
     CDS             complement(92..1915)
                     /locus_tag="ACJE1S_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /protein_id="HGG0807000.1"
                     /translation="MSILEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIY
                     DKTHNVFMYENLEEEINFFYQSILEKTHRYPFICIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALSTIDLSEELCSGKIYLVDIEEERVDIQLLILFDMKDMFEYLSLYEMFV
                     NNVYYKKFYEDVWHKADELCEKNIKVVIRNLNSSLCIGFECYSHLLQNIPSMLESIPF
                     QRILNERKNKFENAIVVSAGPSLAKQLSLLKAYQDKAVIFCADGALSMLEKEGIVPDY
                     VTNLDFTDLAMKFFQNKENKTSLNVLSCATHLSLVHFLDNKSVVLRDDPLYQRFNLND
                     FGYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFDEEGNSHSKGFDFGEKFSGEENI
                     DKLKVPAYAGKGEVLTHTTWNDYRIKLEYLFACNDQKAKFYNATEGGARINFTEELSF
                     KECCEKLLTKEKPKFELPKSLTKNRSDKLLVKFKEKIQKDQENAKRFLDDALALKQIL
                     ENILSKDFILPLEFLEKVYQNIENFNHSLDEDEFIQDGILKAVMYERGLKISLVYKKN
                     IVDNASFITAYIKAYHEWLLYFMEKLEQKINIIINFPKELP"
     gene            complement(1926..3176)
                     /locus_tag="ACJE1S_001462"
     CDS             complement(1926..3176)
                     /locus_tag="ACJE1S_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0807001.1"
                     /translation="MIVSKTYEIDSCDDVELDIKRESKLEFKLWYDDEKEIKALVFII
                     PGLGGDVDENYREHLAEFVAGEFNVAVVSVNYHCIGNRPQTGSSFFMDDIDKLILKTS
                     CEALNIQVNLDKLNSLEELSSTLKEVDHILEEQKNQKLINPNFKLSIHLSLQPTKNEY
                     QNFGVMQAQDLLNAALYLKAHAPFDTMGGGMPVIMIGSSHGGYLAHLAAKFAPWLING
                     VIDNSSYAKFLWRLIGFGKEIDFTKYYCFGTGIFFKHIHIYCSDKTFWTSNSSSNNFF
                     SIPRRMIRYILELNHIENQANYPKPYYVSYHSFYDKEIAPPDEKLELYKYLKQFDFDA
                     ELHMIKNPDQIDGKFIKSLDHGMGMSIKTLISKELPCMLEKVLSESDSKKEWKNKSIS
                     YPCDGLVYRFSEKNNKINLDITKT"
     gene            complement(3176..3691)
                     /locus_tag="ACJE1S_001463"
     CDS             complement(3176..3691)
                     /locus_tag="ACJE1S_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HGG0807002.1"
                     /translation="MKRAFTILELVFVIVILGILAAIALPKFSSSRDEAEVSKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSNFNGIKEVNFRVGDEKECLKLVF
                     INKADFVLMGISSNEASKNAIINIANNPKQEFQNLDFTSNSKNKACVALSKNENFKNL
                     ASKTYLLIGGM"
     gene            complement(3695..4702)
                     /gene="tsaD"
                     /locus_tag="ACJE1S_001464"
     CDS             complement(3695..4702)
                     /gene="tsaD"
                     /locus_tag="ACJE1S_001464"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HGG0807003.1"
                     /translation="MKNLILAIESSCDDSSIAVIDKDTLECKFHKKISQEMEHNVYGG
                     VVPELAARLHSEALPKILEQCKGYFDKLCAIAVTNEPGLSVSLLSGISMAKTLALSLN
                     LPLMAINHLKGHIYSLFLEEPICLDMGILLVSGGHTKVLYLKEDGKIEILARTNDDSF
                     GESFDKVAKMMNLGYPGGVLIENLAQKAKSKNIHFNIPLKHSKELAYSFSGLKNAVRL
                     EILKHENLDEDIKAEIAYGFENAACEHIMDKLEKIFNLYKFKTFGVVGGASANLNLRS
                     RLQNLCEKYQSKLKLAPLKYCSDNALMIARAGVDTYKRKEFVELEEEILSPKNKNFLR
                     M"
     gene            complement(4699..6093)
                     /locus_tag="ACJE1S_001465"
     CDS             complement(4699..6093)
                     /locus_tag="ACJE1S_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M99 family carboxypeptidase catalytic
                     domain-containing protein"
                     /protein_id="HGG0807004.1"
                     /translation="MKFFISIIFFISGLFALDLEFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGKNGDLNRKFASISPKDPD
                     YQTVKRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTNEINASK
                     YPDLESIATQTVNSVNASLVDPKHAYHLKNTKTQELGDAEMLKALTYFVISNRKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFTRTFELTPQGVDKAINQELEVKLFDDK
                     ILLSLKNPRQVINYVPFPVNKELNYNTSNELTAVIAENNSFYIQYGNRFQTRLYPEYL
                     EFSNPFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESNILV
                     SKKNMQKPYSLDMAGKIYRVEFYELRGANLQQFLENSVESKLIKNAKMLDLATLRTAR
                     AKDKFIGSILVEFE"
     gene            complement(6090..7166)
                     /gene="dxr"
                     /locus_tag="ACJE1S_001466"
     CDS             complement(6090..7166)
                     /gene="dxr"
                     /locus_tag="ACJE1S_001466"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HGG0807005.1"
                     /translation="MIVFGSTGSIGLNALKLATLKNIKISALACGENISLLNEQIEQF
                     KPQFVAIKNSKDKHLVKHDKVFVGQEGLEEILSLCEDDLLLNAIVGFAGLKSTLKAKE
                     LGKKIALANKESLVVAGKFLKGAKFLPVDSEHSALKFLLEGKKDIAKLYVTASGGAFY
                     KHKIKDLSHVSVKDALKHPNWNMGSKITIDSATMANKLFEIIEAYHLYNFKNIDALIE
                     PKSLVHAMCEFKNGASTAYFSRADMKLSISEAIFSKHDSKILEPVDFVKLSGLKFYKI
                     STKKYPIFKLKDELLNNPDLGVIINAANEIGVQNFLDHKIQFLDIAHVVFKALDHFGV
                     PKISSIDEVFEYDYKTREYLRGMK"
     gene            complement(7163..7888)
                     /locus_tag="ACJE1S_001467"
     CDS             complement(7163..7888)
                     /locus_tag="ACJE1S_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HGG0807006.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPVLALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLVCASILGTLIGIFVYSFWLSLLCSFFVAFFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGILDRIDAVIIATFVMVALL"
     gene            complement(7897..8235)
                     /locus_tag="ACJE1S_001468"
     CDS             complement(7897..8235)
                     /locus_tag="ACJE1S_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807007.1"
                     /translation="MPVSPIGNMNFVNQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKVEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            complement(8237..9544)
                     /locus_tag="ACJE1S_001469"
     CDS             complement(8237..9544)
                     /locus_tag="ACJE1S_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HGG0807008.1"
                     /translation="MKYTELMQLQKFFSQFKKIDFIKRVNDNILELSFNRERFIFDLT
                     RGMSAIYTAKLMSKNHNAPFDFMLKKYFNNAFIKEVKLLQDNRILCFSVKVDKAYKSY
                     ESKIYFEFTGKNTNVIITDEKDLIIEALRHIDKSYRVVKPNVVLEALKPYKMDEKFEE
                     IKNFKDYFTQKFEILHANKIKQIQTLKLAQIDKKIENLKELYLALDKEEVLLDQALNL
                     RKQADILFANLSILKEYEREFELDDFEGKKVKFKLDLSPKESANLFYKNAKKLEQKAR
                     NLNLQRENLKEKLDFAYGLKEMLSKAKNEFELEILLPKKSTKKNQENKQDNGIANFYF
                     NEFKICVGKNEKGNENLLKSAKKDDLWLHVRDIPSSHVLIISNKQKISEEVIEFSARL
                     CVNFSGLKKGSYWVDYTLKNFVKVQQKAFVKYTNFKSINITKD"
     gene            9607..10182
                     /locus_tag="ACJE1S_001470"
     CDS             9607..10182
                     /locus_tag="ACJE1S_001470"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HGG0807009.1"
                     /translation="MKLENLNCVILCGGKSSRMGEDKSKLIFKNQTLTQFQVEKFSKI
                     FKNVYVSAKEDKFGAKFKLIKDCPEFEIYSPMLALYSILSNFKDEFVFILSVDSPNLS
                     DKELLKFLPSLKQDYQIIIAKTPSHKHPLCGFYHSSVAHFCKKLLEKNEQKIALLFSK
                     AKTHFVDFEDESPFLNLNFYQEYEQFKSEYE"
     gene            10179..11174
                     /locus_tag="ACJE1S_001471"
     CDS             10179..11174
                     /locus_tag="ACJE1S_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002829487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HGG0807010.1"
                     /translation="MKKILFLIFFYSLVFCDDFEQALEFEKKGQYEKAMQIYKKLALQ
                     NSPKQDLKENNASLLSSIKHETQNTQKTPSTKEDFSRIALANYLGENSSFNPLGISSY
                     KMNYFLPFAYSFGSLGGENRKTEMKFQLSIKKRLFEDLLGLGEKYYVGYTQTSWWQNY
                     KHSSPFRETNYQPEFFVDIPLHFEDYKFLNNLRVGILHESNGKGDKNLESRSWNRIYA
                     SSVFLYQRFLFVPRIWYRIPENSEDDDNPEITHYMGNFDINIGSLGNDYFINLMLRNN
                     LDFHDNKGAVQVDIGYDIFDNGIYWYLQYFNGYGESLIDYNKRLQRLSTGFLISY"
BASE COUNT         3753 a         1922 c         1458 g         4044 t
ORIGIN      
        1 caagttttat tttgtatgaa atttaaaagt ttatttccta agggttcatt taccccactt
       61 aataaagctt gtatgttttt ttctagcaaa ttcatggaag ttccttagga aaatttataa
      121 taatatttat tttttgttct aacttttcca taaaataaag caaccattca tggtaagctt
      181 taatataagc tgtgatgaaa ctagcattat ctacaatatt ttttttataa actaaactta
      241 tcttaagtcc tcgctcatac atcactgctt ttaaaatacc atcctgtata aactcatctt
      301 catctaaaga gtgattaaaa ttttctatgt tttgatatac tttttctaaa aattccaaag
      361 gcaagataaa atctttactg agtatatttt ctaaaatttg ttttaaagct aaagcatcgt
      421 ctaaaaatct tttagcattt tcttgatctt tttgtatttt ttctttgaat ttaactagga
      481 gtttatcact tctattttta gttaaacttt ttggaagttc aaatttgggt ttttcttttg
      541 taaggagttt ttcacaacat tctttaaaag aaagttcttc agtgaaatta atccttgctc
      601 caccttcagt agcattgtaa aatttagcct tttgatcatt gcaagcaaaa agatattcaa
      661 gttttatacg ataatcattc caagttgtat gggttaaaac ttcaccttta cctgcatagg
      721 cagggacttt aagtttatct atattttctt caccactaaa tttctctcca aaatcaaaac
      781 cttttgagtg tgaatttcct tcttcatcaa aggctaaatc ttgtcctatc atgatgatat
      841 ttttaaatcc taaagctaaa gctaaagtat aagaaaaatg acttacatga gtacccgtat
      901 ctatataacc aaagtcatta agattgaagc gttgatataa agggtcatct cttaaaacta
      961 cacttttatt atctaaaaaa tgaaccaagc taagatgagt agcacatgaa agcacattta
     1021 aagaagtttt attttcttta ttttgaaaaa atttcattgc tagatcagta aaatctaaat
     1081 tcgtaacata atcaggcact ataccttctt tttcaagcat actcaaagcc ccatccgcgc
     1141 aaaatatcac tgctttatct tgataagctt taagtaaaga aagttgcttg gctaaactag
     1201 gtcctgcaga aactactata gcattttcga atttgttttt tctttcattt aagattcttt
     1261 gaaaaggaat gctttcaagc atagaaggga tgttttgtaa aagatgagaa taacactcaa
     1321 aaccgataca taaactggaa tttaaatttc ttatcacaac tttaatattt ttctcgcaaa
     1381 gctcatctgc tttatgccag acatcctcat aaaacttttt ataataaaca ttatttacaa
     1441 acatttcata caaacttaag tactcaaaca tatctttcat atcaaaaagt ataagcagtt
     1501 gaatatctac tctttcttct tcgatatcca caagataaat ttttccacta caaagctctt
     1561 cactcaaatc tatcgtgctt aaagctagga taaaaagttc tatttcactt tcaaatacaa
     1621 aaagatgttt atagtgttta gctaaatttt taatcagtaa agcattgcct ataccataaa
     1681 tacatataaa aggatatcta tgagtttttt ctaaaatact ttgataaaaa aaatttattt
     1741 cttcttctaa gttttcatac ataaaaacat tatgagtttt atcatagata tttaaatttt
     1801 catctatatt aaaacgagaa caagttttat tttgtatgaa atttaaaagt ttatttccta
     1861 agggttcatt taccccactt aataaagctt gtatgttttt ttctagtatg ctcatgcgga
     1921 tttccttaag tctttgtgat atctaaattg attttattgt ttttttcact aaaacgatac
     1981 accaaaccat cacaagggta gcttatgctt ttgtttttcc attctttttt agaatcagat
     2041 tcagataaaa ctttttcaag catacaagga agttctttgg aaatcaaagt ttttatagac
     2101 atccccatac catgatctaa acttttgata aatttaccat caatttgatc tggatttttt
     2161 atcatatgaa gctcggcatc aaaatcaaat tgttttaaat atttataaag ttctaatttc
     2221 tcatcaggtg gagctatttc cttatcataa aaagaatggt agcttacata ataaggtttt
     2281 ggataatttg cttgattttc tatatgattt agctctaata tatatcttat cattctcctt
     2341 ggtatggaaa aaaagttatt tgagctcgaa ttgctcgtcc aaaaagtttt atctgaacaa
     2401 taaatatgga tatgtttaaa aaagataccc gttccaaaac aatagtattt tgtaaaatca
     2461 atttccttgc caaaacctat aagacgccaa agaaacttag cataactaga attatctatc
     2521 actccattta taagccaagg tgcaaattta gctgctaaat gagccaaata tcctccatga
     2581 gaactaccta tcatgataac gggcataccc ccccccatag tatcaaaagg tgcatgagcc
     2641 ttaagataaa gagctgcatt taacaaatct tgcgcctgca ttactccaaa attttgatat
     2701 tcgttttttg ttggttgcaa acttagatga atgcttaatt taaaatttgg attaattaat
     2761 ttttggtttt tttgttcttc taagatgtga tcaacttctt tgagtgttga gcttaattct
     2821 tctaaagaat ttaacttatc taaattaact tgtatattta aagcttcaca acttgttttt
     2881 aaaataagtt tgtctatatc atccataaaa aagcttgatc cagtttgcgg gcgattacct
     2941 atacaatgat aattcacact tactacagcc acattaaatt cgcctgctac aaattcagct
     3001 aagtgttcac ggtaattttc atccacatct ccaccaagcc cagggatgat aaacactaaa
     3061 gcttttattt ctttttcatc atcataccaa agcttaaatt caagctttga ttctcttttt
     3121 atatcaagtt ctacatcatc acaagagtca atctcataag ttttactcac tatcattaca
     3181 ttccccctat taaaagataa gttttactgg ctaaattttt aaaattctca tttttactta
     3241 gtgccacgca agctttattt tttgaattgc ttgtaaaatc taagttttga aattcttgtt
     3301 tggggttatt ggctatattg attatggcat ttttgcttgc ttcattacta gaaattccca
     3361 tcagtacaaa atcagcttta tttataaaaa caagttttaa gcattctttc tcatcgccta
     3421 cgcgaaaatt tacttctttt ataccgttaa aattactaag atcaacattt tcaaccccgc
     3481 ttacattact catcgttttt atagagctta aatgatcatt ttttaaagta taaatgctta
     3541 tatcattgat taaagtttta agattgttta aggatttact cacttcagct tcatctctac
     3601 tagaactgaa ttttggcaaa gcaatcgctg ctaaaattcc taaaatcacg ataacaaaaa
     3661 caagttctaa tatagtaaaa gctcttttca ctttttacat ccttaaaaaa tttttatttt
     3721 ttgggcttaa gatctcctct tcaagctcca caaattcttt tcttttataa gtatcaaccc
     3781 cagctcttgc tatcatcaaa gcattatcag agcagtattt taaaggggct agttttaatt
     3841 tactttgata tttttcacat aaattttgca aacgagaacg caaatttaaa ttcgcacttg
     3901 ctcctcccac aacaccaaag gttttaaatt tataaagatt aaaaatcttt tctaatttat
     3961 ccatgatatg ctcacatgct gcattttcaa atccataagc aatttctgct tttatatctt
     4021 catctaaatt ttcatgcttt aaaatttcta aacgcaccgc atttttaagc cctgaaaaac
     4081 tataagcaag ctctttagag tgttttaaag ggatgttaaa atggatattt tttgatttag
     4141 ctttttgggc taaattttct ataagcactc caccaggata gcccaaattc atcatcttag
     4201 ctaccttatc aaagctttcg ccaaagctat catcattggt ccttgctaaa atttctattt
     4261 ttccatcttc cttaagataa agaaccttag tatgcccacc acttacgagc aaaattccca
     4321 tatcaaggca aataggctcc tctaaaaaaa gactataaat atgaccttta agatgattga
     4381 tagccattaa gggcaaattt aggctaagtg ctaaagtctt tgccatgctt atgccactaa
     4441 gcaaagaaac actaagtcca ggttcatttg tcacagctat ggcacataac ttatcaaaat
     4501 accccttgca ttgctcaagt atctttggca aagcctcgct atgaagtctt gctgcaagct
     4561 caggtaccac tccgccataa acattgtgct ccatttcttg agagattttt ttatgaaatt
     4621 tacactctaa agtatcttta tcaatcactg ctatagagct atcatcacaa gaactttcta
     4681 tagctaaaat aagatttttc attcaaattc cactaaaata gaaccgataa atttatcttt
     4741 agctcttgca gttcttagcg tagcaagatc aagcatttta gcatttttga taagcttgct
     4801 ttcgacacta ttttctaaga attgctgcaa attagcccct cttaactcat aaaattctac
     4861 gcgataaatt tttcctgcca tatctaaaga ataaggcttt tgcatatttt ttttagaaac
     4921 taaaatattg ctttcatcct tgctatgatc aaaacctatg atatttacgc gcacattagc
     4981 tatctttgga ataagaaaat tctcttttac ttttaccttg gttccaaaag gaactgtggt
     5041 ttcattgcca tcaacttgaa aagttacttc attaaaaggg ttgctaaatt caagatattc
     5101 aggatagagc cttgtttgaa atcggttgcc gtattggata taaaaagaat tattttcagc
     5161 tatgaccgcg gtaagttcat tgctggtatt ataatttaac tccttattaa caggaaaagg
     5221 cacataattg ataacttgtc ttggattttt taaagaaagt aaaattttat catcaaaaag
     5281 cttgacttcg agctcttgat tgatggcttt atcaacacct tgtggggtaa gttcaaaagt
     5341 tctagtaaat tcaattcctg ctgttttgag atagttttca atagccaaaa gatgataata
     5401 agcccttaaa tttacaggca aatttttact cgcctcgttg gcaaaagcgg ctttgcgatt
     5461 ggatataaca aaatatgtta aagcttttag catttcagca tcaccaagct cttgagtttt
     5521 agtattttta agatgataag catgttttgg atcaaccaag gaagcattga cactatttac
     5581 agtttgagtg gctatgcttt caagatcagg atatttacta gcattgattt catttgtatc
     5641 aatcacactt gaatttcccc aacgcttagg attttgcata gcatctatat aagtaggttt
     5701 gtaaaaaccc caaccatcgt gaagattgat caccatgcta acttcaggaa gtaaaataag
     5761 ctctttaatg cgtttaactg tttgataatc aggatctttt ggacttatgc ttgcaaattt
     5821 acggtttaaa tctccatttt tcccgcgtga gcgtttaata atgctatcaa aagctaaatt
     5881 aggagcaact atgattttac ccttagtgat attataatca ctcaaaagta agcttgccgc
     5941 atgaaatcca ccaggctcat cgccttgaat tcctccaaaa atcaaaaccg tattgttatc
     6001 atctaagctt tttccattct ctcccacgct aaattctaaa tctagagcaa aaagtccgct
     6061 tataaaaaaa ataatcgata taaaaaattt catttcattc cccttaaata ctctcttgtt
     6121 ttataatcat actcaaaaac ctcatcaata cttgaaattt taggcacacc aaaatgatcc
     6181 aatgctttaa aaacaacatg agcgatatct aaaaattgta ttttatgatc taaaaaattt
     6241 tgcactccaa tttcgttagc agcattgata atcacgccta aatcaggatt gtttaaaagc
     6301 tcgtctttga gtttaaaaat aggatatttt ttcgtgctga ttttataaaa ttttaaacca
     6361 gaaagtttaa caaaatcaac cggctctaaa attttactat catgcttaga aaaaatagcc
     6421 tctgatatag atagtttcat atcagccctt gaaaaatacg ccgtacttgc accattttta
     6481 aactcacaca tggcatggac taaagatttt ggttcgatga gagcatcgat atttttaaaa
     6541 ttatacaaat gataagcttc gatgatttca aaaagtttat ttgccattgt tgcactatct
     6601 atcgtgatct ttgaacccat attccaattt ggatgcttta gagcatcttt gacactcaca
     6661 tgacttaaat ctttaatttt gtgtttataa aaagctccgc cacttgcggt aacataaagc
     6721 tttgctatgt cttttttacc ctcaagtaaa aatttcaaag ccgaatgctc gctatctacg
     6781 ggtaaaaatt tcgcaccttt tagaaatttt ccagcaacga ccaagctttc tttgtttgcc
     6841 aaggcgattt ttttgccaag ttcctttgct tttaaagtgc tttttaatcc tgcaaaaccc
     6901 acaatggcat tgagcaacaa atcatcttca cacaagctta aaatttcttc taaaccctct
     6961 tgtcctacaa aaactttatc gtgttttact aaatgcttat ctttagagtt tttaatcgct
     7021 acaaattggg gtttaaattg ttctatttgc tcatttaaaa gacttatatt ttccccgcaa
     7081 gcaagagcag aaatcttgat attttttaaa gtggcaagtt ttagggcatt aagccctata
     7141 cttcctgtac ttccaaaaac tatcataaaa gagcaaccat cacaaaagta gcgataatca
     7201 ccgcatcaat tctatctaaa attccaccat gccctggtat aagatctcca ctatccttta
     7261 cacccgcttc tcttttaaaa taactctcaa gcaaatcacc aatgactgca aaaaatgcta
     7321 caaaaaatga gcaaagcaaa gaaagccaaa aactataaac aaaaattcct atcaaagtgc
     7381 ccaaaatact cgcacaaaca agaccaccta tcacaccttc tagggttttg ttaggacttg
     7441 ttggagaaaa aggagtttta cccataagtt ttccgataaa atacgcccca ctatcacaag
     7501 ctgcaacgat aatgataagc caaaaaagtg caaacatacc ctgatctaaa tacacctgcc
     7561 aaagcgctaa tacaggcaaa ctaggataaa tataaataag agctggtttt aaggaagcct
     7621 ttttataaac caaatatcca acgactaata acaaagctaa aatcccaaaa agcaaagctt
     7681 tatgcgataa acttcccaaa ataaaagcta tagccaaagg gataatagag atattttcta
     7741 aagcaaaaag tttttttgct tcactaaaag atagatacaa taaaaccgca aaaacgataa
     7801 aattgataaa aaattgatca atcaacgcga taataataat agcccctatc atcacaagag
     7861 ctgaaataat tctagttgta ttaaacatat ttttccttat atactaatat ctaagcgatg
     7921 aatgctttgt gcgtctttaa aatttggatc tttagactca tcttcttcat ttttctcatc
     7981 atcgctggtt ttagcttctt gattgtgttt tttctttttt tcttcttgtt cgactttttc
     8041 tttgatctct tctttgattt catgagtctc attgactttc tcaagcttgt ttaaagtttt
     8101 ttctttttca ttaaattcag ccatatttag cgtagctgca aaaccttctt ttgcaagctc
     8161 attgcttgct tgtgtagctg gataagccat attctgatta acaaaattca tatttcctat
     8221 tgggctaact ggcattttaa tcctttgtga tattaatact tttaaaattt gtatatttta
     8281 caaacgcctt ttgctgaacc ttaacaaaat tctttaaagt ataatcgacc caatatgaac
     8341 ctttctttaa tcctgaaaaa ttcacgcaaa gccttgcgct aaattctatc acttcttcgc
     8401 tgattttttg cttgtttgaa ataattaaaa catgagaact tggaatatct cttacatgca
     8461 gccacaaatc atcttttttt gcgctcttta gcaaattttc attgcctttt tcatttttgc
     8521 ctacgcaaat tttaaactca ttaaaataaa aattagctat gccattatct tgcttgtttt
     8581 cttgattttt cttggtgctt tttttaggca ataaaatttc aagctcaaat tcatttttag
     8641 ccttgcttag catttctttt aagccataag caaagtctaa tttttctttt aaattttctc
     8701 tttgtaaatt taaatttcta gctttttgtt ctaatttttt agcattttta taaaataaat
     8761 tagcgctttc ttttggactt aaatcgagtt taaattttac tttttttcct tcaaaatcat
     8821 caagttcaaa ttctctttcg tattctttta aaatgcttaa attagcaaat aaaatatccg
     8881 cttgctttct taaatttaaa gcttgatcta ataaaacttc ttctttgtct aaagcaagat
     8941 aaagctcttt taaattttct atttttttat cgatttgagc gagtttgagt gtttgaattt
     9001 gcttgatttt atttgcatgt aaaatttcaa atttttgagt aaaataatct ttaaaatttt
     9061 ttatttcttc aaatttttca tccattttat aaggctttaa agcctctaaa acaacattag
     9121 gcttaacaac gcggtaactt ttatcaatat gccttaaagc ctctataatc aaatcttttt
     9181 catctgtaat aattacattg gtatttttac ctgtaaattc aaaataaatc ttgctttcat
     9241 agctcttata agctttatct accttaacac taaaacacaa aatgcgatta tcttgaagca
     9301 atttcacctc tttgataaaa gcattattaa agtatttttt tagcataaaa tcaaaaggag
     9361 cgttatggtt tttactcatt aattttgcag tataaatagc actcattcca cgagttaaat
     9421 caaaaataaa tctttctcta ttaaagctta gctctaaaat attatcatta acacgcttga
     9481 taaaatcgat ttttttaaac tgggaaaaaa atttttgtaa ttgcataagt tctgtgtatt
     9541 tcataaaaga gattataaga tatttttgat gaatttatga tagaattgaa ataaaaaagg
     9601 aaatttttga aacttgaaaa tttaaattgc gtgattttat gcggtggtaa atcaagtcgt
     9661 atgggagagg ataaaagcaa attgattttt aaaaatcaaa ccttaaccca atttcaagta
     9721 gaaaaatttt caaaaatatt taaaaatgtt tatgtgagtg ctaaagagga caaatttgga
     9781 gcaaaattta aactcataaa agattgccct gaatttgaga tttattcccc catgcttgca
     9841 ctttattcta tactttcaaa ttttaaagat gaatttgttt ttattttaag cgtggatagt
     9901 cctaatctaa gtgataaaga acttttaaag ttcttgcctt ctttaaagca agactatcaa
     9961 atcatcattg ccaaaactcc ttcacataaa catcctttat gcggatttta tcacagctct
    10021 gtagctcact tttgtaaaaa attgctagaa aaaaatgaac aaaaaatcgc tttattattt
    10081 tctaaagcaa agacccactt tgtagatttt gaggatgaaa gtcctttttt aaatcttaat
    10141 ttttatcaag aatatgagca atttaaaagc gagtacgagt gaaaaaaatt ctttttttga
    10201 tattttttta tagtttggta ttttgcgatg attttgaaca agctttagaa tttgagaaaa
    10261 aaggacaata tgaaaaagct atgcaaattt ataaaaaact agccttgcaa aattctccta
    10321 aacaagattt aaaagaaaat aatgcttctt tactttcaag cataaagcac gaaacacaaa
    10381 atacccaaaa aacacctagc acaaaagagg atttttcgcg cattgctttg gcaaattatt
    10441 taggagaaaa ttcaagtttt aatccccttg gaatcagctc atataagatg aattatttcc
    10501 taccttttgc ttatagtttt ggctcattag gcggggaaaa tagaaaaact gaaatgaaat
    10561 ttcaactcag tattaaaaaa agattatttg aagatttgtt aggattaggt gaaaaatatt
    10621 atgtaggcta cactcaaaca tcttggtggc aaaactataa acattcctca ccctttagag
    10681 aaacaaatta tcaacctgaa ttttttgtag atattccttt gcattttgaa gattataaat
    10741 ttcttaataa tctaagagta ggaattttgc atgaaagcaa tggcaaagga gataagaatt
    10801 tagaatcacg ctcttggaat agaatttatg cttcaagcgt gtttttatat cagcgttttt
    10861 tatttgttcc tagaatttgg tatagaattc ctgaaaacag cgaagatgat gataatcctg
    10921 aaatcacaca ttatatggga aattttgata tcaatatagg gtctttagga aatgattatt
    10981 ttataaatct catgctaaga aataatcttg attttcatga caataaaggc gctgtgcaag
    11041 tggatatagg atatgatatt tttgataatg gaatttattg gtatttacaa tatttcaatg
    11101 gctacggaga aagccttata gattacaaca aacgcttaca aagactttct acgggatttt
    11161 tgatttcata ttaaatt
//
LOCUS       DBBXOW010000060        11095 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.061, whole genome shotgun sequence.
ACCESSION   DBBXOW010000060 DBBXOW010000000
VERSION     DBBXOW010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11095
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.061"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            119..3169
                     /locus_tag="ACJE1S_001472"
     CDS             119..3169
                     /locus_tag="ACJE1S_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HGG0807011.1"
                     /translation="MNITNLLNIKHFLNTSSYFTNHLSKSLRVVVNISVITSLVLAQS
                     LTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTNGK
                     NYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAI
                     NTFSVDDSFSPVFNANKGDVVNMGTIKANEIVLVGNKVENIKGTLQADKVDIKGDKVY
                     LEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYL
                     YIGSQSASNEEMINSWKGFAKLVNEGIFGELKFKDVYLGKDIDFAGASTINPVGFGNG
                     FVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGG
                     LAGHIENGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGG
                     FVGYTTGNTTFDGISLKDIRFIKSGAFTGGFAGMTQGNVIFENIVLNDLEEISGSHAG
                     GFAGWINDGTFNNIILNNIEKISVSATHKYIFTGGFTGYAGAGTYKNIILNNIGEISA
                     NGTASLDEKSIYAGGFVGNIENGSNIANSNIYFYGLLNSSSNKNYITHNENILNLSNT
                     TDFQTFINQSKIAGLEYLTNTSTSNSHLHMINGGKIGNEKSKITFDKDNFTYNTPKIS
                     EVDPDGSGSSSSPTAPNEGELSSITLEQSDFEDEILKTIIDEILNEDYVLNIDSIDFN
                     KFNEGDVAILLYLLKNTSDKKLKESLKQSLEFYTEFNKGGLKTEFEKWYGSDESTYKT
                     SMGKYNYIIESLANLKEYVNTTLKPELESIKNNLNRLEFLKAEIKRLERVYQKAMQND
                     LFPYDQLEVVYKNTQEKIDAYYAEAQGLLDILKNKNKPFLDDLITKEYSFEDKYTDIQ
                     GTFAIAGSSIDANAIENLADKPILSLPENENSGDSQTTNNTDSTDIVNTFSKQVKLTS
                     TESILILPAEETQSHIKEDERERGRVCITSDNAKTNNPCIAITF"
     gene            3257..4951
                     /locus_tag="ACJE1S_001473"
     CDS             3257..4951
                     /locus_tag="ACJE1S_001473"
                     /inference="COORDINATES: protein motif:HMM:NF038205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807012.1"
                     /translation="MQVKFFLKNRIFLSFASVALIFNSVSYAASQAISIGDKRFQTPR
                     HSFSNEEVWDFDDKTFKQINGTNYYGVFKQGLVSDIILEVFNPKQSLQGAKLEILTLN
                     HSSEEILEVQSMHAANPMDKNLHPIKILPFLVTGSSLKGDSINNKLLIKEAELSSAVF
                     LEPSNIKTKNPPKKEEKDKINYVISGGLAREGNAKNNTLELLDGSYINMGVENIYNLK
                     LNGAPYAVGGLAIFGDAIGNSLLAQKGSKVDIHTASFYRDMVGEFILDERITHLVGGL
                     AYNGKVEKNKLNLNGVEFNIHAPSGLYSSFAPVHIAGAFVDGNGKKAYDATKNTLVID
                     NFLLNLRADGKTPIFYNAIFLANFFGGKTNKEDANANSIVLKDVPALKRISKKVKVQG
                     IYDFFSGYTLDGEANFNTLDIELKSPLQVSNSYLRHSGFGFYGAFVSKGASNNTIKIR
                     NNLTVINGTQNPSDRINIITGRTLAGEANFNVIDFKDSQASLPLFIYATTQENFEGSI
                     HYPEYAKHNKISLNNVFGRKDIRSGVEAMNVENNQVFYHNVEAQASGEGVNRESSV"
     gene            5009..5566
                     /locus_tag="ACJE1S_001474"
     CDS             5009..5566
                     /locus_tag="ACJE1S_001474"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807013.1"
                     /translation="MLNIYGIREVEESKNNQVIFNNVGFNTDRISEGSELILIGGVGK
                     RVHHNLLSIQDLEIGAYDKEKDFIYIAASAIPDANSNLALSYGNTLYIGGDVSIHERS
                     LLNVLSGSVIRIPNYTNNKADDITLPAPSLAQLTKDNYLILEQALRARVVNNFEHYSL
                     IYHSNNQDKPFIESLETPINLSEES"
     gene            5669..5839
                     /locus_tag="ACJE1S_001475"
     CDS             5669..5839
                     /locus_tag="ACJE1S_001475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807014.1"
                     /translation="MNKSQLNQLLGRISKNPKTLNYKKIPQLQQENLRVVPLTLSLDN
                     KGKVIYGEIQSD"
     gene            5884..6216
                     /locus_tag="ACJE1S_001476"
     CDS             5884..6216
                     /locus_tag="ACJE1S_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG0807015.1"
                     /translation="MKKILVGLKLCVGVCIANDILIKKGENLYKKCIACHGVNGDKIA
                     PGSKGNIKIGGLNKAYLIKQLQGYAVGKADNGGAKVIMYANMKNWKFTTSDIEAVSAY
                     IAQLPKAK"
     gene            6239..7780
                     /locus_tag="ACJE1S_001477"
     CDS             6239..7780
                     /locus_tag="ACJE1S_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HGG0807016.1"
                     /translation="MEKPFLKSIILASCLLTRALSQQNKENAEALEQMIEISHYKNVP
                     QNENIQNTLKSKQSPLDIKMDKQDSLQEDTKKVLDKEGLVAPSSEEFRFKYKFFVDTK
                     EDGKTLTLEDLGINEVWLRESIIALKRSDLNVETLQEIVNIVSYYFQYHGYPSATAYI
                     PQQEITDSIQINIMLGKLGEYQVKNYSKHLKESAISSKLKESLQGKILRTKALEDAIY
                     KINEMSGIKASGSLVAGSEYETTDVIITIEDSKKANAILFFDNYGSKGSGVYRAGVSG
                     ALNNLLGYGDSLNYFAQLSDEMQKSYGFTYNFFLGNLKVSPRVNKSNYELGEEYESLG
                     AYGSSLDLGVDLSYPLFINTTNSLYLTGGYVYRKLEDIYGSFGIDFNKESNAFYLGTE
                     GTIGLIPNNILSYNTQLTYGDIKPKSVFLENSPVMGEFWKFNAASNNAYYFNNKISHI
                     LNISYQKTIGDYQLDSSETATLGGAYGVRAYPNGFGEADSMILTTIGLRFNIFNPNFY
                     ITPFL"
     gene            7827..8003
                     /locus_tag="ACJE1S_001478"
     CDS             7827..8003
                     /locus_tag="ACJE1S_001478"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807017.1"
                     /translation="MAGREGKNDIFVDAVGLELLYIKPNGFYIKLDLAKAAYKYEADG
                     KRRDRLYTSMGFYF"
     gene            complement(8196..8435)
                     /locus_tag="ACJE1S_001479"
                     /pseudo
     CDS             complement(8196..8435)
                     /locus_tag="ACJE1S_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
     gene            complement(8449..9048)
                     /locus_tag="ACJE1S_001480"
     CDS             complement(8449..9048)
                     /locus_tag="ACJE1S_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HGG0807018.1"
                     /translation="MLPKWDSSFSVHNAKIDDQHKKLFELAAKVEIVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIAYPAFEEHKKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIIAKKWLLEHILYEDMKVEKWRSSSLATDEGKDVSFKAADDSDDDKPQFYLYKCN
                     CPGKVHDVPYGIHQKIELQGHKFTCKICKQAITFFQKHS"
     gene            9183..9848
                     /locus_tag="ACJE1S_001481"
     CDS             9183..9848
                     /locus_tag="ACJE1S_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HGG0807019.1"
                     /translation="MAARILLLEDDLSLSEIIEEFLIDEGYEVYLCTNAKEALELAYE
                     KHFDLWILDVKVPLGDGFSLLKELRACGKQTPAIFMTSLNTTEDLKEGYNAGCDDYIR
                     KPFELAELSIRIQVLLKRAFSHKNEDYEDLGNGFKFSFTSQILYHFDKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWEYDEEPSELSLRAYIKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            9841..11046
                     /locus_tag="ACJE1S_001482"
     CDS             9841..11046
                     /locus_tag="ACJE1S_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HGG0807020.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLAIFFTLWYQKLYEELVVVKGTSL
                     RENHRNIIINILNSRFVPMNESASNIAQSTGLKFAIFDKKQAIFDNLDFDFRKAKVEL
                     KGRGIYDGKVFFLDRMNTDNYFLKHTNEDNANTESRLKILIQGEDVKKDLIWIRIKVF
                     SFAIMAFCILGLIAYILVKIALKPLEDKIITLNRFIKDSTHELNTPLSVILMSIEQLE
                     NQKLEHNTKFTRIKLAAKSLSQVYSDLVFYNFPNTLELNKQELDLKALIEERLEYFKI
                     FFEQKKISLKLNLHQASIFASKNQISKLIDNLLSNAIKYNKKGGEISIELKTGFLSIA
                     DTGCGISKSNLKHIFDRYARFNTDQGGFGIGLSLVKKICDDNDIKIICESVENQGSVF
                     ELSWSAKKI"
BASE COUNT         4023 a         1484 c         1955 g         3633 t
ORIGIN      
        1 catctcattt ttattttttt taataaaaca ataagtataa tccgaaccat aaaaaagaag
       61 gggaatataa tgttaaaaag tcctgatcgt atattgtgta ttaaaaaaaa agggggggat
      121 gaacataact aatcttttaa acataaaaca ttttttaaat acttcatcat actttactaa
      181 tcatcttagc aaatctttaa gagttgttgt aaatatttct gtaattacaa gtttggtttt
      241 agctcaaagc ttaacagcat caaatttacc tagcggaggt aagtttatca atggaactgg
      301 aagtattgct acaaatggca atataatgaa tatcacagga gataaaacac acaatgtgat
      361 tgcttggggc ggtggattta atatcggaaa agacaatact gttaatttca ctacaaatgg
      421 caaaaactat ttaaatctag attataccaa caaagcttct caaattctag gaactttaaa
      481 tggtggaact aacaatgttt atattgtaaa tcctagtggg gtattagtag gcgaaggagc
      541 tacaatcaat gccaataaat ttggagtttc tacaactcca atgggtatag atgcaatcaa
      601 tactttttca gtcgatgatt ctttttctcc agtttttaat gccaataaag gcgatgtggt
      661 taatatggga actattaaag ccaatgaaat tgttttagta ggaaacaagg tagaaaatat
      721 aaaaggaaca cttcaagcag ataaagtaga tatcaaggga gataaggttt atttagaaga
      781 ttttggaatc aactctactc atttaaaagc agaaattggg agtgaaggct tttttaaata
      841 tgaggtaaaa gatgtatatg atgcctataa agatgattca aatttagttg ataattatga
      901 gtttactggt actgctacta ctaatggaaa ttttaaagaa tacctttaca ttggatctca
      961 aagtgcaagc aatgaagaga tgattaattc ttggaaagga tttgcaaaat tagtcaatga
     1021 ggggatattt ggagaattaa aatttaaaga tgtatattta ggcaaagata ttgattttgc
     1081 aggtgctagt acaatcaatc ctgtggggtt tggtaatggt tttgtaggta atttttatgg
     1141 taataaccat acactttcta atatacaaat tgatgttgct gataaaactt atgtaggatt
     1201 atttggttat attaagggtg ggagtgtgca aaatttaact attgatggat tgcaatttcc
     1261 caaatatgcc ttttcttata aatacctagg aggacttgca gggcatatag aaaatggaac
     1321 ttttaataat atcagtttaa aaaatctagg caacattgga gttgcgaaat atgcaggtgg
     1381 ctttgctggt caaattaacg gtggagattt ttcaagtatt attttaagta atatagaaag
     1441 tatttatggt aagaataatg gtgggggttt tgtaggatat acaacgggta atacaacttt
     1501 tgatggcatc agtttaaaag atataagatt tattaaatct ggggctttta caggtggttt
     1561 tgcgggaatg acacaaggta atgtgatatt tgagaatatt gttctaaatg atttagaaga
     1621 gattagtggt agtcatgcag gtggctttgc tggatggata aatgatggaa cttttaacaa
     1681 catcatttta aataatatag aaaaaatcag tgttagcgct acacataaat atatctttac
     1741 aggtggcttt acaggatatg caggcgctgg aacttataaa aatattattt taaataacat
     1801 aggagaaatt agcgccaatg gtaccgctag tctggatgaa aaatctattt atgcaggtgg
     1861 atttgttgga aatatagaga atggtagtaa cattgccaat tctaatattt acttctatgg
     1921 gttattaaat tcatcgtcga acaagaatta tattacccac aatgaaaata tcctaaatct
     1981 atcaaataca actgattttc aaacttttat taatcaaagc aaaattgcag gtttggagta
     2041 tcttacaaat acttccacta gcaactccca tcttcatatg ataaatggtg gtaaaatagg
     2101 aaatgagaaa tccaaaatca ccttcgataa ggataatttt acttacaata ctccaaaaat
     2161 atcagaggta gatcccgacg gatcaggatc aagctcttca cctacagctc caaacgaagg
     2221 agagctttca agtattactc ttgaacagag tgattttgaa gatgaaattt taaaaaccat
     2281 catcgatgaa attttaaatg aggattatgt gttaaatata gattctatcg attttaacaa
     2341 attcaatgaa ggtgatgtgg ctattctttt atatctatta aaaaatacaa gcgataaaaa
     2401 gctaaaagaa tctttaaaac aatccttaga attctatact gaatttaaca aaggaggatt
     2461 aaaaacagaa tttgaaaaat ggtatggaag tgatgaaagt acttacaaaa cctctatggg
     2521 taaatacaat tatatcattg agagtcttgc caatctaaaa gagtatgtaa acactacttt
     2581 aaaacctgaa ttagaaagta ttaaaaacaa tctcaatcga ttggaatttt taaaagctga
     2641 aataaaaaga ttagaaagag tctatcaaaa agctatgcaa aatgatttat ttccttatga
     2701 tcagttagaa gttgtctata aaaacacaca agaaaaaatc gatgcttact atgctgaagc
     2761 acagggttta ttggatattc ttaaaaacaa aaataaacct tttttagacg atttaattac
     2821 taaagaatat tcatttgaag ataaatatac tgatattcaa gggacatttg ctatcgcagg
     2881 aagtagtatt gatgctaatg ccatcgaaaa tttggcagat aaacctattt tatctcttcc
     2941 agaaaatgag aattcaggag atagccaaac tacaaacaac acagatagca cagatatagt
     3001 taatactttt tctaaacaag taaaacttac ctctacagag tctattctta ttcttcctgc
     3061 agaagaaaca caaagtcata tcaaagaaga cgaaagagaa cgaggaagag tttgcatcac
     3121 aagtgacaat gcaaaaacta ataatccttg tatagcaatc acattttaat cacaaagaaa
     3181 gtaaaagctt tctttgtgag ataaacaaga ttttaatcaa atataatttc aatttattaa
     3241 gttgaggggg aaaataatgc aggtgaaatt ttttctaaaa aatagaatat ttttatcttt
     3301 tgcgagcgta gctttgatat ttaatagcgt atcgtatgca gcaagtcaag ctatatctat
     3361 aggcgataaa agatttcaaa ctccaaggca tagtttttct aatgaggaag tttgggattt
     3421 tgatgacaaa acctttaagc aaatcaatgg cactaattat tatggtgtat ttaaacaagg
     3481 acttgtaagc gacatcattt tggaagtttt taaccctaag cagtctttac aaggcgctaa
     3541 gcttgaaatt ttaactctta atcattcctc agaagaaatc ttggaagtgc aaagtatgca
     3601 tgctgctaac cctatggata aaaacttgca tcctataaaa atccttcctt ttttagtgac
     3661 cgggagttct ctaaagggag attctatcaa caataaactt cttattaaag aggcagaatt
     3721 aagctctgcg gtttttctag agccaagcaa cataaaaaca aaaaatcctc caaaaaaaga
     3781 agagaaagat aaaataaatt atgttattag tggtgggctt gctagagaag gaaatgcgaa
     3841 aaataatacc ttagaacttc ttgatggaag ttatataaat atgggagtag aaaatattta
     3901 taatcttaaa ttaaacggag ctccttatgc tgtaggaggg cttgctatct ttggtgatgc
     3961 gataggaaat tctttgcttg cccaaaaagg ctctaaagta gatattcaca ctgcctcttt
     4021 ttatagagat atggtagggg aatttattct tgatgaaagg ataacccatc ttgttggagg
     4081 attagcctat aatggaaagg ttgaaaaaaa taaacttaat cttaatgggg tggaattcaa
     4141 catccatgct ccaagcggtt tgtattcttc ttttgctcct gttcatatcg cgggagcttt
     4201 tgttgatggg aatggtaaaa aagcttatga tgcaaccaaa aacacccttg ttatagataa
     4261 ttttctttta aatttaagag cggatggaaa aactcccatt ttttataacg ctattttttt
     4321 agcaaatttc tttggaggaa agacaaataa agaggatgca aatgcaaact ccattgtctt
     4381 aaaagatgtt cctgcgctaa aaagaataag taaaaaagtg aaagtacaag ggatttatga
     4441 tttctttagt ggatacacac ttgatgggga ggctaatttt aataccttag atatcgagtt
     4501 aaagtcccct ttacaagtga gtaattctta tttaagacac agcggttttg ggttttatgg
     4561 tgcttttgta agcaagggtg caagcaataa taccattaag attagaaata acctcacagt
     4621 aatcaatggc acacaaaatc ctagtgatag gatcaatatc attacaggaa gaactttagc
     4681 aggagaggct aattttaatg tgattgattt taaagattct caagcttctc taccactttt
     4741 tatttatgca accacacaag aaaactttga aggatctatc cattatccag agtatgcaaa
     4801 acacaataag attagcttaa ataatgtctt tggaagaaag gatattcgct ctggagtaga
     4861 ggctatgaat gtagaaaaca atcaagtctt ctatcacaat gtagaagcac aagcttctgg
     4921 agagggagtt aatagagaaa gcagtgtgta agcagccaat ctttcaaaga ataatctctt
     4981 taaagcaagc aattattggg cgacttctat gcttaatatt tatggtattc gtgaggtgga
     5041 agaatctaaa aataatcaag ttatttttaa taatgtaggc tttaatactg atagaatttc
     5101 tgaaggttcg gaattgattt taataggtgg agttggcaag agagtacatc acaatctttt
     5161 aagtattcaa gatttagaaa ttggagctta tgataaagaa aaagatttta tctatattgc
     5221 agcaagtgca attcctgatg ccaatagcaa tctagcactc tcttatggca atacactcta
     5281 tattggtgga gatgtttcta tccatgagcg atcgctttta aatgtgctaa gtgggagtgt
     5341 gattagaatt ccaaactata caaataataa agccgatgat atcacactgc ctgcaccttc
     5401 tttggcgcag cttacaaaag ataactattt gattttagag caagctctga gggctagagt
     5461 agttaataac tttgaacatt atagtttaat ttatcattct aataatcaag ataaaccttt
     5521 tattgaaagt ttagagactc ctattaatct ctctgaagaa tcctaaatca ctctactttt
     5581 aaaaaaggga gaaaaagctc ctgaaaaagg aagtaaaatt gcattaattt caagtcaaaa
     5641 tggttttagt ggtattaatg gcaatgctat gaataaaagc caattaaatc aactcttagg
     5701 gaggatttct aaaaatccaa aaacacttaa ttataaaaag attcctcagc tccaacaaga
     5761 aaacctaagg gttgttcctt taactttatc tttagataat aaaggaaaag tgatttatgg
     5821 agaaatccaa agtgattaaa aatcaataac ttaacaaaga aaattttaaa agaaggacaa
     5881 aaaatgaaaa aaatattagt gggtttaaaa ttgtgtgtag gagtatgcat agcgaatgat
     5941 atcctaatca aaaagggaga gaatctttat aaaaaatgta ttgcttgtca tggcgtaaat
     6001 ggagataaaa tagctcctgg aagcaagggt aatatcaaaa tcggaggatt aaataaagcc
     6061 tatctcataa aacagcttca aggctatgct gtagggaaag cagataatgg gggagcaaaa
     6121 gttatcatgt atgctaatat gaaaaattgg aaatttacca cttccgatat tgaagcagtg
     6181 agtgcttata tcgcccaatt gcctaaagca aaataaaaaa tacaaagcaa ggaaatttat
     6241 ggaaaaacct tttttaaaga gtatcattct agcttcttgt cttttaacaa gagcactttc
     6301 gcaacaaaac aaagaaaatg cagaagcttt agagcaaatg atagagattt cccattataa
     6361 aaatgtccct caaaacgaaa acattcaaaa tactctaaaa agtaaacaat cccctttaga
     6421 tattaaaatg gataaacaag attctttaca agaggatact aagaaagtct tagataaaga
     6481 gggattagta gcaccaagct ctgaagaatt tcgctttaaa tataaattct ttgtggatac
     6541 taaagaggat ggaaaaacac tcactttaga agatcttgga atcaatgaag tatggcttag
     6601 agaatctatt attgctctaa aaagatcgga tttaaatgta gaaaccttgc aagaaattgt
     6661 caatatcgtt tcttattatt ttcaatacca tggttatcca tcggcaactg cctatattcc
     6721 tcaacaagag atcacagatt caatccaaat taatattatg ctaggaaaac ttggagaata
     6781 tcaagttaaa aattattcta agcatctaaa agagagtgct attagctcta agctaaaaga
     6841 atcactccaa ggaaaaattt taagaactaa agcattggaa gatgcgattt ataaaatcaa
     6901 tgaaatgtca ggaattaaag caagcggaag tttagttgct gggagtgagt acgaaactac
     6961 agatgtgatt attacaatag aagattccaa aaaagcaaat gcgatacttt tctttgataa
     7021 ttatggaagc aagggctctg gtgtttatag agctggtgtg agtggcgctt taaataatct
     7081 cttaggatat ggagattctc ttaattactt tgcacaactt tctgatgaaa tgcaaaaaag
     7141 ttatggattt acttataatt ttttcttagg aaatctcaaa gtttctccta gagtgaataa
     7201 aagcaattat gaattaggag aagaatacga aagtttaggt gcttatggaa gttctttaga
     7261 tttaggggtg gatttatctt atccactctt tatcaacaca actaattctc tatatcttac
     7321 tggaggttat gtttatagaa agcttgaaga tatttatgga agctttggaa ttgattttaa
     7381 caaagaaagc aatgcctttt atttaggaac tgaaggaact ataggtttaa ttcctaataa
     7441 cattcttagc tataacacgc aacttactta tggggatata aagccaaaaa gtgtattttt
     7501 agaaaatagt cctgtcatgg gagaattttg gaaatttaat gcagcttcga ataatgctta
     7561 ttattttaat aataaaattt cacacattct taatattagc tatcaaaaaa ctatcggaga
     7621 ttatcagcta gattctagtg agactgcgac tttgggagga gcttacggcg ttagagctta
     7681 tcctaatgga tttggagagg cagatagtat gattttaaca acaattggac taagatttaa
     7741 tatatttaat cctaattttt acattacccc ttttttatga atttgcccat ggatggaatg
     7801 aagattattt agataatgat atcaatatgg cgggtagaga aggaaaaaat gatatttttg
     7861 tggatgcagt ggggttggaa ttgctttata ttaaacccaa tggattttat attaaactag
     7921 atttagcaaa ggcagcttat aaatacgaag cagatggaaa aagaagagat agactctata
     7981 caagtatggg attttatttt taaggctttt aaatcaattt tacagccaag aaactttatc
     8041 gcattgtgat aaagtttcta taaaagtttt tattcaggtt ttttgaggtt cttaacgatt
     8101 ttatctatct ttttacttgc ttttgaataa tctccgtcct ttagttcttc taaggcttcg
     8161 atagcaaaat caaaatcacc taaatcatct gattcctttt gaagattttc cacaacctta
     8221 tctatctttt tacttgcttt tgaataatct ccgtctttta attcttctaa ggcattgact
     8281 gcaaaagaaa aatcttcaat ttcgttaaga taggcttcta aggcttctct aactatactt
     8341 gatttaggct tggaaagatt tttactcaaa ttatctaagc gttttttaag ttctaaaggc
     8401 attctaaggg aataatttct agtttcttgt ttcattaact taacctttct aggaatgttt
     8461 ttgaaaaaat gtaattgctt gcttacagat tttgcaagtg aatttgtgcc cttgtaattc
     8521 aattttttga tggataccat aagggacatc atgtacttta cctgggcaat tgcatttata
     8581 aagataaaat tgcggcttgt catcatcact atcatctgct gctttaaagc tgacatcttt
     8641 accttcatct gttgctaaag aagagcttct ccatttttct accttcatgt cttcatagag
     8701 tatgtgctct aaaagccatt ttttcgctat gatgtaaagt ttttccttaa gatcatttgt
     8761 agatttgata tctttaataa gattaatcat agtttgtatg atttctttat gaattttttt
     8821 atgttcttca aatgctggat aagcaatgag ttgcatatat ttttcttcat cattaaaatg
     8881 atctttcatg taattgaaaa attcagccaa aagctctttt acttcatttt tgcttaccga
     8941 tctatcagaa acaatttcaa cctttgctgc aagctcaaaa agttttttat gctgatcatc
     9001 aattttggca ttgtgcacac taaaactgct atcccatttt ggaagcattt tgactccttg
     9061 aaaaatttat ttgcattaaa gattataaca taaaaataag ttaaatataa attaatttgt
     9121 attaaaccat tttttcaata ttttttgata caatttcaag aaatatcaaa gaaaggtgtc
     9181 ttgtggcagc tagaattctg cttttagaag atgatttaag tttaagtgag attatagaag
     9241 aatttttaat cgatgagggt tatgaagttt atttatgcac caatgctaaa gaagctttag
     9301 aacttgctta tgaaaaacat tttgatttgt ggatactaga tgttaaggtt cctttgggtg
     9361 atggattttc tttattaaaa gaattaagag cttgtggaaa acaaactcca gctattttta
     9421 tgacttcttt aaatacgaca gaagatttga aagagggtta taatgcaggt tgtgatgatt
     9481 atatacgcaa gccttttgag cttgcagaac tttcaattcg tattcaagtt ttgttaaaga
     9541 gagctttttc tcataaaaat gaagattatg aagatttggg gaatgggttt aaattcagct
     9601 ttacctcaca aattctttat cattttgata aggctttaac tctacccagt aaagagatca
     9661 agctattatc tttgctttta aaaaataaaa ataatttttt aagtacagaa agaatctttg
     9721 aagagctttg ggagtatgat gaagaaccta gcgagcttag tttaagagcg tatattaaaa
     9781 atttacgcaa aatattagga aaagaaaaaa ttatcaatca aaggggtagg ggatattgct
     9841 atggctaaaa aagtcattag gcaaatttta ttgatttatt taactactac gggtattttt
     9901 ttagcaatct tttttacctt atggtatcaa aaattatatg aagaattagt ggttgtaaaa
     9961 ggtacttctt taagagaaaa tcatagaaat atcattataa atatcctaaa ttctcgtttt
    10021 gttcctatga atgaaagtgc tagcaatatt gctcaaagta ctggacttaa atttgctatt
    10081 tttgataaaa aacaagctat ttttgataat ttggattttg attttagaaa agcaaaggtt
    10141 gaacttaagg gcaggggaat ttacgatgga aaagtatttt ttcttgatcg tatgaataca
    10201 gataattatt ttttaaaaca tacaaatgaa gataatgcaa atactgaaag tagattgaaa
    10261 attttaattc aaggtgagga tgttaaaaag gatcttattt ggattagaat aaaggttttt
    10321 tcttttgcta ttatggcttt ttgcatattg ggtttgatag cttatatttt agtaaaaatt
    10381 gccctaaagc cactagagga taagattatc actcttaatc ggtttatcaa agattcaacc
    10441 catgagctta acaccccttt aagtgtgatt ttgatgagta tagaacaact tgaaaatcaa
    10501 aaactagagc ataataccaa attcacaagg ataaaattag ctgcaaaaag tttatctcaa
    10561 gtgtattcag atcttgtttt ttataatttt cccaatacct tagagcttaa caaacaagaa
    10621 cttgacctaa aagcattgat tgaagaaagg ctagaatatt ttaaaatatt ttttgagcaa
    10681 aagaaaatca gtctaaagct taatttacat caagcaagta ttttcgcttc taaaaaccaa
    10741 atttctaaac tcatagataa tcttttaagt aatgcaatca aatacaacaa aaaaggtggg
    10801 gaaatttcga tagagttaaa aacaggtttt ttaagtatcg cagacacagg ttgtggaatt
    10861 tcaaaatcaa atcttaagca tatttttgat agatatgcga gatttaatac cgatcaagga
    10921 ggttttggca tagggctttc tttggtgaaa aagatttgcg atgataatga tattaaaatc
    10981 atttgcgaat ctgtagaaaa tcaagggagt gtttttgagt taagctggag tgcaaagaag
    11041 atttgaaaaa ggacaataaa atttttgcat ccacttgctt gaaactctct ataaa
//
LOCUS       DBBXOW010000061        10763 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.062, whole genome shotgun sequence.
ACCESSION   DBBXOW010000061 DBBXOW010000000
VERSION     DBBXOW010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10763
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.062"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..651
                     /locus_tag="ACJE1S_001483"
     CDS             <1..651
                     /locus_tag="ACJE1S_001483"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HGG0807021.1"
                     /translation="NAMDKVVFITGGSTGIGNACVHKFHNEGYKVAFMDINQEEGQKI
                     ANNLKDVLFIAGDTKNKEDIKNAVARAVEKFGNFDVISLNAGIHRCNTILDISDEELD
                     LIIQTNIYGYVNTMRIAIPHMKKEGGSIVINASDQCFVGKPNSFAYGLTKGALGQITK
                     SLSLDLAPKIRINAVCAGTIKTPMAERLFQDFANITHGGNTDFYWQNEAEKYPLKK"
     gene            678..767
                     /locus_tag="ACJE1S_001484"
     CDS             678..767
                     /locus_tag="ACJE1S_001484"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807022.1"
                     /translation="MYFLASPKASFITGELYLIDGGLTAGIPH"
     gene            845..1993
                     /locus_tag="ACJE1S_001485"
     CDS             845..1993
                     /locus_tag="ACJE1S_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0814 family flagellar-dependent secreted
                     protein"
                     /protein_id="HGG0807023.1"
                     /translation="MINGINSYSSYNYTNTFSNNTSNTKSSNTVNETSNLVSDKSGAV
                     NKVLGYGVDENGFFTSDFNEAAGLPKDYKIYAKDIENFVNIQTKSLLSSYINIDIAKS
                     IGNAYKVFSQLLNDELNNKINFTKEDLVKIPQGFEFNQNTLEINKKYNLNDKEYKDFM
                     SNYQNYSPTSHNIKIMTFFSLDDKSDIFKYSLIDPTPYSNNDKTITKSGIFMTFFTGF
                     QAKNYFIEGQTSILGKMQGFDKTMSQSEIDNLNKFISENSMNFKGDIFKLFDLLNSDM
                     SIDDFKQKILEQKENLNNPTKNTNNKETSEEDKKKPFKPIQAQSSSETYKDDNKMNEL
                     LKKLLENKFGTSDELEILFGMKFSDDDTGEFNKILSLNSAPKSIDIKA"
     gene            complement(1990..2148)
                     /locus_tag="ACJE1S_001486"
     CDS             complement(1990..2148)
                     /locus_tag="ACJE1S_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002793652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807024.1"
                     /translation="MFKYLIRDFKDLKALQKAKDKAEELFYLDSEMVENSKKMQGILK
                     GLIDKNNS"
     gene            complement(2360..3559)
                     /gene="metK"
                     /locus_tag="ACJE1S_001487"
     CDS             complement(2360..3559)
                     /gene="metK"
                     /locus_tag="ACJE1S_001487"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HGG0807025.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGYFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAKEYMPAAISYARALCDKVYAYAKA
                     HPQELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSVPCVESMKIEDLRALVNKLIL
                     ESDLPKELFNPEKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYAPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCLGTNTEVN
                     DDVLSDFVMKNFSLTPNWIRDKFGLDKPSKDTFLYADVAARGQVGQKDYPWEKLDAID
                     QFKTLIK"
     gene            3711..4934
                     /gene="sstT"
                     /locus_tag="ACJE1S_001488"
     CDS             3711..4934
                     /gene="sstT"
                     /locus_tag="ACJE1S_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HGG0807026.1"
                     /translation="MFSKLVQSYAKGSLILQICAGIILGILVGISSKEIAEVVNLLGV
                     LFTNALKAIAPILVFILILTSICTRDFSQSSSKIRNIVILYIVGTFLAAACAVIASFM
                     FPVELVLEGVQKAENTSPMHLNEIFKNLLLNIVDNPINALSSGNYLGILAWAIGGGIA
                     LKNCSQEAKQIFVDINEGVLKIVKFIVKLAPFGIFGLVANSVAQTGAQGLLSYAKLLV
                     LLVLTMLFVAFVINALIVFIYTRKNPFPLIFICLRRSAFFAFFTRSSAANIPVNMALC
                     AKLGINKEFYSISIPLGATINMAGAAVTIAILSLSAAHSVGIQVSFLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVVQDSVETALNSSTDVL
                     FSAICSKDELNYDIR"
     gene            4940..5821
                     /locus_tag="ACJE1S_001489"
     CDS             4940..5821
                     /locus_tag="ACJE1S_001489"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HGG0807027.1"
                     /translation="MRHLITTKDFTNDEIMELFEEARNFLDEKPRTLLEGKSVTTIFF
                     ENSTRTLSSFESAARRLGARILRLDVSRSSSSKGETLYDTATNLDAMSPNAIIVRHAN
                     SGVPHILASHMHCPVINGGDGKHAHPTQALLDLFTIYEHFKGDIKGRKILIVGDIKNS
                     RVASSNAELLTRFGLDITFVAPPHFMPHSPLKKSYSLNEDLISKTDIIMSLRTQTERH
                     NKIIYGSLKDYANDFCIKLDLIKDKKLILLHPGPVHRNIDISDEVMDDERALVLKQVK
                     NGVAIRMAVLKKLILES"
     gene            5831..7546
                     /locus_tag="ACJE1S_001490"
     CDS             5831..7546
                     /locus_tag="ACJE1S_001490"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HGG0807028.1"
                     /translation="MLTWDLGVLFKNEDELENTTQNYIQQSKEFKKNYSTTLDKLNPD
                     DFLNALKEYEHLHLILSKIMTYAYLCFAKDSSKGSFYAKYEQECKKIEENLLFFELEF
                     CELSEEKTKELIKFCKGYDFYLQNLLQNKRYNLSQKEERIMLYLSNTGANAFSRLFDE
                     SMTALKIPFEGNKLSEEEILSKLYNNDRKIRKKAAKKFTKALDKNLNLLTFIFNMIKT
                     ELNNICKLRGYESAETPRHLQNQITQQSVDSLIQTTQKHFYLVSNFYKRKKQILGFNK
                     LKDYDRYAPIGKEAKFSFEESKKIILNAFYDFSPVFGDIAKEAFEKGWIDVYPQDKKQ
                     SGAFSHSATPDTHPFILLNYTDGRRDLFTLAHELGHTIHQKLSYNVSFLNQNTPLTTA
                     ETASVFAEMLVFDYVKNKLKKEELLALYAAKIEDIFATLYRQINFTCFERRIHANENE
                     LKSEEISQIWMEESQKMFGESVELSKNYALWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSNACSNFKELYIKILSLGGSVSPKELVGMFGFDIEDKSFWEIGIVEIKKLIDE
                     FMRLK"
     gene            7546..7983
                     /locus_tag="ACJE1S_001491"
     CDS             7546..7983
                     /locus_tag="ACJE1S_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807029.1"
                     /translation="MIEKILENENFIALMQKNCYDLLSILIQENIEFSIVANTNFIDF
                     DPVLPENLDVKQNPFALFVLGGYTFESIQLEKDHIQFHAGFGPDDFASYVKVDLGAIT
                     QIQVENSVLFVNFSFYKRKDNTKSQKSKNIFLNNPKNKDIFKK"
     gene            7980..10040
                     /locus_tag="ACJE1S_001492"
     CDS             7980..10040
                     /locus_tag="ACJE1S_001492"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HGG0807030.1"
                     /translation="MNLFTGLNESQKEAASHIDGPMLILAGAGSGKTKTITTRLAYMI
                     GEVGIPAINTLTLTFTNKAASVMKNRALSLLNSNENPLLCTFHKFGLLFLKLHIERLG
                     RKNNFIIIDNDDSKKILKELINDDKTSPHQILQFISHFKNESKSVQDVFNDLELLKDN
                     EIKHQALQKIAIYYQNYQEYLLKHNFVDFDDLLLLTNILLENDQNFAKEQSSFYRYIT
                     VDEYQDTNALQYKILKNLCCVHENICVVGDDDQSIYSWRGAKIENILNFQSEFSNVKL
                     VKLEQNYRSVGMILKAANNLISHNKKRLGKTLLCTKDEGEDIQILSSDNEKIESALVA
                     KKIKELLNSGIYAGEIAVLFRINALSRSIEEAFMKEKIPYKLLSGMRFYERLEIKDLI
                     CYFRILINPNDDLSFKRIINRPKRSIGEKALQNLEDYAQKRKISLFEALCESDGSVGI
                     FSLKKAQNEAKKFIQNIYELREYSDLKKMIEKFEELFALKEFYALQEDGDERVLNIDE
                     FYASIKEKIKEEPQTTLEDILSEISLLSDQDGIEGECVYLMSVHASKGLEFDHVFIVG
                     LEEGFFPLNESDIEEERRLAYVAITRAKKCLSLSIAKSRFYRGSRTELDSSRFLEESQ
                     LTKKISINKTEQGYHKGDLVKHKIFGIGRVISVNKSAKEEKLTINFGGIERIIMASFV
                     EKAV"
     gene            10037..>10763
                     /gene="truB"
                     /locus_tag="ACJE1S_001493"
     CDS             10037..>10763
                     /gene="truB"
                     /locus_tag="ACJE1S_001493"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HGG0807031.1"
                     /translation="MNKIFVAFKPAEMSSNAFLGQIKKRYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYQATLWLGVKSLSLDNKNIQEIKLIKAFDIKLLEQIK
                     MELLGKISYTPPQFSAKRIEGKRAYEFAKRGENIELKSCIMEIFSCKIIHYTHPFLQL
                     ELSVSEGAYIRSYCELFAKKLGINATLSSLERTREGEFFYNHEKSLNVLEYLNLKPNF
                     IKDLTKLENGTKISLEELKFQDEG"
BASE COUNT         3931 a         1626 c         1695 g         3511 t
ORIGIN      
        1 aatgctatgg ataaagttgt atttattaca ggaggctcta ctggtattgg caatgcttgt
       61 gtacataaat ttcataatga aggctataaa gtagccttta tggatatcaa tcaagaagaa
      121 ggacaaaaaa tagcgaataa tttaaaagat gtcttattta tagcaggaga tacaaaaaat
      181 aaagaagata ttaaaaatgc tgtcgctaga gcagtagaaa aatttggaaa ttttgatgta
      241 atttctttaa atgcaggaat tcatcgctgc aataccattc ttgatattag cgatgaggag
      301 cttgatttga ttattcaaac caatatttat ggctatgtaa acaccatgag gatcgccatt
      361 cctcatatga aaaaagaagg cggaagtatt gtaatcaatg cctctgacca atgttttgta
      421 ggaaagccaa atagctttgc atacggactt actaaaggtg ctttaggaca aataacaaaa
      481 tctttaagct tagatttagc accaaaaatt agaataaatg ctgtatgtgc aggaactatc
      541 aaaacaccga tggcagagag attatttcaa gactttgcca acattacaca tggtggaaat
      601 acagattttt attggcaaaa tgaagcagaa aaatatcctt taaaaaagta ggacaagcca
      661 atgaagtagc cgaactgatt tattttttag caagtccaaa ggcaagtttt ataactggtg
      721 aactttattt gattgatggt ggattaacag caggaattcc tcattaaata caatttttac
      781 ttaagaaaaa atcatttttg ccgatttatc ttgtaaataa agtttgattt ataaggtggc
      841 aaagatgatt aatggtataa attcctattc aagctacaat tatacaaata cttttagtaa
      901 taatacttca aatacaaaat catctaacac tgtaaatgaa acttcaaacc ttgtaagcga
      961 taaatctggg gcagtaaata aagttttagg ttatggagta gatgagaatg gcttttttac
     1021 aagcgatttt aacgaagctg caggcttacc aaaagattat aagatttatg ctaaagatat
     1081 agaaaatttt gttaatattc aaacaaaaag tctattatca agttatatta atattgatat
     1141 agcaaaaagt ataggaaatg cttataaagt attttcacaa cttttaaatg atgagttaaa
     1201 caataaaatc aattttacaa aagaagactt agtaaaaata ccacaaggtt tcgaatttaa
     1261 tcaaaatact ttggagataa ataaaaaata taatttaaat gataaagagt ataaagattt
     1321 tatgtctaat tatcaaaatt actctccgac ttcccataat ataaaaataa tgactttttt
     1381 ctcacttgat gataaaagtg atatttttaa atattcttta atagatccta ctccttatag
     1441 taataatgat aaaactataa caaaaagtgg tatttttatg actttcttta ctggatttca
     1501 agcaaaaaac tattttatcg aaggacaaac aagtatttta ggcaaaatgc aaggatttga
     1561 taaaactatg agtcaaagtg aaattgataa tttaaacaaa ttcataagtg aaaatagtat
     1621 gaattttaaa ggagatattt ttaagctttt tgatttatta aattcagata tgagcattga
     1681 tgattttaag caaaaaatac tagaacaaaa agaaaattta aacaatccta caaaaaatac
     1741 aaataacaaa gaaacttcag aagaagacaa aaaaaagcca tttaaaccta tacaagcgca
     1801 aagttcaagc gaaacctata aagatgataa taaaatgaat gagcttttaa aaaagctact
     1861 ggaaaataaa tttggcacaa gcgatgaatt agaaattctt tttggtatga agtttagcga
     1921 tgatgataca ggagaattta ataaaattct ttctttaaac tctgcaccaa aaagcataga
     1981 tattaaggct taagaattat ttttatctat caagcctttt aatatccctt gcattttttt
     2041 agagttttca accatctcac tatcaagata aaataactct tcggctttat cctttgcttt
     2101 ttgtaaagcc tttaaatctt taaaatctct tattagatat ttaaacaatc gcttgtctgt
     2161 ttttctttct gcgattacaa ataagctttt tctgtctttt tcatattcat aagaaatgga
     2221 ctatcatacc ttgtatcgtg gatacttttg cctatatatt cttttacaat ctcaataagt
     2281 ctattgatga agtttgaatt ttaaattggt tttatattaa gatgaaattt aaagtatgat
     2341 aagccttgaa aaacaaggct tatttaatta aagtcttaaa ttgatctata gcatcgagtt
     2401 tttcccaagg ataatccttt tgtcctactt gtccacgagc tgctacatca gcataaagaa
     2461 aagtatcttt gctaggttta tcaagaccaa atttatcacg aatccaattt ggggttaaag
     2521 agaaattttt cattacaaaa tcacttaaaa catcatcatt tacctctgta ttggttccta
     2581 aacaatctac acttacagaa gtaggtttag caacacctat ggcgtaactg agttgaacta
     2641 tacatttttt agcaagtcct gctgcgacta tatttttagc aagccatctg cccgcataaa
     2701 gtccacttct atcaaccttg gtataatcct tgctagattg cgcaccccct cctataggag
     2761 catatcctcc aaaactatcc actataagtt ttcttcctgt taaaccacta tcatgtaaag
     2821 aagagtgatt gacatatttt cctgttggat tgatcaaaat tctagttttt tcaggattaa
     2881 aaagttcttt tggtaaatca ctttctagga tcaatttatt tactaaagct cttaaatcct
     2941 ctattttcat actttcaacg caaggtacag aaacaacgat agtatgaata ctttgcggtt
     3001 tacaattttc aaaattagct tttgtaccat aatcaatagt cacttgagtt ttaatatcta
     3061 cacccaactc ttgcggatga gcttttgcat aagcataaac cttatcacaa agcgctcttg
     3121 cgtagcttat agctgctggc atatactctt tagcctcaca acttgcaaaa ccaaacataa
     3181 taccttgatc tccagcacct gtttcaccat cttcttgatc tacaccttga ttaatatcag
     3241 ggctttgctc atttaaaaat accataacat cgacttcatc aggatgcaaa cattgttctt
     3301 tactaaaata tcctgctcca tcatagccta tatttttcaa aacatcttta actaaattat
     3361 cgtaatcagc tttactaagc ttgtgatttg atttaacttc tcctcctatc acaaccttat
     3421 ttcctgcgac aaaaacctca ctcgccaccc ttgaattttt gtcatttttc aagagtatat
     3481 ccactattgt atcagcgatt atatcagcgc atttatctgg atgacctgca cttacgactt
     3541 ctgaagtgaa tagatacata aaaagtcctt tcataaaaaa tgagttacaa ttctaactca
     3601 aataaattta ttcaagctta atgctttaaa aaattcacta aaattaagca aaagttcgtt
     3661 aaaatcaagt ccgatatatt gcatcaaatt tcaaaataat aaaggttctt atgttctcaa
     3721 aactagttca aagctacgcc aaaggtagtc taatccttca aatctgcgca ggtataattt
     3781 taggcatact cgtaggaata agctctaagg aaatagctga agttgtcaat ttattgggag
     3841 ttttatttac caatgcttta aaagctatag ctcctattct tgtctttata ctcattttaa
     3901 cttcgatttg tacgagagat ttttctcaaa gtagttctaa gataagaaat attgtcattt
     3961 tatatattgt aggaactttt ttagcagcag cttgtgcagt gattgcaagt tttatgtttc
     4021 ctgtggaatt agtcctagaa ggagttcaaa aagcagaaaa tacttctcct atgcatttaa
     4081 atgaaatttt taagaattta cttttaaata tagtagataa tcctatcaat gcactttcaa
     4141 gtggaaatta tttaggaatt ttagcttggg caataggcgg tggtatagct ttgaaaaatt
     4201 gctcgcaaga agcaaaacaa atttttgtag atatcaatga aggggtttta aaaattgtta
     4261 aatttatagt aaaactcgct ccttttggaa tttttggttt ggtggctaat tctgtggcac
     4321 aaacaggagc acaaggattg ttaagctacg caaaactctt agtattgctt gtacttacta
     4381 tgctttttgt tgcttttgta atcaatgcct taattgtttt catttatact agaaaaaatc
     4441 cttttccttt gatttttatc tgcttaagac gcagcgcttt ttttgctttt tttacaagaa
     4501 gctcagctgc aaatattcct gtaaatatgg cactttgtgc taaacttgga atcaataaag
     4561 aattttatag tatctccatc cctcttggag caaccataaa catggcaggt gcagcagtaa
     4621 ccatagctat actaagcctt agcgccgcac atagcgttgg catacaagta agttttttgc
     4681 aagccttttt attaagcatt attgctactt ttgcagcttg tggcgcaagt ggcgtggcgg
     4741 gcggttcgct tttacttatc cctttagctt gctctttatt taacatagac tatgatatcg
     4801 ctatgaaagt agttgcaata gggtttatca taggcgtagt acaagatagt gttgaaacgg
     4861 cattaaatag ctcaacagat gttttattta gtgctatttg ttctaaagat gagttaaatt
     4921 acgatataag gtaaatacaa tgaggcatct catcacaaca aaagatttta ctaatgatga
     4981 aataatggag ctttttgaag aagcaagaaa ttttttagat gaaaaaccta gaaccttact
     5041 cgaaggcaaa agtgttacaa cgatattctt tgaaaattcc acgcgtacac tctcatcctt
     5101 tgaaagcgcc gcaagaagac taggagctag aattttacgc cttgatgttt caagatcgag
     5161 ctctagtaaa ggcgaaacac tctatgatac agcgactaat ttagacgcta tgagtcctaa
     5221 tgctatcata gtaagacatg caaattcagg agtacctcat attttagctt ctcatatgca
     5281 ttgtcctgtt ataaatggtg gagatggcaa acatgcacac cctactcaag ccctacttga
     5341 tctttttaca atttatgaac attttaaagg tgatatcaag ggtagaaaaa tcttaatcgt
     5401 aggagatatt aaaaattcaa gagttgcctc ttcaaacgct gagcttctaa caagatttgg
     5461 tttagatatc acctttgtgg caccgcccca ttttatgcct cattcacctt taaaaaaatc
     5521 ttattcttta aatgaagatt taatctcaaa aaccgatatt ataatgagct taagaacaca
     5581 aacagaaaga cataataaaa tcatttatgg ttctttaaaa gattatgcaa atgatttttg
     5641 tatcaagctt gatttgatta aagataaaaa actcatcttg ctccatcctg gccctgtaca
     5701 tagaaatatc gatataagcg atgaagtgat ggatgatgaa agagctttag ttttaaaaca
     5761 agttaaaaat ggcgttgcta tcagaatggc tgttttaaaa aaattgattt tagaaagcta
     5821 aggagaaaat atgttaactt gggatttggg agtattgttt aaaaacgaag atgaattaga
     5881 aaacacaacg caaaactata ttcaacaatc taaagaattc aaaaaaaatt attctactac
     5941 tttagataaa ttaaaccctg atgattttct aaacgcttta aaagaatacg aacatttaca
     6001 tttaatactc tcaaaaatta tgacttatgc ttatttatgc tttgctaagg atagctccaa
     6061 gggttctttt tatgctaaat atgaacaaga atgtaaaaaa atagaagaaa atttattatt
     6121 ttttgaatta gaattttgtg aacttagtga agaaaaaact aaagaattga ttaaattttg
     6181 caaaggctat gatttttact tgcaaaatct tcttcaaaat aaacgctata atctaagcca
     6241 aaaagaagaa cgcataatgc tttatctttc aaacacagga gctaatgctt ttagtagatt
     6301 atttgatgaa agcatgactg cattaaaaat tcctttcgaa ggcaataagc ttagcgagga
     6361 agaaatttta agcaagcttt acaataatga cagaaaaata agaaaaaaag ccgctaaaaa
     6421 atttaccaaa gctcttgata aaaatttaaa tttactcact tttattttca atatgatcaa
     6481 aacagaatta aacaatatct gcaaattacg cggatatgaa agcgcagaaa ctccaaggca
     6541 cttgcaaaat caaatcaccc aacaaagtgt tgattcgctg attcaaacca cgcaaaaaca
     6601 tttttacctc gtatctaatt tctataaaag aaaaaaacaa attttaggct ttaacaaact
     6661 taaagattat gatcgttatg cacccattgg caaagaggca aaattcagtt ttgaggaaag
     6721 taaaaaaatc attttaaatg ctttttatga tttttctcct gtttttggag atattgcaaa
     6781 agaagcattt gaaaagggtt ggatagatgt ttatccacaa gataaaaaac aaagtggtgc
     6841 tttttcacat tcagctaccc cagataccca tccttttatc ttgctaaatt atacagatgg
     6901 aaggcgcgat ctttttacgc ttgctcatga gttaggacac accatacatc aaaaactttc
     6961 ttataatgtt tcttttttaa atcaaaatac tcctttaact acagctgaaa ctgcttcagt
     7021 gtttgctgaa atgttggtat ttgattatgt taaaaacaag ctcaaaaaag aagaattgtt
     7081 agcgctttat gctgcaaaaa tcgaagatat ttttgccact ctttatagac agattaattt
     7141 cacttgtttt gaaagacgca ttcatgctaa tgaaaatgag ctaaaaagtg aagaaatttc
     7201 tcaaatttgg atggaagaat ctcaaaaaat gtttggtgaa agcgtggaac taagtaaaaa
     7261 ttatgccctt tggtggagtt atattcctca ttttatccat agcccttttt attgttatgc
     7321 ttatgcttat gcccagcttt tagtactcgc gctttatggg ctttacaaga gcaatgcttg
     7381 tagcaatttt aaagaacttt atatcaaaat actctctctt ggaggaagcg tgagtccaaa
     7441 agaacttgtg ggaatgtttg gatttgatat agaagataaa agcttttggg aaataggtat
     7501 agtagaaatc aaaaaactta tcgatgaatt tatgaggcta aaataatgat agaaaaaatt
     7561 cttgaaaatg aaaatttcat tgctttaatg caaaaaaatt gctatgattt actttcaatc
     7621 ttaatccaag aaaatataga attttctata gtggctaata caaattttat tgattttgat
     7681 cctgtgttgc ctgaaaattt ggatgttaaa caaaatcctt ttgcattatt tgtccttgga
     7741 ggatatactt ttgagtccat tcaattagaa aaagatcata tacaatttca tgcaggtttt
     7801 ggtcctgatg attttgctag ctatgttaaa gtagatcttg gagcaattac tcaaattcaa
     7861 gttgaaaata gtgttttgtt tgttaatttt agtttttaca aacgcaaaga taatacaaag
     7921 tcacaaaaat ccaaaaatat ctttttaaac aaccctaaaa acaaagacat tttcaaaaaa
     7981 tgaatttatt tacaggttta aacgaaagtc aaaaagaggc tgcaagtcat atcgatggcc
     8041 ctatgcttat actagcaggt gcaggtagtg gaaaaaccaa aacaattaca acgcgtcttg
     8101 cctatatgat tggggaagtt ggaattcctg ctatcaatac cctaacccta acctttacaa
     8161 acaaggctgc aagtgtgatg aaaaatagag ccttaagcct tcttaatagc aatgaaaatc
     8221 ctttactttg cacttttcat aaatttggct tattgttttt aaaactccat atagaaagat
     8281 taggaagaaa aaataatttt attatcatcg ataatgatga ttctaaaaaa attttaaaag
     8341 aactcattaa tgatgataaa actagccctc atcaaattct tcagtttatc tcacacttta
     8401 aaaatgaaag taaaagtgtt caagatgtat ttaatgatct agaattgtta aaagataatg
     8461 aaatcaaaca ccaagccttg caaaaaattg ctatttatta tcaaaactat caagaatatt
     8521 tactcaagca caatttcgta gattttgatg atcttttact tttgaccaat attcttttgg
     8581 aaaatgatca aaatttcgcc aaagagcaaa gctcttttta tcgttatatc acagtcgatg
     8641 aatatcaaga taccaatgct ttacaatata aaattcttaa aaatctttgc tgcgttcatg
     8701 aaaatatatg cgttgtaggg gatgatgatc aaagcattta tagttggcgt ggtgcaaaga
     8761 tagaaaatat tttaaatttc caaagtgaat tttcaaatgt aaaacttgtt aaattagagc
     8821 aaaattatcg ttctgtgggt atgattttaa aagctgctaa taacctaata tcacacaata
     8881 aaaaacgtct tggaaaaacc ctactttgca caaaagatga gggtgaagat attcaaattc
     8941 taagttcaga taatgaaaaa atcgaaagtg cattggtggc taaaaaaatc aaagagcttt
     9001 taaattcggg catttatgct ggagaaattg ctgttttatt tcgtatcaat gctctttcaa
     9061 gatccataga ggaagccttt atgaaggaaa aaattcctta taaattgcta agcggaatgc
     9121 gtttttatga aagacttgaa atcaaagatc tcatttgcta ttttagaatt ttaatcaacc
     9181 ctaatgatga tttatccttt aaacgcatta tcaatagacc taaaagaagc ataggtgaaa
     9241 aagctttaca aaatttagaa gattatgcac aaaaaagaaa aatttcactc tttgaagcat
     9301 tgtgcgaaag cgatggcagt gtgggaattt tttctcttaa aaaagcacaa aatgaggcaa
     9361 aaaaattcat acaaaatatt tacgaactta gagaatattc tgatttaaaa aaaatgattg
     9421 aaaaatttga agaacttttt gctcttaaag aattttacgc tcttcaagag gatggcgatg
     9481 agcgcgtatt aaatattgat gaattttatg caagcatcaa agaaaaaata aaagaagaac
     9541 cacaaacaac cctagaagat attttaagtg aaatttcact gttaagcgat caagatggga
     9601 ttgagggaga atgtgtatat cttatgagtg tgcatgcgag caagggtttg gaatttgatc
     9661 atgtatttat agtaggactt gaagaaggat tttttccttt gaatgaaagc gatatagaag
     9721 aagaaagacg ccttgcttat gtggctatca ctcgcgctaa aaaatgtcta tcgctaagca
     9781 ttgcaaaatc tcgtttttac cgaggaagtc gcacggaatt agactctagt cgttttttag
     9841 aagaaagtca attaacaaaa aaaatctcta taaacaaaac cgaacaagga tatcataaag
     9901 gagatctagt caaacataaa atttttggca taggacgcgt tattagtgtc aataaaagtg
     9961 caaaagaaga aaaacttacc ataaattttg gcgggataga acgcattatt atggcaagtt
    10021 ttgtggaaaa agccgtatga ataaaatttt tgttgctttt aaacccgcag aaatgagttc
    10081 taatgctttt ttaggtcaga taaaaaaaag atataaaaat aaaaaggcag gttattcagg
    10141 aaccttagat ccctttgcca aaggggtttt aatagtcgcc tttgggcaat acactaagct
    10201 ttttagattt ttaaaaaaaa ctccaaaaac ataccaagca acactttggc ttggggttaa
    10261 atctctaagt cttgataata aaaacataca agaaataaag cttataaaag cttttgacat
    10321 taaactctta gaacaaatca aaatggaact tttaggaaaa atttcttata ctccaccaca
    10381 atttagtgct aaaagaatag aaggtaaaag agcttatgaa tttgccaaaa gaggtgaaaa
    10441 tatagagtta aaatcttgta taatggaaat tttctcttgc aaaatcatac attatactca
    10501 tcccttttta cagcttgaat taagcgttag cgaaggagct tatataagat cttattgtga
    10561 gctttttgct aaaaaattag gtattaatgc cactttaagt tctcttgagc gcacccgtga
    10621 gggagaattt ttttataatc acgaaaaaag cttaaatgtg ttagaatatc taaatttaaa
    10681 gcccaatttc attaaagatt taacaaaact tgaaaatggc actaaaatat ccttggaaga
    10741 attaaaattt caagatgagg gtt
//
LOCUS       DBBXOW010000062        10573 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.063, whole genome shotgun sequence.
ACCESSION   DBBXOW010000062 DBBXOW010000000
VERSION     DBBXOW010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10573
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.063"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            71..808
                     /locus_tag="ACJE1S_001494"
     CDS             71..808
                     /locus_tag="ACJE1S_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HGG0807032.1"
                     /translation="MQENHNFISFVLLDEAKFDFLKLKKILEDDFDIWIADENFTQDG
                     VIFSFKNMIVTLNLIKNPIPNNEAEYYANFNFMWKDALEQTQKHKAHLLVSVLSQSES
                     KLDQAKLFTQISSACLQDEHTLGFYTGGVVLEPKFYIENAKMLEDNRLPIYNWIYVSV
                     YPGDNGNNAYTYGLRNFDKLELEVCDANIEEKELFFTLYDIILHILTYDLSLKDDDTL
                     KFEDGRILSFKKSQGIGVENESLKIIF"
     gene            877..1293
                     /locus_tag="ACJE1S_001495"
     CDS             877..1293
                     /locus_tag="ACJE1S_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002833266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HGG0807033.1"
                     /translation="MKLKLGLAALLGATVLFARDIIVPASELPRNAQDFISKNFKTAQ
                     IALVKKDIDSYDVTLNDGTEIDFIITGEWKDVDGKYKALPNSILPNIMPKISASSNAQ
                     IIEVSREINGYKFELSNQLKIYTDAQGNILGQKFDY"
     gene            1564..2886
                     /locus_tag="ACJE1S_001496"
     CDS             1564..2886
                     /locus_tag="ACJE1S_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0003333 - amino acid transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transport family protein"
                     /protein_id="HGG0807034.1"
                     /translation="MNTPKWTRYDTRWVLSLFGTAVGAGILFLPIKAGVGGFWPVVVM
                     TLIIFPMVYLSHRALSRFVCQANGNDKDITHAAEEYFGRKVSIFISVLYFFAIFPICL
                     AYCVGITNTFESFIYHQFLPLLNSEGVFADIIRAMYEVSTDDKEKVVASLFPFYRLLL
                     AFILVSIFMLIMLFSEELITKVCEWLVYPLCAILFLFSLYLIPQWSFESFSAIPGTKE
                     FITIVWLTLPVLVFSFNHSPAISTFSLSVKREYPENSVQKANQILFRTSVMLLAFVMF
                     FVISCVLSLTPAELAEARAQNIPVLSYFANKLDNPFISYGGPLIAFLAISSSFFGHYF
                     GAREGAYGIVRKCCKLAGNENPDLKKIAVYSTLVMYIVMLITAYINPSILGFIESLGG
                     PIIAAILFLMPIIAIYTVSKMKKFQNKALDAFVFITGVLTIITVIYTF"
     gene            2897..4261
                     /locus_tag="ACJE1S_001497"
     CDS             2897..4261
                     /locus_tag="ACJE1S_001497"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HGG0807035.1"
                     /translation="MSNLNIFKIGVGPSSSHTLGPMLAGNLFCKKIAKKLEKIERIQI
                     ILYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLS
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTTAQLEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTTDPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLVAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVGGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSIPIVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(4321..4842)
                     /locus_tag="ACJE1S_001498"
     CDS             complement(4321..4842)
                     /locus_tag="ACJE1S_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807036.1"
                     /translation="MAFMSFSGFFYARNDLRLFKIEKKSEIKSFFYKDYTLASFKDEL
                     NLNNEIFFYQSLKENLFKENDEILISNLGKKIILFRNFTQNSDNFAEAKLKQVLLLIF
                     LFLASVFFASLAAINEFGAVDLVFLMICLLLLVMGIINLGLLFKQIRILKSFSKEEMK
                     EFLTQRMKKYAKK"
     gene            complement(4823..5803)
                     /gene="ribD"
                     /locus_tag="ACJE1S_001499"
     CDS             complement(4823..5803)
                     /gene="ribD"
                     /locus_tag="ACJE1S_001499"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HGG0807037.1"
                     /translation="MKNFYMNLALNEAWKYQFLTYPNPAVGCVILDKNEKILAIKAHE
                     KAGCAHAELNAIAHAFTNLNPEISLPQEANAMHEFICKNHRGIFKDSIAFVTLEPCSH
                     QGKTPPCAKLFSELGFKKIFISVKDENEIASKGAEFLKKQGVEIEFGVLKDEGKKLLK
                     PFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRSVIDLLVLGGETIRKDR
                     PILDARLCKGKAPNLCILSHQNLENFDKSIPLFSVPHRQIYTQIPNKAKFLMYEGGEN
                     FLKKFKDEMDMFLIFQSSSLNDEKNVTMPLNFKPLYRNFLGSDTYGIYEL"
     gene            complement(5805..7499)
                     /locus_tag="ACJE1S_001500"
     CDS             complement(5805..7499)
                     /locus_tag="ACJE1S_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807038.1"
                     /translation="MNNNEDTNKDIKMVYTPNGGGIKLNTKTNEFLFNQREKPTGKYT
                     KEYTKALLEAVNIVDNSPYKKFYEPKYLDPEFHTGEKSTLLEFKDWQKIYLKDPVKGS
                     LAPWTKAEKAYYNSLDGEGRYNYLVKRSGLVCTPIDLKDSALIRPKRPKEKRFINAYK
                     EGMKDYKEAKRLDYKGYDLFQKAIKNLSYAYEEGKDYKAGLALAELGYSKDYFRAIIG
                     KLDQDENNEALLDKLINEFLNANYRSIRIYEELIEKYDLGDAYWGLYVYSRKIEDTVF
                     DDRFYFAQLKDSSEELYKNAFEHGAYGAFGAKANTIYSDLIAGEYQLCLGILGNKKAF
                     YEAAVYLSDSGLKSRAFQALWLGVQLGDEKCLEGLYRPLYGIHENPLKRQLMKDFAKN
                     PPYDKYGMLPFLDELISTEWIIDPNEYDFIYDINNRVVTAMLNGIDKGKYKDPRDVDS
                     TPESRWEFDQEIDAYKEGSVRSYSYDLPNHWSEADVEIYLEELYLHAKLAALTPPQGY
                     PNAPRYYSPERLEFIYNKHKLDSKLDPRIPAIYRANFPEELRAKIRAFAKEHNIKE"
     gene            complement(7657..7986)
                     /locus_tag="ACJE1S_001501"
     CDS             complement(7657..7986)
                     /locus_tag="ACJE1S_001501"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807039.1"
                     /translation="MKKFILISSILSSFFIFAEANELPSDKIQPEVKVIKEHFKNKVE
                     KIEFEAWAKGMGLNFSTQKYLNNQNYKKYAKTMAKLIRKTRGVKGKVEICYEGTPQKR
                     VHKCNKF"
     gene            complement(8062..8149)
                     /locus_tag="ACJE1S_001502"
     tRNA            complement(8062..8149)
                     /locus_tag="ACJE1S_001502"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8113..8115),aa:Ser,seq:tga)
     gene            complement(8181..8254)
                     /locus_tag="ACJE1S_001503"
     tRNA            complement(8181..8254)
                     /locus_tag="ACJE1S_001503"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8220..8222),aa:Cys,seq:gca)
     gene            complement(8275..8363)
                     /locus_tag="ACJE1S_001504"
     tRNA            complement(8275..8363)
                     /locus_tag="ACJE1S_001504"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8327..8329),aa:Leu,seq:taa)
     gene            complement(8373..8447)
                     /locus_tag="ACJE1S_001505"
     tRNA            complement(8373..8447)
                     /locus_tag="ACJE1S_001505"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8413..8415),aa:Gly,seq:gcc)
     gene            complement(8507..9265)
                     /locus_tag="ACJE1S_001506"
     CDS             complement(8507..9265)
                     /locus_tag="ACJE1S_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807040.1"
                     /translation="MLAFFKGLGIGFLCLVLFVAGVIFNVEFLNKNKTTQTLNFSRSI
                     ETSMEAKPDIFHANINFWANENLSTQTFLSNEDKIQISNTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGVQTPKGQRLHANLECEFTADKLENFNKLLNDLNSIIAKSEFIGIST
                     PALEPKFSKQTLKDNKEKLYSELLKKAYSYEKIYSLDLNKTCILKNLNIESIPNFYPR
                     ALNSMKSADNMELSLPIIKDEEQSISGTALFICK"
     gene            complement(9318..9554)
                     /locus_tag="ACJE1S_001507"
     CDS             complement(9318..9554)
                     /locus_tag="ACJE1S_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin family non-heme iron protein"
                     /protein_id="HGG0807041.1"
                     /translation="MRVEQWRLGSLSSENGADITFEEIKDDEDEAVIYFYACECIGQI
                     HDVPSGIHKKIQNEGAKFKCKKCKFPLEFFKKGY"
     gene            complement(9575..9913)
                     /locus_tag="ACJE1S_001508"
     CDS             complement(9575..9913)
                     /locus_tag="ACJE1S_001508"
                     /inference="COORDINATES: protein motif:HMM:TIGR02481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG0807042.1"
                     /translation="MLPKWDKIYSVHNGRIDNQHKKLFELAAKVEHIFDKPVHRDEIK
                     ALLTDFFNYMKYHFDDEEKYMQFIRYPDFERHRQIHKEIIQSMIKIIQNIKTTNDLKE
                     KLYIMVKNGF"
     gene            complement(9917..10552)
                     /locus_tag="ACJE1S_001509"
     CDS             complement(9917..10552)
                     /locus_tag="ACJE1S_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004288266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HGG0807043.1"
                     /translation="MDHHKLIPLWDERYNINHQKIDTQHQRLFEPAAQVENAVFKFVK
                     RDELKEILTELFAYMKEHFHDEEEFMQEIQYPRLYEHKQIHKNIIHEMFQLIQNIKST
                     NDLKEKLYSIMSKWLSRHILSHDVMIIAWVNENLKKDENKALELNDLPPKQTLTQEEN
                     FEFIYSCPCKIDHRLSFKEHESITNEGKVMRCKKCQELLFFIRSQEKTYKG"
BASE COUNT         3400 a         1600 c         1674 g         3899 t
ORIGIN      
        1 actttcacaa gcctttggct taaaaattta ggttataatt ttttaaatac tttaactctt
       61 aaggaaaagc atgcaagaaa atcataattt tatttctttt gttcttcttg atgaagccaa
      121 gtttgatttt ttgaaattga aaaagatact tgaagatgat tttgatatat ggattgctga
      181 tgaaaatttt actcaagatg gagtaatttt ttcttttaaa aatatgatcg ttactttaaa
      241 tttgattaaa aatcctatac ccaacaacga agcagaatat tatgctaatt ttaattttat
      301 gtggaaagat gctttagagc aaacccaaaa acataaagca catcttcttg tatccgtttt
      361 aagtcagagt gaatcaaagc tagatcaagc taaacttttt actcaaatat catctgcgtg
      421 tttgcaagat gagcatactt tgggatttta tacaggagga gttgttttag agcctaagtt
      481 ttatatagaa aatgcaaaaa tgctagaaga taatcgtttg cctatttata attggattta
      541 tgtaagcgtt tatccaggtg ataatggcaa taatgcctac acctatggtc ttagaaattt
      601 cgataaatta gagcttgagg tttgtgatgc aaatatagaa gaaaaagagc ttttcttcac
      661 tttgtatgac attattttgc atattttaac ttatgatcta agtttaaaag atgatgatac
      721 tttaaaattt gaagatggta gaatactttc ttttaagaaa agtcaaggca taggtgttga
      781 aaatgagagt ttaaaaatta ttttttagtt tcacattcac ttcacaaaga taagttaaac
      841 ttctctcaac caaaacacaa acaaaaagga gaaaaaatga aattaaaatt aggtttagcg
      901 gctttattgg gtgctacggt gctttttgct agagatataa ttgttcctgc gagtgaactt
      961 ccaagaaatg cacaagattt tatatctaag aattttaaaa ctgcacaaat tgctttagta
     1021 aaaaaagata tagattctta tgatgtgact ttaaatgatg gaacagaaat tgactttatt
     1081 atcactggag agtggaaaga tgtagatgga aaatacaaag ctctgccaaa tagcattttg
     1141 ccaaatatta tgccaaaaat cagtgcttca tcaaacgctc aaatcataga agtaagcaga
     1201 gaaatcaacg gatataaatt tgaattaagc aatcaattaa aaatttatac tgatgcacag
     1261 ggtaatatct taggacaaaa atttgattat taattctaaa agcatgtaaa tttggagact
     1321 ttatgtttcc aaatttttaa atgagtttaa aaatttctct ttgttaatcc aagatggttt
     1381 tttatataaa aaaccatctt caaaacttac ttaaattaaa tcttaaaata taattttaat
     1441 aagactaata ttttacaaaa tgttacataa attaaagaaa aatgctagaa atttagattt
     1501 tttacccagt aagtgtgtta aaataagctt aattttgcga tatcaaattt ttaaggaaaa
     1561 tgtatgaata ctcctaagtg gactcgttat gacacgagat gggttttatc tctttttgga
     1621 accgctgtgg gtgcggggat tttattttta cctattaagg cgggtgttgg tggtttttgg
     1681 ccagttgttg tgatgacttt gattattttt ccaatggtgt atttaagcca tagagcctta
     1741 agtcgttttg tatgtcaagc aaatggtaat gataaagaca ttacccatgc ggctgaagag
     1801 tattttggta gaaaagtaag tatttttatt tctgtgcttt atttctttgc aatttttcca
     1861 atttgtttag cgtattgtgt gggtataacc aatacttttg aaagttttat ctaccatcaa
     1921 tttttacccc ttttaaattc agagggtgta tttgcagata ttattcgtgc catgtatgag
     1981 gtaagcacag atgataaaga aaaagttgta gcgagtttat ttccttttta tcgtttgctt
     2041 ttagctttta ttttggtaag tatttttatg cttattatgc tttttagcga agagttaatc
     2101 actaaagtat gtgaatggct tgtgtatcct ttatgtgcta ttttattttt attttcttta
     2161 tatcttatcc cacaatggtc atttgaaagt tttagtgcta ttcctggaac aaaagaattt
     2221 attactatag tatggctaac tttaccggtt ttagtgtttt catttaatca ctcaccagca
     2281 atttcaactt tttctctaag cgtaaaaaga gaatatcctg aaaattcagt acaaaaagca
     2341 aatcaaattt tgtttagaac ctctgtcatg ttgcttgctt ttgttatgtt ttttgtgata
     2401 tcttgcgtgc tttctttaac tccagctgaa cttgctgaag caagagcaca aaacataccg
     2461 gtgctttctt attttgctaa taagcttgat aatccattta tttcttatgg tggtccatta
     2521 atcgcatttt tggcaatttc tagttcattc tttggacatt attttggcgc tagagaaggt
     2581 gcttatggta tagttagaaa atgctgcaaa ttagcaggta atgaaaatcc tgatttgaaa
     2641 aaaatcgcag tttattctac tttagtaatg tatattgtta tgttaattac tgcttatatc
     2701 aatcctagta ttttaggttt tattgaaagt ttgggcggtc caattatcgc agcaatctta
     2761 tttttaatgc caattattgc aatttatacg gtttcaaaaa tgaaaaaatt ccaaaataaa
     2821 gctttagatg cttttgtttt tattacaggt gttttaacaa tcatcactgt aatttatact
     2881 ttttaaggtg tggtgaatga gtaatttaaa tatttttaaa ataggtgtag gtccttcatc
     2941 atcacatact ttaggaccta tgcttgcagg aaatttattt tgtaaaaaaa ttgctaaaaa
     3001 attagaaaaa attgaaagaa ttcaaatcat tctttatggc tctttgtctt taacaggcaa
     3061 aggacacttg agtgataagg ctgtgatttg ggggttaaat ggcttagaag ctaaaaattt
     3121 aagtgcggca atacaagatg aagtaaataa aaatgctatt gaaaatgctc aaattgattt
     3181 ttgtggcgag aaaaaactta gttttaatta tgaaaaagat ttgatatttt ctaaagattt
     3241 tttaccttta catgagaatg gtatgaaaat taaagcttat gattgtaaag gtgggttagt
     3301 tgatgaggaa acttattatt ctgtaggtgg aggctttgtt ttaacaactg cacaattaga
     3361 aaaaaaaggt aaaaattcca accaaaataa aaagaaaaaa ctagatatag agcttaataa
     3421 cgctaaagaa gctttagagc tttgcgataa aagagattgg gatttggcag agctttctta
     3481 tcgttatgaa ttgcaatttc acactaaaga ggaaattcgt gcttattgtc ttgaaatttg
     3541 ggaagtgatg caagaagtgt attataatgg tacgcacccg aatgaagatt atttgcctgg
     3601 aaaacttcat ttaaagcgta gagctaaagg acttaaagaa agagtagcga tgactactga
     3661 tcctatgggg attattgatt ttatctcttt gtatgctatt gcgattgctg aagaaaatgc
     3721 tagcggagca aaagtcgtaa ccgcaccaac aaatggagca tgtgctgtta tccctgctgt
     3781 catgctttat cttaaaaacc ataccatagg ttttagtgat gaaaaggcaa ttgaattttt
     3841 attagtagct atgcttatag gttcttttta taagaaaaat gcaagtatta gtggagcaga
     3901 agcaggttgt caagcagaaa ttggtagtgc tagttctatg gcagctgcgg ctatggccac
     3961 agttttagga gccaatgctt ttaaggcttg caacgctgct gaaatggcaa tggagcatca
     4021 tctaggactt acttgtgatc ctgtaggggg cttggttcaa attccatgca ttgaaagaaa
     4081 tgcttttggg gcgataaaag ctatcagtgc agctagaatg gcaatgacac gcaaatctat
     4141 tcctatagtc agccttgatg aggtgataga aaccatgtat gaaactggta aggatatgaa
     4201 ttacaaatac aaagaaactt ctttaggcgg acttgctaca aatttaaaaa cagtgtgcta
     4261 agattttact ttgcacactt ttaaataaat aaatttttat aaaatttaag gtatttttgt
     4321 ttattttttt gcgtattttt tcattctttg ggttaaaaat tctttcattt cttctttgct
     4381 aaaacttttt aaaatgcgaa tttgtttaaa aagtaagcca aggttgatga tacccataac
     4441 caaaagcaac aaacaaatca tcaaaaaaac aagatcaaca gcaccaaatt cattgatggc
     4501 agccaagctt gcaaaaaata cactcgctaa aaataaaaaa attaaaagca agacttgttt
     4561 taattttgct tcagcaaaat tatcactatt ttgagtaaaa tttctaaaaa gtatgatttt
     4621 tttgcctaaa tttgaaatta aaatttcatc attttcttta aacaaatttt ctttcaaact
     4681 ttgataaaaa aagatttcat tgtttaaatt tagctcatct ttgaagcttg ctagcgtata
     4741 atctttataa aaaaaagatt tgatttcgct tttcttttct attttaaata atcttaaatc
     4801 atttcttgca taaaaaaatc cgctaaagct cataaatgcc ataagtgtca ctccctaaaa
     4861 aatttctata aagtggcttg aaattcaaag gcattgtaac atttttttca tcatttaaac
     4921 ttgaactttg aaaaatcaaa aacatatcca tctcatcttt gaattttttt aggaaatttt
     4981 ctccaccctc atacattaaa aatttagctt tattaggaat ttgagtataa atttgacgat
     5041 gaggcacgct aaataaagga atgcttttgt caaaattttc taaattttga tgacttaaaa
     5101 tacaaagatt aggcgccttg cctttacaaa gtcttgcatc aagtatggga cgatcttttc
     5161 ttatcgtttc tcctcctaac acaagcaaat caatcacaga acgaatttta tgcgcataag
     5221 tacgacttag ctcattgctt acgattttgc caaaaggcga gccattcata gaaagagcga
     5281 gtttgaaaag tttaaattgt cctttttgcc attttaaaaa aggttttaaa agtttttttc
     5341 cctcatcttt aagcacacca aattcaatct ctactccttg tttttttaaa aactccgcac
     5401 ctttacttgc aatctcattc tcatctttaa cgctgatgaa aattttttta aaacctagct
     5461 cgctaaagag ttttgcacaa ggaggcgttt ttccttgatg agagcaaggc tcaagtgtga
     5521 caaaagctat gctatcttta aaaatacctc tatggttttt gcaaataaat tcatgcatcg
     5581 cattggcttc ttgaggtaat gaaatttcag ggtttaaatt tgtaaaagca tgggctatag
     5641 catttaattc tgcatgagca catcctgctt tttcatgggc ttttatggct aaaatttttt
     5701 catttttgtc tagtataacg caacctacag caggattagg gtaggttaaa aactgatatt
     5761 tccaagcttc atttaatgct aaattcatat aaaaattttt catttcattc ctttatatta
     5821 tgctctttag caaaagctct tatcttagct ctaagctctt caggaaagtt agctctataa
     5881 atagcaggga ttctaggatc aagtttagaa tcaagtttgt gtttgttgta aataaattct
     5941 aatctttcag gactatagta tcttggtgca ttaggatagc cttgaggagg agttaaagct
     6001 gcgagtttgg catgtaaata aagctcttct aaataaattt ctacatctgc ttcactccag
     6061 tgattgggta aatcataact ataacttctt acagaacctt ctttataagc atctatttct
     6121 tggtcaaatt cccatctact ttcaggagta gaatccacat ctcttggatc tttatattta
     6181 cccttatcga ttccatttag cattgccgtc actactctat tattaatatc gtaaatgaaa
     6241 tcatattcat ttggatctat aatccattct gtagagatta actcatctaa aaaaggaagc
     6301 attccgtatt tgtcataagg aggattttta gcaaagtctt tcatgagttg tctttttaaa
     6361 gggttttcat gtattccata taaaggacga tacaatcctt ctaaacattt ttcatctcct
     6421 aattgcactc caagccaaag agcttgaaag gctcttgatt ttaaaccaga atcactaaga
     6481 tatacagctg cttcataaaa agccttttta ttgcccaata tacctaagca aagttgatat
     6541 tctcctgcaa ttaaatcaga atatatagta tttgccttag caccaaaagc tccataagct
     6601 ccatgttcaa aagcattttt ataaagctct tcactgctat ctttaagctg agcaaaataa
     6661 aatctatcat caaatactgt atcttctatt ttacgagaat aaacatataa accccaataa
     6721 gcatccccta agtcatactt ttctataagt tcttcataaa tccttatgct tctataatta
     6781 gcatttaaaa attcattgat tagtttatcc aacaaagctt cattgttttc atcttggtct
     6841 aatttaccta taatggctct aaaataatct tttgaatatc caagttctgc taaagcaagt
     6901 cctgctttat aatctttgcc ctcttcataa gcatagctta aattcttaat ggctttttga
     6961 aaaagatcat atcctttata atctagtctc ttagcttctt tataatcttt cataccttct
     7021 ttataagcat ttataaatct tttttcttta ggtcttttag gtcttattaa agcactatct
     7081 tttaaatcta tgggagtaca tactaagcca cttcttttta ctaaataatt ataccttcct
     7141 tctccatcta aagaattata ataagctttt tctgctttgg tccaaggagc taagcttcct
     7201 ttaacaggat cttttaaata gatcttttgc caatctttaa attcaagcaa agtggatttc
     7261 tctcctgtgt gaaactctgg atctaaatat ttaggctcat aaaatttttt ataaggggaa
     7321 ttatcgacta tattgacagc ttctaaaagg gctttggtgt attctttggt gtatttgcca
     7381 gtgggttttt ctcgttgatt aaataaaaat tcattggttt ttgtattgag ttttatacct
     7441 cctccattag gagtatagac cattttaata tctttattgg tatcttcatt gttattcata
     7501 tcctctcctt tgcaagcatt taagccaaag attattgata tgagcaaaat aattttaaac
     7561 atgccttttc cttaatgata tataattaag aaattgtagc ttttttatag tgaaaaaaac
     7621 ttaaaaattt tatatgatat taatttaagt caggaattaa aatttattgc atttgtgaac
     7681 tcttttttga ggtgttcctt cataacaaat ttcaaccttg cctttaactc ctcttgtttt
     7741 tctgatgagt tttgccatag ttttggcata ttttttatag ttttgattgt taagatattt
     7801 ttgagttgag aaatttaaac ccatgccttt tgcccatgct tcaaattcta tcttttctac
     7861 tttgttttta aaatgttctt tgataacttt tacttcgggt tggattttat cacttggcag
     7921 ttcatttgcc tcggcaaata taaaaaaaga tgaaagtata gatgagatta agatgaattt
     7981 tttcataaat tgatttcctt attttttaga tcaaatcaat ttatcataac agagtttgtt
     8041 aaactaatga aaatttcaaa gtggccggga gaaagggatt cgaacccctg gaggtgtgac
     8101 cctcaacggt tttcaagacc gccgctttcg accactcagc catctcccga attgaagttg
     8161 taaaaattaa ttgccttttt tggaggcgac atccggattc gaaccggaga tcaaggcttt
     8221 gcaggcccat gccttaccgc ttggctatgt cgccctgatg atttttagaa aaagtggtgc
     8281 ccgaggccgg acttgaaccg gcacggaaga aaaattccga gggattttaa gtcccttgtg
     8341 tctaccaatt ccaccacccg ggcgggtgat aatggagcgg gaaacgagat tcgaactcgc
     8401 gaccccaacc ttggcaaggt tgtgctctac ccctgagcta ttcccgcgta aagctaaaga
     8461 tgaaattcta gcaaaataaa cttaaaatga gtttattttg ctttgattat ttgcaaataa
     8521 ataaagcagt gccactaatg ctttgctctt catcttttat tataggtaag gaaagctcca
     8581 tattatcagc gcttttcata ctatttaaag cccttggata aaaatttgga attgattcaa
     8641 tatttagatt ttttaatata caagttttgt taagatctaa agaataaatt ttttcataag
     8701 aataagcttt ttttagaagt tcgctataaa gtttttcttt attgtctttt agggtttgtt
     8761 tggagaattt aggctctaag gcaggtgtag aaatacctat aaattcactt tttgcaatga
     8821 tggagtttaa atcatttaaa agtttgttaa aattttctag tttatctgct gtaaactcac
     8881 attctaaatt tgcatgaagt ctttgtcctt taggggtttg aactccatct ttataagaaa
     8941 aattaggttc aagtgaaaaa cttccgccac tgcaaaaatt ttctttttta gagcgttcta
     9001 aaatttgatt aaaagtgtta gaaatttgaa ttttatcttc attgcttaaa aaggtttgag
     9061 tgcttaaatt ttcatttgcc caaaagttga tatttgcatg aaaaatatcg ggtttagctt
     9121 ccatacttgt ttctatactt cttgagaaat ttaaagtttg agtagttttg tttttattta
     9181 aaaactctac attaaaaatc actccagcta caaaaagtac caaacataaa aatcctatcc
     9241 ctaaaccttt aaaaaatgct aacatttctt catcctttaa taaaaattaa ataattttaa
     9301 caaaataaat ataaaaatta ataccctttt ttgaaaaatt ctaaaggaaa tttacatttt
     9361 ttacatttaa attttgcacc ttcattttgt atttttttat gaattccaga aggtacatca
     9421 tgaatttgcc ctatgcactc gcaagcgtaa aaataaatta cagcctcatc ttcatcatct
     9481 ttaatttctt caaaagtgat atcagctcca ttttcagagc ttaaagaacc taatctccat
     9541 tgttctactc tcatatcttc ataaagtatg tgttctaaaa gccatttttt accatgatat
     9601 aaagtttttc ttttaggtcg ttggtggttt ttatgttttg aatgattttt atcatggatt
     9661 ggatgatttc tttatgaatt tggcgatgcc tttcaaagtc tggataacga atgaattgca
     9721 tatatttttc ttcatcatca aaatggtatt tcatatagtt gaaaaaatct gtaagcaaag
     9781 ctttaatttc atctctatga acgggtttat caaatatatg ttcaactttg gctgcaagtt
     9841 caaacagctt tttgtgttgg ttgtctattc tgccattatg aacgctatag attttatccc
     9901 attttggaag caagctttat cccttataag ttttttcttg gcttctaata aaaaataaaa
     9961 gctcttgaca ttttttacat ctcataacct tgccttcatt ggtaatactt tcatgctctt
    10021 taaagcttaa cctatgatct atcttgcaag gacaagaata gataaattcg aaattttcct
    10081 cctgtgttag ggtttgtttt ggtggcaaat cgtttaactc aagtgcttta ttttcatctt
    10141 tttttaaatt ctcatttacc caagcaataa tcataacatc atggcttaaa atatgcctag
    10201 aaagccattt tgacatgata gagtatagtt tttcttttaa atcatttgta gattttatat
    10261 tttgtatcaa ttgaaacatt tcatgtatga tatttttatg tatttgtttg tgctcgtaaa
    10321 ggcgtggata ttgaatttct tgcataaatt cttcctcatc atgaaaatgt tctttcatat
    10381 aagcaaagag ttcggttaaa atttctttta attcatcgcg cttaacaaat ttaaaaaccg
    10441 cattttcaac ttgtgctgca ggttcgaaga gtctttggtg ttgggtatcg attttttgat
    10501 ggttgatatt atagcgttca tcccaaaggg gaattagctt atgatgatcc attgatttaa
    10561 ccctttaaat gcg
//
LOCUS       DBBXOW010000063        10571 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.064, whole genome shotgun sequence.
ACCESSION   DBBXOW010000063 DBBXOW010000000
VERSION     DBBXOW010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10571
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.064"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            12..437
                     /gene="exbB"
                     /locus_tag="ACJE1S_001510"
     CDS             12..437
                     /gene="exbB"
                     /locus_tag="ACJE1S_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HGG0807044.1"
                     /translation="MEFLKDYIDLIIFIILGVMAFIAFWCVIERVLFFRKIDFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVVGIMITFYEMGIAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKVSKNA"
     gene            430..819
                     /gene="exbD"
                     /locus_tag="ACJE1S_001511"
     CDS             430..819
                     /gene="exbD"
                     /locus_tag="ACJE1S_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HGG0807045.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIILSISTFIAHGKIEINLPV
                     SENALSLNNDEKKLSISIDENNIFYLDDKTTDLKGLSDAISSLHKKTIVELKSDKNAK
                     FESFVQIIDLLKAKEHENFQIITEKNR"
     gene            complement(1043..1927)
                     /locus_tag="ACJE1S_001512"
     CDS             complement(1043..1927)
                     /locus_tag="ACJE1S_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807046.1"
                     /translation="MDKLTINDFNVSLPSSQNVTNRKEILELKKEEKDKIPVQDLSSL
                     NSDGVKVVFENKQGELIALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANEFIA
                     NWFENIEDNFNSLSSNLSSNTQDKNIKLNFHTNTITQSMQNLGFKTSDEKISDDANIE
                     EKLNFFIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDD
                     KENNIKEKEDEDLLEIAKEKGLSALSADEQAKLKASNPQIFEELQNKSLGNLEQNLKK
                     DLMVQISNNEAIFVNKRV"
     gene            complement(1981..2178)
                     /locus_tag="ACJE1S_001513"
     CDS             complement(1981..2178)
                     /locus_tag="ACJE1S_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807047.1"
                     /translation="MRKLLSVALVACFIGSFAYGKTENNKSPQVRSSCVDYEIRLKRC
                     NSLPTQYQRQMCRLGLFAACK"
     gene            2299..3282
                     /locus_tag="ACJE1S_001514"
     CDS             2299..3282
                     /locus_tag="ACJE1S_001514"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase"
                     /protein_id="HGG0807048.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELAAKFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENELLRNLKTPKYEVIELGDLIGAYSLLSAN
                     ADEKDLELALKIALTYTKHEANKSYELRFKDKSYKSIAFEDKKEINPFFIS"
     gene            complement(3285..4627)
                     /locus_tag="ACJE1S_001515"
                     /pseudo
     CDS             complement(3285..4627)
                     /locus_tag="ACJE1S_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781941.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(4648..4934)
                     /locus_tag="ACJE1S_001516"
                     /pseudo
     CDS             complement(4648..4934)
                     /locus_tag="ACJE1S_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781942.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4935..7885)
                     /locus_tag="ACJE1S_001517"
                     /pseudo
     CDS             complement(4935..7885)
                     /locus_tag="ACJE1S_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002837660.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
     gene            complement(7849..8439)
                     /locus_tag="ACJE1S_001518"
     CDS             complement(7849..8439)
                     /locus_tag="ACJE1S_001518"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807049.1"
                     /translation="MKYFSTTQAKNHQRESAWNALKDAAAKNSALNQCFSLLFGSDYA
                     SKRFVPDQKEWNLDAKIVFKAKSEAVIASKGKLDLNAKEYNQDLVSSLDKNFALLDSD
                     LKKATNSQDLILNSIPDLINSGLFTLENKTNDNITYEYTTNTSIIDESKYFGFLSILN
                     QFKNKNFNEFIVIGDPFLKISLLTQCMQTHYNPILN"
     gene            complement(8586..8840)
                     /locus_tag="ACJE1S_001519"
     CDS             complement(8586..8840)
                     /locus_tag="ACJE1S_001519"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807050.1"
                     /translation="MLETSTEYSQGFGQVGYGDTAFKRWNMEVGVTGIVKYNNLLDSK
                     QASIQAGKDININTQSQDNARQINNSGKILLKAISYLLEI"
     gene            complement(8864..10003)
                     /locus_tag="ACJE1S_001520"
     CDS             complement(8864..10003)
                     /locus_tag="ACJE1S_001520"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807051.1"
                     /translation="MVDGDYFNVISRGIDLAGSIAHYQSGKNLSDINFIAGLNKVDLS
                     TPNAPKIIASKQKDEKNDYGIDGKYLGSMYANTVTLISTEEGVGVRHSGVIRGIEDVI
                     VKVKDKAEFQAIGVNTNGSVKIDAKDIKTSLINADTIDLKASGKVTNEGLYKGKQIQI
                     NANNFENAKQTNLSQETKDIFKINQENSSIFADSLTLNTLDKTSNFGFINALNDIKVG
                     TNSFDNQGEISANKDISLMLNDDAFINNGKILSQNDIQIQANKDLTLNHGNLYAQNLL
                     HIKSLNDLNINSKLENTSSIELDAKNIYVKNLVASGKELNLHADENLVNDAYLFSNGD
                     LRAQATTLTNNSTFNSLNNLYLNAHTIHNNALIFADKVSISRQIF"
     gene            complement(10003..10551)
                     /locus_tag="ACJE1S_001521"
     CDS             complement(10003..10551)
                     /locus_tag="ACJE1S_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HGG0807052.1"
                     /translation="MEFSKKKIVRLSLNLTLLGALFPCVLFSADLRQRNGNVIVSRTT
                     DLTQSSNKTDVINIKNPNQNGVSHNQFDEFSVQDGVIFNNSLKDGNSQIGGWVGKNPN
                     LKQNANTIINEISSKQASNINGAVEVFGKSANLIFANENGFSVNGAAFLNTKGVTLST
                     GKFNGDFTEVTSNGRVAIEEKG"
BASE COUNT         3454 a         1756 c         1424 g         3937 t
ORIGIN      
        1 tggagttaaa tatggaattt ttaaaagatt atattgattt aattatcttt ataattttag
       61 gagttatggc atttatagct ttttggtgcg taattgaaag agtattattt tttagaaaaa
      121 tagattttaa aaattatgaa aatcaagagc aatttgatga tgcaattagc gagaatttaa
      181 ctaccattta tattatttat tctaacgctc cctacatagg actcttagga actgttgtag
      241 ggattatgat tactttttat gaaatgggaa tagcgggaaa tatcgatgtc aaatccatag
      301 tcgtaggact ttctttagct cttaaagcta cagctttagg acttttagtc gccatacctg
      361 ccttaatggc ttataatgcc ttacttcgca aggtttcact tttaagtaat gcttataagg
      421 tgagtaaaaa tgcttaaatt gcctaaaaat gaagggttaa atatagttcc tttcatagat
      481 ataatgcttg ttttacttgc tatcattctt agtatttcaa ctttcattgc tcatggcaaa
      541 attgaaatca atctacccgt tagcgaaaat gctctaagtc ttaacaatga tgaaaaaaaa
      601 ttatccatta gcattgatga aaacaatatt ttctatctag acgataagac tacagattta
      661 aaaggcttaa gcgatgctat ttcttcgctt cataaaaaaa ctatagtaga attaaaaagt
      721 gataagaatg caaaatttga aagctttgtt caaatcattg acttattaaa agctaaagag
      781 catgagaatt tccaaattat aacagagaaa aatagatgaa aaatactttg tcaaatcaca
      841 aatcacaagc tttttatata tcttttttct tagctcttct gctaattttt gaaaaataga
      901 attaaatagc tttgctttga ctctaaaaca atctataact taaactaatc acaaaagcta
      961 aaaaacctga tacaaaacta ataagagcgc ttaatctaca cccaaagtaa atactataaa
     1021 tatttcattt atttttaaat ttttacactc ttttgttcac aaatatggct tcattattac
     1081 ttatttgcac cattaaatct ttttttaaat tttgctctaa attccctaaa gacttatttt
     1141 gaagttcttc aaaaatttgt ggattacttg ctttaagttt ggcttgctca tctgcactca
     1201 aagcacttag tcctttttct ttggcaattt caagcaaatc ttcgtcttct ttttctttga
     1261 tattattttc cttatcatct tttttattga ttttttgcgg atctatggtt ttcatagcat
     1321 tagctccacc acctgatgct tctttaatgt cgcttaaaat ttctctcatg ctaggttctt
     1381 taacatcact atcatcaact ttaccatctt tatttacatc tttatcaata aaaaaattta
     1441 atttttcttc tatatttgca tcatcagata ttttttcatc gcttgtttta aagcctaaat
     1501 tttgcatact ttgagtgatt gtatttgtat gaaaatttaa ttttatattt ttatcttgag
     1561 tattagagct taaatttgaa cttaaagaat taaaattatc ttctatattt tcaaaccaat
     1621 tagcaataaa ttcatttgct tcgccattaa gccttatact accatcattt ctagcaacat
     1681 aattcgtata agaaccgaaa tttttttgta aactactata attttcatcg cttaaattta
     1741 aagctataag ttcaccttgc ttattttcaa aaacaacctt aacaccatcg ctatttaaac
     1801 tcgaaagatc ttgcacggga attttatctt tctcttcttt ttttaattct aaaatttctt
     1861 tacgatttgt aacattttga gaacttggta aagaaacatt aaaatcattg attgttaatt
     1921 tatccataat aactccttag aaattttaaa gcccaagcat ttaacttgga cttgtttatt
     1981 ttatttacaa gctgcaaata agcccaaacg acacatttgt ctttgatatt gagtaggcaa
     2041 agaattgcat cgtttcaatc ttatttcata atcaacgcaa gaacttctaa cttgtgggct
     2101 tttattattc tcagttttgc cataagcaaa agaaccaata aagcaagcaa ctagtgcaac
     2161 agagagtaat tttctcatag taaacctcca aaaataattg taatcttaaa attatttgat
     2221 acaattacaa atttcatatc ggcaaaaaaa tcaaatttat ttatactaac aaaattattt
     2281 tttaaaaaag gaacataaat gaaagcatta gctcttttta gcggtgggct tgatagtatg
     2341 cttgcaatga aactcatcac tgcacaaggc atagaagtta aagctctaaa tatcaacata
     2401 ggttttggaa gcacaagtga taaaagcgaa atcatgaaaa agcgtgcggc aatggtaggt
     2461 gcagattttg aaatgataga tgtaagaaat tcctatcttc aagaagtgct ttttaatcca
     2521 caatatggct atggcaaaca ttttaatcct tgtatagatt gtcatgcttt tatgtttaaa
     2581 actgctcttg ctatgttaaa agaagaaaat gcaagtttta tcatcacagg agaagtttta
     2641 ggacaacgcc ctatgagtca aagaagtgat gcgatggcaa aggttaaaaa acttgctctt
     2701 gatgaagaag atttaatctt gcgtcctatg tgcgcaaaaa atttgccttt aaccaagcct
     2761 gaaagagaag gttgggtgga tagagaaaag cttgaaggca ttagcggaag aagtcgtaaa
     2821 agacaacttg aacttgcagc taaatttggc ttagaagact ttgaaagccc aggtggaggt
     2881 tgtttgctaa ctcttgatag ttttgctaaa aaaattcgag attttataga atttgacaaa
     2941 gatatgcaag taaatgatgc gcaactttta aaatatggtc gtcatttaag actgcctaat
     3001 ggagctaaaa tgatcatagg tagaaatgaa ttagaaaatg agctgctaag aaatttaaaa
     3061 acacccaaat atgaagtgat agaacttggg gatttaatcg gtgcttattc tttacttagt
     3121 gcaaatgcag atgaaaaaga tttagaactc gccttaaaaa tcgctctaac ttacaccaag
     3181 catgaagcaa acaaaagcta tgaacttcga tttaaagata aaagctataa aagtatagct
     3241 tttgaggata aaaaagaaat caatccattt ttcatttctt aaacttaaaa aaatacagaa
     3301 gccctgagat aaataggaat cgtttcgctt ggcatattcg aagatttatg cagggcttta
     3361 gaagctgtta aatttaaaga aagatgattt aagttgtatc taaaaccaaa ggcgacaccg
     3421 gctaaaaatc tttattgggt aaaagataat ccctaccata acccatatcc aatccaacaa
     3481 aaggctctaa tgctcttaaa tatttaggcg catttagaaa ttgcaaataa atcgtattgt
     3541 tactatatgc tccataatca agagcagcag agctttcttt aaatccccta actgtgtatt
     3601 catcaccgat taaaaattta tcagcataca ataagggttc attagaataa ctcacaccca
     3661 agctgttttg atataaaaat gctaggccat catttgcata aaaacttttt tgatagctta
     3721 aattaaaatt gactttgtta aattcgattt tatataaaga atctttagaa tcttttttag
     3781 aacccaaaaa tggaattcct ttttcgtatt ctaaatttaa aaacaaaaat ccaccaaatg
     3841 ccagcgttga atactcaacc ccgctagcaa tacttgaata cctaccactt gaactctcta
     3901 aacgaaaatt atcaatctca ttaacatcat ctttaatgcc taaattagca taaattgaaa
     3961 atttatcctt gcttgtgcaa tgtaaaatct tttttaacat gattttatgt cttaagcttg
     4021 tatctgtatt ttttataaaa gaattatcat atccctcaat catatttata ttatcactat
     4081 attgcacaga ataagacaat tgataactct gtatgggcaa ggtataattt gccacataaa
     4141 cattttctcg ctcttgactc atatctttta acaatccttt gataaaacca aagcgtatgg
     4201 agtcgttaag atttaaaata ttacttaaag aaagataggc actagcttta tattctcctt
     4261 tagctttata gccactatta tcaaagtcca atatcaaatc aggtggcttt gatttaagat
     4321 tgataaatat atcagaataa ccataatttt cactcgcttt aacagcgatt ttaacatctc
     4381 ttgcgccatt gtttaaattt tctatacctg tatctaaatc ataaatattg aatttatcac
     4441 cctttttcaa aggcatacca aaatctaatc ttgttgtatt attatcccca ttaagataca
     4501 cctctcctac aaaaccatat tttaaatcaa gaaaaagtat atcgcgttct tgatcaagct
     4561 catcaatggt tacactagaa gttgaatagc ccttcgcaac gataaaattt gtaagctctt
     4621 taatcatatt ataaatatca ttaacactta aaggctgatt aatgtatttt ttaaaatatt
     4681 atttgcttgc atggtaagcg tatcgttttt cttaaattga atttgtttga aaatataaat
     4741 tttatcttca gaatcttgat tttctaaata cacatccttt tcttgctgtt gctttttttc
     4801 taattcatca aatttttttg tatatgtaat tgttgttgtc ttttatctag taaattcagc
     4861 gtttttgcag agtcatctgc ttgcaataag cagataaaac tcataagcaa aaaaataatt
     4921 tttaaaaatt tcacctataa ccttgtagtt tgtgtgcttt cattgatata aggtccatct
     4981 gatttagaag gttggtttga tggttgatta gaagtagaat cagatccagt aaccttgctt
     5041 atcccatttt ttattttaga gattgaagaa ttaagattta tagtacctcc tgcccaagaa
     5101 tgatcttgtg tatctgtggt attttgagta tctgtactta taccatgatt tttgttattg
     5161 tttatattga tattggctgc agaatttaca ctgcctgtct tgtcaatatg atcatctata
     5221 tgaaccactc ctccaaagct ttgatttgtc tcgccactta atcttatcat agccacatcg
     5281 cttttttcat agacacttac ttcagaattt gtaacttttc catcaacaag taaatttcct
     5341 ttttgattat cagaatttaa aattccccct tgcaaattta aatttccatt aacatggcca
     5401 ttgatttcat ttcctgcact gataccactt tgagttgtaa cagttgtttt atctgtttta
     5461 gcatatccta tacctaaagt gcctgaaaca cttcctgtaa caagatgatt gcttgataag
     5521 cctccagttc ctgatgcatt caataaagcg ctatattttt gagaattaag actatcagct
     5581 aaagaattta cttccaaatt tccgacattt aaaatagcat cattagaagc tttaacattg
     5641 gctccattga gtgtaaaatc tttacctgtg ttgatattga tattattagc atttaaattc
     5701 gcattggtaa attgcgtttc gtttgattta gaatacgacg cacttgcaaa accttcaatg
     5761 ccttcaccca cagttccacc atcaactgca tgatatcctg cggtttgctt gttagttgct
     5821 gcaatttcca aagaagagct agaagaagaa tttttagatt ttgcagcatt taaaataaca
     5881 ttatcttttg cctcgatatt aatgctacta gccttagctt ccactccatt taaaacaata
     5941 cttccttttg tgctttctaa atttaaatta tcgcctgcat tgattttaga aatattctcg
     6001 ctagaacttt ggcttttatc ttgattgaat ttaaaaccta gagtttgatt agaagtggta
     6061 tttatgagat tgttgctaaa tatattagca gtattggcta aagcttgaga agctactatt
     6121 ccataattta cgcctaaatt ttcattctta gcagctgcat tttgagccga ttgattgata
     6181 gcagaagcga taggactagt agcttcaatt ctttctttaa tatacaaacc aaagcctgta
     6241 ctgctttgtg ttttaatatc ttcatattta gtactaacaa tctctcctgc tcttaaatta
     6301 atatccttat tagcctcaaa attagctcca cctatatcta aagcattatt tgcattgata
     6361 ttaatatttg aacctttgat agtatttgaa acatgggaaa gctcatcact tattttttcc
     6421 gttttagaaa attccaaacc agcctctgca gttcctaaaa gatcagatct taccccacct
     6481 tgtgtgatac tattagaact atttgtggta ttagcatttg ctttatcttg cacaaaacta
     6541 taatttacag caaccccatt tccggttaat tccaaattag cattagcaaa aaccccaata
     6601 gcaatcgaat cgctttctgt atgggtttta ttttacgcag ctataaaatc aaccttatca
     6661 gccttaatat caatctcgcc tccattaagc tcacttcctt taatgcttac atttttttga
     6721 gcatttaaat ttaaaatatc ggattgaatt tgtgatgaag acaccaaaga agcatcagta
     6781 tttacagaac tttgcttata ttcagcaata gaacttgttg aagaatgaga agaacttgaa
     6841 attttatttt ctccattttc tattgtaata ttttctccat ttaaattagc agatttatcc
     6901 gcttgtaaag ttgagcctgt gattgttata ttgccgttgg tattaatatt aatatcatct
     6961 tttgaattta aagtactgct tattgatttt gaagtttcta aattagcact ttcataactg
     7021 atctctacgg gttttaatac acaccatcgg ttttagtctt gctaagttcg tgtgcatctt
     7081 taatattaac attgttagca ttgatatcta ttttagaatc agcattgata ttgctagcta
     7141 taatatttac atcttgattg gaaacaattc ctacatttgc tcctttgata ttggtgctta
     7201 aaaccccatc tatactcgtt gtagtattgg atttttgact atctgtatta atttgctcaa
     7261 atgaagatga tttagaataa tcgtttttga tatttacatc acccttttga gatataagaa
     7321 caattttaga atcattcgca ctagtagaaa tatcactatt tttgatattt aaatcattta
     7381 ccgaatcaat attaacaaca ttatttgctt taatctctcc ttttttaatt gaattataag
     7441 agcctttttc atctatacct aaaacagtgt ctatattgac attattggca cttaaattta
     7501 tattttgcgc atttaaatta gaactttgca aattaatctc gttgccagca ttgatattaa
     7561 tctgaccctc tgaagctatg tcgcctaaca aagaattaaa tgattgcgta ttaatatcta
     7621 cgcctgtttt tcctgtaaga tttgatttta tttcattatt tccaattgtc tctttagaaa
     7681 gatacaacat aggagccatg atatttttac cgttttgttt gattgttaca tataaaatca
     7741 tatcttgatc aacagcttga tttttagcca aaccttgacc caaatttaag ccattttcat
     7801 tggcatattt tgctccattt tcaagtaatt ttttgatttc ttcttcgctc aatttagtat
     7861 tggattgtag tgcgtttgca tacattgcgt taataagctg attttcaaaa aaggatctcc
     7921 tataactata aattcgttga agtttttatt tttaaattga tttaaaatac ttaaaaatcc
     7981 aaaatacttg ctttcatcta tgatagaagt atttgtagtg tattcataag taatattatc
     8041 atttgtttta ttttcaagag taaataagcc tgaattgata agatcaggta tagaatttaa
     8101 aattaaatct tgactatttg tcgctttttt taaatccgaa tcaagtaagg caaaattttt
     8161 atccaaagaa ctgactaaat cttgattgta ttccttagca ttaagatcta atttaccctt
     8221 tgaagcaata acagcctcgg attttgcttt aaaaacaatc tttgcatcaa gattccactc
     8281 tttttgatca ggaacaaatc tttttgaagc ataatcacta ccaaataata aagaaaaaca
     8341 ttggtttaaa gctgaatttt tagctgctgc atctttaagc gcattccacg ctgattctct
     8401 ttgatgattt tttgcttggg tggtagaaaa atatttcaaa gcatcaagca agctttcatg
     8461 atctacaaaa taataagttg aatttgtatt ccaagaacca agatattctt tagcaaaaaa
     8521 tccattaact ctaatttgct ctaaaatttc acctacagaa atttctttac ttaaagactt
     8581 attgtctata tttccaaaag atacgatatt gccttgagca agatttttcc gctgttgttg
     8641 atttgtctag cattatcttg tgattgggta ttgatattta tatctttacc tgcttggata
     8701 gaagcttgct tgctgtctaa taaattatta tattttacaa tacccgtaac acctacttcc
     8761 atattccatc gtttaaaagc agtatcaccg taccctactt gaccaaaacc ttgagaatac
     8821 tcggtcgaag tctcaagcat gcctgttaaa tttgcattat tatttaaaat atttgcctcg
     8881 atattgatac tttatctgca aaaattaaag cattattatg aatcgtatgg gcgtttaaat
     8941 acaaattatt taagctatta aaagtggaat tatttgtaag ggttgtagct tgggctctaa
     9001 gatcaccatt tgaaaataaa taagcatcat ttacaagatt ttcatctgca tgaagattta
     9061 attcttttcc actagcaaca aggtttttaa cataaatatt tttcgcatca agctctattg
     9121 aagaagtatt ttcgagtttt gaattgatat ttaaatcatt caagcttttt atatgaagca
     9181 aattttgtgc gtataaattt ccatgattta aagttaaatc tttattagct tgtatttgaa
     9241 tatcattttg gcttaaaatt ttgccattat taataaaagc atcatcatta agcattaagc
     9301 ttatatcttt atttgctgaa atttctcctt gattgtcaaa agaatttgta cccactttaa
     9361 tatcatttaa agcattgata aatccaaaat tgctagtttt atctagggta tttaaagtta
     9421 aactgtctgc aaaaatactt gaattttctt gatttatctt aaaaatatct tttgtttctt
     9481 ggctcaaatt tgtttgcttt gcattttcaa aattattggc attgatttga atttgcttgc
     9541 ctttataaag tccttcattt gtaacttttc cacttgcttt taaatcaatt gtatctgcat
     9601 tgattaaaga ggttttaata tctttagcgt ctatcttaac acttccattt gtatttacac
     9661 ctatagcttg aaattcagcc ttatctttta cttttactat aacatcttca attccgcgta
     9721 ttactccgct atgtcttaca ccaacaccct cttctgtgct aataagagta actgtatttg
     9781 catacataga tcctaaatat ttcccatcaa taccataatc atttttttca tctttttgtt
     9841 ttgaagcaat aatttttgga gcatttggag tacttaaatc gaccttatta agcccagcta
     9901 taaaattaat atcggataaa tttttaccac tttgatagtg ggcaatacta cctgcaaggt
     9961 caatcccacg gctgattaca ttaaaataat ccccatcaac cattacccct tttcttcaat
    10021 ggctacccta ccattgcttg ttacttctgt aaaatctcca ttgaatttgc ctgtgctaag
    10081 tgtaactcct ttagtattta aaaaagccgc tccatttaca ctaaaaccat tttcattagc
    10141 aaaaattaaa ttagcacttt ttccaaatac ctcaacagcg ccattgatat tagaagcttg
    10201 cttacttgaa atttcattta taatagtatt ggcattttgt tttaaatttg gatttttccc
    10261 tacccatcct ccaatttgag aatttccatc ttttaaacta ttattaaaaa ttactccatc
    10321 ttggacactg aattcatcaa attgattgtg tgatactcca ttttgatttg ggtttttgat
    10381 attaattaca tcagttttat tgcttgattg cgtaagatct gttgttcttg aaacaataac
    10441 attaccattt ctttgacgca agtctgctga gaacaatacg caaggaaata aagcaccaag
    10501 gagtgttaaa ttcaacgata aacgaacaat tttcttttta ctaaattcca tcaatccctc
    10561 cttgtaatat c
//
LOCUS       DBBXOW010000064        10118 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.065, whole genome shotgun sequence.
ACCESSION   DBBXOW010000064 DBBXOW010000000
VERSION     DBBXOW010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10118
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.065"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1528)
                     /gene="recJ"
                     /locus_tag="ACJE1S_001522"
     CDS             complement(<1..1528)
                     /gene="recJ"
                     /locus_tag="ACJE1S_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HGG0807053.1"
                     /translation="MKTIDKNEIRKILASRFEKDLHTKLCDLPLPCCLKDIYKAANRI
                     KEAIDKNEKIAIVGDYDVDGIISCVIMAEFFDDIGFDYTVRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAAFEAAKLCKEKNIDLIITDHHMPQDTLPDAFAIINPKQKDCDF
                     PDIEICGAQVAWYLIAALKEVCKLKYDMGKFLELLAIAIVADMMELRDLNRALVRRGI
                     ECINKSKRVAFKAIKQYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDLD
                     KASAYLEQIISFNESRKDEEKQLFEDSLSQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNDQRLKGSARSVGKIDILALISKANFILSNYGGHKGAAGLSLDLDS
                     FEKFKTIIKKECMEISQSEFLDTDEILGILDPNEIDFEMLEILESFEPFGHKNPRPFF
                     ILENLYVKNKKFLGKDEKHLKLILTKDNKTIEALFFNFDKEPQLYENISLLGSISKNE
                     F"
     gene            complement(1515..3149)
                     /locus_tag="ACJE1S_001523"
     CDS             complement(1515..3149)
                     /locus_tag="ACJE1S_001523"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HGG0807054.1"
                     /translation="MNKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKAD
                     PYINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVI
                     EKERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIR
                     ALRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKAL
                     DRDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILNPIASILDLKNLKPNME
                     NWDILVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTRVELQWVDSEK
                     LENLESAEAFKNVSGILVAGGFGYRGVEGKIKAINYARENKIPFLGICLGMQLALVEF
                     ARHVLKIEDANSSEFDDKCSNPIVYLIDEFMDASGKKQIRTAKTPLGGTMRLGSYECK
                     VKPNSLLAKVYNNAKNIKERHRHRYEANPKYRKEFEDKGLIVSGESEGLIEAVELNNH
                     PFFLAVQFHPEFTSRLERVNPVICGFIKAAISYEDD"
     gene            3262..3885
                     /gene="thyX"
                     /locus_tag="ACJE1S_001524"
     CDS             3262..3885
                     /gene="thyX"
                     /locus_tag="ACJE1S_001524"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HGG0807055.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFDKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQEISRACLQEVARHRHTSPSVKSTRYTLKELRNEGEFKIGD
                     FENASRYLVLCGNEEVDNASIQALENLRLILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQDHQFIFEHCLHKDIH"
     gene            4003..5388
                     /locus_tag="ACJE1S_001525"
     CDS             4003..5388
                     /locus_tag="ACJE1S_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HGG0807056.1"
                     /translation="MDKQFFQMFLMFSQIQTVAIIAVLFVIFYILKKMRDKKVNFSLR
                     MLFALFIGLGFGFALQYLAQFPDSKEASAIIWYNEAKHWFGFVSSVFVAFIKMLVIPL
                     VGICIIKVIIEIDKNIKISSLLSISLFWILFSTAIAASLGILLAYNFQLGDNFTAYEG
                     TRQIREIQTFSSIILGLIPSNIISVMNKENIIAIVIFAFFVGICAKKVSKKEEYAQAF
                     QTFENFVLVFYNIMMNMTAAVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIILTYIA
                     MFIMFGVHFLFLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNP
                     AVANFVASIGTTTGLNGCAGYFPAMAAIFVAFATHTPIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGDNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKAIDKEIYNS"
     gene            complement(5420..7789)
                     /locus_tag="ACJE1S_001526"
     CDS             complement(5420..7789)
                     /locus_tag="ACJE1S_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HGG0807057.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTFDAIKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYF
                     EKGEKEGRILLGLKEKYDLDDLNDYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDVSDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTQDLCDLYGEAFEKRYEEYEKDESIAKEIVEAKELWKKILLN
                     YFETGLPFLCFKDNANKANPNAHVGIIRSSNLCTEIFQNTEPNYYKIKVVFENGDEKH
                     FDEEERVIIDGGYEKPAKKISTLDSFNGNKVYIVEKYKSDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEARIHWG
                     SDEHLNKIDEIMEKISYEAINASSNLAIEKGSYPDFEGSNWSKGIFPIDVASEKAKAL
                     TLREGLFNQSECDWDKLREKVKEDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLETWQYYTPAYELDQRILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNDIYQLAWELGVKSTYYLRSESPDSEKINIADRSIECEGCQ"
     gene            complement(7804..9132)
                     /gene="purB"
                     /locus_tag="ACJE1S_001527"
     CDS             complement(7804..9132)
                     /gene="purB"
                     /locus_tag="ACJE1S_001527"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG0807058.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLINDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQMKESLDLILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLEHAREVISYGKISGAMGNFAHAPLEFEEEVCKNLDLKPAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFVTADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSQRVLLELPFKGISREEAYKIVQRNAMKVWTDLQNGKAA
                     INEKNESLFLLALLADEDLRKSLSEEDIRKCFDYNYYTKNVDAIFARTFK"
     gene            9212..10108
                     /locus_tag="ACJE1S_001528"
     CDS             9212..10108
                     /locus_tag="ACJE1S_001528"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG0807059.1"
                     /translation="MAYTKIKLSNNGKKAFQVLIDNLKININEAQKLIDKKRLFCDGI
                     LVEEKNKILKGDVELIVYENNPKGVEIVFENEDFAVLEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILVAKHKEAQIELKTMFEKKQIQKEYLALASGEIK
                     VNFIVDQAMDLTKDYDDVKTRMQICENGKKAITEFEVLSFYPKLNATLLLCKPLTGRQ
                     HQIRVHLFYKNHKILGDPLYGLEKKDIEKILDDKMDIEERIKLSGAKRLCLHSYRLKF
                     NYNGENFDIFSKKGMEKILAAF"
BASE COUNT         3237 a         1893 c         1469 g         3519 t
ORIGIN      
        1 taaattcatt cttagaaata cttccaagca aactaatatt ttcatacaat tggggttctt
       61 tgtcaaaatt aaaaaataaa gcttctatgg ttttattatc ttttgtgagt atgagtttta
      121 gatgcttttc atcttttcct aaaaattttt tatttttaac ataaagattt tccaaaataa
      181 aaaaaggacg cggattttta tgcccaaaag gctcgaaaga ttctaaaatt tcaagcattt
      241 caaaatcgat ttcattagga tctaaaatac ctaaaatctc atctgtgtct aaaaattcgc
      301 tttgagaaat ttccatacat tcttttttta ttatggtttt aaatttttca aaagaatcaa
      361 gatctaaact aagacctgca gcacccttat gcccgccata attactcaat atgaaatttg
      421 ccttagaaat caaagctaaa atatcaattt ttccaacact tcttgcactt ccttttaagc
      481 gctgatcgtt ttgtgaaaat acaaaagcgg gtttattgaa atgttttgct aaacggcttg
      541 ctactatccc taaaactccc tcatgccaat ttaaacccga tacaacaata caagaatcat
      601 tttcatcaat ttgacttaaa ctatcttcaa aaagctgttt ttcctcatct ttacggcttt
      661 cattaaagct aatgatttgc tctaaataag ccgaagcttt atccaagtcc tttgtatgta
      721 aaaattcata agaaatgctt gcatcatcca ttcttccagc actattgata agaggagcga
      781 ttaaaaatcc tatattatcg agtgcaaatt tatctttttg ataatattgc ttaatcgcct
      841 taaaagcaac tcttttggat ttgttaatac actcaatccc tcgtctaacc aaggctctat
      901 ttaaatctct taattccatc atatctgcaa caatggcaat agctagaagt tctaaaaatt
      961 tacccatatc gtattttaat ttacaaacct cttttaaagc agctattaaa taccaagcca
     1021 cttgcgctcc gcaaatttca atatctggaa aatcacaatc tttttgctta ggattgataa
     1081 tcgcaaaggc atcgggtaaa gtatcttgag gcatatgatg atcagttata attaaatcaa
     1141 tatttttttc tttacaaagc ttggctgctt caaaggctgc tataccatta tccactgtaa
     1201 taatcaaatt tacatcaagt tcattgataa tttcagcatt taaaccgtat ccatctttaa
     1261 agcggttggg aattcttact gtataatcaa aacctatatc atcaaaaaat tctgccataa
     1321 taacacaaga gataatccca tcaacatcat aatcacccac tatagcgatc ttttcatttt
     1381 tatctatagc ttctttaatg cgatttgccg ccttgtaaat atcttttaag cagcaaggca
     1441 aaggtaaatc gcaaagtttg gtatgtaaat ctttttcgaa acgagaagct agaatttttc
     1501 taatttcatt tttatcaatc gtcttcatag cttatagccg ccttgataaa accacaaatc
     1561 acaggattta cacgctctaa tcttgaggta aattcagggt gaaattggac agctaaaaag
     1621 aaaggatgat tgtttaactc cacagcttct ataagccctt cactctctcc acttactatc
     1681 aagcccttat cttcaaattc tttacgatat tttggattgg cttcatagcg gtggcggtgg
     1741 cgttctttga tattttttgc attattataa accttagcta aaagggagtt aggcttgact
     1801 ttacactcat aagatcccaa acgcatagtt ccacctaaag gtgttttagc agtacgaatt
     1861 tgttttttac cgctcgcatc cataaattca tcgatgagat aaacgatagg attggaacat
     1921 ttatcatcaa attcactcga atttgcatct tcaattttta acacatgtct agcaaattct
     1981 accaatgcaa gctgcatacc caaacaaatt cccaaaaatg gaattttatt ttctcttgcg
     2041 taattgatag cctttatttt accctctact ccgcggtaac caaagccccc tgcaaccaaa
     2101 attccactca catttttaaa tgcttcagca ctttctaaat tttcaagctt ttcactatct
     2161 acccattgaa gctctactct agtatcaagc gctgcacctg catgaatgat agcttctgta
     2221 agactcttat agctttcttt tagatctaca tatttaccca caaaagcgat tttgacttca
     2281 ttacttggag ctataactct ttttactagg atatcccagt tttccatgtt tggttttaaa
     2341 tttttcaaat ccaaaataga agcgatagga tttaaaatat cttgctttaa gaaatttagt
     2401 ggaatttgat aaatacttgc tgcatcaaca ctttctataa cgcaattttt ttctacaccg
     2461 catgaaatag cgattttatc ttttaaatct ctatctaacg ctttttcact acggcaaata
     2521 atcatatcag gactaatgcc tatgcgtctt agttcaccta cgctgtgttg ggttggtttg
     2581 gtttttaact cccctgcagc cttaataaaa ggcactaggg ttaaatgaat attcatagca
     2641 ttatttttac ccacttctaa acgcaaagca cgaatagctt ctaaaaacgg caagccctcg
     2701 atatccccga cagttccacc tatctctacg attaagatat ccttgccttc tcctgctttt
     2761 ttaatacgat ctttaatctc tcctacgata tgtggaataa cttggatggt tttgccaaga
     2821 tattctccgc gtctttcttt ttcaatcacg ctttgataaa cgcgtcctgt ggtgaaattg
     2881 ttatcttgcg ataaactctc atccaaaaaa cgctcataat gccctaaatc aagatcggtt
     2941 tctgctccat catctgtaac aaaaacttct ccatgctcaa atggactcat ggtgccagga
     3001 tcaacattta tataaggatc tgcttttaaa atacttactt taagtcctga atttttcaat
     3061 aaagttgcaa tacttgcagc tgctattcct ttgcctaagg agcttaacac tcctcctgta
     3121 acaaaaatat atttggtttg tttattcatt attaataagc cttaattttt tgtctaatta
     3181 taactcgata aaacttttta tttcattaga attttaagta aaaaatgtaa gaattataaa
     3241 aaaatttatc aaggaaaatt tatgcaaatc actttacttt ttcatacccc tctttctgta
     3301 tgttcgcatg caacaagaac ttgttggcaa agttttgata aaggagattg tggtggagaa
     3361 aaagataaag aactcatcga tcgcgtagga aataaattta aacatgcctc aaccttagag
     3421 catttaaatt atacttttta tattcaagaa atttcaaggg cttgcttaca agaagttgct
     3481 agacatcgcc atacaagtcc tagtgttaaa agcacgcgct acaccctaaa agaacttcgc
     3541 aatgagggtg aatttaaaat aggagatttt gaaaatgcaa gccgttatct tgtcctttgt
     3601 ggcaatgaag aagttgataa tgctagcatt caagctttag aaaatttacg ccttatttta
     3661 caaaaaagta taagcttgga tatagccaaa tactgcttac ctgagagtta taaaaccgaa
     3721 cttactttaa caatcaatgc tagaagtttg caaaatttta tttctttgcg tagctcaaaa
     3781 tctgctcttt gggagattcg aaatttggct aatgctttat ttgaagcctt accacaagat
     3841 catcaattta tttttgagca ttgtttgcat aaagatattc attaaatcat actaatttta
     3901 tcttatttat aatattttta tggtatcatc cataagatca agattttatg gacatacttt
     3961 aaatatattt catacttgat atagtttctt aaaggacttt ttatggataa acaatttttt
     4021 caaatgtttt taatgttctc gcaaatacaa actgtagcta ttattgctgt gctttttgta
     4081 attttttaca ttcttaaaaa aatgcgagat aaaaaggtaa atttctccct tcgtatgctt
     4141 tttgctcttt ttataggcct aggctttggt tttgctttgc aatatctagc tcaatttcca
     4201 gatagcaaag aagcaagtgc tatcatttgg tacaatgaag caaaacattg gtttggtttt
     4261 gtaagctctg tttttgtagc ttttataaaa atgctagtta ttccgcttgt gggtatttgt
     4321 atcattaaag tgattataga aattgataaa aatataaaaa tttcttcctt gcttagcata
     4381 agcctctttt ggatactttt tagtactgct atagctgctt ctttgggtat attattggct
     4441 tacaattttc aattaggtga taattttact gcttatgaag gaacgagaca aattcgcgaa
     4501 attcaaactt tttcaagtat tattttaggt ttaattccta gcaatatcat ttctgttatg
     4561 aataaagaaa atatcatagc cattgtaatt tttgcttttt ttgtgggaat ttgcgcaaaa
     4621 aaagtttcaa aaaaagaaga atatgcacaa gcttttcaaa cttttgaaaa ttttgtctta
     4681 gttttttata atattatgat gaatatgacg gctgcagtga ttcgatttat gccttatgct
     4741 gtagtttgta tgatggcaaa tgttttacta agcaatggtt ttgaagcaat caaaactgca
     4801 ggacttttta tcattcttac ctatatagca atgtttataa tgtttggtgt gcatttttta
     4861 tttcttgctt ctcaaggact aaatcctata aaatacgcaa aaaaagcttt tcctgtatgg
     4921 ctgtttgcat tcagttcaag atcttcttta gggactttac cgatgacgac ttcaactttg
     4981 caaaacaaat ttggagtaaa tcctgccgtg gctaactttg ttgcctctat aggaacaaca
     5041 acgggactta atggttgcgc gggttatttc ccagctatgg cagcaatctt tgtggcattt
     5101 gctacacaca cgcctataga ttttactttt gctttgatga tagtattagt agcggttatt
     5161 ggatctttag gtattgctgg agttcctgga agtgcaacta tggcagcttc tattatgctc
     5221 gcaggaattg gatttgggga taattttgtt atgcttagcc ttattttagc tattgatcct
     5281 atcattgata tggcaagaac agccagtaat gtttcagggg ctatgacctc agcgctttgc
     5341 actgcaaaaa atttaaaagc catagataaa gaaatttata attcttaaaa agatttaaac
     5401 ctaatatagg tttaaatctt tattggcaac cttcacattc tatgctacga tcagcaatat
     5461 ttatcttttc gctatcaggg ctttcgcttc ttagataata agtcgatttt actccaagct
     5521 cccaagctaa ttgatatata tcatttaagt aacccccgct tgctttatcg agtgataaaa
     5581 agatatttaa actttgccct tgatctatcc attttccacg cactgctgca gctttaacaa
     5641 gaattctttg atcaagttcg taagctgggg tataatattg ccaagtttca agacttaaat
     5701 taggcactac aacaggtatc ataccgctta aattttgctc aaaccactta cgcttataaa
     5761 caggttcgat agtttgtgtt gttcctacca aaatagaaat tgaagaagta ggagcaatgg
     5821 ccatcaaata accatttctc ataccatctt cttttacttt ttccctaagc ttatcccaat
     5881 cacattcgct ttgattaaac aacccttctc ttagggttaa agctttggct ttttcacttg
     5941 ctacatcaat aggaaaaatc cccttactcc aatttgatcc ttcaaaatca gggtaagagc
     6001 ctttttctat cgctaaattt gagcttgcat taatagcttc gtagctaatt ttttccataa
     6061 tttcatcaat tttatttaaa tgctcatcac taccccaatg aattcttgcc tcagcgagca
     6121 tttgtgcctc acccataacg ccaagtccta tggcgcgaga ttttaaattg gtatccttta
     6181 cttttctatg agggtaaaag tttaaatcaa taacattatc aagcatacga atagcagttg
     6241 gcaccacgcg ttctatatct tctttagtat atactttgct aagatttata ctggctagat
     6301 tacaaactgc agtttttcca tcgcttttgt atttttctac gatataaacc ttgtttccat
     6361 taaaactatc aagcgttgaa attttcttag caggtttttc atatcctcca tcgataataa
     6421 cgcgttcttc ttcatcaaaa tgtttttcat caccattttc aaatacaact ttgatcttat
     6481 aataatttgg ctctgtattt tgaaaaattt ctgtacataa atttgaactt ctgataatcc
     6541 ctacatgcgc atttggattg gctttatttg cattatcttt aaagcataaa aaaggcaagc
     6601 ctgtttcaaa ataattaagc aaaatctttt tccaaagctc tttagcctct actatttctt
     6661 tagctatact ttcatctttt tcgtattctt cataacgctt ttcaaaagct tctccatata
     6721 aatcacacaa atcttgtgta tctgcaggat caaaaagagt ccatttatcg tttgctctca
     6781 ctcttttcat aaaaagatcg ttaatccaca aagcagggaa aagctcgtgt gcacggcgtc
     6841 tttcttcgcc tgaattttta cgcaaatcga taaaatcact tacatccata tgccaaggtt
     6901 caatataaac agcgatcgca ccctttcttg tgccaagctg atctacagcc acagctatat
     6961 cattggtgat ttttaaaaaa ggaatgatac ctcctgcggc atttttatgc ccatctatgc
     7021 ttccacccat tgcgcgaact ttagaccaat cccagcctat acctccacca aatttagaca
     7081 ataatgccat ttcttggtaa gaatcaaaaa ttccctcgat attgtcagga gttgagccta
     7141 tataacaaga gctaagctga tggcgtgttg ttcttgcgtt tgataaagta ggagttgcaa
     7201 gcatgagttc aaatttagag atgagatcat aaaatttctt tgcccattct tgaggattaa
     7261 attcattctg tgctaaaaac atagcaatag ccataaacat ttgctgagga agctctatag
     7321 gcataccctt gctatcttta atcaaatatc tatcatatag agttttaatg ccaagataag
     7381 taaattgcat atcgcgttca ggcttaatat aatcatttaa atcatctaaa tcatattttt
     7441 ctttaagccc aagtaaaatt ctaccttcct tttcgccctt ttcaaaatac tcacgcaaat
     7501 gattatagcg attcattcca ttcacttttt tatacaagtc aaacaaaaaa agtctagctg
     7561 cgacaaaggt ccagtttgga caatcaatat cgattttatc tacagcagtt ttaatcaatg
     7621 ttttttgaat ttcttcagtt gaaattccat ctcgaaattg aattttagca tcaagctcga
     7681 gctcgcttag attaacgcct tctaaatctt ttatagcatc aaaggtgcat tttttgatct
     7741 tagaaacgtc taattcttct gtgcgaccat ttcttttaat aactttcatt gtattccttg
     7801 tccttattta aaagttcttg caaagattgc atcaacattt tttgtgtaat aattataatc
     7861 aaaacatttt cttatatcct cttcactcaa gctttttctc aaatcctcat cagctaaaag
     7921 tgcaagtaaa aataagcttt catttttttc attgatagca gctttgccat tttgcaaatc
     7981 agtccaaact ttcatcgcat ttctttggac tattttataa gcttcttcac ggctaatgcc
     8041 cttaaatgga agctctaata aaacgcgttg tgaaaatacg agtccacctg taagatttaa
     8101 atttttcatc atattttcag gataaaccaa aagcttatcg atcaaatttg taagacgcat
     8161 gagcataaaa tcagctgtaa caaaggcatc aggcaagata aatctttcaa cacttgaatg
     8221 cgatatatct ctttcgtgcc ataaagctac attttctaaa gcaggagtta caaaggatct
     8281 aagcacacgg caaagccctg tgatattttc acttaaaacc ggatttcttt tatgtggcat
     8341 agccgaactt cctttttgcc ccacgctaaa atactcttca gcctcatata cttctgttct
     8401 ttgaaaatgt cttatcgcaa cagcaatttg ctcgcacgat gaagccaaaa ttgcaatggc
     8461 tgaaattact tgtgcgtaac gatctctttg gatcacttga tttgaaacag gtgcaggttt
     8521 aaggtctaaa tttttacata cttcttcttc aaattctaaa ggagcatgag caaaatttcc
     8581 cattgcacca ctaatttttc cataacttat cacttctctt gcatgctcta aaagctcttt
     8641 tgcatgcaaa atttcatcat accaaatagc taacactaaa ccaaaagtga taggctctcc
     8701 atgaattcca tgacttctac ctaccattaa agtattttta tgttccaaag cgcgtttttt
     8761 aatcacttct aaaagcaaag aaacatcttc taaaatcaaa tccaaacttt ctttcatctg
     8821 taaagctaca gcggtgtcga tacaatcaga acttgtcatc gcataatgta caaagcggct
     8881 ttcctctcct aaactttcac ttacacttgt aagaaaagca atcacatcat gcttggtagt
     8941 tttttctatc tcatcaattc tagctatatc aaatttagca tttttaagaa ttttttcaca
     9001 atctgtatca tttataaggc ctagtttatt ccaagctttt acagcagcta gctctacttt
     9061 tagccatgca tcatattttg cttgcatatc ccattttttg gccatgattt ctctgctata
     9121 tctttcaacc atctttgaaa cctttttagc tataattttt ttaaaaatga aaatggaatt
     9181 ttatctaaaa aaatttagag aaaggttaag tttggcttac acaaaaataa aactatcaaa
     9241 caatggaaaa aaggcgtttc aagtccttat agataatttg aaaatcaata taaatgaagc
     9301 ccaaaaactc atagacaaaa aaagactttt ttgtgatgga attttagtag aagaaaaaaa
     9361 taaaatctta aaaggcgatg tagaattaat agtctatgaa aacaatccca agggagtaga
     9421 aattgttttt gaaaatgaag attttgcggt acttgaaaaa gaaagtggaa ttttaagtca
     9481 tcctaatggc agacactgca aatacagcct tagtgatgaa atttggcacc tttggggaaa
     9541 agaagcttgc gtagcccata ggcttgataa agaaacaagt ggactcatac tcgtagccaa
     9601 acacaaagaa gcacaaattg aacttaaaac tatgtttgaa aaaaaacaaa ttcaaaaaga
     9661 ataccttgcc cttgcaagtg gagaaattaa agtaaatttt atagtcgatc aagcgatgga
     9721 tttaacaaaa gattatgatg atgttaaaac tagaatgcaa atttgtgaaa atggaaaaaa
     9781 agcaatcaca gagtttgagg ttttgagctt ttatcctaag ctcaatgcta cacttttgct
     9841 ttgcaaacca ctcacaggca gacaacacca aattagagtg catttatttt ataaaaacca
     9901 caaaatttta ggcgatccac tctatggcct tgaaaaaaaa gatatagaaa aaattttaga
     9961 tgacaaaatg gacatagaag aacgcataaa actaagcggt gctaaacgct tgtgtttgca
    10021 ttcttatcgt ttaaaattta actataacgg agaaaatttt gatatttttt caaaaaaggg
    10081 tatggaaaaa attttagcag cattttaaaa taaaggcg
//
LOCUS       DBBXOW010000065         9455 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.066, whole genome shotgun sequence.
ACCESSION   DBBXOW010000065 DBBXOW010000000
VERSION     DBBXOW010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9455
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.066"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..1307
                     /locus_tag="ACJE1S_001529"
     CDS             <1..1307
                     /locus_tag="ACJE1S_001529"
                     /inference="COORDINATES: protein motif:HMM:NF016357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0047355 - CDP-glycerol
                     glycerophosphotransferase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HGG0807060.1"
                     /translation="LTRNKIAKFFTFWIPIRKIRKKLRQKIENLLYIPYIKKIQQTQF
                     DIQQKIKSKKISKLNIAFFVMYDSIFPGKTLFENMNKNFLFNTHLIVIPDITKGEENM
                     YFQMTKTYNTFRSIYTNVLLSYNFNTKTFEDLGKEMDLICFSNPYDSATHKFYQIKYC
                     ALHSLTFHIPYSYTGFLQYNLKIFSSIEYSLFWKIFVENNNTLQTIKQHQMYHASNLK
                     LSGYSKMDSLNNKKTIKQKTQPIIILAPHHTVQKDFALQLSNFLRFSDFYLKLPAMYP
                     NIDFIFRPHPLLFINLENNKIWSKEQIKNYIHTLTSYTNVSYENGGDYFESFIRSDAL
                     IHDCGSFIAEYLYLDKPECFIFQNQQQIDHEFTNDGKKVLEHLYMAQTEKDIIDFIDN
                     IVIKNMDFLKEKRIQFAKENIRFNHPYATQCIMDFIKMELTK"
     gene            1304..2353
                     /locus_tag="ACJE1S_001530"
     CDS             1304..2353
                     /locus_tag="ACJE1S_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HGG0807061.1"
                     /translation="MNKIDKIYCMSHYVAFRFIKNENINFFEGLKHKTFQQKENLLYE
                     IFNITDIEKVIKKTIEDFYIPNKTALLLSGGIDSAILASYLPKNTKVFTFKCIANGAI
                     DETSQAKKYADAYCLDHEIIEMYWEDFEKLTPEILQYNKTPFHSIEVQLVKACKIAKQ
                     AGIERIIVGDGADYVFGGMDKLLSQDWDYDSFIKRYNSIEPSMILKDYIDVSDVYKPY
                     KLDNNKIDFMAFMKDIMDIESYTSYMHAFEKENIHYLDPYSHMKLAFPLDLQRIRNGE
                     PKYLIRELFSKRYPNLNIPDKIPMPRATEQWLKNYVPKRKEFKTENINILTGDQKWLV
                     YCLETFLNMYDKGEL"
     gene            2356..2772
                     /locus_tag="ACJE1S_001531"
     CDS             2356..2772
                     /locus_tag="ACJE1S_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HGG0807062.1"
                     /translation="MTTLGYTSGVYDLFHIGHLNLLKNAKGLCDKLIVGVTIDELVQY
                     KNKKSVIPFSERIEIVRSIKYVDAAIPQENIDKYQMWEKLHFDVLFVGDDWFNTPNWN
                     IMEEKFKKVNVRVIYFPYTKGTSSTLINETLKNLRQ"
     gene            complement(2791..3606)
                     /locus_tag="ACJE1S_001532"
     CDS             complement(2791..3606)
                     /locus_tag="ACJE1S_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG0807063.1"
                     /translation="MPQLSIIIPLFNSCDFILRALQSCINQTLKDIEILIIDDKSKDN
                     SLNIVLEFAKKDERVKIFQNDENLGTFATRNLGVLKSRADFIMFLDSDDFLALNACEV
                     ALTKIKQGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLEFLSKQRHFCWSVWAKC
                     FKKDIILKIFEKVKIDERLSCGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYEN
                     KNQEILNQNYQDKKKSNEIIKKLSKEFLHDEFHQKLFEVLEREKEGIIKRLTI"
     gene            3665..4609
                     /gene="waaF"
                     /locus_tag="ACJE1S_001533"
     CDS             3665..4609
                     /gene="waaF"
                     /locus_tag="ACJE1S_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HGG0807064.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTAL
                     FKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFTFRSAFSSKIILHILKTRQRYFF
                     DKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHIAAVYKVKTVAIFGPTKFTQTSPWQNENAKLV
                     HLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT"
     gene            complement(4592..6046)
                     /locus_tag="ACJE1S_001534"
     CDS             complement(4592..6046)
                     /locus_tag="ACJE1S_001534"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807065.1"
                     /translation="MKNIILIDAPGEWVETILGLNINISLIITNQTSNIKKKFGNVIE
                     NIFPRDVKNKEFNSVYFSNYNLSYEELEKYRSTQIKVEHYLRRFLVNDGLIQYYYHMA
                     LAYWLDFFSKKSIDMVFLGTVEHGAFWDSILIDIAKNLNIPIFIISYSAGVSISSDNG
                     NEDIDIKHIVHYNSLNFIDLSNIENIKRDEDRVSMEKYMHLLKKAHNKNSSSKITFKN
                     PIRYYFNTRIKTLFSTWLYYLSTSMIKYNIENKKDSFMHLSKREILKQSSFVGSLRRV
                     YCNISRKFSLSNEKYIYYPLHLDPEASIMARSILTSQIFIIQWISSVLPKDWKLLVKE
                     HPHQFFIYERERFYLKNINLYRDFSFYSQIKDLPNVEFVDINISSKELIEKSQAIASI
                     CGSSLIEGIAYKKPILVFGKSLSFVELLQDSFVIKDREGLRYAIEKIKNGFTPQYSDL
                     ELIINKYTFLKNSRAFDNKDFFSSIFKYLLSIKF"
     gene            complement(6058..6618)
                     /gene="gmhA"
                     /locus_tag="ACJE1S_001535"
     CDS             complement(6058..6618)
                     /gene="gmhA"
                     /locus_tag="ACJE1S_001535"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HGG0807066.1"
                     /translation="MINLVEKEWQEHQKVAEESEILKGQITKVGELLCECLKKGGKIL
                     ICGNGGSAADSQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNENDILIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGKMNELCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDEGF"
     gene            complement(6615..8000)
                     /gene="rfaE1"
                     /locus_tag="ACJE1S_001536"
     CDS             complement(6615..8000)
                     /gene="rfaE1"
                     /locus_tag="ACJE1S_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HGG0807067.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYANLKSLGADVLALGVVGDDESGKFLKENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDTSAILLEDELVELFNKRIENFKAVVLSDYAKGVLTPKVCKAVI
                     EKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGKNLEKGIKKLKE
                     DFVLRYSIITLSEAGIALFDENLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIF
                     KACELANEAAAVVVSKIGSVSVTFDEMKSLKRVGFEKKIKTKEELLKILEQSDKKIIF
                     TNGCFDIVHFGHIKYLEKAKRLGDILIVGLNSDKSVKRLKGEDRPINSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILVKGADYKDKLVVGSNLVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            complement(7993..8946)
                     /gene="rfaD"
                     /locus_tag="ACJE1S_001537"
     CDS             complement(7993..8946)
                     /gene="rfaD"
                     /locus_tag="ACJE1S_001537"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HGG0807068.1"
                     /translation="MKIAITGGAGFIGSQLALNLQEKHEILIIDKMRSNATFENGNLQ
                     SFGHFKNLLDFNGELFVGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIKLHAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVINANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYQPKFSLEEGIKDYLDEIKRLFEKEVNA"
     gene            complement(8943..>9455)
                     /locus_tag="ACJE1S_001538"
     CDS             complement(8943..>9455)
                     /locus_tag="ACJE1S_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HGG0807069.1"
                     /translation="KALFLDRDGIINIDKKYIYKIQDFEFCDGIFELCRYFLAQKYLL
                     FVATNQSGIARGYYTQEDFFKLCDFMLNEFLKENIKIDKIYHCPHLEGCECRKPKAGM
                     LLKAREEFDIDMGNSIFIGDNLSDMQAGKNAQIGTLCLVNEEEKEGDFFRQFKNLNEL
                     LDFFKKKEDR"
BASE COUNT         3421 a         1625 c         1102 g         3307 t
ORIGIN      
        1 aattgacaag aaacaaaatt gcaaaatttt ttactttttg gattcccata agaaaaattc
       61 gaaaaaaatt aagacaaaaa atagaaaatc ttttgtatat accatatatt aagaaaattc
      121 aacaaacgca atttgatatt caacaaaaaa taaaatcaaa gaaaatatca aaattaaata
      181 tagctttttt tgttatgtat gatagtattt ttcctggcaa aacattattt gaaaatatga
      241 ataaaaattt tttattcaat acacatttaa ttgttattcc agatattaca aaaggtgagg
      301 aaaatatgta ttttcaaatg actaaaacct acaatacctt tagatccatc tatacaaatg
      361 tattgttgtc atataatttc aacacaaaaa cttttgaaga tcttggaaaa gaaatggatt
      421 taatttgttt ttcaaatcct tacgattcgg caactcataa attttatcaa atcaaatatt
      481 gcgctttaca ttctctaact tttcatattc catattctta taccggattt ttacaatata
      541 atctcaaaat ttttagctcg attgaatata gtttattttg gaaaatattt gtagaaaata
      601 ataacaccct acaaacaatt aaacaacatc aaatgtatca tgcaagcaat cttaaacttt
      661 ctggatattc gaaaatggat agcttaaaca acaaaaaaac aattaaacaa aaaacgcaac
      721 ctataatcat tttagcccct catcatactg ttcaaaaaga ttttgcatta caattatcta
      781 attttttaag attttccgat ttttatttaa aattgcctgc tatgtatccc aatattgatt
      841 ttatatttag accgcatccg ctactattca ttaatttaga aaacaataaa atatggagca
      901 aagaacaaat taaaaattac attcacactc ttacaagtta taccaatgtt agttatgaaa
      961 atggtggcga ctattttgaa agttttattc gctcagatgc cttaatacac gattgtggct
     1021 cttttattgc cgaatattta tatctagata aacctgaatg ttttattttt caaaatcaac
     1081 aacaaataga tcacgaattt accaatgatg gaaaaaaagt tctagaacat ctttacatgg
     1141 ctcaaacaga aaaagatatt attgatttca ttgataatat tgtaataaaa aatatggatt
     1201 ttttaaaaga aaaaaggata caatttgcaa aagaaaacat caggttcaat cacccttatg
     1261 caacacagtg tataatggac tttatcaaaa tggagttaac aaaatgaata aaattgataa
     1321 aatttattgc atgagtcatt atgtagcttt tagatttata aaaaacgaga atattaattt
     1381 ttttgaaggg ttaaaacaca aaacctttca acaaaaagaa aatttattat atgaaatttt
     1441 taatataaca gacatcgaaa aagttatcaa aaaaacaatt gaagattttt atataccaaa
     1501 taaaacagct ttgcttttat ctggaggaat tgatagtgct attcttgcat cttatttacc
     1561 taaaaacaca aaggttttta cctttaaatg tatagccaat ggtgcaatag atgaaacatc
     1621 tcaggcaaaa aaatacgcag atgcttattg tcttgatcat gaaattatag aaatgtattg
     1681 ggaagacttt gaaaaattaa ccccagaaat tttacaatac aataaaacac catttcactc
     1741 tatagaagta caacttgtta aagcctgcaa gattgctaaa caagcaggaa tagaaagaat
     1801 aattgtaggt gatggagctg attatgtttt tggaggaatg gataagttat tatctcaaga
     1861 ttgggattat gattctttta taaaacgcta taactcaatt gaaccctcaa tgatcttaaa
     1921 agattatata gatgtttctg atgtatataa accatacaaa ctcgacaaca ataaaataga
     1981 cttcatggct tttatgaaag atataatgga catagaatct tatacctctt atatgcatgc
     2041 atttgaaaaa gaaaatattc attatttaga tccttactca catatgaaat tagcatttcc
     2101 acttgatttg caaagaatta gaaatggtga acctaaatat ctaataaggg agcttttttc
     2161 caaacgctat ccaaacctta atattccaga taaaattcct atgccgagag caacagagca
     2221 atggttaaaa aactatgtac caaaacgcaa agaatttaaa acagaaaata ttaacattct
     2281 tacaggagac caaaaatggc ttgtttattg tcttgaaact tttttaaata tgtacgataa
     2341 aggggaatta taaaaatgac aactttaggc tatacttcag gtgtttatga tttgtttcat
     2401 ataggtcatc tcaatttatt aaaaaatgct aaaggattgt gtgacaaact aattgttgga
     2461 gttactatag atgaattagt gcaatataaa aataaaaaat ctgtaatccc tttttctgaa
     2521 cgcattgaaa ttgtaagaag tattaaatat gtcgatgctg caatcccgca agaaaatata
     2581 gacaaatatc aaatgtggga aaaacttcat tttgatgttt tatttgtagg tgatgattgg
     2641 tttaatacac caaactggaa tattatggaa gaaaaattta aaaaagttaa tgtaagagtt
     2701 atttattttc cttataccaa aggcacaagc tctactttaa tcaacgaaac gctaaaaaac
     2761 ttaagacaat aaaaatatat cttaagtttt ttaaattgta agtcttttaa taattccttc
     2821 cttttctctc tccaaaactt caaataattt ctgatgaaat tcatcatgta aaaactcttt
     2881 tgatagtttt tttataattt cattgctttt ctttttatct tgataatttt gatttaaaat
     2941 ttcttgattt ttattctcat atcttccatt tggattaaat tcataatgat aaatgcaagt
     3001 tttaaaaaca gctattttct cacaaaacat aaaataaaca taacaaaaaa gcacatcttc
     3061 gccgcaactc aaacgctcat cgattttaac tttttcaaaa atttttaaga tgatatcttt
     3121 tttaaagcac ttcgcccaaa ccgaccagca aaaatgcctt tgtttgctta agaattctaa
     3181 aaattccttt tgattaaaaa cttcatcttg tttaaagcga taaaattgtt tggttttaac
     3241 tctatgtaca aaagcatcaa aacaaagcaa atcaaagcct tgttttattt tggttaaagc
     3301 cacttcgcaa gcatttaaag ctaaaaaatc atcactatct aaaaacatga taaaatcagc
     3361 tctagatttt aaaactccta aatttctagt cgcaaaagtg cctaaatttt catcattttg
     3421 aaagattttt actctctcat cttttttagc aaattctaaa actatattta aactattatc
     3481 tttactttta tcatcgataa tcaaaatttc aatatctttt aaagtctgat ttatacaact
     3541 ttgtaaagct cttaagataa aatcacaaga attaaaaagc gggattatga tcgaaagttg
     3601 tggcatattt ttcctaaatt ttgttaaaat aataaaaaga attttatcaa agtttaggaa
     3661 atttatgaaa atttttatac atcttcccac ttggctaggc gatgcagtga tggcttcgcc
     3721 tgctttatac gctataaaag aacattttaa aaatgctcaa tttatccttt atggatcttt
     3781 ggtttccaca gcacttttta aagaatttcc taattctaaa atcatcatag aaaataaaca
     3841 atctcgctat aaacaagccc tatctttacg taaagaactt gataaaatcg atcttagctt
     3901 cacttttaga tctgcgtttt cttctaagat tatcttgcat attcttaaaa caagacaaag
     3961 atattttttt gacaaaaata agcacaaaga agaacatcaa gttttaaaat acctttattt
     4021 tatagaaaat tcactagata tcaaagctca ttctaaggat ttaaaactcc cttttaaatt
     4081 aaaatttcaa aatcctattg ttttaaaaaa tggcaaaaaa atcttaggtt taaaccctgg
     4141 agcaagcttt ggaagcgcta aaagatggga tgcgagttat tttgctaaag tggctttaaa
     4201 tttcagccaa agtcatgaga ttttaatctt tggcgcagga aaagccgaac aagaactttg
     4261 taatgaaatt tatcaaattt taaaagaaca aaacataaaa gtgaaaaatc tttgcaacaa
     4321 aactaccatc aaaacccttt gtcaaaatat cgctttttgc gatcttttca tcacaaatga
     4381 cagtggccct atgcatatag ctgcggttta taaggtaaaa accgtggcta tttttggccc
     4441 tacgaaattt acccaaactt caccttggca aaatgaaaac gcaaaattag tacacttaga
     4501 tctagcttgt atgccttgta tgcaaaaaat ctgcccttta aaacaccaca aatgcatgaa
     4561 agatttaaag cctgaaatgg ttttagaaaa attaaaattt gatacttaat aaatacttaa
     4621 aaatacttga aaaaaaatct ttattatcaa atgctctaga atttttcaaa aaagtatatt
     4681 tatttataat taattccaaa tcactatact gaggtgtaaa tccatttttg attttttcaa
     4741 tggcatatct caatccttct ctatctttaa ttacaaaaga atcctgtagc aactcgacaa
     4801 aactcaaaga tttaccaaaa actaaaatag gttttttata ggcaatccct tctattaaag
     4861 aagatccgca tatcgaagca atagcttggg atttttcaat caattctttt gaagaaatat
     4921 ttatatccac aaattctaca ttgggtaaat ctttaatttg ggaataaaaa gaaaaatctc
     4981 tatataaatt aatatttttt aaataaaatc tttctctttc ataaataaaa aattggtgcg
     5041 gatgctcttt aaccaataac ttccaatcct taggcaacac gctagatatc cattgtataa
     5101 taaaaatttg cgaagttaag atacttctag ccattataga tgcttctgga tctaaatgca
     5161 aaggataata aatatatttt tcattactta atgaaaattt tctagaaata ttgcaatata
     5221 cccttcttaa cgatcccaca aaagaagatt gttttaaaat ttctctttta cttagatgca
     5281 taaaactatc ttttttattt tctatattgt atttaatcat agaagtgctt aagtaatata
     5341 accatgtact aaataatgtt ttaatccttg tattaaaata atatcttatt ggatttttaa
     5401 aagtaatttt agaggatgaa tttttattat gggctttttt aagcaaatgc atatattttt
     5461 ccatactcac cctatcttca tctcgtttta tattttcaat attcgataaa tcaataaaat
     5521 ttaaactatt gtaatgtact atatgtttta tatcaatatc ctcatttcca ttatcactac
     5581 taatacttac tccagccgaa taagaaataa taaatatagg aatatttaaa tttttagcaa
     5641 tatctataag tatgctatcc caaaaagctc catgttcaac agtacctaaa aaaaccatgt
     5701 caatagactt tttactaaaa aaatcaagcc aatatgccaa agccatgtga taataatatt
     5761 gaattagacc atcattaact aaaaatctac gtaaataatg ctcaacttta atctgggtcg
     5821 atctatattt ttcaagctct tcatagctta agttgtaatt cgaaaaataa accgaattaa
     5881 attctttatt tttaacatct ctaggaaaaa tattttctat aacattacca aattttttct
     5941 tgatatttga agtttgattt gtaattataa gagaaatatt aatatttaac cctaaaatag
     6001 tttccaccca ttctccagga gcatctatta aaattatatt cttcatttac atccttatta
     6061 aaaaccctca tctatgatct gacaaagcgt gtgtatgatt aagatatgca tttcttgaat
     6121 tctagccgta tcatcacttg gcacgacaag attatgatcg caaagctcat tcatctttcc
     6181 acctcctttg ccactaagcc ccaaacaaag catatttagt tctttagcct ttttaaatgc
     6241 ttctaagaca ttaggacttt ttccactggt tgaaatgcct attaaaatat cattttcatt
     6301 tcccaaagct tctacttgcc ttgaaaaaac aaactcaaat ccataatcat tgcctatagc
     6361 actaagtgct gaagtgtctg ttgtcaaagc tatacccgct aaagctttgc gttctttttt
     6421 atatctgccg ctaagctccg ctgcaaaatg ttgagaatcc gcggcactcc caccatttcc
     6481 acaaattaaa atttttccac ctttttttaa acactcacac aaaagctcgc ctacttttgt
     6541 gatttgccct tttaaaattt cactttcctc ggcaactttt tgatgttctt gccattcttt
     6601 ttctactaaa tttatcattt tttatcctta atcttttcta taatcttact tgtactaaac
     6661 ccctcttcaa aatcgattaa ttcaactctt gaaactaaat ttgaacccac tacaagctta
     6721 tctttataat cggctccttt taccaaaata tcaggcttta aaaagcttat aagctctaaa
     6781 ggtgtatcct catcaaaaat cactacaaaa tccacaaaat aaaaagccgc aagcatacaa
     6841 gctctttgaa attctgaatt tatggggcga tcttcaccct taagcctttt tacactttta
     6901 tcagagttta aaccaacgat taaaatatcg cccaatcttt ttgctttttc aagatatttt
     6961 atatgtccaa aatgcacgat atcaaaacaa ccatttgtaa aaatgatctt tttatcgctt
     7021 tgttccaaaa tctttaaaag ctcttctttg gttttgatct ttttttcaaa acctacgcgt
     7081 ttaagacttt tcatctcatc aaaggtcaca ctcacactgc ctattttact taccacaaca
     7141 gctgcggctt cattggcaag ttcgcaagct ttaaaaattt caatttcatt tgccaaacaa
     7201 aaagccaaaa cggcaatcac actatcgccc gcccctgtta catcataaac ttctaaagct
     7261 ttagcaggtg cgatttttaa attctcatca aaaagtgcaa tccccgcttc tgaaagagtg
     7321 atgatagaat aacgcaaaac aaaatcttct tttaattttt taatcccttt ttctaaattt
     7381 ttaccctcta aattttcaaa tttcaaagcc tctaaagctt cttttttatt aggcgtgagt
     7441 agggttgcac cactatattt actaaaatca ctccccttag gatcaaccaa aacagggata
     7501 tttaaagcct tagccttttc tatcacagcc ttacaaactt taggggttaa aacaccttta
     7561 gcataatcac ttaaaaccac agctttaaaa ttttcaattc ttttgttaaa caattctaca
     7621 agctcatctt ctagcaaaat cgcactcgta tcctcttcat caagtcttaa aacttgctga
     7681 ttatgtgcca taatacgatt tttaaaaggg gttttgcgtc ctttttggat taaaaattct
     7741 ccttttaaat tttcttttaa aaatttccca ctctcatcat cacccacaac accaagcgct
     7801 aaaacatcag ctcccaagct ttttaaattt gcataaacat tcgcagcccc gcctaatctt
     7861 ttatcttctt taagagtttt agctaccaaa acaggagctt caggactaat gcgcgaacaa
     7921 tcacaccaag tataattatc caccataaaa tcccctataa ttaaaatttt aggtttttgt
     7981 tggcttaaaa actcaagcat ttacttcctt ttcaaaaagt ctttttatct catctaaata
     8041 atctttaatc ccctcttcaa gactaaattt tggttgataa tcccaagttt gatctagttt
     8101 tgcttcagta tggaattgat aagattttac ataaggattt gggatatatt cacaaggcaa
     8161 atcagtcttt aactcttttt gcaaaatatc aactatatct tgaaaggttc ttgctttacc
     8221 actgcctaca ttataaaccc cgcattttga atcaagggcg attaaattgg cattaataac
     8281 atctttaata taagtaaaat ctctataaat ttgatcactt ccttcaaaca atcgtggatt
     8341 ttttcctgct aaaatttgat ggccaaattg caaaaccata gaagcggttt tgtttttata
     8401 aaattcgcct tttccataaa cattaaaata tctaagtcct accaaatgag ctttatcgta
     8461 gtattttttc gctaacttat ccatcatcaa ttttgaaaaa gcataaggat tttttggttc
     8521 ttcatcttta cctacagttt gtggactttt tgcatcacca taaaccgaag ctgaacttgc
     8581 ataaataagc tttgcgtgaa gttttatgct gagttctata aaatctttaa aagtattaag
     8641 attcgtctgt aaaaccttag tttgatcaaa aaccgttgta tctgaaatcg ctgcttgatg
     8701 aaaaataatc tctggcttaa aatcttcgat tttttttaaa accttttcat cgttaatatc
     8761 acccacaaaa agctcaccat taaaatcgag taaattttta aaatgtccaa aactttgtaa
     8821 atttccattt tcaaaagtcg cattgctacg cattttatca atgattaaaa tttcatgttt
     8881 ttcttgcaaa tttaaagcca gttgcgaacc tataaatcct gcaccacctg tgattgctat
     8941 tttcatctat cttccttttt tttgaaaaaa tctaaaagtt cgtttaaatt tttaaattgt
     9001 ctaaaaaaat cgccttcttt ttcttcttca tttaccaaac acaaagtgcc aatttgtgca
     9061 ttttttccag cttgcatatc gctaagatta tcccctataa aaatagaatt acccatatct
     9121 atatcaaatt cttccctagc ttttaaaagc atccctgcct taggcttgcg acactcacaa
     9181 ccctccaaat gaggacaatg ataaatttta tcaattttta tattctcttt caagaattca
     9241 ttaagcataa aatcacaaag cttaaaaaag tcttcttggg tgtaatatcc tcttgcaatg
     9301 cctgattggt tcgtggctac aaaaagcaag tatttttgcg ctaaaaaata tctacaaagc
     9361 tcaaaaattc catcacaaaa ctcaaaatcc tgaattttat agatatattt tttatctata
     9421 tttataatgc catccctatc taaaaataac gcttt
//
LOCUS       DBBXOW010000066         9443 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.067, whole genome shotgun sequence.
ACCESSION   DBBXOW010000066 DBBXOW010000000
VERSION     DBBXOW010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9443
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.067"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            109..1278
                     /locus_tag="ACJE1S_001539"
     CDS             109..1278
                     /locus_tag="ACJE1S_001539"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HGG0807070.1"
                     /translation="MLTQRSQVLEESITLAITALANELKAKGEDVISFSAGEPDFDTP
                     QTIKNAAIAAIEKGCGKYTAVAGIADVLKAIQNKLKKDNNLSYETSEIITNVGAKHSL
                     FECIECLVEEGDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKINAEQLKKAIT
                     PKTKILMLNSPSNPVGSIYNKEELLSIAKVLEGTKIIVLSDEMYEKLRYDGFEFVAFA
                     SVSEDALNRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDEDIEKMRQAFEKRRDLALNMLHQIPNISVYKPEGAFYLFVNTQKIEK
                     DSMKFCQKLLEQEKVAVVPGIGFGMDGYFRLSYATSDELIKKGIERIANFIKNYK"
     gene            complement(1388..1729)
                     /locus_tag="ACJE1S_001540"
     CDS             complement(1388..1729)
                     /locus_tag="ACJE1S_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG0807071.1"
                     /translation="MKITQWNKADFSPKEVKINVLIDDEHSKEIQILLAKDSVMKEHK
                     APFAIRVQVLSGKIWFEVENEKFEFNTLDMISLEANVPHSLGGLEDSVIRLSLNKLDK
                     VQRVNAVLKKP"
     gene            complement(1799..2821)
                     /locus_tag="ACJE1S_001541"
     CDS             complement(1799..2821)
                     /locus_tag="ACJE1S_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HGG0807072.1"
                     /translation="MNLSFKTFDLSSKERQKAKKVQGKKYEIFLNENPQTHNAFKVSF
                     REVLRYYYLYPKNAKATFKLPFFKPNLKYFRTPHITWLGHSSLFVSYKNYKILIDPIF
                     NTHASPCSFINKAFKNAPVYNANDFDEIFAVIITHSHFDHLDEKSVKTLKDRAKFFIA
                     PLKVGNYLKSYGVSEKKIIELDWWSGVEFDDLRIVATPAQHSSSRGDGLNKTLWASFV
                     MEFLSADKRVFFSGDGGYFTHFKKIGAYFGGFDLVCLESGQFNAAWPFSHSFPDQILK
                     ETKDLNAKALMPIHWGRFLAGTHAWNGVVEYLYENSNLPLITPKMGEAYEVGSEFEQD
                     FWWKEG"
     gene            3022..3768
                     /locus_tag="ACJE1S_001542"
                     /pseudo
     CDS             3022..3768
                     /locus_tag="ACJE1S_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780055.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
     gene            complement(3828..5699)
                     /gene="dnaK"
                     /locus_tag="ACJE1S_001543"
     CDS             complement(3828..5699)
                     /gene="dnaK"
                     /locus_tag="ACJE1S_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HGG0807073.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVTDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLASEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVKDAGLDKNEIKEIVMV
                     GGSTRVPLVQEEVKKAFGKELNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLNELGEKVADSDKENIQKALDDL
                     RETLKNQNASKEEIEAKMKALSEVSHKLAENMYKKDEPNAANDKKKKDDDVIDAEVE"
     gene            complement(5722..6252)
                     /gene="grpE"
                     /locus_tag="ACJE1S_001544"
     CDS             complement(5722..6252)
                     /gene="grpE"
                     /locus_tag="ACJE1S_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HGG0807074.1"
                     /translation="MSEQKQEIENENAENSEHLQDENLQNIEDVEQNKLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAINVECQDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            complement(6249..7043)
                     /locus_tag="ACJE1S_001545"
     CDS             complement(6249..7043)
                     /locus_tag="ACJE1S_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HGG0807075.1"
                     /translation="MMKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRV
                     YLKRLSDEGLITQLHISSGRIPTILTMQNYWQNFWEKEQDKNIHIKNESFLKELSKEF
                     EIYCLVYGGRSLVLKEVLDLNAKFIVLDFKEEELVLKYEKEAWNFLQSLIGLDLSSIE
                     KIALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCQIHRHFKESLE
                     FEPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            complement(7343..9433)
                     /gene="cfrA"
                     /locus_tag="ACJE1S_001546"
     CDS             complement(7343..9433)
                     /gene="cfrA"
                     /locus_tag="ACJE1S_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent ferric enterobactin receptor
                     CfrA"
                     /protein_id="HGG0807076.1"
                     /translation="MKKICLSVCAIGLLSSNAISQNVELDSSIVSASGFTQDIKEAPA
                     TINVISKKELQSKPYRDIAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLVLIDGR
                     RQGIGGEVGPNGFNEISNSLLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKVS
                     DKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRFREFYRQQSNVEFTN
                     GSGQRVQGDQAQSPTKANNFNIGTRISYLANDYNTFIFDIDFSRNHYDNKQGQLGTIT
                     SPGRTPGSLTGGYADIMEVDKFVTYLSHEGIYENFSITSGLQYNRVSNDGREVVGQST
                     QPFLGENRDIVAEDIILDTKSVIPLGQSHILSAGGEYRLEKMQDKIANPTNFDQYLLA
                     IFAEDEYSIKDDLRLTFGARYNHHEIFGNNVSPRAYVVYNPTNELTLKGGVSTGFRTP
                     YANRLINGTYSYSGQGRFPTYGNPDLKEETSLNYEIAAIYNNDLFYVSATGFLTNFKD
                     KISSQSYNNSEPIPGIGTCDADRCSRAINHGKVEYKGVELGAGISPLDNLNVNFAYTY
                     LDTEVKEAQDRSVIGKPEQDSLKHNIMLKTEYSFYNKFTPWIKGEWQIDRYMGDTNIN
                     REYYKDIFLASMGVRYDINKQWSINAAIYNLFDKSFTNGWESYASGSGSTWVNTYNRI
                     EEGRRMYISINGNF"
BASE COUNT         3052 a         1753 c         1289 g         3349 t
ORIGIN      
        1 aacgaatttg cacattagtt catttttaca ttattaattt ttaattaaat ttactacata
       61 agtgcgtttt tttgctaaaa ttagacaaaa aattcaaaag gacaacagat gttaacccaa
      121 agatcacaag ttttagaaga atccatcact ctagcaatca ctgcgcttgc taacgagtta
      181 aaagctaagg gtgaagatgt gatcagcttc tccgcaggtg agcctgattt tgacacccca
      241 caaaccatca aaaatgcagc tattgctgcc atagaaaagg gttgtggtaa atacactgct
      301 gttgcaggaa ttgctgatgt attaaaagct attcaaaaca aactcaaaaa agacaataat
      361 cttagctatg aaacaagtga aattattaca aatgtagggg caaagcattc tctttttgaa
      421 tgtatagaat gtctagttga agaaggcgat gaagtcatca ttcctagtcc ttattgggtg
      481 agctatcctg aaatggttaa atttgcaggt ggaaagcctg tatttatcga gggtttagaa
      541 gaaaatggct ttaaaatcaa cgcagagcag cttaaaaaag ccatcactcc taaaactaaa
      601 attttaatgc ttaattctcc ttcaaatcct gtaggctcta tctacaacaa agaagagctt
      661 ttaagtattg ctaaggtttt agagggtaca aagattatcg tattaagtga tgaaatgtat
      721 gaaaaacttc gctacgatgg ctttgaattt gtagcttttg caagtgtaag cgaagatgct
      781 ttaaatcgca ctgtgaccat caatggactt agtaaatgcg gtgctatgcc tggatggcgt
      841 tttggctata tggcaagtaa aaacaaagcc ttgatttcag ctgttaaaag acttcaaggc
      901 caaagcactt caaatatctg ctctatcact cagcacgctg ccatacctgc cttaaatgga
      961 gaatgtgatg aggatataga aaaaatgcgt caagcttttg aaaagcgtcg cgatttagcc
     1021 ttaaatatgc ttcatcaaat tccaaatatt agtgtctata agcctgaagg agctttttat
     1081 ctttttgtaa atactcaaaa aattgaaaaa gattctatga aattttgcca aaaattacta
     1141 gaacaagaaa aagttgctgt agttccaggt atcggttttg gcatggatgg atattttaga
     1201 ctttcttatg ctacaagcga tgaacttatc aaaaaaggca tagaaagaat agcaaatttt
     1261 attaaaaatt ataaataatt ctaggtttaa aacctagaat tgctaacttt gttaggcaat
     1321 caaataaaat tcaaatgacc caaatttaaa ctttctcaaa cccaaatttc aaaataaaac
     1381 caaaaaatca aggtttttta agcactgcat ttactctttg gactttatct agtttattta
     1441 aactaagtct tatcacagaa tcttctaatc ctcctaaaga atgaggcaca tttgcttcta
     1501 agcttatcat atctaaagta ttgaattcaa atttctcatt ttctacttca aaccaaattt
     1561 taccacttaa aacttgcacg cggatagcaa agggtgcttt atgctctttc atcacgctat
     1621 ctttagcaag taaaatttga atttccttgc tgtgctcatc atcgattaaa acattgattt
     1681 ttacttcttt ggggctaaaa tccgctttat tccattgagt gattttcatc aaatctcctt
     1741 tttaatttta taagattgta acaaaaatca aaacacagac tataaacttg tgttaatttt
     1801 atccttcttt ccaccaaaaa tcttgctcaa actcacttcc cacctcataa gcttcgccca
     1861 tttttggtgt aatcaaaggc aaatttgaat tctcataaag atattctacc actccattcc
     1921 acgcatgagt tcctgctaaa aaccttcccc aatgtatagg cattaaagct tttgcattca
     1981 aatcttttgt ttcttttaaa atttgatcag gaaaagaatg cgaaaaaggc caagcggcat
     2041 taaattgacc gctttcaaga caaactaaat caaaaccacc aaaataagcc ccgatttttt
     2101 taaaatgcgt aaaatatcct ccatcgccac taaaaaacac ccttttgtcc gcgcttaaaa
     2161 attccatcac aaaagaagcc caaagagttt tatttaaccc atcgcccctg cttgaactat
     2221 gctgcgcagg cgttgcaaca atccttaaat catcaaattc caccccactc caccaatcaa
     2281 gctctatgat ttttttctca ctcactccat aactttttag ataatttcct acttttaaag
     2341 gcgcgataaa aaatttagcc ctatctttta aagttttcac gcttttttca tctaaatgat
     2401 caaaatgaga atgagtgata atcacggcaa aaatttcatc aaaatcattg gcattataaa
     2461 caggtgcatt tttaaaagct ttattaataa aagaacaagg tgaagcgtga gtgttaaaga
     2521 taggatcgat taaaatttta tagtttttat aactcacaaa aagcgatgaa tgtccaagcc
     2581 aagtgatgtg cggagtacga aaatacttta aatttggctt aaaaaaagga agtttaaaag
     2641 tcgccttagc atttttaggg taaagataat aatacctcaa aacttcccta aaagacactt
     2701 taaaagcatt atgtgtttgg ggattttcat taagaaaaat ttcatatttt ttaccctgca
     2761 cttttttagc tttttggcgt tctttactcg aaagatcaaa ggttttaaat gacaaattca
     2821 attttttcct tttttatgtt tattaaaatt atatccaaga aatttttaga ttaattttat
     2881 tttacacaag tttttggttt acttgtgtta aaatgtccaa atcaaatatt ggataaaatg
     2941 atgtaaaaat aaaatttata taaactagac aaaatacttc aagaaattga ttttatattt
     3001 aaacaaacca aaggcgagct tatgcaagct ttaaaaaatg aaatcaaaca aaaagctatt
     3061 ttcatgtcac taatcaacat taaagaaacg ataaaaaata tccaagatag tgcagatgct
     3121 gaagttatgg taattttttg tgaagaagat atgaaaagac tctcaaaaag tagaaatatt
     3181 gcagcacata atagtagcca tggatttaaa tatcgtaaca aatcttattc gttacgatct
     3241 agcaagactt aaacaaagta ttgttaattt taaaaataat ccaaacaatt tacattttat
     3301 tccaaaagaa gaaaatgtca aaaaaaagaa tactaaaacc actagaagta ttaattattt
     3361 ttttatttgc atgcatttta tcttgtatta tatttattac ctttttttac ttaacaagcc
     3421 ctccaaaagc ataagacaag aaaatttttc atataacact ttcatacaaa ttatttttat
     3481 tcattagatc cttttattct taacttacca caagctggca gacaaaaata tacacactgc
     3541 accattgatt tagaattaat aaaagaaatt tctttagaag attttacaaa aatttcaccc
     3601 gttattagag atactattat tcaaaccatt ctagcaaaag aaatacaaga aattgaattc
     3661 tctaatttca aactagaact tcaaagagaa ttggttaaaa aaattaatga aaaattaggc
     3721 aataagctga ttaaagaatt atattttaga gattttatca tctcttgaaa atttttataa
     3781 aattttcaag ccttttaaaa aggcttgatt aaagatctta gagagtttta ttcgacttca
     3841 gcgtcgatta catcatcgtc ttttttcttt ttatcatttg ctgcatttgg ctcatctttt
     3901 ttatacatat tttcagccaa tttatgagaa acctcgctta aagctttcat tttagcttcg
     3961 atttcttctt tacttgcatt ttgatttttc aaagtctcac gcaaatcatc aagagctttt
     4021 tggatatttt ctttatcgct atcagctact ttttctccaa gctcatttag agatttttcc
     4081 acttgatgcg ccaagctatc agctgcattt ctagcatcta cagcttcttt gcgttttttg
     4141 tcttcttctt tgtgaagttc agcatctttt accatgttat taatctcttc ctcgctaagt
     4201 ccacttgaac ctgtgatttt gatctcttgt gctttacctg ttgctttatc ttttgcagaa
     4261 acagttaaaa taccatttgc atcgatgtca aaagttactt cgatttgtgg cataccgcgt
     4321 ggtgctggtg gaattccttc aaggttgaaa tttcctaaag atttattatc acgactaaat
     4381 tctctttccc cttgtaaaac attgatagtt acagcacttt gattatcttc tgcagttgag
     4441 aaaacttgct cttttttggt tggtatagtt gtaccttttt cgatgatttt agtcatcaca
     4501 ccgcctaaag tttcgatacc taaagaaagt ggagttacat caagtaaaag tacatctttt
     4561 acatcacctt ttataactgc accttgaatc gccgcaccga tagccacaac ttcatcagga
     4621 tttacagatt tgttaagttc ttttccaaaa gcttttttaa cctcttcttg cactaaagga
     4681 acacgagtag aaccccctac cataacgatt tctttaattt catttttatc aagccctgca
     4741 tcttttacca cttcattgat cttagtgata gtttcagcta ctaaagaatc aatcatacct
     4801 tcaaatttag ctctagtaag ttttttaacc aagtgttttg ggccactcgc atcagctgtg
     4861 ataaatggta aattaatctc tgtttcatta gctgaactta gctctttttt agcattttct
     4921 gcagcttctt ttaagcgttg taaagccata acatcatttt taagatctat acctgtttca
     4981 tctttaaatt cacttgctag aaaatcgata agcttgttat caaaatcatc accacctaag
     5041 aaagcattac cacctgttgc taaaacttct actacattat cccctgtttc aagcacggta
     5101 acatcaaagg ttcccccacc tagatcgtaa actacgattt tttcactatc ttttttatca
     5161 agcccataag ctaaagctgc tgaagtaggc tcgttgataa ttcttaatac attaagtcct
     5221 gcgatagtcc ctgcttcttt cgttgctttt ctttgtgcat cattaaaata cgcaggcaca
     5281 gtaatcaccg catcagtaac actttcaccc aaaaaagctt ctgcatcttc ttttaatttc
     5341 atcaaaactt ttgctgaaat ttcttgtggg gtgtaaattt tacctgcgat ttctatcgcg
     5401 catgcaccat ttctttcggt gatgtggtaa ggaagtctat ttttggcttc tttagccgca
     5461 tcttcattga tcatcaaacc cataattctt ttgatagaat aaatagtttt ttcagggttt
     5521 gttaccgctt ggcgttttgc gctatcgcct actaaaactt cacctttatc tgtaaaagca
     5581 actactgaag gagttgtgtt ttttccttct ttgtttggga ttactttact ctcgccgcgt
     5641 tcatacacag caacacaaga attggttgtt cctaaatcta tacctataac tttactcatt
     5701 ttttatcctt tttattaaaa tttattttgc tacactaact ttggttgggc ggatcacgcg
     5761 atcggctatt ttataacctt tttgaagcac ttgaaccact tcaccacttt gatgattttc
     5821 actatctaca tgaaacatcg cttcgtgtaa attaggatca aactcttttt catctttgat
     5881 aagagccact ccatgttttt caagtttttt aagaaataaa tctaaagtgt tttgcactcc
     5941 ttctttgatt tttaagctaa tttcatcttg gcattcgaca ttgatagctg cttctaaagc
     6001 atctaaaaca tcaagcaaat cctttgcaaa gctttcattt gcataagcca tagcacttag
     6061 cttttctttt tccattcttt ttttaatatt ttcaaattca gcgtttgcac gcatatattt
     6121 gtcttttaat tcatcatagt ctttttgcaa tttgttttgc tcaacatctt cgatattttg
     6181 caaattctca tcttgcaaat gttcagaatt ttctgcgttt tcattttcaa tttcttgctt
     6241 ttgttcgctc atgccgcctc ctttatgtat tgtaatatct ttttataatc cgtataaaca
     6301 ctacctgcta agataatatt tacatcctcg cccaaaaact gcgcatccac cttaagcccc
     6361 ataaaaccct ctttaaataa gggttcaaat tcaagacttt ctttaaaatg acggtgaatt
     6421 tgacaatcta agagcttaac aaattcatca ttttgataaa tttgataagc tctttcttca
     6481 ttgcttctat agcaaatcaa attttgtctt aagctagcta ttttttctac aagatctata
     6541 aaatgaactc tcaaagctat tttttctata ctagaaagat caagtcctat aagactttgt
     6601 aaaaaattcc acgcttcttt ttcatatttt aaaacgagct cttcttcttt aaaatcaagt
     6661 actataaact tagcatttaa atcaagtact tctttaagta ctaaacttct acctccataa
     6721 acaagacaat aaatttcaaa ttccttgctt agttccttta aaaagctttc atttttgata
     6781 tgaatgtttt tatcttgctc tttttcccaa aaattttgcc aataattttg catcgttaaa
     6841 atagtaggaa ttctaccgct acttatatga agctgagtga tcaaaccctc atcgctaagt
     6901 cttttaagat aaacgcgtat agtcgaagca ggtatgcaaa ggtttgaatt taattcatta
     6961 gaaccaatag gtgcattatc caaaagataa gtttgaataa tagactctaa aatcaaatcc
     7021 tttttatctc gacttttcat catattttcc ttcatatcta gcactctatt ttttgattgc
     7081 tagatatatt atacaacatt gagtgttatt ttgtcaagta taaatataaa aaaatatact
     7141 taattttatt tagtcaatat gactaaagtt ttattagtta cttttttata aggataagct
     7201 atcttttaag attgaaaatg caatgataaa aataagatga aaattttaaa ttgaattgat
     7261 tgtctagttt tttaaaggta taagatatta aaataaaaaa ccaaagaagc ctttgaaagc
     7321 tctttggttc ttctatcaaa gcttaaaagt taccattgat agaaatatac attcttcttc
     7381 cttcttctat gcggttatag gtatttaccc aagtgctacc actcccactt gcataagatt
     7441 cccagccatt tgtaaagctt ttgtcaaaaa gattataaat agctgcattg atactccatt
     7501 gtttgttgat atcataacgc acacccatgg aagctaaaaa gatatccttg taatattctc
     7561 tattgatatt agtatcaccc atatagcgat ctatttgcca ctcgcctttt atccaaggag
     7621 tgaatttatt atagaagctg tattcggttt ttaacatgat attgtgtttt aaactatctt
     7681 gttcaggttt acctatcaca cttctatctt gtgcttcttt aacttcagta tcaagataag
     7741 tataagcaaa atttacattt aaattatcaa gagggcttat ccctgctcca agttctacac
     7801 ctttgtattc aaccttgcca tgattgattg ctctagaaca tctatcagca tcacaagtgc
     7861 caatacctgg gattggttcg ctattattat aactttgact tgaaatttta tctttaaaat
     7921 tcgttaaaaa acctgttgct gaaacataaa ataaatcatt attgtaaata gctgctattt
     7981 catagtttaa agatgtctct tcttttaaat caggatttcc atatgtagga aatctgcctt
     8041 ggccactata actgtaagtt ccatttatca aacggtttgc ataaggggtt ctaaagcctg
     8101 tagatacacc gccttttaaa gtaagctcat tagtaggatt ataaaccaca taagctcttg
     8161 gcgaaacatt gtttccaaaa atttcatgat gattatatct tgctccaaaa gtaagtctta
     8221 aatcatcttt tatactatac tcatcctctg caaatattgc caataaatac tgatcaaaat
     8281 tggtcggatt agctatttta tcttgcattt tttcaagcct atattcacca cctgcgctta
     8341 aaatatgact ttgtcccaaa ggaatgacag acttagtatc taagataata tcttctgcga
     8401 ctatatctct attttctccc aaaaacggct gtgtagattg ccctacgact tcgcggccat
     8461 cattgctcac tctattatat tgcaaaccag aagtgataga aaaattttca taaataccct
     8521 catgacttaa ataagtcaca aatttatcaa cttccataat atctgcataa ccacccgtta
     8581 agctacctgg tgttctacct ggacttgtaa tagttcctaa ttgaccttgt ttattatcgt
     8641 aatgatttct tgaaaaatct atatcaaata taaaagtatt ataatcatta gctaaataac
     8701 taattcttgt tcctatgttg aaattatttg cctttgtagg actttgagct tgatcccctt
     8761 gaactctttg tccacttcca tttgtaaatt caacattaga ttgctgtctg taaaattctc
     8821 taaatcgaag tgttagaccc aatttgtcat tcatcaaagg accactagaa taaatactcg
     8881 ttccataagt attaccccaa tctttatttt catttaaaag agcatccaaa cttacagaag
     8941 tttcccattt atcacttact tttttggtaa tgatatttac caccccgcct aaagcttcag
     9001 agccatataa agtactcata ggacctttta taacttctat tctttctatg ctagaaattg
     9061 gaggtaataa agaatttgaa atttcattaa agccattagg accaacttcc ccgccaatac
     9121 cctgacggcg tccatcaatc aaaaccaaag tatatcccgt aatacctctc atggtaatat
     9181 tataagaacc tgtttttccc ttgctagcat ataaatcaac acctgggatg tctgcaatag
     9241 cttctgcaat atctctataa ggcttacttt gtaattcttt tttactgata acattgatag
     9301 tagcaggagc ttctttaata tcttgggtaa agccagaagc actaacgatt gagctatcta
     9361 gttctacatt ttgcgatata gcattggagc ttaagagacc aatggcgcaa actgatagac
     9421 atattttttt catttttctc ctt
//
LOCUS       DBBXOW010000067         9231 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.068, whole genome shotgun sequence.
ACCESSION   DBBXOW010000067 DBBXOW010000000
VERSION     DBBXOW010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9231
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.068"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..410
                     /locus_tag="ACJE1S_001547"
     CDS             <1..410
                     /locus_tag="ACJE1S_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HGG0807077.1"
                     /translation="LIIDKILNNTKTIAIVGLSPDESKPSFMIGQFLQENHYKIYPIY
                     PKCDEILGERVYRSLDDIDEKIDLVLMFRKGEFASSLLPSIIRKGIQNFWLQLGICNN
                     EVAKECENLKINFIQDKCIMRELPLYQDRISKC"
     gene            404..1615
                     /gene="ilvA"
                     /locus_tag="ACJE1S_001548"
     CDS             404..1615
                     /gene="ilvA"
                     /locus_tag="ACJE1S_001548"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HGG0807078.1"
                     /translation="MLELNKIYQAKQKIADFVSKTPFIHSSFLSELCKSEVYLKNENL
                     QITGAYKIRGAYNKIANLDPEAKKAGVIAASAGNHAQGVAISAKKFDTKAIIVMPEST
                     PLLKVSATKSLGAEVILKGDNFDEAYAFATNYAKENGLSFIHPFEDELVMAGQGTLML
                     EMLDDVSDLDTIIAPVGGGGLISGIASAAKQINPNIKIIAVGAKGAPAMHDSFKAKEV
                     KNSKSVRTIADGIAVRDANPINLGIILECVDEFVQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKIDIKDSKKIGVVLSGGNIDVQMLNIIIEKGLFKAYRKMQINVTLI
                     DKPGALLNLTDSLKSANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEVRNIL
                     KDKGFDFYETF"
     gene            complement(1612..2337)
                     /gene="truA"
                     /locus_tag="ACJE1S_001549"
     CDS             complement(1612..2337)
                     /gene="truA"
                     /locus_tag="ACJE1S_001549"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HGG0807079.1"
                     /translation="MMKLKIIFSYDGSKFLGSAIQPHKKSVQDALQDALSHLGIFSSV
                     LMASRTDKGVHASYAVACVECGEHFRDLNYLKKQINKFSHPFIHVKNLKIMPSNFEVR
                     YDVKSREYRYIFYHGVYNPFLASYVHFYPFIDVLKADLVLQNFVGIKDFKFFCKSGGD
                     NKTTIREIFLAKAYSYKDFTIFRFKANGFLRAQIRLMVASVLKVLENKMSIEELKEQI
                     EAKKQYNHFLAPPCGLYLSRISY"
     gene            complement(2334..3359)
                     /locus_tag="ACJE1S_001550"
     CDS             complement(2334..3359)
                     /locus_tag="ACJE1S_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HGG0807080.1"
                     /translation="MKLALRYVLNQFLSTNLSIFFVLFTIVSMVFFIQLAKLTSSIEI
                     NFTDLLKLYGFMLPRILIFTLPIAFFIALTLALFRLSRENESIVLFTLGFSPKILAKF
                     FLKIAALVSALMLIIALVMIPIVFELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFI
                     EKQESDRYENIIMYHPKRNIEDKEQLIIAKEATAQRNEDSFAFKLSNGKMYNFENGQT
                     LFIGNFDKLIVNTQFNDQNLQTKKFYEYWNDLNTNPKRAKEFVIYVTIALFPLASTLF
                     ALSFGIVTYRYEKGFIYFGMFGVIAVYFGLLSSFSQPPILACIGIFALSFIASIVCFK
                     KMILSRY"
     gene            complement(3356..4135)
                     /locus_tag="ACJE1S_001551"
     CDS             complement(3356..4135)
                     /locus_tag="ACJE1S_001551"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HGG0807081.1"
                     /translation="MENNPIAFLILAILGASLGSFCMSLTMRFCENKPLLSLRSYCFS
                     CYQKLKPLELIPIFSYIFLRFKCKTCHIKIPFSVFLAEVLGMIFAWIAYLLSQNIGEF
                     IHLLIFLFVLFALSCIDLKFQAVPQKLLWLIFFIAFSFAFNSNEFAYFFIFENFQNGF
                     MVQAFIFAGFLFLLKNFIAFLKNFRTKDMQENLGDADIIILASMAGVFGFKSAFIILF
                     LASLLSLPFFIHNKNTKLAFLPFINAAFVIYLIYLIVQELI"
     gene            complement(4125..4793)
                     /gene="uppS"
                     /locus_tag="ACJE1S_001552"
     CDS             complement(4125..4793)
                     /gene="uppS"
                     /locus_tag="ACJE1S_001552"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HGG0807082.1"
                     /translation="MNELKHLAVVMDGNRRWAKAKGFLAKLGYSQGVKTMQKLMEACV
                     EEGISNLSLFAFSTENWNRPQDEIEFIFELLDRCLDEALKEFEKNNVRLRAIGDLSRL
                     DTHLQEKIALVEEKTKHCDLLCVNLAISYGAKDEIVRSVKRLIEKGLEINEKNISDNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCAYAEIYFSETLFPSLTKREFKKIIKEFRKRER
                     TFGK"
     gene            complement(4796..5413)
                     /locus_tag="ACJE1S_001553"
     CDS             complement(4796..5413)
                     /locus_tag="ACJE1S_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807083.1"
                     /translation="MNMINSTLPIQMKVLAKSGYAHYTLLLNHRKIQTKSMIELEIGA
                     EYLAELYIEKGGAIAFKHLSKRPDFHPFEEGLSLMVEILEGRIDYKKYIISNLLECKD
                     KNKYHILKEMLFASFENIYHIPFIFKGKACLFQMKKRVKFLEIYLYFSVFGALKILID
                     EGGISIFTPFFKVQKFLNEHLQFNVLQDKNIQPLFVFKKLFDFKG"
     gene            complement(5410..6564)
                     /gene="coaBC"
                     /locus_tag="ACJE1S_001554"
     CDS             complement(5410..6564)
                     /gene="coaBC"
                     /locus_tag="ACJE1S_001554"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HGG0807084.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALVDEVLCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGIGAL
                     AEVKDIFNISKRELFKQSFWCDKEVVISGGGTKEKIDNVRCVSNFSSGKMAKAIADAF
                     YFLGAKVTLLSSVYFDTPYSLKSFESSRELKELLEQNSNKDYLIMAAAVSDFIPEFKK
                     GKIKKNEHLKGLNLHLRLNEDLLKNLNFKGKKIGFKMEFDVQNALENAKKSLNDKKLD
                     MVCLNILEEENYFGSSKNEIHFITVNKIEKSGLKSKEDLAFDLVSWCEKI"
     gene            complement(6561..7850)
                     /gene="glmU"
                     /locus_tag="ACJE1S_001555"
     CDS             complement(6561..7850)
                     /gene="glmU"
                     /locus_tag="ACJE1S_001555"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HGG0807085.1"
                     /translation="MKTSILILAAGLGTRMKSQKPKVLQELCQKSMILHILEKAFAIS
                     EDVSVVLSHQKERVEKEILKHFPKTQILEQDLINFPGTAGALKEFRPKNEKVLILCGD
                     MPLVEQTSLEALLSNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVGEDEFM
                     GINDKFELSIAENFMQEKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAGHKMIKDYYYKKFQK"
     gene            8000..8734
                     /gene="fliP"
                     /locus_tag="ACJE1S_001556"
     CDS             8000..8734
                     /gene="fliP"
                     /locus_tag="ACJE1S_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807464.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HGG0807086.1"
                     /translation="MLTLLFISGFFSVIFAAEATIPTVNLSLSAPDTPNQLVTTLNIV
                     IVLTILALAPSIIFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEQIGYEEAFARGVKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPVMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            complement(8731..8955)
                     /locus_tag="ACJE1S_001557"
     CDS             complement(8731..8955)
                     /locus_tag="ACJE1S_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807087.1"
                     /translation="MLEFIFTLILDFTFYSIKTLEKVFLGRTALVILFVVFIALFCVK
                     GLFLYILLALELFLLLYLFLGILFLRFYKS"
     gene            complement(8975..9208)
                     /locus_tag="ACJE1S_001558"
     CDS             complement(8975..9208)
                     /locus_tag="ACJE1S_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807088.1"
                     /translation="MKKVAFFLLFLFLSCTVLNAAREYCKYAYQEDRAIPLILNYGIR
                     LGVVGAGVANVPAPGGSTYNSKIDMMAARCHQA"
BASE COUNT         3268 a         1633 c         1257 g         3073 t
ORIGIN      
        1 atttaatcat agataaaata ctcaacaaca caaaaaccat tgccatagta ggacttagcc
       61 ccgatgaaag caagccttct tttatgatag gacaattttt acaagaaaat cattataaaa
      121 tttatcctat atatcctaaa tgtgatgaaa ttttaggaga acgcgtttat cgaagcttag
      181 atgatatcga tgaaaaaata gatcttgttt taatgtttcg caagggcgaa tttgcctctt
      241 cattactccc aagtattatc cgtaaaggaa ttcaaaattt ttggctgcag cttggaattt
      301 gcaacaatga agttgctaaa gaatgcgaaa atttaaagat taattttata caggataaat
      361 gcattatgcg tgaattgcca ctttatcaag ataggataag caaatgttag aactgaacaa
      421 aatttatcaa gccaaacaaa aaattgctga ttttgtaagc aaaactcctt ttatacactc
      481 ttctttttta agcgaacttt gcaaaagtga agtgtattta aaaaatgaaa atttgcaaat
      541 tacaggagct tataaaattc gcggtgcata taacaaaata gctaatttag acccagaagc
      601 taaaaaagca ggagttatag ctgctagtgc tggaaatcac gctcaaggtg ttgccataag
      661 tgcaaagaaa tttgacacaa aagctataat cgtgatgcca gaatccaccc ctctcttaaa
      721 agtttctgct accaaaagct tgggtgcaga agttatttta aagggtgata attttgacga
      781 agcttatgct tttgcaacaa actatgcgaa agaaaatgga ttaagtttta ttcatccttt
      841 tgaagatgaa cttgtaatgg caggacaagg cacacttatg cttgaaatgc ttgatgatgt
      901 aagcgatctt gataccatca tagctcctgt aggcggtggt ggacttatta gcggtatagc
      961 aagcgctgca aagcagatta atcccaatat caaaattatt gcagtaggtg ctaaaggagc
     1021 tcctgcaatg catgatagct ttaaagcaaa agaggttaaa aactctaaaa gtgtccgtac
     1081 tatagcagac ggtattgctg tgcgcgatgc taatcctatt aacctaggta tcatccttga
     1141 atgcgtggat gaatttgttc aagtagacga tgaagaaatc gctaatgcgg tattgttttt
     1201 gcttgaaaaa cataaaatta tagttgaagg cgcaggtgct gcaagcgtag ccgccctact
     1261 tcatcaaaaa atagatataa aagattctaa aaaaatcggc gttgttttaa gtggcggcaa
     1321 tatcgatgtg caaatgctaa atatcatcat agaaaagggt ctttttaaag cttatcgtaa
     1381 aatgcaaatc aatgttactt taatcgataa accaggagcc ctacttaatc ttacagatag
     1441 cttaaaatca gccaatgcaa acatagtcaa aattgattat gatagatttt caacaaagct
     1501 tgattatggc gatgctatga tttctattac cttagaaact aaaggcaaag aacatcaaga
     1561 agaagttaga aatatcttaa aagataaagg ttttgatttt tacgaaactt tctaataaga
     1621 aattctactc agataaagtc cacaaggcgg ggctaaaaaa tgattgtatt gttttttagc
     1681 ttcgatttgc tcttttagct cttctatact catcttattt tctaaaactt ttaaaacact
     1741 cgcaaccatt agtcttattt gcgcccttaa aaaaccatta gccttaaaac gaaaaatggt
     1801 aaaatcctta taagaatacg ctttagctaa aaatatttct ctgatagtcg ttttattatc
     1861 tcctccgctc ttgcaaaaga atttaaaatc cttaatacct acaaaatttt gcaaaacaag
     1921 atcagccttt aaaacatcaa taaaaggata aaaatgaaca taagaagcta aaaaaggatt
     1981 ataaaccccg tgataaaaaa tatagcgata ttctctactt tttacatcgt atcttacttc
     2041 aaaatttgaa ggcatgattt ttaaattttt aacatgtata aaaggatgag aaaatttatt
     2101 gatttgtttt ttaagatagt ttaaatccct aaaatgctcc ccgcattcca cgcaagcaac
     2161 agcatagctt gcatgcaccc ctttatctgt gcgagaagcc atcaaaacag aggaaaaaat
     2221 tccaagatga cttaaggcat cttgcaaggc atcttgaacg ctttttttgt gaggttggat
     2281 agctgaacct aaaaatttcg atccatcata ggaaaaaata atttttaatt tcatcaataa
     2341 cgactcaaaa tcatcttttt aaaacaaaca atagacgcaa taaaacttaa agcaaatatt
     2401 ccaatacaag ctaaaatagg aggctgtgaa aaagaactta aaagcccaaa atacacagca
     2461 ataaccccaa acatcccaaa ataaataaaa cctttttcat aacgataagt tactatacca
     2521 aaagaaaggg caaaaagcgt acttgcgagt ggaaataatg ctatggttac atagattaca
     2581 aattctttcg cgcgtttggg atttgtattt aaatcattcc aatactcata aaatttttta
     2641 gtttgtaaat tttgatcatt aaattgtgta ttgactataa gcttatcaaa atttccaata
     2701 aaaagcgttt ggccattttc aaaattatac attttgccat tagaaagctt aaaagcaaag
     2761 ctgtcttcat ttctttgtgc tgttgcttct tttgcgataa tcaattgctc tttgtcttct
     2821 atattgcgtt ttggatgata catgatgata ttttcatatc tgtcactttc ttgcttctca
     2881 ataaaaatca tccattcaag aaatctttgt ccaaattcac ccgttttata attaaattta
     2941 acctgagttt ttttaaaatt aacaaaatta tcttgcaatt caaacactat aggtatcata
     3001 accaaagcta taattaacat caatgcactt actaaagcgg cgatttttaa aaaaaactta
     3061 gctaaaattt taggtgaaaa tcccaaggta aataacacta tgctttcatt ctctctagaa
     3121 agcctaaaaa gagccaaagt aagagcgata aaaaaagcta taggcagggt aaaaataaga
     3181 attctaggca gcataaagcc gtataattta agcaaatctg taaaattaat ctctatacta
     3241 gaagtaagct tagcaagttg tataaaaaaa accatagaaa ctatagtaaa aagcacaaaa
     3301 aaaatcgata aatttgtact taaaaattga tttaaaacat atcttaaagc aagtttcata
     3361 ttaattcctg aacaatcaaa tatatcaaat atatcacaaa agcagcattg ataaagggta
     3421 aaaatgctag ttttgtattt ttattatgga taaaaaaggg caaagacaat aacgaagcaa
     3481 gaaaaagaat tataaaagca ctcttaaaac caaatacccc tgccatacta gcaaggataa
     3541 taatatccgc atcacctaaa ttttcttgca tgtcttttgt tctaaaattt tttaaaaatg
     3601 ctataaaatt tttaagtaaa aacaaaaaac cagcaaaaat aaaagcttga accataaatc
     3661 cattttgaaa attttcaaat ataaaaaaat acgcaaattc attgctatta aaagcaaaag
     3721 aaaatgcaat aaaaaaaatc aaccaaagca atttttgagg cacagcttga aattttaaat
     3781 ctatgcaaga gagtgcaaat aaaacaaata gaaaaatcag taaatggata aattccccta
     3841 tattttggct tagcaaataa gcaatccatg caaaaatcat ccccaaaact tcagccaaaa
     3901 aaacagaaaa aggaatttta atatgacaag ttttgcactt aaagcgaaga aaaatataag
     3961 aaaaaatggg tattaattcc aaaggcttaa gtttttgata gcaagaaaag caataagaac
     4021 gcaagcttaa taagggcttg ttttcacaaa aacgcattgt taagctcata caaaatgaac
     4081 ccaagctcgc tcctaaaata gctaaaatca aaaaagctat gggattattt tccaaaagtt
     4141 ctctctcttt ttctaaattc ttttataatt tttttaaatt ctctttttgt aagagaagga
     4201 aataaggttt cgctaaaata aatttctgca taagcacatt gccaaagcaa gaaattagac
     4261 aatcttttag catttcccac acgaagcatc aaatccacat ccaaaggcaa atctaaatta
     4321 tcgcttatgt ttttttcatt gatttccaag cctttttcaa tcaagcgttt aaccgaacgc
     4381 acgatttcat cttttgctcc ataactgata gctaaattca cacaaagcaa atcacagtgc
     4441 ttggtttttt cttccacaag ggctattttt tcttgtaaat gtgtatcaag tcttgataaa
     4501 tccccgatag ctcttaatct tacattgttt ttttcaaatt cttttaaggc ttcgtccaaa
     4561 caacgatcca aaagctcaaa aataaattca atctcatctt gaggtctgtt ccaattttcc
     4621 gtgctaaaag caaaaagact taaatttgaa attccctcct ctacacaagc ttccatcagc
     4681 ttttgcatgg ttttaacacc ttgagaatat ccaagcttag ctaaaaaacc ttttgcctta
     4741 gcccaacgcc tattgccatc cattacaaca gcaagatgtt ttaattcatt cattatcacc
     4801 ctttaaaatc aaataatttt ttaaatacaa ataaaggttg tatattttta tcttgcaaaa
     4861 cattaaattg caagtgctcg tttaaaaatt tttgcacctt aaaaaagggg gtaaatatcg
     4921 aaattccacc ctcatcgatc agaattttca aagctccaaa aacgctaaaa taaagataaa
     4981 tttctaaaaa tttaaccctt tttttcatct gaaacaaaca agccttaccc ttaaagataa
     5041 aagggatatg ataaatattt tcaaaacttg caaaaagcat ttcttttaaa atatgatatt
     5101 tatttttatc tttgcactct aaaagatttg aaataatata ttttttataa tcaatcctac
     5161 cctctaaaat ttcaaccatc aaagataatc cctcttcaaa gggatgaaaa tcaggccttt
     5221 tagataaatg cttaaatgcg atcgcgccgc ctttttctat ataaagctcg gctaaatact
     5281 cagctccaat ttctaattct atcatgcttt tggtttgaat ttttctatga ttgagcaaaa
     5341 gtgtgtagtg tgcatagcct gattttgcta aaactttcat ttgtataggt agggttgagt
     5401 ttatcatatt catatttttt cacaccaaga aaccaaatca aaagccaaat cttccttgct
     5461 ttttaaacca cttttttcta tcttatttac tgtaataaaa tgaatttcat tcttagaact
     5521 tccaaaataa ttttcctctt ctaagatatt taaacaaacc atatcaagtt ttttatcatt
     5581 aagcgatttt ttcgcatttt ctaaagcatt ttgaacgtca aattccatct taaagcctat
     5641 ttttttacct ttaaaattta aatttttaag caaatcctca tttaatctta aatgcaaatt
     5701 taaacccttt aaatgctcat tttttttgat tttgcctttt ttaaattcag gtataaagtc
     5761 acttacagct gccgccatga ttaaataatc tttgtttgaa ttttgctcta gcaattcttt
     5821 taattctcgc gagctttcaa aactcttaag agaataagga gtatcaaaat aaaccgaact
     5881 caaaagcgtt actttagccc ccaaaaaata aaacgcatca gcgattgcct ttgccatttt
     5941 tccacttgaa aaattactca cacaacgcac attatcaatc ttttcttttg tccccccacc
     6001 actaataaca acttctttat cacaccaaaa tgattgcttg aaaagctctc ttttgcttat
     6061 attaaagata tcttttactt cagccaaagc tccgatacct tcatctttac aagctaaaac
     6121 tttacaaata ggctctataa tcaaagcttt attttcttta agtatcttta aagaattttg
     6181 cgtgctaaaa tgatgaaaca tatttgtatt tgccgcagga gctatgataa gaggtttatt
     6241 tgctgcgatt aaggtttgga taaaaagatt atccgctata ccaaaagcaa gtttattgat
     6301 agaattaaca cttgcagggg caaacaaaac aaggtctaca tccttgctaa aagctatgtg
     6361 attgtttgaa ttttgccaac tttcattttc ctcacataaa acttcatcaa ccaaggcttc
     6421 aaaactcatt ttgctagcaa attttaacaa accattagaa agcaaaactt ttaccctaaa
     6481 gccttctttt ttaaacaaag aaataagctc ataagattta taaaaagcta tactaccgct
     6541 aatggctaaa agtatggttt tcatttttga aatttcttat aataataatc ttttatcatt
     6601 ttatgccctg ctctattgat aaacaaagca cccttttcta cattgacact tactgtgctt
     6661 cctgctgcta tgattacttc atcttcgatt tttacaggtg cgataaattg cgtatcagaa
     6721 cctacaaaaa cattttttcc tatgatggtt ttatgctttt ttaccccatc ataattacaa
     6781 gtgatagtcc cacagcctat attggttcca ctatctatct cacaatctcc taaatagctt
     6841 aaatgccctg cttttacggt atttaacttt gcatttttgc attctacaaa atttcctata
     6901 tgagtgtttt ttaactcaca atttggacgc aaatgtgcca aaggccctac atcgctattt
     6961 tctacgatgg aattttctat cacgcttgaa cttttaatga tagagtttat aatcttactt
     7021 ttgccctcta tccttacatt ttcatatact tcacattcac ctacaaattc aacatctgca
     7081 cctataaaag tgctttgcgg taaatgaaaa atcacaccct gttgcatcca gtatttttta
     7141 attttttctt gcatgaaatt ttcagctata ctgagttcaa atttatcatt aatccccata
     7201 aattcatctt cacctacaaa aactgcttta atcatcacat ctttttcttt tgctagtttt
     7261 acaatgtcgg ttaaataata ctcttttgcc gcattattgt tatcaatcaa aggtaaaagc
     7321 tcttttaaaa gtctcgagtc aatcacataa accccagcat tgcaagtatt tatctctttt
     7381 tcttgcgtat ttgcatcttt aaattcaaca attttttcaa cgctatcgtt ttttatcacc
     7441 accctaccat aacttttagg atctcttgct ttaaaaactg ctagatttaa ttttgcatta
     7501 ttactcaaca aagcttccaa acttgtttgc tcaaccaaag gcatatcccc gcaaagaatt
     7561 aaaacttttt catttttagg cctaaattcc tttaaagcgc ccgcagtgcc tgggaaattg
     7621 atcaaatctt gttctaaaat ttgcgtttta ggaaaatgtt ttaaaatttc tttttcaacg
     7681 cgttcttttt gatgagataa aaccacgctc acatcttcac ttatagcaaa agctttctct
     7741 aagatatgta aaatcatgct tttttgacac agctcttgca atacctttgg tttttgtgat
     7801 ttcattcttg ttccaagtcc tgctgctaaa atcaaaatgg aagttttcat tataaaaagc
     7861 cttttgagga taattttatt ttaattttaa cattttaaag ttaaattttt ctctaaatta
     7921 aaacaagtta aactcttttt tagtgagtaa aagttaaaat taagtttcat tttttaatca
     7981 aggtttattt ttgaaaaaaa ttttaacatt attgtttatc agcggttttt ttagcgttat
     8041 tttcgctgcc gaagcaacaa ttcctacagt aaatttaagc ctaagtgctc ctgatactcc
     8101 taatcaactt gttacaacat taaacatagt catagtctta accatacttg cattagctcc
     8161 aagtataatt tttgttatga cttctttttt acgcttgatt gtagtttttt cattcttgcg
     8221 tcaagctatg ggaactcaaa gtatgccgcc taataccatc ttagtaacct tggcattgat
     8281 tttaaccttt tttataatgg agcctgtggc tacaaagtct tataatgaag gcatcaagcc
     8341 ttatttagca gagcaaatag gctatgaaga agcttttgca agaggtgtga aaccttttaa
     8401 agattttatg cttaaaaata cacgcgaaaa agacttagct ttattttacc gcatacgaaa
     8461 cctgcctaat cctaaaacca tagatgatgt tccacttacg gttttagttc ctgcttttat
     8521 gatttcagaa cttaaaactg cttttgagat aggctttttg atttatttgc catttttggt
     8581 tatcgatatg gttgtgagtt cggttttgat ggcgatgggg atgatgatgc ttcctcctgt
     8641 tatgatttca ttgcctttta aacttttgat ttttgtatta gtggatggat ggaatttgct
     8701 agtgcaaagg cttgtggaaa gctttgtaac ctaagattta taaaatctta aaaacaaaat
     8761 tccaagaaaa agatacaaaa gcaaaaataa ttctaaagct aaaagtatat acaaaaacaa
     8821 gcctttaacg caaaaaagag ctataaaaac aacaaaaaga attactaagg ctgttcgccc
     8881 tagaaagact ttttctaggg tcttgataga ataaaaagta aaatctaaaa taagagtaaa
     8941 aataaattct agcattgtaa aatacaccca aaaactaagc ttggtggcat cttgcagcca
     9001 tcatgtcaat ttttgaattg taagtacttc cgcccggtgc aggtacattc gcaaccccag
     9061 cacccactac ccccaatctt attccataat ttaaaattaa aggtatagct ctatcttctt
     9121 gataagcata tttgcaatac tccctagctg cgtttagtac agtgcaagat aaaaacaaaa
     9181 ataacaaaaa aaatgcaact tttttcatta tcttaaatcc ttttatttaa a
//
LOCUS       DBBXOW010000068         8996 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.069, whole genome shotgun sequence.
ACCESSION   DBBXOW010000068 DBBXOW010000000
VERSION     DBBXOW010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8996
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.069"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            100..1395
                     /locus_tag="ACJE1S_001559"
     CDS             100..1395
                     /locus_tag="ACJE1S_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG0807089.1"
                     /translation="MDTINIIILFSLIISIALGYVLKANIGVFAILSAFIGAYLYGIT
                     PEKVINLWNGSLSLFFILLSITYFYGFAIANGTLNNLALKAVYSVRNRPWSIPIALYI
                     TVMVFVGIGPGHYAGFAFMSPLVLYIASKIKMNKILAAIIIYSGSCAGGFNPFTLGGR
                     VTFDLIEKLGYSAEASAIMQLNLGKNMFIAHTLIFIIGYFLLKGYKVKITSQITKPKR
                     LNAAQWKTIFIVCFVFAVIMIPSFFLALNPHDETLKKVTSIFNPVFVSFLGIVLAVIF
                     GIGSEKEAFKNVPWDLIFMIGSLSMLIELSKTTGIMENITTFMSAHGSSSSNWLYYLL
                     GILSSCMSAFASSMGVVMPTFFSIVPSIKALEPSLAFSIIAVFATFTGYSSFSTGGAL
                     VLAGAQDESEKRYLFIRLIILPLILVVFGFVLLFLGILN"
     gene            1406..2236
                     /locus_tag="ACJE1S_001560"
     CDS             1406..2236
                     /locus_tag="ACJE1S_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807090.1"
                     /translation="MSYENFIGKQEKFTENINEKQVQKIVATLQSKQLKNGDALPYLW
                     QWCFFNEALTPDKLGRDGHPKLGLDKNSFFPSFGEVNRMWAGGRFNFIAPLIIGEDAT
                     KITTIKKIQEKQGKSGKLTFVTLEHCYYQKEQLKIEEEQDIVYKQPAPPKLTSDVVAM
                     NADYSEKMQPDSTLLFRYSALTFNGHKIHYDFPYATQVEGYHGLVIHGPLLATYMINC
                     FVKNHPDKQIINYSYRGMHALCVPDSFAVESKIIDNNTAEVWINKNGFVAHSGTIHFK
                     "
     gene            2249..3421
                     /locus_tag="ACJE1S_001561"
     CDS             2249..3421
                     /locus_tag="ACJE1S_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA transferase family protein"
                     /protein_id="HGG0807091.1"
                     /translation="MLPLEGKLVLSIEQAIAAPFCTRQLADLGARVIKIERPEVGDLA
                     RGYDKRVDGIASHFVWVNRSKESLAIDLKDPDGLEFIKTILPKVDIFVQNLAFGASKR
                     LGLDYENLKKYNPKIIVCDISGYGEGGNYGHKKAYDLLIQSESGLVSITGTQDECVKV
                     PISIADISAGMYAYSGILQALLYLEKTGKGSRVEISMLECMAEWMNYPLYYTYKNATP
                     PERKGAFHASITPYGPYKAKDGVVMFGLQNPREWESFCKIVLQDESLIEHEDFKNNTL
                     RTKNASKVKEIIEDAFKNLSAKEVVDRLDEAKIANGNVNELNQVWEHPQLKARNRWRE
                     VDSEVGKIPALLPPATNNNYEARMDKIPALGEHTESILKEFGFSDKINLFKEKKII"
     gene            3431..4264
                     /locus_tag="ACJE1S_001562"
     CDS             3431..4264
                     /locus_tag="ACJE1S_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HGG0807092.1"
                     /translation="MKAKSFLFVPSIFPERFTKALQSGASQIIIDLEDSVEVAKKEVG
                     RKNIVDFSSQCAKNNDKFLIRINETKSKEFQKDLSLISTIKESNGIIGVVLPKAQSYE
                     DIDMLSQFELPILPIIESALGVENLDDIARHPSVLALSFGSLDMTLDLNLQEGEGKNF
                     ILNSIRTQIVLKSTKYNLLSPINGVYPDIKNIDGLKEDLIFAKSMGFGGSLCIHPNQV
                     APINEVFSPSAKQIAWAKEILSLRQNSNDIIFNYNGMMVDLPVIKKAEQILLDSNSNL
                     S"
     gene            4507..6570
                     /locus_tag="ACJE1S_001563"
     CDS             4507..6570
                     /locus_tag="ACJE1S_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HGG0807093.1"
                     /translation="MNAKKLKLSILCFCLMGLGEIKAEEQYQLDDVVVSASGFEQDLV
                     DAPASISVITKEELSKKPIKDIGEAISDIPGVDVTMNKTGTYDFSIRGFGSSYTLVLI
                     DGKRQSVANGFYDNGFGGSESGYLPPASMIERIEVIRGPASTLYGSDAVGGVINIITK
                     KNPNKTEANIEFSTLLQQHSSKYGNAGGFNAYVATPLIEDTLSISARIKYYDKAASDL
                     KWPTPVWSNGTQRPENYQIASHSPGYFTSLGFGSRLNWTVDDSNNVYLDVERYINEIS
                     VNSTSSSAIKSERQLFKDNVVLNHDGNYEFGTTNSYLQYGSTKDKDLHSQIWVGEGKV
                     VLPWNLDKYGNLVSTFGTRIDYETLKNDQESAGSEIRGKNLDQTTVALYGEGEYFISD
                     DLIFTTGLRYIYSDLFDSEVTPRVYLVYHLNDNVAFKGGVAMGYKTPAAKQLTNGYYN
                     YSNNGASFGNPDLKPEESTNYELGVDFRIFDFAHYSITGFITDFKNQISSEELTGMYN
                     GIDCANGVTCERSINLGKTQTRGIELAFNTKPYKGFSVNSSYTFMDNRYKDGQTNWFG
                     GDRIENLPRHIAMLKLNYEQGEFSSYVKARARLDTIARSKGGGSGTLPWQKYKPFYIV
                     DLGVNYKIDKQSSLSFTVQNLFDKDFFDPQVTRWDGANPGGYANRYQDYTEGRSFWLS
                     YKYDF"
     gene            6646..7239
                     /locus_tag="ACJE1S_001564"
     CDS             6646..7239
                     /locus_tag="ACJE1S_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HGG0807094.1"
                     /translation="MIFKNLKELPFCESNYIKPKRFSYESNGKFCTWDFIESKDSVSI
                     LLYHKELKSFIFVRQFRIPLWYHQKQDKNYHKDENMGYTIELCSGLVDKDLPLEQIAK
                     EECIEELGYAPKEFEKVGDFYTGFGSGVSKQSFYFAIVDENDKICDGGGVDDEQIEAV
                     FVKINEYEEFSKKIIHTPLLDFAYLWFLKEKKELCLK"
     gene            complement(7260..8354)
                     /locus_tag="ACJE1S_001565"
     CDS             complement(7260..8354)
                     /locus_tag="ACJE1S_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HGG0807095.1"
                     /translation="MFGSKINHTELQDIKNENQNLTQQLEKIKAENLELKDKISLLEQ
                     EALESKLKTDLLNVLLGGVLKNITIVQSDMLENVNKAEIISNYSKTSLAEMDELNHIA
                     NSINASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISINSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFAKSGQE
                     LADHTSCRLGKWVASTGKERFGDSKSFIKINEPHQKVHENMNSAIRIANTEDVSLSNT
                     QDAIIKKCENAENASLHLFDVFKEMLNEAN"
     gene            complement(8366..8581)
                     /locus_tag="ACJE1S_001566"
     CDS             complement(8366..8581)
                     /locus_tag="ACJE1S_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HGG0807096.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFERHNELDDQIKDAEEGRNLLS
                     DIEISNLKKEKLHIKDQLNQYLANYKK"
     gene            complement(8778..8972)
                     /gene="rpmB"
                     /locus_tag="ACJE1S_001567"
     CDS             complement(8778..8972)
                     /gene="rpmB"
                     /locus_tag="ACJE1S_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HGG0807097.1"
                     /translation="MARICQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
BASE COUNT         3026 a         1221 c         1642 g         3107 t
ORIGIN      
        1 atttttattt gtcaaagatt tattgataag atttaagtat tttttattgg aagttagtgg
       61 aaaattatct taaaattact caagataagg agctaaatga tggatactat taatattatt
      121 attttatttt ccctcataat atcaattgct ttgggctatg ttcttaaagc aaatatcgga
      181 gtcttcgcga tactttcagc ctttattggg gcataccttt acggtataac accagaaaag
      241 gtgattaatc tttggaatgg aagtttaagt ttatttttta tacttctttc tattacttat
      301 ttttatggtt ttgcgattgc aaatggtacg ctaaacaatc tcgcgttaaa agctgtgtat
      361 tctgttagga atagaccttg gagtattcct attgcacttt atattacagt tatggtattt
      421 gtaggaattg gaccaggaca ttatgcaggc tttgctttta tgagtccttt ggttctttat
      481 attgctagca aaatcaaaat gaataagatt ttagcagcta ttattattta ttctggttcc
      541 tgtgcaggtg gatttaatcc ctttaccctt ggtggcagag taacttttga tcttatcgaa
      601 aaacttggtt attcagcaga agcttctgca ataatgcaat taaatttagg taaaaatatg
      661 tttattgcac atactttgat ttttataatc ggatattttt tgctaaaagg ttataaggtg
      721 aaaattactt cgcaaattac aaaaccaaaa agactcaatg ctgcacaatg gaagacgatt
      781 tttattgtgt gttttgtttt tgcggttatt atgatcccat ctttttttct tgctttaaat
      841 cctcatgatg aaacactaaa aaaagtaact tccattttta accctgtttt tgtttcattt
      901 cttggaatcg ttttggcagt aatatttgga attggtagtg aaaaagaagc atttaagaat
      961 gtgccttggg atttgatttt catgattgga tcactttcta tgcttattga gctcagtaaa
     1021 acaacaggca taatggaaaa tatcacaaca tttatgagtg cgcacggttc aagtagcagt
     1081 aattggcttt attatttgct tggaatttta tcttcttgta tgagtgcgtt tgcctcaagc
     1141 atgggggtgg ttatgccaac atttttctct atcgtaccat caatcaaagc acttgagcca
     1201 tcacttgcat tttctataat cgcagtattt gcaacattta ctggatattc aagtttttca
     1261 acaggcggag ccttggtttt ggctggtgca caagatgaaa gtgaaaaacg ctatcttttt
     1321 ataagattga taatattgcc tttaattttg gtagtatttg gttttgtatt attattttta
     1381 ggtattttaa attaaggaga aaaaaatgag ttatgaaaat tttattggaa aacaagaaaa
     1441 atttacagaa aacatcaatg aaaaacaggt gcaaaaaatt gttgcaacgc tacaatctaa
     1501 gcaattaaaa aatggcgatg cccttccata tctttggcaa tggtgctttt ttaatgaagc
     1561 actaactcca gataaattag gcagagatgg ccatcctaaa ctaggactag ataaaaatag
     1621 cttttttcca agctttggtg aagtcaatcg tatgtgggca ggaggtagat ttaactttat
     1681 tgctcctttg attattggag aagatgcaac aaaaataacc acaataaaaa agattcaaga
     1741 aaaacaagga aaaagtggaa aacttacttt tgttacctta gagcactgct attatcaaaa
     1801 agagcagtta aaaatcgagg aagaacagga tattgtttat aaacaaccag cacctccaaa
     1861 gcttacgagc gatgtagttg ctatgaatgc agattattct gaaaaaatgc aacctgattc
     1921 cacgcttttg tttcgctatt ctgctttaac ctttaatggc cataagatcc actatgattt
     1981 tccttatgca acgcaagttg agggttatca tggtttagtt atacatggtc ctttattggc
     2041 aacttatatg attaattgct ttgtaaaaaa tcatcccgat aaacaaatta ttaattatag
     2101 ttatagaggt atgcatgcac tttgtgttcc tgatagtttt gctgtggagt caaaaattat
     2161 tgacaacaat actgctgaag tatggataaa taaaaatgga tttgtggcac attctggcac
     2221 tattcatttt aaataaaaag gagaagagat gttaccttta gaaggaaaac tagttttaag
     2281 tatagaacaa gcaatagcag cacctttttg tacaaggcaa ttggcagatt tgggagctag
     2341 agttattaaa atcgaaagac ctgaagtggg agatttagca agaggatatg ataaaagagt
     2401 agatggcata gctagtcatt ttgtatgggt aaatcgtagc aaagaaagtt tggctattga
     2461 tttaaaagat cctgatgggc ttgaatttat caagacgatt ttaccaaaag tagatatttt
     2521 tgtacaaaat ttagcatttg gagcatctaa aagattggga ttagattatg aaaatctaaa
     2581 aaaatataac ccaaagatta tagtttgcga tatttctgga tatggcgaag gtggaaatta
     2641 tgggcataaa aaggcttatg atcttttaat acaatcagaa agcggcttag tttctataac
     2701 gggtacgcaa gatgaatgtg taaaagttcc aatcagtatc gcagatattt ccgcaggaat
     2761 gtatgcttat agcggtattt tacaggcatt attatactta gaaaaaacgg gaaagggttc
     2821 tagggtagaa atttccatgc tagaatgtat ggctgaatgg atgaattatc ctctttatta
     2881 cacctataaa aatgcaactc ctccagagag aaagggtgca tttcatgcaa gcattactcc
     2941 atatggtcct tataaggcaa aagatggagt tgtaatgttt ggcttgcaaa atccaagaga
     3001 gtgggaaagt ttttgtaaaa ttgtattgca agatgaatca ttgatcgagc atgaagattt
     3061 taaaaataat accttaagaa ccaaaaatgc atcaaaagta aaagaaataa tcgaagatgc
     3121 tttcaaaaac cttagtgcaa aagaagttgt agatcgtctt gatgaagcaa aaattgcaaa
     3181 tggaaatgtt aacgaactta atcaagtatg ggagcatcca caactaaaag ctagaaatcg
     3241 ttggagggaa gttgatagtg aagttggaaa aattcctgca cttttgccac ctgcgacaaa
     3301 taacaattat gaagctagaa tggataaaat cccagctctt ggagaacata cagaatcaat
     3361 tcttaaagaa tttggctttt ctgataagat aaatttattc aaagaaaaaa agattatcta
     3421 aggattttat atgaaagcca aaagtttttt atttgttcca tcaatttttc cagaaagatt
     3481 tacaaaagct ttgcaaagtg gtgctagtca aattattatt gatttagagg attctgttga
     3541 agtggcaaaa aaagaagttg gaagaaaaaa tattgtagat ttttcaagcc aatgtgctaa
     3601 aaataatgat aaatttctta taagaatcaa tgaaacaaaa agcaaggaat ttcaaaaaga
     3661 tttgtcttta atttcaacta ttaaagaatc taatggcatt attggcgttg tattgccaaa
     3721 agcgcaaagt tatgaggata tagatatgct tagccaattt gaacttccta tattacctat
     3781 tattgaaagt gcgttaggag tggaaaattt agatgatatt gctaggcatc cgagtgtttt
     3841 agcattaagt tttggaagtt tagatatgac tttggattta aatttgcaag agggtgaggg
     3901 taagaatttt attttaaata gcattagaac acagattgtt ctaaaaagca caaaatacaa
     3961 tcttttatcg ccaataaatg gagtttatcc tgatataaaa aatattgatg gattaaaaga
     4021 ggatttaata tttgcaaaat caatggggtt tggggggtct ttgtgcattc atccaaacca
     4081 agttgcacca attaatgaag tttttagccc atcggccaag caaattgcat gggcaaaaga
     4141 aattttatca cttaggcaaa atagcaatga tattattttt aactacaatg gaatgatggt
     4201 ggatctaccc gttattaaga aagcagaaca aattctgtta gatagcaatt caaatctctc
     4261 atagggagat ttgaataaat tatttgtgta taaatataat acttttttta agatatttta
     4321 tcctcttact tgtctttaaa ataacttata atatttctaa aaagctatgt tttgtgcaaa
     4381 ttttaagctt taaaattgtt tttataatta ttatcaaagt taagtaaatt taaagtcatt
     4441 tttatctata cttcaaaatt gattttaact atcataatag cctaatacaa gaaaggaaaa
     4501 aggataatga atgctaaaaa gcttaaatta agcattttat gtttttgttt gatgggatta
     4561 ggtgaaatca aagcagaaga acaataccaa cttgatgatg tggtagtgag tgcaagtggt
     4621 tttgaacaag acttagtgga tgcgcctgct agtatttctg ttattactaa agaagagctt
     4681 agtaaaaagc ctattaagga tataggagaa gcaatttcgg atatcccggg tgttgatgtt
     4741 actatgaata aaaccggtac ttatgatttt agcatacgag gttttggaag ttcttacact
     4801 ttggttttga ttgatggaaa gcgtcaaagc gttgctaatg gtttttatga taatggtttt
     4861 ggcggtagcg aatcaggata tttaccaccc gcatctatga tagagcgtat cgaggtgata
     4921 cgcggacctg cttctacact ttatggtagc gatgcagtag gtggggtaat aaatatcatt
     4981 actaaaaaaa atcccaataa aaccgaagcg aatatagaat ttagcaccct tttacagcag
     5041 cattctagta aatatggaaa tgcgggtggt tttaatgctt atgtggctac acctttgatt
     5101 gaagatacgc tttcaatttc tgctaggatt aagtattatg ataaggcagc ttctgattta
     5161 aaatggccta cgccagtttg gagtaatggt actcaaagac ctgaaaatta tcaaatcgca
     5221 agtcatagtc ctggatattt tacgagttta ggttttggat caagactgaa ttggactgta
     5281 gatgatagca ataatgttta tttagatgtt gagcgttata tcaatgaaat ttcagtaaat
     5341 tccacaagta gtagtgctat taaaagcgaa aggcaattgt ttaaagacaa tgtcgtttta
     5401 aatcatgatg gaaattatga atttggaact acaaattcat acttacagta tggtagtact
     5461 aaagataaag atctgcatag tcaaatttgg gtaggagaag gaaaggttgt cttgccttgg
     5521 aatttggata aatatggaaa tttagtaagt acctttggaa caagaataga ctatgagaca
     5581 ctcaaaaacg atcaagaaag tgcaggtagc gaaataaggg gtaaaaatct tgatcaaact
     5641 acggttgcac tttatggcga gggtgaatat tttatcagtg atgatttgat ttttactaca
     5701 ggcttgcgtt atatttatag tgatttgttt gattctgaag taactcctag agtatatctt
     5761 gtttatcatt taaatgataa tgttgctttt aaaggaggtg tagctatggg ttataaaact
     5821 ccagcagcaa aacaactcac caatggttat tataattata gcaataatgg tgcttctttt
     5881 ggaaatcctg atttaaaacc tgaagaaagt acaaattatg agctaggagt tgattttaga
     5941 atatttgatt ttgctcatta ttctattaca ggatttatta ctgattttaa aaatcaaatc
     6001 agtagcgaag agttaacagg aatgtacaat ggtattgatt gtgccaatgg tgttacatgc
     6061 gaacgttcta tcaatcttgg taaaacacaa actaggggta tagaattggc tttcaataca
     6121 aaaccttata agggttttag tgttaattca agttatactt ttatggataa tcgctacaag
     6181 gatggacaga caaattggtt tggtggagat agaatagaaa atttaccaag acatattgct
     6241 atgttaaaat taaattacga gcaaggagaa tttagctctt atgttaaagc gcgtgcaaga
     6301 cttgatacta tagccagatc aaaaggtggt ggcagtggca ctttgccatg gcaaaaatat
     6361 aagccttttt atatagtgga tttgggagta aattataaaa tcgataaaca atcaagtttg
     6421 agctttacag tgcaaaatct ttttgataaa gatttctttg atccgcaagt tacaagatgg
     6481 gatggtgcta atccaggagg ttatgcaaat cgctatcaag attatacaga aggaagaagt
     6541 ttttggttaa gttataaata tgatttttaa attgaaaaaa agagtgtctt aacttaaaac
     6601 aagtaaaaac aaagtataat gaagaaaaaa taaaggcttt gttttatgat atttaaaaat
     6661 ttaaaagagc ttcctttttg cgagtctaat tatatcaaac ccaaaagatt tagttatgag
     6721 agcaatggaa agttttgtac ttgggatttt atagaatcca aagatagcgt ttcaattctt
     6781 ttatatcata aagaattgaa aagctttatt tttgttcgtc aatttcgcat accgctttgg
     6841 tatcatcaaa agcaagataa aaactatcat aaagatgaaa atatgggcta taccatagaa
     6901 ctttgttcag ggcttgtaga taaagattta cccttagagc aaatagccaa agaagaatgc
     6961 atcgaagaat taggctatgc ccctaaagaa tttgaaaaag taggcgactt ttatacaggt
     7021 tttggttcgg gggttagtaa gcaaagtttt tattttgcaa ttgtagatga gaatgacaaa
     7081 atttgtgatg gtggcggggt tgatgacgag caaatagagg ctgtttttgt aaagatcaat
     7141 gaatatgaag aattttctaa aaagataatc catacacctt tgcttgattt tgcttatttg
     7201 tggtttttaa aagaaaagaa agaactttgc cttaaataaa taaggcaaag aattttggat
     7261 taatttgctt cattaagcat ttctttaaat acatcaaata aatgcaaaga cgcattttca
     7321 gcattctcac attttttgat aattgcatct tgagtattgc ttaagcttac atcttctgtg
     7381 tttgcgatgc ggatagcgct attcatattt tcatgtactt tttgatgtgg ctcattgatt
     7441 tttataaagc ttttgctatc gccaaatctt tcttttccgg tacttgctac ccatttacct
     7501 aaacgacaac ttgtatgatc ggctaattct tgtccagatt ttgcaaaaat ttctttatat
     7561 ccattaagtt taaatgctat atgatcaagt tttgccaaag atacaaatgc ttctgaggca
     7621 atacctacag cattcgaatt tgtagagtgt gcttcgttga ctaagtgggt aaatttttct
     7681 gaaaaactca taatgtgtgc gttagaatta atagaaattt tttccacttg ctcactttgg
     7741 gtatacattt catttgcatt ttgttttaga agattgatat tcatttccac ttctgttgta
     7801 gctttttgag ttttttcagc taactttcta acttcatccg caacaacagc aaaaccccta
     7861 ccatgttctc ctgctctagc agcctctata gcagcattta atgctaaaag attggtttga
     7921 tcggatacat ctttaataag gttaattaca tttgtaatct catcaacgct acgatgtaaa
     7981 gttcctgcaa catcgcgtgt tttattagct gactctgtga tatcacccaa agaagcgttt
     8041 atagaattgg ctatatggtt taattcatcc atctcagcta gtgaagtttt ggaataatta
     8101 gaaataattt cagctttatt aacattttca agcatatcac tttggactat ggtaatattt
     8161 ttcaaaacac cgcctaataa tacatttaaa agatcggttt ttaactttga ctctaaagct
     8221 tcttgctcta agagtgaaat tttatctttt aactctaaat tttcagcctt gattttctca
     8281 agctgctgag taagattttg gttttcattc ttgatatctt gaagctctgt atgatttatt
     8341 ttacttccaa acatattttt ttaccctatt ttttatagtt tgctagatat tggtttaact
     8401 gatctttaat atgtaatttt tcttttttaa gatttgaaat ttcaatatca cttaataaat
     8461 ttcttccttc ttctgcatct ttaatttgat cgtcaagttc attatggcgc tcaaataatt
     8521 tatcaaaatg cgcatctttt ccttttaact ctgacataag ttcacgatat tcatgtagca
     8581 taaaattctc cttaaaaatt gatacaattt aaaaaatatt aaacgatatg ttacattata
     8641 actaattaaa tgatattttt ggcttaaaaa atgctaaata attcaataaa tcttaaatat
     8701 gttacaaatt agcgatttgt taaattaaat aattataatg aagattttta agtcattgag
     8761 gacgaatcct caagagttta tttagagttt tgttttttta aagttcttaa agtagaggca
     8821 gcaattctca tttttcttgt agtgccatct tctagggtta cacgaactgt tctaagatta
     8881 ggtaaaaagc gtctttttgt tttattgtta gcatggctga cattattacc caccattggt
     8941 cccttacctg tgatttgaca tattcttgcc atatttgcat cctttggaaa ttttaa
//
LOCUS       DBBXOW010000069         8965 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.070, whole genome shotgun sequence.
ACCESSION   DBBXOW010000069 DBBXOW010000000
VERSION     DBBXOW010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8965
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.070"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            41..1135
                     /locus_tag="ACJE1S_001568"
     CDS             41..1135
                     /locus_tag="ACJE1S_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HGG0807098.1"
                     /translation="MIKKIEHYKNILISNFKGLIFTASIVFFAMYLSSVQSIKDTTHL
                     AAAAFAIIIGALLSPWFFKYQHHLQAGVHFSAKKLLRLGIILYGFNITLTELLSVGLK
                     GFILSMIVIFFIFILALIVGVKVFKLDKETSMLVGAGSAICGAAAVLALESSLKSDPF
                     KGILAVGTVVIFGLVFMFLYPIVFSLDLFPYFNQHAMGIFMGATLHEVANVVGAAEMA
                     KDMANFDQSASNIAIIIKMMRVILLVPFLLIITYFFAKNQHSSKEKTEKNISIPYFAF
                     IFLGVIVINTYLASRENFLGISTSDIISFGKLLCTLCIVFAMAALGLQIDFKKFLKSG
                     SRVFGLAFVLGLVLVFGGYFLTLFFRGILW"
     gene            1227..1799
                     /locus_tag="ACJE1S_001569"
     CDS             1227..1799
                     /locus_tag="ACJE1S_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807099.1"
                     /translation="MKKMFYGIAVSLILATSLSAVSFNQDSLKVSFEGYKTEDMVGVG
                     GEFKNVKYKFSKNTSTLASYLKGARAVVNPSSVFMGEGNEIITDNLAKVFFPSLLGNS
                     DIKVVFKDVVTGENKGVISARVTIDKKSTLVPLSYTIENNKFVAKGQLDLHAFKNSSQ
                     ALKALSDVAPGHGGISWPLVDIVFSADVVQ"
     gene            complement(1800..2399)
                     /gene="rsmG"
                     /locus_tag="ACJE1S_001570"
     CDS             complement(1800..2399)
                     /gene="rsmG"
                     /locus_tag="ACJE1S_001570"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HGG0807100.1"
                     /translation="MNLDFLNLILSDFNEEDFRAKLKIYKEILNKFNRIHNLTQLKNI
                     DENILDSIEILKYFDFSKAKNIVDIGSGAGFPAIFLAFILPSNFHLFEPNPKKAAFLR
                     SIKIECNLTNLTVYKEKVENYKSSFKADIITSRALMDVKPLIKLCLNISDQKTIFILW
                     KGSEIFDEVEGLKDYDIFENGLRRYCVLKNTQSGMNTTL"
     gene            complement(2396..2956)
                     /gene="ribA"
                     /locus_tag="ACJE1S_001571"
     CDS             complement(2396..2956)
                     /gene="ribA"
                     /locus_tag="ACJE1S_001571"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HGG0807101.1"
                     /translation="MDIKISEIANLPSKWGSFQIQSFKEGEKEHLCIFKNTPQDILNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKHGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYKISKVNLLTNNPQKIHSIQDKIMAR
                     VPILINPNRFNANYLEVKQNQMGHLL"
     gene            3013..3996
                     /gene="hemB"
                     /locus_tag="ACJE1S_001572"
     CDS             3013..3996
                     /gene="hemB"
                     /locus_tag="ACJE1S_001572"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HGG0807102.1"
                     /translation="MFKRFRRLRLNESLRAMVREHTLSINDFIYPLFVVNGKGIKKEI
                     SSMPDVFQMSLDEILKECKIISELGIKAIILFGVLENDKKDSCGSDAMDDEGLIARSI
                     REIKKEFPNLFVISDLCFCEYTDHGHCGIIDPKTKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGIIETLRKALDEEGFENLPIMAYSTKFASSYYGPFRDVADSTPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAGRAGVINYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            3993..4904
                     /gene="argF"
                     /locus_tag="ACJE1S_001573"
     CDS             3993..4904
                     /gene="argF"
                     /locus_tag="ACJE1S_001573"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002832279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HGG0807103.1"
                     /translation="MRHFLTLRDFSKYEILSLVEHASELKKNPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGESIKDTARVIGAMVDFVMMRVNKHE
                     SLVEFAKYSKAPVINALSELYHPTQVLGDLLTIKECGKMKDDIAKVAFVGDSNNMCNS
                     WLIAAAILGFDFSVALPKNYEINSEILEFAKEKAKISGAKIFLTHDKFEAIKGKDVVI
                     TDTWVSMGEESEKEKKIKDFDGFIIDEEAMNAANQDAILLHCLPAYRGYEVSEESFEK
                     HSKVIFEEAKNRLYVVKALLCFLNKEK"
     gene            4954..5445
                     /locus_tag="ACJE1S_001574"
     CDS             4954..5445
                     /locus_tag="ACJE1S_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HGG0807104.1"
                     /translation="MKELEKYSNCLKRIDEFSQNLGMKKEDRAIFEMKQSENENEKCL
                     ILKNGSFDSPEPWFIMDENDQIHTLISLNSLKNILENLKQTQKENFELRLEKAIYQQI
                     PIDFSDVWIVAMDEIKRKAQEGVMEISIDLEKLLADIKKEHPNLFVDMQAMVERVKNN
                     ERL"
     gene            5432..6787
                     /gene="hemN"
                     /locus_tag="ACJE1S_001575"
     CDS             5432..6787
                     /gene="hemN"
                     /locus_tag="ACJE1S_001575"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HGG0807105.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTNFKYEEYIEILKKQNK
                     ALSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLKYLFQELDILSTIIDTKREVVQM
                     HFGGGTPTFFSAKQLESLILKIKSVFGNFTKDAEISCEIDPRFLNEEQADVLTKNGFN
                     RISFGVQDFDERVQKEIHRIQPFELTQNALKLVRDRGIKSVNMDLIYGLPFQSLQSFA
                     KTLEKAMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLIQNG
                     YKMIGMDHFAKEEDELFKALENGTLHRNFQGYTAKGGADLIGIGLTSIGEGQSHYAQN
                     FKDMPSYEAAISKGRLPFERGIKLSYDDELRKAVIMDLMANFRLDIKAIEKEFKINFK
                     EYFKEDLKALEEYKEFIDLSENFILVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            6798..8063
                     /locus_tag="ACJE1S_001576"
     CDS             6798..8063
                     /locus_tag="ACJE1S_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HGG0807106.1"
                     /translation="MNFSQISDACVKCGKCIPVCTIHEVNRDETTSPRGFLDLLAAYK
                     EEKLELDKEAKKIFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKIIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQSQDQNVGMNAKFSMPFVKKGRLLTSFNKKSF
                     LNSNPDFIDNGGEKTVGFFVGCLANYFYIDTANAVLKIAKEVKINVDLMKEQVCCSAP
                     QFFTGDFKSVEILAKKNIEYFEKKLEKLDAIIIPEATCSAMLKIDLEHFFNMQNEPEW
                     AKRAQKISSRIYMASEYFYKFTNLKELLESKKKLNYSITYHDPCHARKMQGVFKEPRE
                     LLKANYHFVEMSNPNACCGFGGVSMQTDYYDRALSVGLKKASMIDESKACVVSAECSA
                     CRMQISNALEQNSSKAIFASPLELIAKAL"
     gene            8064..8804
                     /locus_tag="ACJE1S_001577"
     CDS             8064..8804
                     /locus_tag="ACJE1S_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5416 family protein"
                     /protein_id="HGG0807107.1"
                     /translation="MKITFQGKSDEYEIEKSYFYNRAFIVKDKIPNRDKIDFITDSVR
                     LLEFSDHSFEFDEILKCLYDENEENTIIVEEIFTTSQIKQDEEPRNPPLEIKIDEAPK
                     NNTRFTPFNTFSRIFNKDCFIFTSDNCEQKESVKVEKNQKLNIFESLKIEDLDASFVK
                     IEILDYDASNDSVNFDLDAFPSGASYKYGISQNTMYIILQGKMPSLLLLDFLKSFVYK
                     NKKELACEKTFVLMLNHKLVYELKAFFT"
     gene            complement(8807..>8965)
                     /locus_tag="ACJE1S_001578"
     CDS             complement(8807..>8965)
                     /locus_tag="ACJE1S_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807108.1"
                     /translation="VFMLIMRYEKKLELLNQSIQNIKEEVNELKNTTQNNRSLIEKNR
                     SDIESINK"
BASE COUNT         3119 a         1081 c         1685 g         3080 t
ORIGIN      
        1 taattgtaat tttataattg caaattaaag gagaaaacat atgataaaaa aaatagagca
       61 ttataaaaat atactgattt caaattttaa aggtttgatt tttacagcct ctatagtgtt
      121 ttttgcaatg tatctttcaa gtgttcaaag tattaaagat acaacccatt tagcagcagc
      181 tgcttttgct attattatag gagcattact ttcaccttgg ttttttaaat accaacatca
      241 tttacaagca ggagtgcact ttagtgctaa aaaactttta agattgggta ttatcttata
      301 tggttttaat attactctaa ccgaactttt aagtgtggga ttaaaaggct ttatactttc
      361 tatgatagtt atatttttta tttttatttt agctttgatt gtgggtgtaa aggtttttaa
      421 actagataaa gaaacttcca tgctagtagg tgctggaagt gctatttgtg gagcagcagc
      481 tgttttagcc ttagaatcaa gcttaaaaag tgatcccttt aaaggaattc tagccgttgg
      541 tacagtggtg atttttgggc ttgtttttat gtttttatat cccatagttt tttctttaga
      601 tctttttcct tattttaatc aacatgctat gggtatattt atgggtgcaa ctttacatga
      661 ggtagccaat gttgtaggag ctgctgaaat ggcgaaagat atggcaaatt ttgatcaaag
      721 tgcttcaaat attgccatta ttataaagat gatgagagtg attttgcttg tgccattttt
      781 attgattata acttattttt ttgctaaaaa tcagcattca agtaaggaaa aaacagaaaa
      841 aaatataagt attccttatt ttgcatttat ttttttagga gtgattgtta taaatactta
      901 tttggcaagt agggaaaatt ttcttggaat ttctacaagt gatattatat cttttggaaa
      961 attactttgt actctttgta ttgtttttgc tatggctgct ttaggacttc aaatcgactt
     1021 taaaaaattc ttaaaaagtg gctcaagagt ttttggttta gcttttgttt tgggattggt
     1081 tttggttttt ggaggatatt ttctgaccct attttttcga ggtatacttt ggtaataaaa
     1141 attactattt agaaaaaatt atttttttat aaaaatatgc tataattctc acgcaaatca
     1201 aaattttatt aaaaaaggat aaaaaaatga aaaaaatgtt ttatggcatc gcagtctctt
     1261 tgatacttgc aacaagtttg agtgctgttt ctttcaatca agatagcttg aaagttagtt
     1321 ttgaaggata taagaccgaa gatatggtag gagtgggtgg agaatttaaa aatgttaaat
     1381 ataaattttc taaaaatact agtactttgg caagctattt aaaaggtgct agagcagtgg
     1441 taaatccaag cagcgttttt atgggtgagg gcaatgaaat cattacagat aatcttgcta
     1501 aagtattttt ccctagtttg cttggaaatt cagatattaa agtggttttt aaagatgtag
     1561 ttacaggtga gaataaaggc gtgatctcag ctagagtaac tatagataaa aagagcacgc
     1621 ttgtgccttt aagctatact atagaaaaca ataaatttgt agccaaagga cagcttgatt
     1681 tacatgcttt taaaaatagc tctcaagctc taaaagcttt gagtgatgtt gcaccaggac
     1741 atggcggaat ttcatggcct ttagtagata tcgtttttag cgctgatgta gtacaataat
     1801 tacaaagtgg tattcatacc actttgagta ttttttaaaa cgcaatacct tcttaagcca
     1861 ttttcaaaaa tatcataatc tttcaaccct tctacttcat caaaaatttc acttcctttc
     1921 caaagtataa aaattgtttt ttgatcactt atatttaaac aaagttttat taagggtttt
     1981 acatccataa gagctcttga agtgataata tcggctttaa atgagctttt ataattttca
     2041 actttttctt tgtatacggt taaatttgtt aagttacatt ctattttgat acttcttaaa
     2101 aatgcagctt tttttggatt gggttcaaaa agatgaaaat tgcttggtaa aataaaggct
     2161 aaaaaaatag caggaaagcc agcaccgcta ccgatatcga ctatattttt tgcctttgaa
     2221 aaatcaaaat atttaagaat ttcaatgcta tctaaaatat tttcatctat attttttaat
     2281 tgagtgagat tatgaatgcg gttaaattta tttagaattt ctttatagat tttaagctta
     2341 gccctaaaat cttcttcatt aaaatcagat aaaattaaat ttaaaaaatc caaattcaaa
     2401 gtaaatgccc catttgattt tgttttacct ctaaataatt tgcattgaag cggttaggat
     2461 ttataagtat aggaacgcgc gccatgattt tatcttgtat agagtgaatt ttttgtggat
     2521 tgttagtaag taaattaacc ttagaaattt tataatgttt tagtataaat tctactattt
     2581 cataagttct ctcatcagcc ttaaagccta gttggtgatt agcttttatg gtatcaaaac
     2641 ccttatcttg caaagcataa gcattgactt tattaaaaag tccaattcca cgtccttctt
     2701 gccttaggta aatcaccatt ccaccatgtt tttctatata ttttaatgaa aattcaagtt
     2761 gttctccgca atcgcatttt aagcttccta aggcatcccc tgttaaacat tctgaatgaa
     2821 ttcttaaatt taggatatct tgtggagtgt ttttaaatat acataaatgt tctttttctc
     2881 cttctttgaa gctttgaatt tgaaaactac cccatttgct aggtagattt gcaatttctg
     2941 aaatttttat atccatttgc tactctttat aatcaaaatt atgataacat tgtagcaaaa
     3001 aaaggacaaa aaatgtttaa aagattccgc agacttagac ttaatgagag tttaagggct
     3061 atggtaagag aacacactct tagtattaat gattttattt atcctctttt tgttgtaaat
     3121 ggtaaaggaa ttaaaaaaga aatttcatct atgcctgatg tatttcaaat gagtttagat
     3181 gaaattttaa aagaatgtaa aatcataagc gagctgggta taaaagcgat tattcttttt
     3241 ggtgttcttg aaaatgataa aaaagatagc tgcggaagtg atgcgatgga cgatgaggga
     3301 cttattgcaa gaagtataag agagataaaa aaagaatttc caaatctttt tgttatcagc
     3361 gatctttgct tttgtgaata tactgatcat gggcattgtg ggataattga tcctaaaacc
     3421 aaaagtgtag ataatgacgc aactttagaa atttcagcca agcaagcctt agtccatgca
     3481 agagcggggg ttgatatgat agcacctagc gggatgatgg atggtattat agaaacttta
     3541 cgcaaagcct tagatgagga aggttttgaa aatttgccta taatggcata ttctactaaa
     3601 tttgcttcaa gttattatgg gccgtttcgt gatgtagcgg attcaacgcc aagttatgga
     3661 gatagaaaaa gctatcaaat ggattttgca aatggaaaag aagccttaga agaaagcttg
     3721 gaagatgaag cacaaggagc ggatatttta atggtaaaac ccgctttagc ttatcttgat
     3781 gtagtgaaag aaatttcact tcattctaat ttgcctttgt gtgtttataa tgtaagtggt
     3841 gagtatgcca tgctaaaagc agcgggtcgt gcaggagtga ttaattatga aaaagtttta
     3901 tatgagacaa tgatagcttt taaaagagcg ggtgcaaagc taattatcac ttatcacgct
     3961 aaagaattag ctaaaatgtt aaaaggagaa aaatgagaca ttttttaaca ctaagagact
     4021 tttctaaata tgaaatttta agtcttgtag agcatgcaag cgagcttaaa aaaaatccca
     4081 aaaagctttt gcaagataaa actttagcaa tgatttttga aaaaaactcc acaagaacta
     4141 gaatggcttt tgagcttgct atcacagagc ttggtggaaa ggctttattt ttaagcagta
     4201 atgatttgca attaagccga ggtgagtcta taaaagacac agctagagtt attggggcga
     4261 tggttgattt tgtaatgatg agggtaaaca agcatgaaag tttagtagaa tttgcaaaat
     4321 attctaaagc accagttatc aatgctctaa gcgagcttta tcatccaacg caagttttag
     4381 gggatttact cactataaaa gaatgtggca aaatgaaaga tgatatagct aaggtagcct
     4441 ttgtgggcga tagcaataat atgtgtaatt cttggcttat tgcagctgcg attttgggat
     4501 ttgattttag tgttgcattg ccaaaaaatt atgaaatcaa tagtgaaatt ttagaatttg
     4561 ccaaagaaaa agcaaaaatt tcgggagcaa aaatcttttt gactcatgat aaatttgagg
     4621 ccataaaagg taaagatgta gtcattaccg atacttgggt ttctatgggt gaagagagtg
     4681 aaaaagaaaa gaaaattaaa gattttgacg gctttattat tgatgaagag gctatgaatg
     4741 cggcaaatca agatgcgatt ttattgcact gcttacctgc ttataggggt tatgaagtaa
     4801 gcgaagagag ctttgaaaag cattcaaaag tgatttttga agaagcaaaa aatcgccttt
     4861 atgtggtaaa agccttgctt tgctttttaa ataaggaaaa ataagatttt atataatttc
     4921 ataagttgga gaagatagga taaggagttt ttagtgaaag aacttgaaaa atatagtaat
     4981 tgcttaaaac gcattgatga atttagccaa aatttaggca tgaaaaaaga ggatagagct
     5041 atatttgaaa tgaagcaaag tgagaatgaa aacgaaaaat gcttgatact taaaaatggt
     5101 agttttgatt ctcctgaacc ttggtttata atggatgaaa atgatcaaat tcatacactt
     5161 atttctttaa atagtcttaa aaatatttta gaaaatttaa aacaaactca aaaagagaat
     5221 tttgaacttc gccttgaaaa agcgatttat cagcaaattc ctattgattt tagtgatgtg
     5281 tggatagtgg caatggatga gataaaacgc aaggcgcaag agggtgttat ggagatcagt
     5341 attgatcttg aaaaattgct tgcagatatt aaaaaagaac atccaaattt atttgtagat
     5401 atgcaagcta tggtagaaag ggtaaaaaat aatgagagat tataaggctt ttgtgaaata
     5461 ttctaaggca ggaccgcgtt atacttctta tcctactgca gtggaattta acacaaattt
     5521 caaatatgaa gaatatatag aaattttaaa aaagcaaaac aaagctttat cgctttattt
     5581 tcatttgcct ttttgcagaa gcgcttgtta tttctgtggc tgtaatgtta tttataccgc
     5641 caaagaagaa agtaaggaga gatatttaaa atatcttttt caagaacttg atattttaag
     5701 cactattata gatactaaaa gagaagtggt gcaaatgcac tttggtggtg ggacgcctac
     5761 tttttttagt gctaaacagc tagaaagttt aattttaaaa attaaatctg tttttggaaa
     5821 ttttaccaaa gatgctgaaa ttagctgtga aattgatccg cgttttttaa atgaagagca
     5881 agctgatgtt ttaaccaaaa atggttttaa tcgcatcagt tttggcgtgc aagattttga
     5941 tgaaagagtg caaaaagaaa ttcatagaat tcaacccttt gagctaacgc aaaatgcttt
     6001 aaaattggta agagataggg ggataaaatc tgtcaatatg gatttgattt atggtttgcc
     6061 ttttcaaagt ttgcaaagct ttgctaaaac cttggaaaaa gctatgcttt taaatccgga
     6121 tcgtttggct atttttaatt acgctcatgt accttggctt aagaaaaata tgagaaaatt
     6181 tgatgaaaat actttgccaa gccctgatgt taagcttgaa attttggaat tttgtgagaa
     6241 atttttgatt caaaatggtt ataaaatgat aggtatggat cattttgcca aagaagaaga
     6301 cgagcttttt aaagctttgg aaaatgggac tttacatagg aatttccaag gctatactgc
     6361 taagggcggc gcagatttga tcggtatagg acttactagt ataggagaag gacaaagtca
     6421 ttatgcacaa aattttaaag atatgccaag ctatgaagct gcgattagca agggaagatt
     6481 gccttttgaa agagggatta agctaagcta tgatgatgag cttagaaaag ctgtgattat
     6541 ggatttgatg gcaaatttta gactagatat taaagctata gagaaagaat ttaaaatcaa
     6601 ttttaaagag tattttaaag aagatttaaa agctttggag gaatataaag aatttattga
     6661 tttgagtgaa aattttattt tagtaaatga aacaggcgtt ttgttgatac gaaatatagc
     6721 tatgtgtttt gatgcttata tgaaaaatat aagtgaagat aaaaaagtct tttctaaaac
     6781 ggtttgatgg gatggtgatg aattttagtc aaataagtga tgcttgcgtt aaatgtggaa
     6841 aatgtattcc ggtttgtact attcatgaag taaatcgcga tgaaactaca agccctaggg
     6901 gttttttaga tcttttagca gcttataagg aagaaaaatt agagctagat aaagaggcta
     6961 aaaagatttt tgaatcctgt tttttgtgta caaattgcgt cgaggtttgt ccgagtaaat
     7021 taagagtaga taatgccatc gaagaagtgc gctatgatat agctaaaaaa tttggtatag
     7081 catggtataa aaaaattatc ttttttttct taagaaggcg taaaatttta gatttggtcg
     7141 cgaaattagg ctatgtgttt caaagctgtg cttttaaaat tcaaagtcag gatcaaaatg
     7201 taggtatgaa tgctaaattt tccatgcctt ttgttaaaaa aggaagattg cttacgagtt
     7261 ttaataaaaa aagtttttta aattcaaacc ctgattttat cgacaatgga ggagaaaaaa
     7321 ctgtaggttt ttttgtgggt tgtttggcaa attattttta catagacaca gctaatgctg
     7381 tacttaaaat cgccaaagaa gtaaaaatca atgtggattt aatgaaagag caagtttgtt
     7441 gtagtgcacc gcaatttttt acaggtgatt ttaaaagtgt tgaaattttg gctaagaaaa
     7501 atatagaata ttttgaaaaa aaattagaaa agcttgatgc tattatcatt cctgaggcaa
     7561 cttgctcggc aatgttgaaa atagatttag aacatttttt taatatgcaa aatgagccag
     7621 agtgggccaa aagagctcaa aagatttcct ctcgcatcta tatggctagt gagtattttt
     7681 ataaatttac aaatttaaaa gagcttttag aaagtaagaa aaagcttaat tatagcatta
     7741 cttatcatga tccttgtcat gcgagaaaga tgcaaggggt ttttaaagag cctagagagc
     7801 ttttaaaagc aaattatcat ttcgttgaaa tgagtaatcc taatgcatgc tgtggttttg
     7861 gtggggtaag tatgcaaacg gattattatg atagggcttt gagcgtagga cttaaaaaag
     7921 caagtatgat tgatgaaagc aaagcttgtg tagttagtgc cgaatgttcg gcatgtagaa
     7981 tgcaaatttc aaatgctttg gagcaaaatt ctagtaaagc aatttttgca agtcctttgg
     8041 aacttatagc gaaagcctta tagatgaaaa taacttttca aggtaaaagt gatgaatatg
     8101 agatagaaaa atcatatttt tacaataggg catttatagt taaggataaa attcccaata
     8161 gagataagat cgactttata actgatagtg taaggctttt ggaatttagt gatcatagct
     8221 ttgaatttga tgaaatttta aaatgcttgt atgatgaaaa tgaagaaaat accatcatag
     8281 tagaggaaat ttttacaaca agtcaaataa aacaagatga agagccacgc aatccacctt
     8341 tagaaataaa gattgatgaa gctcctaaaa ataatacaag atttactcct tttaatactt
     8401 tttcaagaat ctttaacaag gattgcttta tttttacatc cgataattgt gagcaaaaag
     8461 aaagtgtgaa ggtagaaaaa aatcaaaaat tgaatatttt tgaatcattg aaaattgaag
     8521 atttagatgc tagttttgta aagattgaaa ttttagatta tgatgctagt aatgacagtg
     8581 tgaattttga ccttgatgcc tttcctagcg gagcaagtta taagtatgga atttctcaaa
     8641 acaccatgta tataatttta caaggaaaaa tgccaagcct tttacttctt gattttttaa
     8701 aaagttttgt ttataaaaac aaaaaagagc tagcttgtga gaaaacattt gttttaatgt
     8761 taaatcacaa gttagtttat gagcttaagg ctttttttac ttgaaattat ttgttgatac
     8821 tttcaatatc agagcgattt ttttcaatca aagagcgatt gttttgagta gtgtttttaa
     8881 gttcattcac ttcttctttt atattttgta tgctttgatt taaaagctca agttttttct
     8941 catagcgcat gatgagcata aatac
//
LOCUS       DBBXOW010000070         8697 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.071, whole genome shotgun sequence.
ACCESSION   DBBXOW010000070 DBBXOW010000000
VERSION     DBBXOW010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8697
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.071"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(216..1424)
                     /gene="murD"
                     /locus_tag="ACJE1S_001579"
     CDS             complement(216..1424)
                     /gene="murD"
                     /locus_tag="ACJE1S_001579"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HGG0807109.1"
                     /translation="MRISLFGYGKTTQAIAKNLANQFGPFDIYDDHFQEKSKDEWGNH
                     LLNPKEFDEKVSELEIPSPGFPPNHNLIKKAKNLQSEYDFFYDAMPKSVWISGTNGKT
                     TTTQMATHLLSHVGAVMGANVGFPLAELDLNAKIWILETSSFTLHYTHTAKPEIYALL
                     PISADHLSWHGSFENYAKDKLSVLERMNECDIAILPEIYAKTPTKAYIISYKDEFDLA
                     QKMGIDIEKISFKSPFLLDAVMALSIEKILLDSLSYELLNQFIMEKNKLEELQDSQGR
                     LWVNDTKATNENAVMAALNRYKNKKIHLIVGGDDKGVDLSALFNFMKNFNIELYAIGL
                     STQKMLDYALKANLKARKCEFLENAVQEISKTLKNNEVALLSPACASLDQFSSYAQRG
                     EKFKEYVGKI"
     gene            complement(1424..2485)
                     /gene="mraY"
                     /locus_tag="ACJE1S_001580"
     CDS             complement(1424..2485)
                     /gene="mraY"
                     /locus_tag="ACJE1S_001580"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HGG0807110.1"
                     /translation="MYYLSYFSDYAFFTYISVRAGFAFFIALCLSLFIMPKFIAWAKN
                     KNANQPIYELAPQTHKVKSQTPTMGGLIFIGCAVFTSLLCAKLDNVFTITALLCLVLF
                     CLIGLVDDLGKILKKDNHSGLSPKMKLLAQISVGLICILPLYFSPEFNTEFYLPFYKY
                     PLFDMKIFALAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLVGFVFVLETISVILQVGSFKIFNKRVFKMAPIHHHFEKIGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            2565..4043
                     /gene="gpmI"
                     /locus_tag="ACJE1S_001581"
     CDS             2565..4043
                     /gene="gpmI"
                     /locus_tag="ACJE1S_001581"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HGG0807111.1"
                     /translation="MRQKCILVITDGIGFNKEKDFNAFEAAKKPNYERLFREVPNSLI
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGQIIYQNLVRINKAIESCELEKNANLKKLLQK
                     CKRVHVIGLYSDGGVHSMDTHFNALLEICAKNGNEVFAHAITDGRDVSPTSGLEFIRK
                     LKNHCEEIGVHFATLCGRFYAMDRDKRWERVKEYYDCLLGKSKGVSNWVDYIEECYQN
                     ETTDEFIQAAKNENYKGMQEDDGLIFVNFRNDRMKQLIEVLNSQNFKEFEREKVFENL
                     LTMSVYDDKFNIPVLFEKEEIKNTLSETISKAGLTQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPEMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDVCLGEVVECARKHDYAFIITSDHGNCEAMQDKKGNLLTNHTTFDV
                     FVFVEAKGVDKLKENMGLSNIAASVLKILNLEIPKEMNEALF"
     gene            4108..4851
                     /gene="fabG"
                     /locus_tag="ACJE1S_001582"
     CDS             4108..4851
                     /gene="fabG"
                     /locus_tag="ACJE1S_001582"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HGG0807112.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLASFGLKVWINYRSKPELAD
                     ALKDEILAQGGNAAVIKFDASKEDEFENGIKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFTSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQTNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEILSDEIKQAYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            4861..5268
                     /locus_tag="ACJE1S_001583"
     CDS             4861..5268
                     /locus_tag="ACJE1S_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HGG0807113.1"
                     /translation="MDLKEIEQFLDENTPAFLATLGTCGNPRVRPMQSPLLVGDRIYF
                     CTSNNKGLFKHIQNYNGIEFCSCSREGVFLRLRANAVFEPNAKVKELMFEKYPYLVSL
                     YENPQNSRFEVFYLDNLSAKMQFPNGDFKLYKA"
     gene            complement(5288..5953)
                     /gene="tenA"
                     /locus_tag="ACJE1S_001584"
     CDS             complement(5288..5953)
                     /gene="tenA"
                     /locus_tag="ACJE1S_001584"
                     /EC_number="3.5.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050334 - thiaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HGG0807114.1"
                     /translation="MLFSRLIETNSHIWDEYLHHEFVKKLENGSLKEENFLFYLKQDY
                     IYLIHYAKCYARLALNAKNAEELRFAMKFQNYIIEGEIELHKSILKLGINADKLNVKD
                     ESLTNIAYTRYMLSVGESGDFLDMLVALSACAIGYGYIGAEIYKRLGKEKLQNHPYKE
                     WILTYSSDEFQSEIKEFEDFLNSYTQQISQEKFENLSEIFYNVVRLENAFWEHALQMK
                     MDI"
     gene            6067..6300
                     /gene="acpP"
                     /locus_tag="ACJE1S_001585"
     CDS             6067..6300
                     /gene="acpP"
                     /locus_tag="ACJE1S_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG0807115.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIENLKK"
     gene            6334..7548
                     /locus_tag="ACJE1S_001586"
     CDS             6334..7548
                     /locus_tag="ACJE1S_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HGG0807116.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICEGKSGVKKITLFDTTDF
                     PVQIAAEIENFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDANFDQNLDKEEFGVVS
                     AAGIGGLPNIEKNSVICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNANKMLVIGAEAAICPVGIGGFASMKALSTRNDDPAHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGAKIYAELVGFGESADAHHITSPTLDGPL
                     RAMKKALKMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGSEIPAVSSTKGQTGHCL
                     GAAGAIEAVISIMALDNGIMPPTINQFVSDEECDLDYIPNEARKADLRVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            7550..8488
                     /gene="accA"
                     /locus_tag="ACJE1S_001587"
     CDS             7550..8488
                     /gene="accA"
                     /locus_tag="ACJE1S_001587"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HGG0807117.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVAILKKNLEKEIAKT
                     YKNLSDFGRLQLARHPDRPYALDYIDLILNDAYEIHGDRAFRDDPAIVCFMGYLGEKK
                     LIVIGEQKGRGTKEKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGL
                     GAEERGQSEAIATNLYELSDLKTPTIAVVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPSKSEAATKAMKVTADDLKSQGLIDDVIEEPINGAHRNKEAAAVAI
                     ADYVKKALDELEKIDPRELASNRMQKILQLGAFSES"
BASE COUNT         3006 a         1193 c         1672 g         2826 t
ORIGIN      
        1 gggtatacac ttcttggttg ggttaggggt taatgttggg ttagggtgga tagactatga
       61 ttgtttattc ttgttggcga gaatgaatgt tatacttgag ataaattttt tatcaaggta
      121 tgttgtttaa taaatgaatt ttaattctaa gccgaatacg agtcgtttta aattagtgtt
      181 tgataaaaat taatatgtga tggggggggg gtgaattaaa ttttacctac atattcttta
      241 aatttttctc cacgttgagc ataagagctg aattgatcta agcttgcaca agcagggctt
      301 aataaagcta cttcattgtt ttttagcgtt ttggaaattt cttgtacagc attttctaaa
      361 aattcacact tacgagcttt taaatttgct tttaaagcat aatcaagcat tttttgagtg
      421 ctaagtccta tagcatagag ttctatgttg aaatttttca taaaattaaa taaagcgctt
      481 aaatccacac ccttatcatc gccgcccaca ataagatgaa tttttttatt tttatagcgg
      541 ttaagagcgg ccattacagc gttttcattg gtcgctttag tatcattgac ccaaagtcta
      601 ccttgactat cttgtaattc ttcgagttta tttttttcca tgataaattg atttaaaagt
      661 tcatagctta gactatcaag tagaattttt tctatactta aagccatgac agcatcaagc
      721 aaaaaagggc ttttaaaaga tattttttct atatcgatac ccattttttg agcaagatca
      781 aattcatctt tgtaagagat aatataagct tttgtaggtg tttttgcgta aatttcaggc
      841 aagattgcaa tatcacactc attcattctt tctaaaacgc tcaatttatc ttttgcataa
      901 ttttcaaagc ttccatgcca tgaaagatga tccgcactta taggtagaag tgcataaatt
      961 tcgggttttg cagtatgggt atagtgaagt gtaaaagatg aagtttcaag tatccaaatt
     1021 ttggcattta aatcaagctc agccagagga aaaccgacat ttgctcccat tactgctcca
     1081 acatgtgaaa gtagatgtgt agccatttgt gtggttgtgg ttttaccatt tgtaccactg
     1141 atccaaacag attttggcat agcatcataa aaaaaatcat attcgctttg taaatttttt
     1201 gcttttttta taaggttatg gttaggtgga aagccagggc ttggaatttc aagctcgctt
     1261 actttttcat caaattcttt aggatttaaa agatgattac cccattcatc cttgcttttt
     1321 tcttgaaaat gatcatcgta gatatcaaaa gggccgaatt gattggctaa atttttagct
     1381 attgcctgtg tggttttacc atatccaaaa agtgaaattc tcattatctt aactttatcg
     1441 atgcaagcgc aagtaaatta gatagcaagg ctatcatcca aaaacgcact atgattttat
     1501 tttctaccca gcctattttt tcaaaatgat ggtgtatagg cgccatttta aatactcttt
     1561 tattgaaaat tttaaagctt cccacttgta aaatgacaga aatggtttca agcacaaaga
     1621 caaagcctac aagtaaaagc aagatttcat ttttgcttat gatggctaaa aaacctataa
     1681 atccacccaa ggctaagctt ccactatctc ccataaaaac ttgtgcagga tagcagttat
     1741 accataaaaa tcccataaga gctccaatca atgcagcaca gataatcact acctcgccca
     1801 agccttgaat tttaggtaaa agcaaatatt cactataatt taaatttcca ctcaaatata
     1861 aaaatatacc taaggtagat aaagaaaaaa tgctaggaac tgttgcaagt ccgtcaagtc
     1921 catcggttaa attgacagca ttagagctgg agattaagac caaaatccaa aaagcaagag
     1981 caaaaatttt catatcaaaa agcggatatt tgtaaaaagg aagataaaat tctgtattaa
     2041 attcagggct aaaatataaa ggtaaaatac agattaatcc tacgcttatt tgtgctaaaa
     2101 gtttcatttt tgggctaagt cctgagtggt tgtctttttt taaaatttta cccaaatcat
     2161 ccacaagtcc aataaggcaa aaaagcacaa gacaaagcaa ggcggtgatt gtaaatacat
     2221 tatccaattt agcacaaaga agacttgtaa agactgcaca acctataaag ataagcccac
     2281 ccattgtagg cgtttgagat tttaccttgt gagtttgggg tgctagttca taaatgggtt
     2341 gatttgcatt tttgttttta gcccaagcaa taaatttagg catgataaat aaagacaagc
     2401 ataaagcaat gaaaaatgca aagcccgcgc gtacactgat ataagtaaaa aaagcataat
     2461 cactaaaata agaaagataa tacaaaagct agccttcttt ttggttttta aaagcttaat
     2521 tttagtaaaa tctagccaaa aaatttctta taaaagagta aaaaatgaga caaaaatgta
     2581 ttttagttat tacagatgga ataggtttta acaaagaaaa agattttaat gcttttgagg
     2641 ctgctaaaaa gccaaattat gagaggcttt ttagagaagt accaaattct ttaattaaaa
     2701 ctagtggttt agcggtaggt ttgcctgaag ggcaaatggg aaatagcgaa gtgggccata
     2761 tgtgtatagg tagtgggcaa attatctatc aaaatttagt gcgtattaat aaagctatag
     2821 agagttgcga acttgaaaaa aacgcaaatt taaaaaaact tctacaaaaa tgcaaaagag
     2881 tgcatgttat tggtttatat agcgatggtg gggttcattc tatggataca cattttaatg
     2941 ccttgcttga aatttgtgcc aaaaatggaa atgaagtttt tgcacatgca attactgatg
     3001 gacgcgatgt aagtcctaca agtggattag aatttataag aaagctaaaa aatcattgtg
     3061 aggaaatagg cgtgcatttt gctacgcttt gtggccgttt ttatgctatg gatagagata
     3121 agcgttggga aagagttaag gaatattatg attgtttatt aggcaagagc aagggtgtgt
     3181 caaattgggt tgattatata gaagaatgtt atcaaaatga aacaactgat gaatttattc
     3241 aagcggctaa aaacgagaat tataaaggca tgcaagaaga tgatggattg atttttgtta
     3301 attttagaaa tgatagaatg aaacaactca tcgaagtttt aaattctcaa aatttcaagg
     3361 aatttgagcg agaaaaagtg tttgaaaatt tgcttactat gagtgtttat gatgataaat
     3421 ttaacattcc agtacttttt gaaaaagaag aaattaaaaa tacactttct gaaaccatct
     3481 ccaaagcagg acttactcaa cttcatactg cagaaactga aaaatatgct catgttactt
     3541 tctttttcaa tggaggaaaa gaagaacttt tggaaaatga aacaagggtt ttaatcccaa
     3601 gtccaaaggt aaaaacttac gacgaaaagc ctgaaatgag cgcttttgaa gtatgcgatg
     3661 cggttaaaaa agggatagaa aagggcgaag attttatagt ggtgaacttt gcaaatggtg
     3721 atatggtagg ccatacagga gattttaatg ctgccattaa ggctgtagaa gcagtagatg
     3781 tttgtttggg cgaagtggtc gagtgtgcaa gaaagcatga ttatgccttt atcattacaa
     3841 gtgatcatgg aaattgtgaa gcgatgcaag ataaaaaagg aaatttattg accaatcata
     3901 caacttttga tgtttttgtt tttgtagaag ctaagggagt agataagctt aaggaaaata
     3961 tgggacttag taatatcgct gcaagtgtgc ttaaaatatt aaatttagaa attccaaaag
     4021 agatgaatga ggctttattt tgatctgttt gccttttgat atagattttt gttaaaattt
     4081 aattttatat tttttttaag gatagaaatg aaatttagtg gaaaaaatgt tttaattaca
     4141 ggtgcaagta agggtattgg tgcttctatt gcaaaaactt tggcaagttt tggattaaaa
     4201 gtttggatta attatcgctc aaaaccagaa cttgcagatg ctttaaaaga tgaaattctt
     4261 gcgcaaggcg gcaatgcagc tgtgattaaa tttgatgcaa gcaaagaaga tgagtttgaa
     4321 aatgggataa aaactatagt agaaagcgat ggagagctta gctatcttgt aaataatgca
     4381 ggtgttacaa acgacaaact tgccttaaga atgaaactcg aagattttac aagtgtagtg
     4441 gatacaaatt tgagttctgc atttttaggt tgtagagagg ctttaaaaac aatgagcaaa
     4501 aagcgttttg gtgcggttgt gaatattgct tcaattgtcg gtgaaatggg gaatgccggt
     4561 cagactaatt attctgcgag caagggtgga atgattgcta tgactaaatc ttttgctaaa
     4621 gagggagcaa gtagaaattt gcgttttaat tgtgttactc caggctttat taaaagtgat
     4681 atgacagaga ttttaagcga tgaaatcaaa caagcatatc aagataatat ccctttaaaa
     4741 cgctttgcag aacctgaaga agttgcaaat tgtgtagcat ttttattaag tgattatgct
     4801 tcttatgtga caggtgatgt gcttaaaatt aatggcggat tatatatgta aggaaagtat
     4861 atggacttaa aagaaattga acaattttta gatgaaaata ctcctgcgtt tttggcaact
     4921 ttaggaactt gtggaaatcc tagggttcgt cctatgcaga gccctttgct tgtaggagat
     4981 agaatttatt tttgtacttc taataataaa ggacttttta agcatataca aaattataat
     5041 ggtattgaat tttgttcttg ttctagagag ggcgtttttt taagacttag agcaaatgca
     5101 gtttttgaac ctaacgcaaa agttaaagag ctgatgtttg aaaaatatcc ttatcttgta
     5161 agcctttatg agaatccaca aaattctaga tttgaagttt tttatcttga taatttaagt
     5221 gctaaaatgc agtttccaaa cggagatttt aaactttata aagcttaaag caaggatttt
     5281 ccttgcttta aatatccatt ttcatttgta aagcatgttc ccaaaaagca ttttctaaac
     5341 gcactacatt ataaaaaatt tcgctaagat tttcaaattt ttcttgagat atttgttgag
     5401 tataagaatt taaaaagtct tcaaattctt taatttcact ttgaaattca tctgaactat
     5461 aggttaaaat ccattcttta taagggtgat tttgaagttt ttccttgcca agtcttttat
     5521 aaatttcagc tcctatataa ccataaccta tggcacaagc acttaaagcc actaacatat
     5581 ctaaaaaatc tccactttca cccacgctta acatatagcg tgtgtaagct atattggtca
     5641 aactttcatc tttaacattt aatttatcag cattgatgcc aagttttaaa atacttttat
     5701 gaagttcaat ttctccttct ataatgtagt tttgaaattt cattgcaaag cgtagttctt
     5761 cggcattttt tgcatttaag gcaagtcgtg catagcattt agcataatgg atgagataga
     5821 tataatcttg tttgagataa aaaagaaaat tttcttcttt taaacttcca ttttctaatt
     5881 tttttacaaa ttcatgatgt aaatattcat cccaaatgtg tgaatttgtt tcaataagtc
     5941 gagaaaaaag catttcttac tcctaaaatt caatggtttt ttaaagtata gtcaaaaact
     6001 ataaatattt taagtttttt attgtaaaat acgctttatt ttaattttta tcaaggagat
     6061 atataaatgg caacatttga tgatgtaaaa gcagtggtag tagagcaatt aagcattgat
     6121 gcggatgctg ttaagatgga atcaaaaatc attgaagatt taggtgcaga ttctttggat
     6181 gttgtagagc ttattatggc attagaagaa aaattcgaag tagaaatccc agatagtgat
     6241 gctgaaaaac taattaaaat tgaggatgtt gtaaattata tcgaaaatct taaaaaataa
     6301 tttaaaaaaa ttcactttac aaggagcttg ttcttgaaaa gagttgtagt aacaggtatt
     6361 ggcatgatca atgccttggg tttagataaa gaaagttctt ttaaggcgat ttgtgaaggt
     6421 aagagtggtg tgaaaaaaat cactcttttt gatactacag actttccggt tcaaattgca
     6481 gcagaaattg aaaatttcga tcctctagaa gtagttgacg gtaaagaggt taaaaaaatt
     6541 gatcgtttta ttcaattggg cattaaagct gctcgcgaag caatgcaaga tgctaatttt
     6601 gatcaaaatt tagacaaaga agaatttgga gttgtttcag ctgcgggaat tggaggtctg
     6661 ccaaatatag aaaagaattc ggttatttgt tctgaacgtg gccctcgtaa aatttctcca
     6721 ttttttatac cttcagcttt agtaaatatg ttaggcggtt taatttctat agaacacgga
     6781 cttaaaggac ctaatatttc ttgcgtaacg gcttgtgcag caggaactca tgctataggg
     6841 gaagcatata aaagtatagc tttaggtaat gctaacaaaa tgttggtaat tggtgcagaa
     6901 gctgctattt gtcctgtagg aattggcggt tttgcttcaa tgaaagctct ttctactaga
     6961 aatgatgatc ctgctcatgc ttcaagacct tttgataaag aaagagatgg ttttgtaatg
     7021 ggagagggtg caggcgcttt ggtttttgaa gagtatgaag aggctaaaaa gcgtggggct
     7081 aagatttatg ctgaattggt tggttttgga gaaagtgctg atgcgcatca cattacctca
     7141 cctacattag atggaccttt aagagcgatg aaaaaagcct taaaaatggc aggaaatcca
     7201 aaggtagatt atattaatgc acatggaact tcaacgcccg taaatgacaa aaatgaaaca
     7261 gctgcaatta aagagctttt tggaagtgaa attccagcgg ttagctcaac aaaaggacaa
     7321 acagggcatt gtttgggtgc tgcaggagct attgaagcgg ttattagcat catggcatta
     7381 gacaatggaa ttatgccacc tactattaat caatttgtta gcgatgaaga atgtgattta
     7441 gattatatac caaatgaggc cagaaaagcg gatttaagag ttgtgatgag taattctttt
     7501 ggctttggcg gcacaaatgg ttgcgtggta tttaaaaaag tagattgata tggcttcgta
     7561 tttagatttt gaaaaaaata ttcagcaaat tgatgaagat attatcaatg ctcaaattaa
     7621 gggtgatacc gaggctgttg ctatacttaa aaaaaatctc gaaaaagaaa ttgctaaaac
     7681 ttataaaaat ttaagcgatt ttggacgctt gcaactcgct cgtcatccag atcgccctta
     7741 tgcacttgat tatatagatc ttattttaaa tgatgcttat gaaattcacg gagatcgtgc
     7801 ttttagagat gatcctgcta ttgtttgttt tatggggtat ttaggagaaa aaaaacttat
     7861 agttatagga gaacaaaagg gacgtggcac aaaagaaaag atcgctagaa attttggtat
     7921 gcctcatcct gaaggttata gaaaagcttt aagagtggca agacttgcag agaaatttca
     7981 aattcctatt ttgtttttga tagatacccc gggtgcttat ccaggtttgg gagcagaaga
     8041 acgtggtcaa agtgaagcta ttgctacaaa tttgtatgaa cttagcgatt taaaaactcc
     8101 tactatagct gtggttatag gagaaggagg aagtggtgga gctttggcta taggtgtggc
     8161 tgataagctt gcaatgatga aaaattcagt tttttctgtc atttctcctg agggttgtgc
     8221 agctatactt tggaatgatc cttctaaaag tgaagcagca acaaaagcta tgaaagttac
     8281 tgcagacgat ttaaaaagtc aaggcttaat tgatgatgtg attgaagagc ctatcaacgg
     8341 agcccatcgc aataaagaag ctgctgctgt tgctatagct gattatgtta aaaaagcctt
     8401 ggatgaatta gaaaaaatag atccgcgaga acttgcttca aatcgcatgc aaaaaattct
     8461 tcaacttgga gcttttagcg aaagctaaaa actctactta ataaaaatat tctttaaaat
     8521 ttcaaattat tctaaaaaat taaaattttg acaataaagc aaaacctaca aaaagaaaag
     8581 ttcaataaat ataagagata aataatgaat actttatatc ctttatatca caaataaaac
     8641 aatatagaag atgcaaagaa gcatttatac tttttaatgg ataaaaaata atttgac
//
LOCUS       DBBXOW010000071         8629 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.072, whole genome shotgun sequence.
ACCESSION   DBBXOW010000071 DBBXOW010000000
VERSION     DBBXOW010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8629
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.072"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..218)
                     /locus_tag="ACJE1S_001588"
     CDS             complement(<1..218)
                     /locus_tag="ACJE1S_001588"
                     /inference="COORDINATES: protein motif:HMM:NF022840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0807118.1"
                     /translation="MIHKLHIKNFKLIKDNSFDFKPLTIITGTNSCGKSSILQTLCFF
                     INTNILNIEKSMYIQNFTRNLYIFDQMR"
     gene            complement(215..1312)
                     /locus_tag="ACJE1S_001589"
     CDS             complement(215..1312)
                     /locus_tag="ACJE1S_001589"
                     /inference="COORDINATES: protein motif:HMM:NF015210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HGG0807119.1"
                     /translation="METQDSIKNFQESLYEGLEEQDDKENEIYPIKDIKIEKKSFSVY
                     EANRRIIKNDFILTPEFQRDQRWNNKQKSELIESILMGIPIPVIYAYQTGDGRLEIAD
                     GKQRLGCLNEFLEGKLILKGLKILTDCNGKKFEQLQAQEKTRIEDYQIDMYIISPQTP
                     EKIKYDIFDRVNRGGTKINNQEMRNALYNGTCTKIINKMSDYEAFKEATGNPNSKNMK
                     DRYLNLRFLSLYLCITKKIDIELFTPMDDFLAKAMRTINKKAEQDFESFLQNYEEIMK
                     FIAINYKDNLFRFKTKDIHKTNKRQLSMALFEALTSAFMYAKENNKPYPLKEQIDIFK
                     QELDKPEKITYGIDSKENIEFRINKALELIK"
     gene            1416..5228
                     /locus_tag="ACJE1S_001590"
     CDS             1416..5228
                     /locus_tag="ACJE1S_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HGG0807120.1"
                     /translation="MKFEAIDEKEFLNPYYRKKPILEAELNEFIKALKDYKTSLENNL
                     KNNEDSLVANALSKFFENLHFECEIKSIHKGNSGMDLALKKDKQIQVIVEAKLPHSKE
                     FFSQSKPNCKALHECILYYLRERKALNSSLKHIIITDFYRFYIFKADLFEELFNKNKY
                     FKEAFENFESKNSLFKGNTDEFYKECEKLLSSEKYLDSITRKDLFDEPSLKGVFIDIK
                     PILEQEKPSFSKLKPLFKIFHKDFLLSEFNPNDANSLNNAFYKELLYILGLYESKQNS
                     KLIIAKSEESKEEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFN
                     DDKNLRFLNFKKIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENT
                     LEISSLSNDLKLFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILS
                     QKELISSSVLGNVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKD
                     ISELRKSLRKEDKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFY
                     LEVQNDEILITNHKGEFIEYKRPSTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNS
                     CEITKLRLWIELLKHSFYQSFDDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLSHY
                     PNIKERMSKYKRIVKDYKEGFYTDKNLITKEIKNLQESFKNFCLKDKFNKEIKQLTNG
                     ANEYSKKYGDFLADEHHDEKFKSFFSKNMFEFSFDEKVAIKEFANLKKEYDNIFNLES
                     NHPFEWRFEFPEILDDDGNFKGFDLIIGNPPYIRQEELKELKPHLAKNYKVYKGTSDI
                     YTYFYELGFNVLKENGILSFITSNKYTRAGYGEALREFLLKNTYILKYIDLNGIKVFD
                     SATVDTSILCFEKSKSKDNKFKYLALSNEILKTCAYNIGLYKDFAEFSQNSLSKESFT
                     FSDENTSALKAKIERIGTPLKEWQGLNIYRGILTGYNEAFIITTEKRNEILANCKDEA
                     EKERTAKLIRKMLRGRDIKRYSYEWAGLWVIFIPWHFPNVEKPKTMLENEQDLKEQYL
                     SLYKHLLSHKERLSKRNKEETGIRYEWYCLQRWGANYYQEFEREKIVYPCIMAKEPCF
                     SYETSFAFAMAPANIITSNSDILKYILAFLNSDFIYLMLIKFYMGGGIEGELKTNNLE
                     KLSIPKINSKNEKLADELINLVDEILKAKEQDKNANTQELENKINSIVYKLYNLTEEE
                     IKIIENKE"
     gene            5231..5962
                     /locus_tag="ACJE1S_001591"
     CDS             5231..5962
                     /locus_tag="ACJE1S_001591"
                     /inference="COORDINATES: protein motif:HMM:NF024573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0807121.1"
                     /translation="MKLVKCKIENFRSYKNIEFKFSDLSVIIGKNDVGKSTLFDALDI
                     FFENNKALEDDVNINSSENKFSITCFFQVESEMQINIDASESERTQTSLESEYLLNQE
                     KLLQIKKIWEKGKLSKIYLVCNYPTNWEKPLIVSKIQELKKLLPEDAKVRLDIKKEIR
                     KFLFSQEKLNFTEQEIDISTKDTDIVSIYNKLKEKMPKFLLFKADRTNTDKDNEITQI
                     TKAITQNAISEIEQKFNDMKKKYFR"
     gene            6018..6986
                     /locus_tag="ACJE1S_001592"
     CDS             6018..6986
                     /locus_tag="ACJE1S_001592"
                     /inference="COORDINATES: protein motif:HMM:NF024573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0807122.1"
                     /translation="MVKDLTPDITSKELSSLFSYEFKSDNGISFNKRGSGVKRLFLLS
                     FFLEDAERKRQSNMIYAIEEPETSQHPNYQKIVIESLQKLAQNQGRQILITTHTPEIV
                     RMVNKENIIFIQKDDEDRRIVYHGDEIYTKVLADTLGILPYLLYQRVLFVEGETDVKF
                     LNNLNNKFECLRNIFDLKTITLIPLRGGGNVKNWIREDYLKQSNVKCLYFLDRDEDRR
                     DVDEQNLIRTKKREIENYYPVDILEEYFKNKLGADFVFSDNFKNNWDNEDIAEYIYNC
                     KPKKYKKECIKLMFANKEIWDKINENNMQNFDEIKEWFERMKEFFK"
     gene            7054..>8629
                     /locus_tag="ACJE1S_001593"
     CDS             7054..>8629
                     /locus_tag="ACJE1S_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HGG0807123.1"
                     /translation="MKETPKILEKCCEETHQNHKSESDGKETADIKEELSKVLSIDKR
                     YIFILDAKDTEQEAIKKIITKDELFSGNEKWYLVCGKEDSKIDILLLCDKIKDIPCNV
                     IFNNCNICLHINKPENTEKDYKGIIKNYLYFCNCTFDKLFKKSLNLKNIIFKKTLTFN
                     QCVFYSDLEIYQNQFLDHLVFINCYDKRNDKKITSLDLQENEFEGCLFIKNCAIEKIN
                     LWKNKFKNRCYFVDSNFGYKDKDNTTKLNFSNTHFKDNVYFNNSEFYSYADFHECEFD
                     DIACFYGVKFHKIPNFSACYFKEQKAVNLINVDIDKLDFKSVEKYIEDNYQDETCENK
                     QEITEEQRNNNCKLKCAKHLKDSFRVIKDVLITQNNTLEAQEWHKLELYAKEKENHIN
                     LSVKDREKNADIFKNILIWFNCVLLNVYRNTSDHHNDFLKILNFTVGMIVLYGVFIFF
                     CQACIEPYSKFFNELKSSVIFIIIGILVFLCCIMFYFNRKKSIFAKSIFFIIAMVFIV
                     LYLVTYFYKTNEYKTIL"
BASE COUNT         3355 a         1070 c         1319 g         2885 t
ORIGIN      
        1 tttctcatct gatcaaaaat atataaattt ctagtaaaat tttgtatata catagacttt
       61 tctatattta aaatatttgt atttataaaa aaacaaagcg tttgtaatat tgaagatttt
      121 ccgcacgagt ttgttccagt gattatagtt aatggtttaa aatcaaaact attatcttta
      181 attaatttaa agttttttat gtgtaatttg tgtatcattt gataagttcc aatgctttat
      241 tgattctaaa ttcgatattt tctttgctat cgataccata ggttattttt tcaggcttat
      301 caagttcttg tttaaatata tctatttgtt cttttaaagg ataaggttta ttgttttctt
      361 ttgcatacat aaatgcagaa gttaaggctt caaacaatgc catacttaat tgtcttttat
      421 ttgttttatg gatatctttg gtcttaaatc taaataagtt atctttgtaa ttaatggcaa
      481 taaatttcat tatctcttca taattttgca aaaaagattc aaaatcttgt tccgcctttt
      541 tattaatggt tctcatggcc tttgctaaaa aatcatccat aggagtaaac aattctatat
      601 ctattttttt tgttatgcaa agatataagg agagaaatct taaatttaaa tatctatctt
      661 tcatgttttt actatttgga tttcctgttg cttctttaaa tgcttcataa tcactcattt
      721 tattgataat ttttgtacaa gttccgttgt atagcgcatt acgcatttct tgattattga
      781 tttttgttcc accacgattt actctatcga aaatatcgta tttaattttt tcaggagttt
      841 gtggagatat tatatacata tctatttgat agtcttctat tctggttttt tcttgtgctt
      901 gtaattgttc aaatttttta ccattacaat ctgttaatat ttttaatcct tttaagatta
      961 atttaccttc caaaaactca tttaagcatc cgagtctttg tttgccgtct gctatttcta
     1021 atcttccatc tcctgtttga taggcatata ttacagggat aggaattccc attaatatag
     1081 attctataag ctccgatttt tgtttattat tccatctttg atctctttga aattccggtg
     1141 ttaaaataaa atcgttttta attattctgc gatttgcttc ataaacactg aaactttttt
     1201 tctcaatttt gatatctttt atgggataaa tttcattttc tttatcatct tgttcttcta
     1261 aaccttcata caagctttct tgaaaatttt ttattgaatc ttgagtttcc atacttttgc
     1321 tccttggtat ttgtaattat aacactaaat atcgaatttt gattctttaa aataaatttt
     1381 gataaaatag aaactatttt aaaaaaaggt gtaagatgaa atttgaagcc atagatgaaa
     1441 aagaattttt aaatccttac taccgcaaaa agccgatttt agaagcagag ttaaacgaat
     1501 ttattaaagc tttgaaagat tataaaacaa gcttagaaaa caatctcaaa aacaacgaag
     1561 actccctagt agcaaacgct ttaagcaaat tttttgaaaa tttgcatttt gagtgtgaga
     1621 taaaaagcat acataaaggc aacagtggta tggatcttgc tttgaaaaaa gacaagcaaa
     1681 ttcaagtcat cgtcgaagca aaattgcccc attctaaaga attctttagt caaagcaagc
     1741 ccaactgcaa ggctttgcac gagtgcattt tgtattatct tcgtgaaaga aaggctttaa
     1801 attcatcact caagcacatc atcatcacgg atttttatcg tttttatatc tttaaggcgg
     1861 atttgtttga agagcttttt aacaaaaaca agtattttaa agaagctttt gaaaattttg
     1921 aaagcaaaaa ttctcttttt aagggcaata ccgatgaatt ttacaaagag tgcgaaaagc
     1981 ttttaagcag tgaaaaatac cttgattcta tcacaagaaa ggatttattt gatgagccta
     2041 gcttaaaggg tgtttttatc gatataaagc ctattttaga gcaagaaaag ccaagcttta
     2101 gcaagctcaa gcctttgttt aaaatttttc acaaagactt tttgttaagc gagtttaacc
     2161 ccaacgatgc aaattcactc aacaatgctt tttacaaaga gcttttatat atcttagggc
     2221 tttatgagag caaacaaaac tcaaagctca tcatcgcaaa aagtgaagaa agtaaagaag
     2281 agcaaggcac tttctacacc gctataaatt ctaagcttaa agaagaaaat tttgaaacca
     2341 tcttaaaact tttgatctta tggcttaatc gcattttgtt tttaaagctt atagagtcaa
     2401 atttggtgcg ttttaatgat gataaaaatt tgagattttt aaatttcaaa aaaatccctg
     2461 attttgacaa gcttagcgaa cttttctttg aagttttagc caaagaaaaa agcacgcgaa
     2521 agaaaagcga atttgcttat ctgccttatc taaattcttc tttgtttgaa aaacaaagca
     2581 tagaaaacac acttgaaatt tcaagcttaa gcaatgactt aaagcttttt tactataaaa
     2641 acaccgtgct aaaagatgat aaatgcaagg ctaaaaaagg acaagtgggg cttttagaat
     2701 acttgtttga atttttggat agttttgatt ttggtagcga tgatgagcaa agcgaaattt
     2761 taagccaaaa agaactcata agttcaagtg ttttaggaaa tgtgtttgaa aaactcaatg
     2821 gctacaaaga aggaagtttt tacacgccaa gctttatcac ttcttatatg tgcaaagaaa
     2881 gcattacaaa agttgtgctt gataaattca acgctcaatt tgatcttgat gctaaagata
     2941 taagcgaact aagaaagtct ttaagaaaag aagacaaaaa agcacaaaaa gagcttttaa
     3001 actctataaa aatttgcgat cctgcggtgg gaagcgggca ttttttagtt tctgctttaa
     3061 atgttatgtt aagcatttat gatgagctaa atctttttga tgaagagttt tacctagaag
     3121 tgcaaaacga tgaaattcta atcaccaatc ataaaggcga gtttatagag tataaacgcc
     3181 caagtacgcc taaagataaa gcccatctta tccaacaaga actttttcac accaaaaaag
     3241 acatcataga aaacaacctt tttggtgtcg atatcaaccc taactcatgc gagatcacca
     3301 agctaaggct ttggatagag cttttaaaac atagttttta tcaaagcttt gatgatgaga
     3361 attatcacga tcttaaaacc ctgccaaaca tcgatataaa cataaaatgc ggaaattctt
     3421 tggtatctta ctttgaaaca ggcaaaagtc taagccacta ccctaacatc aaagaacgta
     3481 tgagcaaata caaacgcata gtaaaagact ataaagaagg cttttacaca gataaaaatc
     3541 tcattaccaa ggaaataaaa aatctccaag aaagctttaa aaatttttgt ttgaaagata
     3601 aatttaacaa agagatcaaa cagctcacaa atggggcaaa cgagtattct aaaaaatacg
     3661 gcgatttttt agccgatgaa catcacgatg aaaaatttaa aagctttttt tctaaaaata
     3721 tgtttgaatt cagttttgat gaaaaagtag ccataaaaga atttgcaaat cttaaaaaag
     3781 aatacgacaa tatctttaac ctagaaagca atcatccttt tgaatggcgt tttgaattcc
     3841 ctgaaatttt ggacgatgat ggaaatttca aaggctttga tctcatcatc ggcaatccgc
     3901 cttatataag acaagaagag cttaaagaac tcaagcccca tttagctaaa aattataagg
     3961 tttataaagg cacgagcgat atttatactt atttttacga gctaggcttt aatgtcttaa
     4021 aagaaaatgg aattttatct ttcatcactt caaacaaata cacccgtgca ggatatgggg
     4081 aagctttgcg tgaatttttg ctaaaaaata cttacatttt aaaatacatc gacttaaatg
     4141 gcataaaagt ttttgatagt gctacagtgg atacttccat actttgtttt gaaaaatcaa
     4201 aaagcaaaga taataaattc aaataccttg ccctaagcaa tgaaatttta aaaacttgtg
     4261 cttataacat tggcttatat aaggactttg cagaattttc gcaaaattct ttaagcaaag
     4321 aaagtttcac ttttagcgat gagaatacta gtgctttaaa ggccaagata gaacgcatag
     4381 gaactccgct taaagaatgg caaggactta atatatatcg tggaatttta acaggctata
     4441 acgaagcctt tatcatcact actgaaaaaa gaaatgaaat tttagcaaat tgcaaagatg
     4501 aagccgaaaa agaacgcacc gccaaactta tacgcaaaat gctacgcgga cgcgatataa
     4561 aaagatatag ttacgagtgg gcgggacttt gggtgatatt tataccttgg cattttccaa
     4621 atgttgaaaa accaaagaca atgctagaaa atgaacaaga tttaaaagaa caatatctga
     4681 gcttatataa gcacttgtta tcccataaag aaagattatc taaaagaaat aaagaagaaa
     4741 caggaattcg ttatgagtgg tattgtttgc aaagatgggg agcaaactat tatcaagaat
     4801 ttgaaaggga aaagatagtg tatccgtgta taatggcaaa agaaccttgt ttttcctatg
     4861 aaacaagttt cgcatttgca atggcacctg ctaatataat aacttcaaat tcagatattt
     4921 taaaatacat acttgcattt ttaaattctg attttatata tttaatgtta ataaaattct
     4981 atatgggtgg tggaatagaa ggagagttaa aaacaaataa tctagaaaaa ctttctatac
     5041 caaaaataaa ttccaaaaat gaaaaattag ccgatgaact tataaattta gtcgatgaaa
     5101 ttttaaaagc caaagaacaa gacaaaaacg caaacaccca agagttagaa aataaaatca
     5161 attccatcgt ttataaactc tataacttaa ccgaagaaga aataaaaatc attgaaaata
     5221 aggagtgaaa atgaaattag taaaatgtaa gattgaaaat tttcgaagtt ataaaaatat
     5281 agaatttaaa ttttcagatt taagtgtaat tattggaaaa aacgatgtgg gaaaatcgac
     5341 attatttgat gcactagata tattttttga aaataataag gctttagaag atgatgttaa
     5401 tattaattca agcgagaata aatttagtat tacttgtttc tttcaggttg aatcagaaat
     5461 gcagattaat attgatgcta gtgaaagcga aagaacacaa acatctttag agagtgagta
     5521 tttattaaat caagagaaat tgctacaaat caaaaaaata tgggaaaaag gaaagttaag
     5581 taaaatttat ctcgtttgta actatccaac taattgggaa aaaccactta ttgtatcaaa
     5641 aattcaagaa ttaaaaaaat tgcttcctga agatgctaaa gttagactag atattaaaaa
     5701 agaaataagg aaatttttat tttcgcaaga aaaattaaat tttacagaac aagaaataga
     5761 tatatccaca aaagatactg atattgttag catatacaac aaattaaagg aaaaaatgcc
     5821 taaattctta ttatttaaag ctgatagaac aaatacagat aaagataatg aaattactca
     5881 aataacaaaa gccattacac aaaatgctat ctctgaaatt gagcaaaaat ttaatgatat
     5941 gaaaaaaaaa tattttagat gatattaaga gttttgctaa tgcgacactt gagcgattaa
     6001 aaagttttga taaagatatt gtaaaagact taaccccaga tattacttca aaggagttga
     6061 gctcattatt tagttatgaa tttaaaagcg ataatggaat atcatttaat aaaagaggta
     6121 gtggagttaa aaggttgttt ttattaagtt tctttttaga agatgctgaa agaaaacgac
     6181 aatctaatat gatttatgca attgaagaac cggaaacatc acaacatcca aactatcaaa
     6241 aaatagttat agaatctttg cagaaattag cacaaaacca aggacgtcaa atattaatta
     6301 caacacatac tccagagatt gtaagaatgg ttaataagga aaatattatt tttatacaaa
     6361 aagatgatga agatagacga atagtttatc atggagatga aatttataca aaggttcttg
     6421 ctgatacttt aggtattttg ccgtatttat tgtatcaaag agttttattt gtagaaggag
     6481 aaacagatgt aaagttttta aataatttaa ataataaatt tgaatgttta agaaatatat
     6541 ttgatttaaa aacaataact ttgattccat tacgtggtgg aggaaatgtt aaaaattgga
     6601 taagagaaga ttatttaaaa caaagtaatg ttaaatgtct ttatttctta gatagggatg
     6661 aggataggag agatgttgat gagcaaaatc taataagaac aaaaaagcga gaaattgaaa
     6721 attattatcc tgttgatata cttgaagaat attttaaaaa taaattaggt gcagattttg
     6781 ttttttctga taattttaaa aataattggg ataatgaaga tatcgctgaa tatatatata
     6841 attgtaaacc aaaaaaatat aaaaaagaat gtataaagtt aatgtttgct aataaagaaa
     6901 tatgggacaa aattaatgaa aacaatatgc aaaattttga tgaaattaaa gaatggtttg
     6961 aaagaatgaa agaatttttt aaataaatta tattcaaaac cgtacgtaaa aattctatag
     7021 tgctaagtta aaaaagatag aaaggattaa atgatgaaag aaacacctaa gatcttagaa
     7081 aaatgttgtg aagaaacaca tcaaaatcat aagagtgaaa gtgatggcaa agaaactgct
     7141 gatatcaaag aggaattgtc caaagtttta tctatagata aacgatatat atttattcta
     7201 gatgctaagg atacagaaca agaagcaata aaaaaaataa taacaaaaga tgaattattt
     7261 tctggtaatg aaaaatggta tttagtttgt ggcaaagaag atagtaaaat agatatattg
     7321 ttattatgtg ataaaataaa ggatattccg tgtaatgtta tttttaataa ttgcaatatt
     7381 tgcttgcata taaacaagcc agaaaacaca gaaaaagatt ataagggaat aatcaaaaac
     7441 tatttgtatt tttgcaattg tacttttgac aagttattta aaaagtcatt aaatttgaaa
     7501 aatattattt ttaaaaaaac attaaccttt aatcagtgtg tattttatag tgacttagaa
     7561 atatatcaaa accaattttt agatcatttg gtttttataa attgctatga taaacgaaac
     7621 gataaaaaaa tcacatcctt agatttgcaa gaaaacgaat ttgaaggatg tctttttata
     7681 aaaaactgtg ctatagaaaa aataaatttg tggaaaaata aatttaaaaa tagatgttat
     7741 tttgtagatt ctaattttgg atataaggat aaagataata caacaaaatt aaatttttca
     7801 aatactcatt ttaaagataa tgtttatttt aataattctg aattttatag ttatgctgat
     7861 tttcacgagt gtgaatttga tgatatagct tgtttttatg gagtaaagtt tcataagatt
     7921 ccgaatttca gtgcttgtta ttttaaagag caaaaagctg taaatttaat caatgtcgat
     7981 atagataagc tagattttaa atcagtggag aaatatatag aagataatta tcaagatgag
     8041 acgtgtgaaa ataaacaaga aataacagaa gaacagcgta ataataattg taaattaaaa
     8101 tgtgccaaac atttaaaaga ttctttcaga gtcataaaag atgttttaat cactcaaaat
     8161 aatactttag aagctcaaga atggcacaag ttagagcttt atgcgaaaga gaaagaaaat
     8221 catataaatt taagcgtcaa agacagagaa aaaaatgctg atatatttaa gaatatatta
     8281 atatggttta attgtgtttt gttaaatgtg tatagaaata ctagcgatca tcataatgat
     8341 tttttaaaaa ttttaaattt tactgtgggg atgattgttt tatatggggt gtttattttc
     8401 ttttgtcaag cttgtataga accttatagt aaatttttta acgaattgaa atcgagcgtt
     8461 atctttatta tcatcggtat attagttttt ctttgctgca tcatgtttta ttttaataga
     8521 aaaaaaagca tttttgcaaa atcaatattt tttattattg ctatggtgtt tatagtctta
     8581 tatctcgtaa cttattttta taaaactaat gaatataaga caattttat
//
LOCUS       DBBXOW010000072         8566 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.073, whole genome shotgun sequence.
ACCESSION   DBBXOW010000072 DBBXOW010000000
VERSION     DBBXOW010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8566
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.073"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(30..1370)
                     /locus_tag="ACJE1S_001594"
     CDS             complement(30..1370)
                     /locus_tag="ACJE1S_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HGG0807124.1"
                     /translation="MLYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTEKNTLIWVNDQKLDPIYAAMLDGIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVSKDAKKIIKAFIVGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASGINEFLSNGSNSKVLHIANAIKNGIIVAHF
                     AKNHMSGPLSIFEGRDNIFKCFGIEEECDKTELNKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLESYENLKREEVLEFAKKIRYEKRKSQGFPKYFPGHLEASLQDGRTIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF"
     gene            complement(1379..2746)
                     /gene="purB"
                     /locus_tag="ACJE1S_001595"
     CDS             complement(1379..2746)
                     /gene="purB"
                     /locus_tag="ACJE1S_001595"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG0807125.1"
                     /translation="MTGISVFDHKLLADSWSTQDMRAVFCEENRVQKWLDVEAALAKA
                     QAKLNIIPQEAADEIAKKAYYKFMDMDFIFNEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALVKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLDVPNISWQSARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDATTYVGYAPKLVDEFLEKIKN
                     SAILK"
     gene            complement(2756..3919)
                     /locus_tag="ACJE1S_001596"
     CDS             complement(2756..3919)
                     /locus_tag="ACJE1S_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HGG0807126.1"
                     /translation="MNSKTKLIHCGRGDQNVEVRSVNPTLMRASTILFKDHATWQKYR
                     ELRKTDRVLSYGARGTTTNFELEKLICSLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLEKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYE
                     IIDLPKLCKIAHSHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGV
                     VVINEKEWKNFDKLPEALGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQTR
                     KEIKTIFYPKLKTHPNHEIFMRDHKGANGMVTIEFAEGYSKEDAIKFVDELEYFSIGA
                     SWGGYESLATVTTPPRTATDWSKRGPFVRFHIGLEDTKDLIADLAKAFDSIKK"
     gene            complement(3931..5370)
                     /gene="dcuC"
                     /locus_tag="ACJE1S_001597"
     CDS             complement(3931..5370)
                     /gene="dcuC"
                     /locus_tag="ACJE1S_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HGG0807127.1"
                     /translation="MLGIVFSLFSVFLLVFMLYKKINAHMALLLSGLLLLSLAAIFGL
                     SPHIVAKGSLNLGFFDIFQVFNQTMSNTLAGLGLTLMTIAGFSAYMDHVGASYALFKV
                     FEKPLKAVKSPYILLIVAYFIVQFLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSAL
                     SVIGICQYIDHGPGSGNVIMASKVAEVDPAIYFVHYQLPTTLPIIIAVGIAIYLCNKF
                     FDKKDNFVFNAQEIEKELNENEGKEKELKKPPRIYAILPIIPLVLILGFSSVLDSILV
                     LMGISSAEEVKAAASTAIEMNVPVAMVISTFVAIIFEMIRYKSIVETLNSIMIFFKGM
                     GHLFVITVSLIVCGQVFASGLLSVGFVDTLIEFCKNAGFGVLAIIIAVSILLAVCAFL
                     MGSGNAAFFSFAPLIPNIAKHFGVETITMIAPIQIMTGFGRCVSPIAPAILAISAIAK
                     VSPFAVVKRTAIPMLVAAIVNIIMTYIYL"
     gene            complement(5374..5736)
                     /locus_tag="ACJE1S_001598"
     CDS             complement(5374..5736)
                     /locus_tag="ACJE1S_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG0807128.1"
                     /translation="MSNYPKAIGPYSAYREANGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDIPKGAKVEIEIIAQKG"
     gene            5912..6580
                     /locus_tag="ACJE1S_001599"
     CDS             5912..6580
                     /locus_tag="ACJE1S_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HGG0807129.1"
                     /translation="MDEKQKEQFIKLTNFLGQVLGKQYEVVFHVLSKEGAYIAAIANS
                     HVSGRTLESPLSAFASELVQNKAYLKEDFLCDYKALIGKSKLVRGSTFFIKNSDELVG
                     ILCINHDTSMMRDLVCRIIDIEKLGDMSEFLNQDKENNTSVDSLGNIETLSHSIEEIL
                     AQSIDMNYLNSDYQLSMAQKEEITKTLYQKGIFNIKGSVPIVARLLKISEPSVYRYLK
                     NFKS"
     gene            complement(6584..7051)
                     /locus_tag="ACJE1S_001600"
     CDS             complement(6584..7051)
                     /locus_tag="ACJE1S_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HGG0807130.1"
                     /translation="MMTLSLEEEKRFAELCKMAFNFARNNEYENLKIMIEAGLNVNLK
                     THKGDTLLMLAAYNNSYECAKMLLEKGALVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYSFAIMFGRKDVAEFLLKSSKKSLSKRLSLGILKLFKK"
     gene            complement(7108..8532)
                     /locus_tag="ACJE1S_001601"
     CDS             complement(7108..8532)
                     /locus_tag="ACJE1S_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HGG0807131.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSAAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTLQGI
                     KNLSNKEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDADKLGFNPFDLT
                     KIWPHSVVPLMDIGEMILNQNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRARSEVNTYNVAGAMNFDSYRNGAAYYEPNSYEESPKEDK
                     SYLEPDLVLKGNAQRYAPLDDDFYTQPRALFNIMNQNQKEQLFENIAASMEGVEEKII
                     TRALGHFEKISPDYAQGIKKALGK"
BASE COUNT         2765 a         1488 c         1318 g         2995 t
ORIGIN      
        1 atccttcttg taaaaagaag gataaatatt taaaaagaaa agtggtttaa attttctaga
       61 ttgatgattt gatctagaat tttgttagct ttagcattat caaggtaaat ttgtgcattg
      121 gctaaaaatt tagcttttaa ttcttcaaaa cttaatggat tatcaaaatt acctttattt
      181 ataaaaacat ctttttggat tgtgcgtcca tcttgcaaac tggcttctaa atgccctgga
      241 aaatactttg gaaagccttg agattttctt ttttcgtacc tgattttttt agcaaattct
      301 agtacttctt cacgctttaa attttcataa gattcaagag tgattttacc atcaaagaat
      361 cctagagcca ttaaaaaagg catggaaaat ttagcttcat aagcactatt tggagtgtat
      421 tttgcttcta aaggatcgca gataaaagaa ataggaactt catctacaaa acaatgaata
      481 cttttaattt catcagcttt taaaccatca ttttttaaag caatagcaca atcaataagc
      541 ccatgagcaa aatgacaact tggataaggc ttgattgaaa cttgcatagt ttgccaaatt
      601 tctcctaagg ctttgttaag ttctgtttta tcgcattctt cttctatgcc aaaacattta
      661 aagatattat ccctaccttc aaaaatactc aaaggtccac tcatatggtt tttagcaaaa
      721 tgagctacta taataccgtt tttaatagca ttggcaatat gcaaaacttt tgaattagat
      781 ccattggata aaaactcatt aatcccactt gcaaaacttc ctgcaagtcc taaagcattg
      841 atgatttgtt ctttgttaag atctagcaag attgcacttg cacttacgct tccaaaaatt
      901 cctgcaatag cagtggtatg aaaaccacgc ttatgaaaag tacctttgct tgcaatgcct
      961 actctagctg caatttccca gcctactata aaagctttga tgattttttt cgcatctttg
     1021 ctaacatgaa aaccataact taaacaaagt ggagttaaaa ttgcacttgc atgcaaaatc
     1081 gcttctgtat gtgtatcatc aaaatcaagt gcatgagaag caatgccatc tagcatggct
     1141 gcgtatatag gatctaattt ttgatcattt acccaaataa gagtattttt ttctgtgctt
     1201 aaattttcaa aagctttaaa agcatttaaa acacattctt ctttgcttgc tgctatagct
     1261 gttccaaggc tatcaagcat aagttcttta gctctttgaa caactgtatt agggatattt
     1321 tcatatttaa gattgaaaat aaaatccgct aaaatttcgc tatataacat cgtttttcct
     1381 attttaaaat agcactattt ttgatttttt ccaaaaattc atctacaagt tttggtgcat
     1441 atcctacata ggttgttgca tcaagcaaag catcgatttc tttttctttc aataccttag
     1501 atactctttt atctgcaagt aaaacttctt taaaagtttt ttgtttttcg atacctagca
     1561 tagcattttc ataaacaatc tcatgggcgt gttgttttcc ataatgatcg cttaatgcaa
     1621 acataacacg ctctgctaaa acaaaaccat taagagtatt taaattttta agcattttgt
     1681 ctttttttac ttctaaatca ctaagagcga atttcatatt tgctaaaacc acagaaagca
     1741 ttaaaaacat ttcaggtaaa agcttccatt ccattttcca aacttgacca tctctttcat
     1801 gttcatgtct ttcaatatcg cttaaaatgg ctaaatttgc cttaaaggca ttgcttactg
     1861 taactgcatt ttcgcttact gcaggatttc ttttgtgtgg catagtgctt gatcctactt
     1921 gtcctttgcc aaaaggttca gcaacttcat caatttcatt atgtgaaagg attaaaattt
     1981 catgagcgat tttgttaaag gttgcgttga tattgcctag tacaaaacca agttctataa
     2041 agcgatcacg tgcgctctgc caagaaatat taggcacatc aagtcctaaa ttttctaaag
     2101 tgagtttttc tacttcattg cactcatcac ttaaacttgc tttagttcct acagcgccta
     2161 ctatactgcc tacataaagt cttttttcaa gttcaagtat tctttcaaaa tgacgctcaa
     2221 gttcgcttaa ccaaatagcc actttatgtc caaaagtaat aggcaaagcc tgaagtgcta
     2281 aagttcttcc catcatagca gtatttttgt gtgttttagc aagttttact aaagcttttg
     2341 caatggcttt taattcgctt tttacaagag tcatagcttc tttaaattgc aaaacaagtc
     2401 ctgtgtcaat gatatcttga gtggttaccc caaaatgtac atattcgcct agattattat
     2461 cgcaagcttt ttctaatccc ctaacagtag gaactaaagg atgtttggtt tttttaaatt
     2521 cattaaaaat aaaatccata tccataaatt tataataagc tttttttgca atttcatctg
     2581 ctgcttcttg agggatgata ttaagttttg cttgtgcttt tgctaatgct gcttcaacat
     2641 caagccattt ttgtacgcga ttttcttcac aaaaaacagc acgcatatct tgcgtgctcc
     2701 atgaatctgc taataattta tgatcaaata cgctaattcc agtcatttta tttccttatt
     2761 ttttaatact atcaaaagcc ttagctaaat cagcaatcaa gtctttagta tcttcaagtc
     2821 ctatatgaaa tcttacaaat ggacctcttt tgctccagtc tgttgcagtt cttggtggag
     2881 tagttacagt tgctaaactt tcatagccac cccagctagc acctatagaa aaatattcta
     2941 actcatctac aaatttaata gcatcttctt tactataacc ctctgcaaat tcgatagtaa
     3001 ccataccgtt agcaccttta tgatcgcgca taaaaatttc atggtttgga tgggttttga
     3061 gttttggata gaaaatagtt ttaatttctt ttcttgtttg taaaaactct acgatttcat
     3121 ctgcactttt ttcatgagct ttcattctta catctaaagt tctcatacca cgaagaacta
     3181 aataagcatc atcagggctt gttgtaaagc ctaaagcttc agggagtttg tcaaaatttt
     3241 tccattcttt ttcattgata accactacac ccatggtaac atcagagtga ccgctaagat
     3301 attttgtcgc agctataacc gaaatatcta cgcctagctc aagtggattt aggaagtatc
     3361 cgcttgaata agtattatca atagctacag gaatattatg agagtgtgca attttgcaaa
     3421 gctttggtag atctataatc tcatataaaa ttgatcccgg cgactcacat aaaataagct
     3481 tagtattagg cttgattttc tcctccacat cacttgcatc agcttttaag aaatcaatct
     3541 caacgcccat tttttctaaa aataattcac aaattgttct tacaggccca tagattgcat
     3601 cagtaattaa aaaatgcgca tccttacttg catagtttaa aagtaccata gcaagtgctg
     3661 caagtcctgt tgggaaaagt tgagctctgt agccgccttc taagctgcag ataagttttt
     3721 caagttcgaa gttagttgtc gttcctctag caccatagct taatacacga tcagtttttc
     3781 ttaattctct atatttttgc caagtggcat gatctttaaa aagtatggtt gatgcacgca
     3841 taagtgtagg attgactgat cttacttcaa cattttgatc acctctaccg caatgaataa
     3901 gtttggtttt tgagttcatt ttgtctcctt ttaaagataa atataagtca taatgatatt
     3961 tacaatagcc gctacaagca taggaatagc tgttctttta actacggcaa aaggactgac
     4021 ttttgcaata gctgaaatgg ctaaaatagc aggtgctata gggctcacac atcttccaaa
     4081 gcctgtcatg atttgaattg gtgctatcat ggtgatagtt tcaactccaa agtgttttgc
     4141 tatatttggg ataagtggag caaagctaaa aaatgctgca tttcctgaac ccattaagaa
     4201 agcacaaact gcaagcaaga ttgaaacggc gataataata gccaaaactc caaatcctgc
     4261 atttttgcaa aattctatta aagtatctac aaaacctaca gataaaagac cacttgcaaa
     4321 tacttgaccg caaacgatga gtgaaactgt gataacaaat aaatgtccca ttcctttaaa
     4381 gaaaatcata atagaattaa gagtttctac tatactttta tagcgtatca tttcaaaaat
     4441 aatagccaca aaagttgaaa tcaccattgc tactggaaca ttcatttcaa tggcagtgct
     4501 agcagctgct ttaacttctt cagcgctact tattcccatt aaaaccaaga tgctatcaag
     4561 cacggaacta aatcctagga ttaaaaccaa aggaattata ggtaaaatcg cataaattct
     4621 aggaggcttt ttaagttctt tttctttacc ttcattttca tttagttctt tttcaatttc
     4681 ttgtgcattg aagacaaaat tatctttttt gtcaaaaaat ttattgcaaa gatatatcgc
     4741 aatacctaca gctataatga taggcaaggt tgtagggagt tgataatgaa caaaataaat
     4801 tgcaggatca acttcggcta cttttgatgc catgatcaca tttccacttc caggtccatg
     4861 atcgatatat tgacatatac caattacact tagggctgaa agttttgaaa caccagagcg
     4921 tacaagtata gggtacatag taaccataag taaaagtgcc aagcctgcgt gagaagggat
     4981 gaaaagaact aaaaattgca cgataaaata agcaactatg agtaaaatat aaggagattt
     5041 tacggctttt aaaggttttt caaaaacttt aaaaagtgca taagaagccc ctacatgatc
     5101 catataagca gaaaaacctg ctatagtcat aagtgtaagt ccaagccctg ctaatgtatt
     5161 tgacatggtt tgattgaaaa cttgaaaaat atcaaaaaaa cctaaattta aagaaccttt
     5221 agcgacaatg tgtggagaaa gtccaaaaat agcagctaag gaaagtaaaa gtaaaccact
     5281 taaaagcaaa gccatatgag cattgatttt tttataaagc ataaaaacaa gtaaaaaaac
     5341 actaaataaa gaaaaaacaa tacctagcat gttttatcct ttttgagcga tgatctctat
     5401 ctctacttta gctccttttg gtatatcttt tactgcaaaa gcacttcttg ctggataagg
     5461 agctttaaaa aattcagcat aaatttcatt aaatgctaca aaatcattaa tatcagctaa
     5521 aaagcaagtg gttttaatca ctttatcata actgatacca ttttcttcta agatagcacc
     5581 gatatttttt aaagattgtt tggtttgttc tttgatatca gagctttcta tttctcctga
     5641 agcagggttg ataggaagtt gtcccgagat aaaaagcaaa ccgtttgctt ctctataagc
     5701 tgagtaaggg ccgatagcct ttggataatt tgacattttc tctccttttt tattaatgta
     5761 aattaaataa acgtatttta tcacgataat aataatttgt caatatttta ttatcacgat
     5821 aataaaatat tatctttaag aatattttta aaaaattaaa gttaaaattt aagctttgga
     5881 ttctaaattt tattatttta ggaatatttt catggatgaa aaacaaaaag agcaatttat
     5941 aaagctcacg aattttttag gacaagtttt aggtaagcag tatgaagtgg tttttcatgt
     6001 tctttctaaa gagggtgctt atatagcagc tattgcaaat agtcatgtca gcggtagaac
     6061 tcttgaatct cccttgagtg cttttgcaag tgaacttgtg caaaataagg cttatttaaa
     6121 agaagatttt ttgtgtgatt ataaggcttt gattggaaaa tcaaaacttg ttagaggttc
     6181 gacatttttt ataaaaaatt ctgatgaatt ggtaggaatt ttgtgtatca atcacgatac
     6241 gagcatgatg agagacttgg tttgtaggat tatagatata gaaaaattag gcgatatgag
     6301 tgaattttta aatcaagaca aagaaaataa taccagtgta gatagtttag gaaatataga
     6361 aaccctaagt cattctatag aagaaatttt agctcaaagc attgatatga attatttaaa
     6421 ttcggattat caacttagca tggcacaaaa agaagagatt acaaaaactt tatatcaaaa
     6481 gggtattttt aatatcaagg gttctgtgcc tatagtggct agactcttaa aaatttcaga
     6541 gcctagtgtc tataggtatt taaaaaattt taaatcatag aaattatttt ttaaataatt
     6601 ttaaaattcc taaagaaagg cgtttactta agcttttttt agagcttttg agtaaaaact
     6661 cggctacatc tttacggcca aacatgatag caaaactata aggtgtcata cctaagccat
     6721 tattttcatc tatatttgct ccatatttta ctaaaagctc gcacataggt aaatagccct
     6781 taaagcaaac tcctgctaaa ggtgtttgtc ctcgatcatt tttttcatca acaagcgcac
     6841 ccttttctaa aagcattttt gcgcattcgt aagaattatt ataagctgca agcataagca
     6901 aggtatcgcc tttatgtgtt tttaaattca cattcagtcc tgcttctatc atgattttaa
     6961 gattttcgta ttcgttattt ctagcaaaat taaaagccat tttgcaaagc tcggcaaatc
     7021 ttttttcttc ttctaagcta agtgtcatca tcgtttttcc tttgtttata atctttagtt
     7081 tgccacctaa aaagtggcaa gtaaaaatta ttttcccaaa gcttttttaa taccttgtgc
     7141 ataatcaggt gaaatttttt caaaatgtcc taaagctcta gtaatgattt tttcttccac
     7201 accttccata gaagctgcta tattttcaaa aagttgttct ttttggtttt gattcatgat
     7261 gttaaataac gctcttggtt gagtgtaaaa atcatcatct aaaggagcat atctttgcgc
     7321 attacctttt aaaactaaat caggttcaag atagcttttg tcttcttttg ggctttcttc
     7381 atagctgttt ggctcataat acgcagcacc atttctatag ctatcaaaat tcatagcacc
     7441 tgcaacattg taagtattta cttcacttct agcacgattt acaggtaaaa gatgataatt
     7501 agttcctatt ctatatcttt gtgcatcagg atatgagaaa attctagctt gtagcatttt
     7561 atcaggacta aaacctatac caggtactat attgcttggg ctaaaagctg cttgttctac
     7621 ttcattaaaa taattttgtg gattttgatt taagatcatt tcgcctatat ccattaaagg
     7681 cactacgcta tgtggccaaa ttttagttaa atcaaaagga ttaaagccta gtttgtcagc
     7741 atctttttca gcaagaattt gaacttgaac tttccatttt gggaaatctt tattttctat
     7801 agcattgtaa agatctcttt ggtggctttc tctatctttg gcgataagtt cagcggcttc
     7861 tttattgcta agatttttaa taccttgtag ggttttaaaa tggaatttca cccaaaatct
     7921 ctcgtttttg tcattgataa agctataagt atggcttcca aaaccatgca tatggcgata
     7981 acttgccgga attcctctat cgctcataag aatagttact tggtgtaagc tttcaggaca
     8041 caaactccaa aaatcccaag cggcattatt acttcttaag tgcgttcttg gatctctttt
     8101 ttgagtgtgg ataaaatcag gaaatttata agcatcacgg atgaagaatg ttggggtatt
     8161 gtttcctact aaatcccagt ttccttcttt ggtataaaat ttaatagcaa aacctctaac
     8221 atcgcgttca gcatcggctg cacctgcttc gccagctact gttgaaaaac gcaaaaacaa
     8281 tggagtaact tcaccttttt gaaaaatttt agctttggta taagcactta aatctgctgt
     8341 aatttttatt tcgccataag ctgcgcttcc ttttgcatgc actgttcttt ctggaattct
     8401 ttctctattt tgatgagcaa gtttttcaag taaaagataa tcttgcataa gtaaagggcc
     8461 ttttgcacct gcgcttaaag agttttgatt atcggctata atgtttccga agtcgttagt
     8521 taattttttc attattttct cctaaataat aatttttatt agttga
//
LOCUS       DBBXOW010000073         7900 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.074, whole genome shotgun sequence.
ACCESSION   DBBXOW010000073 DBBXOW010000000
VERSION     DBBXOW010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7900
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.074"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            48..923
                     /gene="cmoB"
                     /locus_tag="ACJE1S_001602"
     CDS             48..923
                     /gene="cmoB"
                     /locus_tag="ACJE1S_001602"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HGG0807132.1"
                     /translation="MQENPLEKQFLNHPLFSKIQNLKEVELDSKLYLEDSVTLKTNSQ
                     AKKEILELTKELKPWRKGPFKIDELFIDTEWQSFIKFNILKPFMSEISQKCVADIGCN
                     NGYYMFKMLEFNPKKLIGFDPSIKYRLQFELINTLAKTPIKYELLGVEDLPKYGLKFD
                     VIFCLGVIYHRSDPIKMLKDLKAGLNKNGTVFLDTMYIEDPREIALVPNKTYSKIPNI
                     YFVPSISALKNWCERAGFKYFEVLATKTTDENEQRKTEWIDSFSLENFLDPNDKNLTI
                     EGYEAPKRVYVRIKV"
     gene            1000..1575
                     /locus_tag="ACJE1S_001603"
     CDS             1000..1575
                     /locus_tag="ACJE1S_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HGG0807133.1"
                     /translation="MAKKDIFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     ELDKNFAKSILITTSDMVVDEQGLVFDAFIFAAANYVAQASINKEFSVVIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEATIQVVSIDEHIFKLKRPPL
                     NTAKAAENPDSPTSTVNPEAIGSALSASLRK"
     gene            complement(1580..1753)
                     /locus_tag="ACJE1S_001604"
     CDS             complement(1580..1753)
                     /locus_tag="ACJE1S_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807134.1"
                     /translation="MKKYILMLALLFGISGCFVNERGISNRFYDDCHEYYDASGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(1763..2290)
                     /locus_tag="ACJE1S_001605"
     CDS             complement(1763..2290)
                     /locus_tag="ACJE1S_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HGG0807135.1"
                     /translation="MRINYKKLFNLRKIASDPKKLLAFLIFALMIAFVQNYIVQNPSF
                     KAQVIRVIDGDTIEISTNNKTSKIRFFGIDAPELKQNFGKKSKAALEKILKDKEVYIF
                     SKNKDNYGRIVAIVKLKDVDINQFLVSQGYAWADTYYTNAYIKEQEKAQKNKLGLWKD
                     DNPIEPYKWRKQNRF"
     gene            2346..3621
                     /locus_tag="ACJE1S_001606"
                     /pseudo
     CDS             2346..3621
                     /locus_tag="ACJE1S_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
     gene            complement(3604..4851)
                     /locus_tag="ACJE1S_001607"
     CDS             complement(3604..4851)
                     /locus_tag="ACJE1S_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0807136.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDTFW
                     MQINAYIAFGAAYLARPFGSIVMAHFGDRYGRKNIFYISMLFMVLPSFALVFLPSYES
                     IGILATLILFLIRILQGLAVGTEVSGAWVYVSEFVKGRQVPLALGFISATLTIGLLLG
                     NLATLGIRSYFSAQEVEEYAWRIPFIVGGFFGFFALFLRTKLSETPEFERIKKENRLL
                     NFPLKDALKTYKTSMLVCFLMTVVLTSGVATLMILPKYLEELLSINKTSALWIQNFAI
                     LAVILGALIQGILASKWGSYRICSIFSITFMFFGMLFSFYDANFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYALLGFLTPFIVNAFYKEYMGVYLMVVGCCS
                     LFSVFLLKRIFARSEAKELSIVF"
     gene            complement(4894..5733)
                     /locus_tag="ACJE1S_001608"
     CDS             complement(4894..5733)
                     /locus_tag="ACJE1S_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HGG0807137.1"
                     /translation="MKKMLLSIFTTFVAVFLAACGGNSDSGASNSLERIKQDGVVRIG
                     VFGDKPPFGYVDEKGVNQGYDIVLAKRIAKELLGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPERAEQVDFCLPYMKVALGVAVPQDSNISSIEDLKDKTLLLNKGTTAD
                     AYFTKEYPDIKTLKYDQNTETFAALIDQRGDALSHDNTLLFAWVKEHPEFKMAIKELG
                     NKDVIAPAVKKGDKELKEFIDNLITKLGEEQFFHKAYDETLKSHFGDDVKADDVVIEG
                     GKI"
     gene            5931..7034
                     /locus_tag="ACJE1S_001609"
     CDS             5931..7034
                     /locus_tag="ACJE1S_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_057993207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="JlpA family lipoprotein adhesin"
                     /protein_id="HGG0807138.1"
                     /translation="MKKSIALTLGTIFFFSACSNSLDKTTVAKYEERLNTQINETLKD
                     FQQDMGVRIEISNFSCKGDGMFLRCSSPNFNVFAKDNTQTEQKLIEAKNLEIYSNEIY
                     TGEEQGLISLKDYYDNLLSKNKNLKTSFTLEGFKLGEKVISDINASLSQSDPKIQDYL
                     AKLSSGVFTLSFENSLFVKNSDYNNNFNMKINNQDLNFDMNLNFDYKQSLLDFFEKAG
                     IKYNTQTYAIDEKAVEELLDQQGFAQPIQESVILNNFKINSSLDTQGVFENYITIAKG
                     GLEALKIQSQNEEQTLLIDKALLALNEITKDEVYKLDLEAKFKPIALSDYPKEGINAV
                     EKLTVNNQDFTETLRILFGFMMIPIMLGGATGF"
     gene            7144..7884
                     /locus_tag="ACJE1S_001610"
     CDS             7144..7884
                     /locus_tag="ACJE1S_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HGG0807139.1"
                     /translation="MKILFSPSESKNDTCKEKPIDKSSFIFENLFDFRMQAVKKYEEY
                     INNADLKALQELFGIKNENEISNFQRDLKNSPTQQAITLYSGVSYEYLNFDILDKESQ
                     KYILENTLIFSNLFGVVKASDHLPFYKFKQGAKINNFALEKFYKEHFSKALDEYLKNE
                     ELLDLRAGFYDKFYTPKRKFSTYKFIKKGKVVSHFAKAYRGILLALCARIKAKNNAEI
                     LNHLPSNLSLKEIQNKGLKEEIVLEILD"
BASE COUNT         2971 a         1261 c         1163 g         2505 t
ORIGIN      
        1 caaattgttt ttgttattat tctaaaatta gattatcaag gaaaaatatg caagaaaatc
       61 cacttgaaaa acaattttta aatcatcccc tattttctaa aattcagaat ttgaaagaag
      121 tcgaactgga ttctaagctt tatttagaag atagtgttac cctaaaaaca aactctcaag
      181 caaaaaaaga aattttagaa ctcacaaaag aattaaaacc atggagaaaa ggtcctttta
      241 aaatagatga actttttatc gatacggaat ggcaaagctt tattaaattc aatatcttaa
      301 aaccctttat gagtgaaatt tctcaaaaat gtgttgctga tattggttgc aataatggct
      361 attatatgtt taaaatgctt gaatttaatc caaaaaaact tataggcttt gatccttcaa
      421 tcaaatatcg cttacaattt gaactcataa atactcttgc taaaactcct ataaaatatg
      481 agcttttagg cgtagaagat ttgccaaaat atgggttgaa atttgatgtg attttctgtc
      541 ttggagtgat ttaccacaga agcgatccca taaaaatgct aaaagattta aaggcgggat
      601 taaataaaaa tggaactgta tttttagata ccatgtatat agaagatcca agagaaattg
      661 ccctagttcc taataaaacc tattctaaaa tccctaatat ttattttgtt cctagcatta
      721 gcgctttaaa aaattggtgt gaaagagcag gatttaaata ttttgaagtc ctagctacaa
      781 aaacaacaga tgaaaatgaa caaagaaaaa cagaatggat tgattctttt tctttggaaa
      841 attttttaga tccaaacgat aaaaacctca ctattgaggg ctatgaggca cctaaaagag
      901 tctatgttcg cataaaggta taaatttttt aattactaag ccgatatagc atcaagaaat
      961 gttttgaagt agataatata gaacaccaaa ggcgcaaaaa tggcaaaaaa agatattttt
     1021 gaagaatatg cacaacttga agaatatgca tccgctgagg atatctctcg tgtaagagct
     1081 gaacttttaa cttgtccaga actcaatacc tccttagcag gaactattat cgagcttgat
     1141 aaaaattttg caaagtcgat actcatcact acaagcgata tggttgtaga tgaacaaggg
     1201 ttagtttttg atgcttttat ttttgctgct gcaaactatg tcgcacaagc ttcaatcaat
     1261 aaagaattct ctgttgttat cggttcaaaa tgtttctttt atgctccact taaattaggc
     1321 gatgttttag aacttgaagc tcatgcttta tttgatgaaa cttctaaaaa gcgagatgta
     1381 aaagttgtag gacatgtaaa agagattaaa atgtttgaag caaccataca agttgttagt
     1441 atagatgagc atatatttaa actcaagcga cctcctctta atacagccaa agcagcagaa
     1501 aatcctgatt ccccaacaag cacagtaaat cctgaagcga taggatcagc attatcagca
     1561 tctttacgca aataaatcat caaggagtca ttttaatatc tacccaattt ttagggcagt
     1621 ccttatgata agttccactt gcatcataat attcatggca atcatcataa aaccgatttg
     1681 aaatgcctct ttcatttaca aaacatcctg atattccaaa aagcaaagct agcattaaaa
     1741 tatatttttt cattacctgc ctttaaaatc tattttgttt gcgccattta taaggctcta
     1801 ttggattatc atctttccaa agacccagtt tatttttttg agctttttct tgctctttaa
     1861 tataagcatt ggtgtaatat gtatccgccc aagcatatcc ttgactcact aaaaactgat
     1921 taatatccac atctttaagc tttacaatag cgacaattct accataatta tctttgtttt
     1981 tagaaaaaat ataaacttcc ttatctttta aaattttctc aagtgctgct tttgattttt
     2041 tgccaaaatt ttgctttaac tcaggcgcat ctatgccaaa aaatcgtatt ttactggttt
     2101 tattgttggt actaatttct atggtatcac catcaatcac cctaatcact tgagctttaa
     2161 aactaggatt ttgtactata taattttgta caaaagcgat cattaaagca aaaatcaaaa
     2221 atgctaaaag tttcttagga tcgcttgcaa tttttcttaa attgaataat tttttataat
     2281 ttattctcat tatttcctta aatttttaaa aatatgccat aattttaaca aaaaaaggag
     2341 atggaatgca aaatgttata gaaaatttta aaaatttgtg caagattcca cattgtagct
     2401 atcaaacaga acaaatgaaa gaatttttaa gctcctatgc taaagataaa ggctttaaag
     2461 taagcataga taaagcagga aatattcacg ctattaaagg aaatcctaaa atttgcctcc
     2521 aaagtcatta tgatatggtt tgcatgggag aagctccaaa agtagaagta tatgaagaaa
     2581 atggcttttt aagagctaaa aattcaagtc ttggagcgga taatggcata ggaatagcca
     2641 ttatgatgag cgctatggct gaatttgaaa atctagaatg cctttttaca aatgatgagg
     2701 aagtcggact catgggagta aattcactcg agcacacttt aagttccaaa atgcttttaa
     2761 atttagacca tgaaagcgat gatgagatca tgataggttg tgcaggtgga gtagatatag
     2821 aagctgagct aagctttagc actcttaaag caagaggtaa aatttatgaa cttcaagcac
     2881 aaaattttaa aaaagggggg ggggcattca gggatcaata tcgtgcgcaa tgaaaaaagt
     2941 tctatcaagg aaatggctca atttatcaaa gaaaataaag gaaaaatcat ctcttttgaa
     3001 ggtggagaaa ggataaattc tatccctaag catgctaaag ccttggtgca ttttgaaaat
     3061 gaagtaaaag gcaatgggtg gataaaatgc gaatttaaag aagaaggtga atttgaaatt
     3121 tgcgatcaaa atgaaaagct tttaaatacc atcaatgctt tcgcacatgg agttagagct
     3181 tatgatgaac atttgagcat agtgcaaact agcatcaacc tagccacttt aaaaatggaa
     3241 aatcaacaaa tcaaatttac actttttgca agatctaata tattagatgg tttaaaacag
     3301 atagaatttg aaaccatgga attttttaaa gcttttggct ataaagtaag aagttttaat
     3361 ttttatcccc cttgggaagg caaagctaat gcactgagcg ataaagtact aaaagctctt
     3421 aaaaaagtat cgcccaaagc tagagtttcg gctatccatg caggattaga atgcggcatc
     3481 atagaaaaaa aacaagaact tttatgtgct tctatagggc caaatatcca caatccccac
     3541 tcaactgatg agcactgcga aatcacttcg gtagaaaaaa tatctagagt tgtttttgaa
     3601 gttttaaaag acaatgctta gttcttttgc ctcgctcctt gcaaaaatac gcttaagtaa
     3661 aaatacgcta aataaggagc agcatcctac caccataaga tagacaccca tatattcttt
     3721 ataaaaagca ttgactataa aaggggttaa aaaacctaaa agtgcataag aaatattata
     3781 agcaaagcta agtccactga atttaagttc acttttgaaa atttgagtca taaaaacagg
     3841 agcaaaagta ataattcctt gagcaaaaca agcaagtaaa aaataaaata agaaatttgc
     3901 atcataaaaa ctaaaaagca tgccaaaaaa cataaaagtt atgctaaaaa tagaacaaat
     3961 tctataactt ccccacttgc tagccaaaat tccttgaatc aatgccccta aaataacagc
     4021 caaaatagcg aaattttgta tccataaagc cgaggtttta tttatagaca ataactcttc
     4081 aagatatttt ggaagtatca tcaaagtcgc tacaccactg gttaaaacaa cggtcattaa
     4141 aaagcatact aacatgcttg ttttataagt tttaagtgcg tcctttaaag gaaaatttaa
     4201 aagtctattt tcttttttta ttctttcaaa ttcaggagtt tcgctaagtt ttgttcttaa
     4261 aaataaggca aaaaatccaa aaaatcctcc tacaataaaa ggaattctcc aagcatactc
     4321 ttcaacctct tgcgcgctaa aataagatct tatccctaaa gtggcaagat ttcctagcaa
     4381 taaacctata gtcaaagttg ctgaaataaa acctaaagct aaaggaactt gacgcccttt
     4441 aacaaattca cttacatata cccaagctcc acttacttct gtccctacag ctaagccttg
     4501 taaaatgcga attaaaaata aaatcaatgt agcaagtata cctatactct catagcttgg
     4561 caaaaacacc aaagcaaaac taggcaaaac cataaaaagc atagatatgt aaaaaatatt
     4621 tttacgcccg tatctatcgc caaaatgcgc cataacaata gatccaaaag gacgcgccaa
     4681 ataagcagca ccaaaggcta tataagcatt tatttgcatc caaaaagtat cattttgagg
     4741 aaagaaaacc ttagcaaaaa tatccaaaaa aaaggcaaag agcacaaaat cataaaattc
     4801 taaaattccg cccaaagaag cataaattat atttttgtat tttttttgca tattttatcc
     4861 taaatcaact aaagggcaaa agcccttttt ttgttaaatt ttaccgcctt caataactac
     4921 atcatcggct tttacatcat ctccaaaatg actttttaaa gtttcatcat aagctttatg
     4981 gaagaattgt tcttctccta attttgtgat tagattatca ataaattctt taagctcttt
     5041 atcacctttt ttaacagcag gagcaattac atctttattg cccaattctt taatggccat
     5101 tttaaattca ggatgttctt ttacccacgc aaaaagcaaa gtattgtcat gacttaaagc
     5161 atcacctctt tgatctatta aagcggcaaa agtttcggta ttttgatcgt attttaatgt
     5221 tttaatatca ggatattctt ttgtaaaata cgcatcagca gtagttcctt tgtttaaaag
     5281 taaagtttta tcttttaaat cttctatgct actgatattg ctatcttgag gcacagccac
     5341 acctaaagct accttcatat aaggtaagca aaaatccact tgctctgctc tttcaggtgt
     5401 ttgagtaaaa ttagctaaaa taatatcaac tttatttgat tttaaaaatt ccaccctatt
     5461 tgcagcttca actaatacaa actgcacctt attttcatct cctaagagtt cttttgctat
     5521 acgtttcgcc aagactatat cataaccttg atttacgcct ttttcatcta cataaccaaa
     5581 aggcggttta tctccaaaaa ctcctattct tactactcca tcttgcttga ttctttcaag
     5641 agaatttgaa gcaccagaat ctgaatttcc tccacaagca gccaaaaata ctgcaacaaa
     5701 ggttgtaaaa atacttaaga gcattttttt catacttttc ctttcttggt ataaacccta
     5761 atttattttg caaaaaatgc aaaagcatta tactttaaaa aaaagcatat ttcaattttt
     5821 taagataaaa ttatttcttc ttgtgtaaaa aagtaatatc aatatcaaag cataaaaatt
     5881 taagtataag attgttataa tttataaaac tatattaagg agaagatttt atgaaaaaaa
     5941 gtattgctct aaccctaggt actatatttt tcttttcagc gtgcagcaac tcgcttgata
     6001 aaacaacagt tgcaaaatat gaggagcgtc ttaacactca aataaatgaa acccttaagg
     6061 attttcaaca agatatgggt gtaagaatag aaatttctaa tttttcttgt aaaggcgatg
     6121 gaatgtttct tagatgttca agccctaatt ttaatgtttt tgcaaaagac aatacccaaa
     6181 cagagcaaaa actcatcgaa gcaaaaaatt tagaaattta ttctaatgaa atttacacag
     6241 gagaggagca aggcttaatc tctttaaaag attattacga taatctattg agtaaaaata
     6301 aaaatttaaa aacaagtttt accctagaag gatttaaact tggagaaaaa gtaatcagcg
     6361 atatcaatgc aagcttatct caaagcgatc caaagattca agattatctc gctaaactta
     6421 gttcaggtgt ctttacactt tcatttgaaa attcactttt tgtaaaaaat agcgattata
     6481 ataacaattt caacatgaaa ataaacaatc aagacttaaa tttcgatatg aatttaaatt
     6541 ttgactacaa acaaagcttg cttgatttct tcgaaaaagc aggaattaaa tacaatacac
     6601 aaacctatgc aatagatgaa aaagccgtag aagaacttct agatcagcaa ggatttgctc
     6661 aacctataca agaaagcgtt atcttaaata attttaaaat taactcttct ttagataccc
     6721 agggtgtttt tgaaaattat ataacaatcg ctaaaggtgg cctagaagct cttaaaattc
     6781 aaagtcaaaa tgaagaacaa accttgctta tagataaagc tttgttggct ctaaatgaaa
     6841 tcacaaaaga tgaagtctat aaacttgatt tagaagctaa atttaaacct attgcattaa
     6901 gtgattatcc taaagaaggt attaacgcag tagaaaagct aactgttaac aatcaagact
     6961 ttacagaaac acttagaata ctttttggct ttatgatgat acctataatg cttggaggtg
     7021 caacaggctt ttaagtaata tggagagaaa tctccatata ctcttttacc ttttttaagc
     7081 ctagttttat atatttttcg atacttttta gtctttaatt ttaaagattt aaaaaggaca
     7141 aaattgaaaa ttttattctc tcctagcgaa agcaaaaacg atacttgcaa agaaaaacct
     7201 atagataaaa gctcttttat atttgaaaat ttatttgatt ttagaatgca agctgtaaaa
     7261 aaatatgaag aatatatcaa taacgctgat ttgaaagcct tgcaagaact ttttggtata
     7321 aaaaatgaaa atgaaatttc taattttcaa agagatttaa aaaattctcc tacccaacaa
     7381 gctataacgc tttatagcgg ggtgagttat gagtatttaa attttgatat tttagataaa
     7441 gaaagtcaaa aatacatcct tgaaaacact cttatttttt caaatctttt cggggtagtt
     7501 aaagcaagcg atcatttgcc tttttataaa ttcaaacaag gcgcgaaaat aaataatttt
     7561 gctttagaaa aattttacaa agaacatttt agtaaagctt tagatgaata tttaaaaaat
     7621 gaagaactgc ttgatttaag agcgggtttt tatgataaat tttacacccc aaagcgtaaa
     7681 tttagtactt ataaatttat aaaaaagggt aaggtagtta gccattttgc taaagcttat
     7741 agggggattt tacttgctct ttgcgcaagg attaaagcta aaaacaatgc tgagatttta
     7801 aatcatcttc catctaattt aagtcttaaa gaaattcaaa acaagggttt aaaagaagaa
     7861 attgtgcttg aaattttaga ttaatttcca aacacaattt
//
LOCUS       DBBXOW010000074         7844 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.075, whole genome shotgun sequence.
ACCESSION   DBBXOW010000074 DBBXOW010000000
VERSION     DBBXOW010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7844
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.075"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            218..1189
                     /locus_tag="ACJE1S_001611"
     CDS             218..1189
                     /locus_tag="ACJE1S_001611"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HGG0807140.1"
                     /translation="MKKYISSCLAICCLSSAIYANDVKYDAQKIADIFYQLNADPKNP
                     KVKVNHAKGFCAMGTFEPAQSINKEIDVPLLTYKSLPIQVRYSLGGAFKDDKSKTRGM
                     AIRITDPQDSASWTMVMLNTEINFAKNPKEFGQFFEMRLPVNGKVDQEKISKMMQEID
                     SYRNFAAYTDKIGISKSVANTPFFSIHTFYFKQADGENYLPARWKLVPSEGVAYLNEA
                     QMKSASSDFLKEDFKDRVKTNKPVEYKMYLVYANKNDIINETTALWSGKHKESLVGTF
                     KVNALSDEDCNFDVYFPSDVPQGVNPPQDPLFDVRNEAYAITFGMRQ"
     gene            1455..1964
                     /locus_tag="ACJE1S_001612"
     CDS             1455..1964
                     /locus_tag="ACJE1S_001612"
                     /EC_number="1.-.-.-"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG0807141.1"
                     /translation="MKTLIIFAHTFWEDSKVNKALFESIKNSKQVQIHNLSEIYKEGK
                     IDVSKEMALLKNADKIIFQFPLFWFSTPALLKEWQDRVLTAILYGENKELLKDKKFQI
                     VTTLGGAQESYDGHHGATLEELLKPICYTFEYLGCKSLKPFAIFSADANKLDLKAYQD
                     AISQNSGCS"
     gene            2203..3318
                     /gene="solA"
                     /locus_tag="ACJE1S_001613"
     CDS             2203..3318
                     /gene="solA"
                     /locus_tag="ACJE1S_001613"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050131 - N-methyl-L-amino-acid oxidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HGG0807142.1"
                     /translation="MTYDIAVIGSGSVGSFAGYYAAKMGLKTCLIDKFQAPHTQGSYH
                     GDTRIFRIAYGEGEKYIPLLQEAYTLWGEFEKEQNIKLFERCGLLNIGSNSTFMQNVL
                     SSVKNYDLKAKILNAKELQENYNICVSDDFFGVLETDTGFVYSDLSVKSAINAACKLG
                     AHTLCDEIVRICKENGVYKIQTQNSSIQAKQILISAGSYVNEVLGVCEFDLPKVPVGI
                     RRKVVNWFDTDSYKLSQGFPAFILEFEDDYFYGFPDFADGLKVGRDKVGEIISTREER
                     VEFGSYEQDTLDIGKHIKEFFPDLKDFSKGSVCTYPLSPDDDFIIDFLDENLFFMGGL
                     SHGFKFAPALGLLGVKALQTQKLDPSIKQYFSLKRFG"
     gene            complement(3345..3947)
                     /locus_tag="ACJE1S_001614"
     CDS             complement(3345..3947)
                     /locus_tag="ACJE1S_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RBBP9/YdeN family alpha/beta hydrolase"
                     /protein_id="HGG0807143.1"
                     /translation="MKKIIFLLCLCISFVFAKQIYIVHGYGSDENYGFLPSVAKNLKA
                     KNHEVLLLSFPNAFSPKLDEWMQTMSQNFTKLDENTFFITHSLGGVAVLDFLNSLDER
                     TKIGGVIMVAPFDEPLAKLPILNDFIKPKLDYKKLDNMIIHKIIISAKDDKVVPIWVS
                     ENLAKKLNAKFIQTPNGGHFMESEGFKDLPLVIEELERIK"
     gene            complement(3974..5461)
                     /locus_tag="ACJE1S_001615"
     CDS             complement(3974..5461)
                     /locus_tag="ACJE1S_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG0807144.1"
                     /translation="MQNKIDKITDILRRDDGISGAMHYSEQISWILFLKFLDDYEEEL
                     KLEAILNDKAYKSILEEKFSWRIWAAPKTSEGKLDVKNALSGDDLLNFVNNELFPYLK
                     SFKDNENFKSIEYKIGGIFEFIDNRIANGHTLREVINLVDELSFSKESDVFALGEVYE
                     KLLKDMGSDGGNSGEFYTPRPLIRAMVEVIDPKAKERIYDPACGSCGFLVESFLHILY
                     EDRNKNKKANLSVEELEFLQNDALFGKEKTPLSYAMGVMNMILHEVKSPNIIKTNTLN
                     KKITDITQSEKYEVILANPPFGGKEKEQIQNNFPVKSNATELLFLQHILKSLNNNGRC
                     AIIVPEGVLFQNSNAFVSVKKDLLENFNLECVLSLPSGVFLPYSAVKTNVLFFSKGKR
                     SICGEDDKVYYYELIPPFKLTKNKPLEYAHFEEFLKIYKERKITPHSYLVSIKELEER
                     NYDISAKNPNSKEEKTLREVEEILSTLKANQEKANELLQKIQNII"
     gene            complement(5462..6532)
                     /locus_tag="ACJE1S_001616"
     CDS             complement(5462..6532)
                     /locus_tag="ACJE1S_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG0807145.1"
                     /translation="MKEFIPPKLPLNIELNSNIYSLIIKASRKLAELNRLSKSIPNPN
                     ILINALILQEAKDSSEIENIITTHDELFLSQIDESKLTRAAKEVKDYENALKKGYELL
                     KKERLLRNAHILEIQKRLERNNAGFRKQSGTMLKNPITGEIKHIPPQNHSDIQELMRN
                     LEQYINDDTLDELDFLVKMAIIHYQFESIHPFYDGNGRTGRIINILYLIYKGLLDLPI
                     LYLSAYIVKNKGEYYSLLQKVRDEGAILEWIEYILKGVEQTAIKTIETIATIEKMMLN
                     VSEILQNKTNFYSKDFVELLFSHPYTKIDFLIEKLNISRQSASKYLKICKNLGVLECI
                     KIGRNHYYINIELLRLFKKGIF"
     gene            complement(6653..>7844)
                     /locus_tag="ACJE1S_001617"
     CDS             complement(6653..>7844)
                     /locus_tag="ACJE1S_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG0807146.1"
                     /translation="EIFNIERGGSPRPIKEFLTDKEDGINWIKIGDIKNQKYLYKTEE
                     KIIQEGLKKSKLVIEGDLLVSNSMSFGKPVIVKLQKGAIHDGWLLLKEKINLNKEYFY
                     YLFSSNFMYNFLSYQASGSTVKNLNIDKLKQIEIPLPPLKEQERIVGILDESFAKIDE
                     SIKILEQDLLNLDELMQSALQKAFNPLKDNAKENYKLPQGWEWKSLGEIANTSSGGTP
                     SRNKKEYWENGNIKWLKSGELNDGYIDFIEENITEEAIKNSSAKIFQKGTLLIAMYGA
                     TAGKLGILNLDSTTNQAICAFLHKDKNIKFLEKFLFYFLFFLRDKIIKDSFGGAQPNI
                     NQTYIKNLQIPLPPIKEQEQIASHLDELSSHVKNLKQNYQAQIKDLQELKKSLLDKAF
                     KGNL"
BASE COUNT         2517 a         1169 c         1235 g         2923 t
ORIGIN      
        1 aagtttttac ttgaaataat aaagttaaga tataaaagtt aattttaaaa tttctatagt
       61 tactatttag atgttgtata ttttaaaaat gcaaacttaa aatattagca taataaggat
      121 atttgaattt ataacaattt tcattaataa tgcaaattat cgtttatagt taaatattac
      181 aatgcctact taaaaatttt gaaactagga gtttgtaatg aaaaaatata ttagtagctg
      241 tttggctatt tgttgtttaa gtagtgctat ttatgccaat gatgtaaaat atgatgcaca
      301 aaaaatagcg gatatttttt atcaactcaa tgcggatcct aaaaatccca aagtaaaagt
      361 taatcatgca aaaggttttt gtgctatggg aacttttgag ccagcacaat ctattaataa
      421 agaaattgat gtgcctttat tgacatacaa aagtttacca attcaagtaa ggtattcttt
      481 aggtggagct tttaaagatg ataaaagcaa aacaagaggc atggctatta gaattactga
      541 tcctcaagat tctgcttctt ggactatggt tatgttaaat acagaaataa attttgcaaa
      601 aaatcctaaa gaatttggtc agttttttga aatgagactt cctgtaaatg gtaaagttga
      661 tcaagaaaaa ataagtaaaa tgatgcaaga gattgattcc tatagaaatt ttgctgcata
      721 tactgataaa attggtatta gcaaaagtgt agcaaatact ccatttttta gtattcatac
      781 tttttatttt aaacaagcag atggagaaaa ttatttgcca gcgagatgga aattagttcc
      841 aagtgaaggt gtggcgtatt taaatgaggc gcaaatgaaa agcgcaagta gtgatttttt
      901 aaaagaagat ttcaaagatc gcgtaaagac taataagcca gtagaatata aaatgtattt
      961 agtatatgca aataaaaatg atattattaa tgaaacgaca gctttatgga gtggtaagca
     1021 taaagaaagc ttagttggaa cttttaaagt taatgctttg agtgatgaag attgtaattt
     1081 tgatgtatat ttcccttcag atgtacctca aggagtaaat ccgccacaag atcctttgtt
     1141 cgatgtaaga aacgaggctt atgctatcac ttttggtatg cgtcaataaa tctttacttt
     1201 caagggttaa agtcttttaa gaacttatac tgttttgcca aagcttgtct taagattaag
     1261 ctttggggat tcattttttt atgtttatga aaaatatagg ttttatgaga tataaaatac
     1321 aagtgataat ttagcatttt tgaaatataa aaatgtgatt ttagagtaaa aatataaaaa
     1381 taattaaccc tagtattcta tataatattt acacttatac tttataattt agtaaatact
     1441 aaaaaaggaa aaaaatgaaa actttaatca ttttcgcaca tacattttgg gaagattcta
     1501 aggtaaataa ggctttgttt gaaagcatta aaaattcaaa acaagtacaa attcacaatc
     1561 ttagcgaaat ttacaaagag ggtaaaatcg atgtcagtaa agaaatggct ttgttaaaaa
     1621 atgccgataa aatcatcttt caatttccac ttttttggtt tagcactcca gcgcttttaa
     1681 aagagtggca agatagggtt ttaacagcaa ttctttatgg agaaaataaa gaacttttaa
     1741 aagataaaaa atttcagatt gtaacgactt taggcggcgc gcaagagagt tatgatgggc
     1801 atcatggtgc gactttagaa gagcttttaa agccgatttg ttatacattt gaatatctag
     1861 gatgtaagag tttaaagcct tttgcaatct ttagtgcaga tgcaaataag cttgatttaa
     1921 aagcttatca agacgctata agtcaaaatt cagggtgttc ttaaatactt tttataaatt
     1981 taagaaaatg cttacaactt acaaaaaatt tctaaaactc tagcaatata aaaagcttga
     2041 atttaaggtg attgatcgcc ttaaattttt taattaaatt ttaatcctca aaatttctaa
     2101 gcaagggata aatttttatt ttttataaac actgaactaa tatttatagt ataatttttt
     2161 ccaaatttta tgtatcaaat tggcgatata aaggaagata aaatgactta tgacatagcg
     2221 gttattggaa gtggtagtgt ggggagtttt gctgggtatt atgcggctaa aatgggctta
     2281 aaaacctgtc ttatcgataa atttcaagca cctcatactc aaggttctta tcatggtgat
     2341 acaaggattt ttcgtatagc ttatggcgag ggtgaaaagt atataccgct tttacaagag
     2401 gcatacacgc tttggggaga atttgaaaaa gagcaaaata tcaagctttt tgagcgttgt
     2461 gggcttttaa atatcggctc aaattctact tttatgcaaa atgtgctctc aagtgtgaaa
     2521 aattacgatc ttaaagcaaa aattctaaat gccaaagaat tgcaagaaaa ttataatatt
     2581 tgcgtatcag atgatttttt cggcgtgtta gaaacagata caggctttgt gtatagtgat
     2641 ttgagtgtaa aaagtgctat caatgctgct tgcaagcttg gtgcgcatac tttgtgtgat
     2701 gaaatcgtgc gcatatgcaa agaaaatgga gtgtataaaa tacaaacaca aaattccagc
     2761 atacaagcaa aacaaattct aatcagtgca ggaagttatg tcaatgaagt attgggcgtg
     2821 tgtgaatttg acttgccaaa agtgcctgtg ggcattagac gcaaagtggt gaattggttt
     2881 gatacggatt cttataaact ctcacaaggt tttccagcgt ttatactcga atttgaagac
     2941 gattattttt atggttttcc tgattttgca gatggattaa aagtgggtag agataaagta
     3001 ggggagatca ttagcacccg cgaagaacgc gtggaatttg gatcttatga gcaagatact
     3061 cttgatatag gtaagcatat caaagaattt tttcctgatt taaaagattt tagcaaaggc
     3121 agtgtttgca cctatccttt aagtcctgat gatgatttta tcatcgattt tttagatgaa
     3181 aatctctttt ttatgggtgg gcttagtcat gggtttaaat ttgctcccgc acttggactt
     3241 ttaggcgtga aagcattgca gactcaaaag ctagatccga gtataaagca gtattttagc
     3301 ctaaagcgtt ttggataaag ctgtataacc cttatattta agggttattt aatacgctct
     3361 aattcttcta taaccaaagg caaatcttta aagccttcgc tttccataaa atgtccacca
     3421 tttggagttt gtatgaattt agcatttagc tttttggcta aattttcact cacccaaatt
     3481 ggcacgactt tatcgtcttt tgcgctgatg atgattttgt gaattatcat gttatcaagc
     3541 tttttatagt ctaattttgg ctttataaaa tcatttaaaa taggcaattt tgccaaaggt
     3601 tcatcaaagg gtgcaaccat tattacaccg ccgattttag tcctttcatc aagcgaattt
     3661 aaaaaatcaa gcaccgcaac tccacctaaa gaatgcgtga taaaaaaggt attttcatca
     3721 agttttgtga aattttgact catggtttgc atccactcat caagcttagg cgaaaaagca
     3781 ttagggaaac ttaaaagtaa aacttcatga tttttagctt ttaaattctt tgctacactt
     3841 ggtaaaaatc cgtaattctc atcgctgcca tagccatgca cgatataaat ttgcttagca
     3901 aaaacaaagc taatgcaaag acaaagcaaa aagatgattt ttttcataag tgtcctttct
     3961 aaaattcagt agtttagata atattttgta ttttttgcaa aagctcattg gctttttctt
     4021 gatttgcctt taaagtgctt aggatttctt ctacttcacg caaggttttt tcttctttgg
     4081 aatttggatt tttagcactt atatcatagt ttctttcttc aagttctttt atgctaacta
     4141 gataagaatg aggagtgatt tttctttcct tatagatttt taaaaattcc tcaaaatgtg
     4201 cgtattctaa aggcttgttt ttggtgagtt taaaaggtgg tataagctca taataataca
     4261 ccttatcatc ttcaccacaa atacttcttt ttccttttga gaaaaaaagc acattggttt
     4321 ttaccgcact ataaggtaaa aataccccgc ttggcaagct taaaacgcat tcgagattga
     4381 aattttctag caagtctttt ttcacgctta caaaggcatt tgaattttga aaaagcacgc
     4441 cctcaggcac tattatagca catcttccgt tgttgtttaa agattttaag atatgttgta
     4501 aaaataaaag ctcagtagcg tttgatttta cgggaaagtt gttttgaatt tgttcttttt
     4561 ccttgcctcc aaagggtgga tttgccaaaa tcacttcata tttttcgctt tgggttatgt
     4621 ctgtgatttt tttatttaga gtgtttgttt tgatgatatt tggagatttt acctcgtgca
     4681 agatcatatt catcacgccc attgcgtagc ttagtggggt tttttctttg ccaaataatg
     4741 catcattttg taaaaattca agctcttcta cgcttaaatt tgcttttttg tttttattcc
     4801 tgtcttcata caagatatgc aaaaagcttt ctactaaaaa cccacaactc ccacaagcag
     4861 gatcataaat cctttctttt gctttaggat ctatcacttc taccatagct cttatcaaag
     4921 ggcgtggcgt gtaaaattct ccactatttc ccccatcgct tcccatatct tttaaaagct
     4981 tttcataaac ttcacctaag gcaaatacat cactttcttt actaaagctt agctcatcga
     5041 ctaaatttat aacctctctt aaggtgtgtc cattggctat gcgattgtct ataaactcga
     5101 aaattccgcc tattttatac tctatgcttt tgaaattttc attatcttta aagcttttta
     5161 gatatggaaa aagctcgtta tttacaaagt taagcaaatc atctccgctt aaagcatttt
     5221 ttacatcaag tttgccttca cttgtttttg gagctgccca tattctccag ctgaattttt
     5281 cttctaaaat gcttttatat gctttatcat ttaagatagc ttctagtttt aattcttctt
     5341 cataatcatc taaaaatttt aaaaacaata tccagctgat ttgctcacta tagtgcatcg
     5401 caccgcttat accatcatcg cgtcttagta tgtctgtgat tttgtcgatt ttattttgca
     5461 tttaaaaaat tcccttttta aaaagtctta aaagttctat atttatataa taatgatttc
     5521 tacctatttt aatgcattct aataccccta aatttttaca aattttaaga tattttgagg
     5581 cactttgcct agaaatattt aatttttcta tcaaaaaatc tatctttgta taaggatgag
     5641 aaaacaaaag ctctacaaag tctttactat aaaaattggt tttattttgc aaaatttcgc
     5701 ttacatttag catcattttt tctatcgtgg caatagtttc aatagttttt atagcagttt
     5761 gctctacgcc ttttagtatg tattctatcc attctaaaat cgctccttca tctcgcactt
     5821 tttgcaaaag actataatac tcccctttat tttttacaat ataagcactc aaatataaga
     5881 taggcaaatc aagcaagcct ttataaatca aataaagtat atttataatc ctgcctgttc
     5941 tgccattgcc atcataaaat ggatgaatgc tttcaaattg ataatgaatg attgccattt
     6001 ttactaaaaa atctagttca tctaaagtat catcgttaat gtattgctct aaatttctca
     6061 taagctcttg tatgtcgcta tgattttgtg ggggtatgtg tttgatttct cctgtgatag
     6121 ggtttttaag cattgtgcca ctttgttttc taaagcctgc attgtttctt tctaatcttt
     6181 tttgaatttc taaaatatgt gcatttctca acaaacgctc tttttttaaa agctcatacc
     6241 cttttttcaa agcattttca tagtctttta cttcttttgc tgctcttgta agtttgcttt
     6301 catcgatttg agataaaaaa agttcatcat gggttgtgat tatgttttct atctcgcttg
     6361 aatcttttgc ttcttgcaaa attaaagcat tgattaaaat gtttggatta gggatacttt
     6421 tgctaagtcg gttgagttct gctaattttc ttgaagcttt gatgataagg ctgtaaatat
     6481 ttgaatttaa ttctatattt agaggtagtt ttgggggtat gaattctttc atgatttttc
     6541 catatgttaa aatttctaaa aatttttaac attataaaag aatatgttaa aaaaaacaaa
     6601 aatttttaac atatctagct aatgtgttaa aatttctaaa aatttttaac atttataaat
     6661 ttcctttaaa agccttatct agcaatgatt ttttaagctc ttgcaagtct tttatctgtg
     6721 cttgatagtt ttgctttaaa ttttttacat gagaagaaag ctcatctaaa tgcgaagcga
     6781 tttgctcttg ctctttgatt gggggtaatg ggatttgtaa attttttata taggtttgat
     6841 ttatattagg ttgagctcca ccgaaagaat ctttgatgat tttatctctt agaaaaaata
     6901 gaaaataaaa aagaaatttt tccaagaatt taatattttt atccttatgt aaaaatgcac
     6961 aaattgcttg atttgtagtg gaatctaaat ttagaattcc tagttttcca gctgttgctc
     7021 catacatagc aataagtaga gtcccttttt gaaatatctt agctgacgag tttttaatag
     7081 cttcttctgt aatattttct tctataaaat caatatatcc atcatttaat tccccactct
     7141 ttagccattt gatatttcca ttttcccaat attctttttt atttcttgat ggggttccgc
     7201 cactgctagt atttgcaatt tcccctaagc ttttccattc ccaaccttgt gggagtttgt
     7261 agttttcttt ggcattgtct tttaagggat tgaaagcttt ttgcaaggca ctttgcatta
     7321 actcatctaa atttagcaaa tcctgctcta agatttttat actctcatct atctttgcaa
     7381 aactctcatc taaaattccc actatccttt cttgctcttt gagtgggggt agtgggattt
     7441 caatttgttt gagtttatct atatttaaat tttttacagt agaaccagag gcttggtagg
     7501 ataaaaagtt atacataaaa ttactagaaa ataaatagta aaaatattcc ttatttagat
     7561 taattttttc ttttaacaat agccaaccat cgtgaattgc acctttttgt aattttacaa
     7621 taacaggttt gccaaaactc attgaatttg aaaccaataa atctccttca atgactaatt
     7681 tacttttttt aagtccttct tgtatgattt tttcttctgt tttatagaga tatttttgat
     7741 tttttatatc gccgatttta atccaattta taccatcttc tttatctgtt aaaaattctt
     7801 taataggtct aggagagccc cctctttcaa tattaaaaat ttct
//
LOCUS       DBBXOW010000075         7772 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.076, whole genome shotgun sequence.
ACCESSION   DBBXOW010000075 DBBXOW010000000
VERSION     DBBXOW010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7772
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.076"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            8..397
                     /locus_tag="ACJE1S_001618"
     CDS             8..397
                     /locus_tag="ACJE1S_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HGG0807147.1"
                     /translation="MLALSLYAKDIEIKDAFIKQTPPNAVNSAIFLTIVNNTDKDISL
                     IDAKTDINQVSELHTHEHKHGMKAMIQIPEIPVKAHSSTELKPGSYHIMLFKLNQAID
                     ENTKANLTLTFDNNQSLEVRDIGSKKL"
     gene            401..853
                     /locus_tag="ACJE1S_001619"
     CDS             401..853
                     /locus_tag="ACJE1S_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807148.1"
                     /translation="MKKIFFILASGLSLLILYIIFDFYVLKDRTTLSQTEVLSPLSCD
                     LNIENCTYSFKDREVLISMDPKPLQSLEITNLKIKNLGNYKNLKIKIYGLNMFMGDIM
                     PRVTKINETDYESRLVLAACVLEVMRFRAEVFEDDKPIGFHFDFDLKR"
     gene            850..1404
                     /locus_tag="ACJE1S_001620"
     CDS             850..1404
                     /locus_tag="ACJE1S_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HGG0807149.1"
                     /translation="MKKVFLFAVAFVAMGILAFCLINKNQYDFNLRSAFKEQTTLEDF
                     KGKKLIVYFGYTFCPDICPSTLSLIGKNLKALKDPKAHVLFISLDISRDGNLTSTNEW
                     LRYFYPNADALIAKNDSVLKKVAKNYGVQYQKIDINDSVMKYSVAHSSEIFLIDENGK
                     LQKIIRDLNPEEVAKELKNFLSSK"
     gene            complement(1410..2309)
                     /gene="cysK"
                     /locus_tag="ACJE1S_001621"
     CDS             complement(1410..2309)
                     /gene="cysK"
                     /locus_tag="ACJE1S_001621"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HGG0807150.1"
                     /translation="MRVYKKVNELIGNTPIIQLEKFGANLFAKCEFLNPSHSIKDRAA
                     FAMIQSALNEGKIDSKTVIVEATSGNTGIALAMICADLGLQFVATMPESMSIERRKMI
                     TLFGAQLELTPASLGMKGAVDKANEILKNTPNSFMPSQFDNLANKNAHRKTTALEILK
                     DLDNDLDIFVAGFGTGGTISGVGEILKEKLGKIHVVAVEPLASPLLSKGEAGSHKIQG
                     IGANFIPAILNKDVIDEIITVSNEDAINTAKELAKNGLMVGISSGANVFAASVLAKKF
                     PDKKILTMLNDTAERYLSTDLFA"
     gene            complement(2437..2727)
                     /locus_tag="ACJE1S_001622"
     CDS             complement(2437..2727)
                     /locus_tag="ACJE1S_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HGG0807151.1"
                     /translation="MTKADFISQVAQTAGLTKKDATAATDAVISTITDVLAKGDSVSF
                     IGFGTFSTAERAAREARVPSTGKTIKVPATRVAKFKVGKNLKDAVAKAKKKK"
     gene            complement(2804..4645)
                     /gene="ciaB"
                     /locus_tag="ACJE1S_001623"
     CDS             complement(2804..4645)
                     /gene="ciaB"
                     /locus_tag="ACJE1S_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HGG0807152.1"
                     /translation="MNNFKELANLVKNRKENINLFYDLLDSEQWGEYFERLLTLSELK
                     RDKTTLLAILRRLVDLKEENLIQEWKKNNFKEEKITKLKHKFYEEIRKFYEKEHQELI
                     YEIKERKIVNDFYQVLIQGVHNIGLVINAFEVSWTKEIIEKNNKILATQFPNLNDAME
                     FLRKNQLYQTTPKGDICERSYGVLVRIGNMWKFVPYARFFEDEILKLEFAFDDMIDKL
                     KQIAKNEDELAYIEYFQKLKLAFCEKEEEKVIGAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDESDFDALKFSKDIKQSFMRVYENIGIQDEQLKNEVLHNID
                     KTQLYVCAPMIYYGAELKGLFSAQVVPNDEFVSSIAGKKIFAFLNFVYENAKTKPFMR
                     IASEIFNKDFLDYGRDILFFKEKIWKRVYEVSTIGHEFGHIFFIAKDSEKLMNQSGFF
                     KNIEEYKATSGGLVNFFYHEQEDLKLPVFHELIKRAVSLIAWQRVEEVKPYYTEGLIH
                     LSLLFQSGVLKFENNRLNVNFNLEYYENFKDATLKNYHDLAKHYALKLDAKEFLNRFC
                     ALKNDIFMPLHPECKEFVQFYYDLYEKIGNEIDNSGEFERYKMQKKS"
     gene            4710..5123
                     /locus_tag="ACJE1S_001624"
     CDS             4710..5123
                     /locus_tag="ACJE1S_001624"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG0807153.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKIVSVGKTSIGVEVEVSAQRVDSQGCTSC
                     INVTSALVTYVSVTREGKKKPISEELKKIHGFTNT"
     gene            complement(5169..5366)
                     /gene="kcuS"
                     /locus_tag="ACJE1S_001625"
     CDS             complement(5169..5366)
                     /gene="kcuS"
                     /locus_tag="ACJE1S_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HGG0807154.1"
                     /translation="MNFKKFKHYYEKAERFFHPLVGLSSYDKYLEHMKHKHPEKTPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(5347..7458)
                     /locus_tag="ACJE1S_001626"
     CDS             complement(5347..7458)
                     /locus_tag="ACJE1S_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HGG0807155.1"
                     /translation="MARFGTKILWLFAAALGAICFAHLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPAVLENDGRDFVPTNRTVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRRGRSLGEIIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGVYMRFIRPGRV
                     GEASVIGFILLILAIHYGSVIAADPYWAKIFTLEAPTLAIIMMAYGFIAAVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIIIVAPDLQMPKTNAQYFDGTGPVFAGAIFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALPVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGSDVASAAQAISSWGFSITPEEISTLTANIGEYTILSRTGGAPTFAIGV
                     ALILHELFGGIDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGNI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATAIL
                     VKMGKAKYTWVTLIPATFVLVATLYGGIQKVMPYEEGNKVGNAVSHVAAVTIQSQKIQ
                     DLELKLNNAKDENEIAAIEKEISVATQSKIGNLINAILCVFFMLATLLVILSCIGICL
                     GKIKIPLKETKYIKLDEFQKV"
BASE COUNT         2675 a         1346 c         1090 g         2661 t
ORIGIN      
        1 aagcgctttg cttgcattaa gtctttatgc taaagatata gaaatcaaag atgcatttat
       61 taaacaaact ccacctaatg ctgttaatag tgctatattt cttaccattg ttaacaatac
      121 cgataaggac atctctttaa tagatgcaaa aactgatatc aatcaagtga gcgaattaca
      181 cactcatgaa cataaacatg gtatgaaagc tatgatacaa attcctgaga tacctgttaa
      241 agcacattct agtaccgagt taaaacctgg aagttatcat attatgcttt ttaagcttaa
      301 tcaagctatt gatgaaaata ctaaagcgaa tttgacttta acttttgaca ataatcaaag
      361 tttagaagtt cgtgacatag gatcaaaaaa gttatagata atgaaaaaaa tattttttat
      421 tttggcctca ggcctatctc ttttaattct ttatatcata tttgattttt atgttttaaa
      481 agatagaacg actttaagtc aaactgaggt tttatcacct ctaagctgtg atttaaatat
      541 cgaaaattgc acttatagtt ttaaggatag agaggttttg atttctatgg atccaaaacc
      601 tctccaatcc ttagaaatca ccaatttaaa aattaaaaat ttaggaaatt ataaaaattt
      661 aaaaattaaa atttatggct taaatatgtt tatgggagat ataatgccta gagttactaa
      721 aataaatgaa acagattatg agtcaagatt ggttttagct gcatgtgttc ttgaagttat
      781 gcgttttaga gctgaagttt ttgaagatga taaacctata ggttttcatt ttgattttga
      841 tctaaaaaga tgaaaaaggt ttttttattt gcagtcgcct ttgttgcgat gggtatacta
      901 gctttttgtt tgataaataa aaaccaatac gactttaatc taagatctgc ctttaaagag
      961 caaactactt tagaggattt taagggcaag aaacttatag tttattttgg ttatactttt
     1021 tgtcctgata tttgcccctc tactctctct ttaatcggta aaaatttaaa agcccttaaa
     1081 gatccaaaag ctcatgttct ttttatttct ttagatattt ctagagatgg taatttaact
     1141 tcaactaacg aatggttaag atatttttat cccaatgcgg acgctcttat tgcaaaaaat
     1201 gatagcgttt taaagaaagt ggctaaaaat tatggagttc aatatcaaaa aatagatatc
     1261 aatgattctg tgatgaaata ttccgttgcg catagtagcg aaatttttct catcgatgaa
     1321 aacggaaagc tacaaaagat cattagagat ttgaatcctg aagaagttgc aaaagagctt
     1381 aaaaattttc taagctctaa ataaaatttt taagcaaaaa gatcggttga aagatatctt
     1441 tcagctgtat catttagcat agtaagaatt tttttatctg gaaatttttt agccaaaaca
     1501 cttgctgcaa acacatttgc accacttgaa attcctacca taagaccgtt tttagcaagc
     1561 tctttagctg tatttatagc atcttcattg ctaactgtga tgatttcatc tataacatct
     1621 ttatttaaga tagcagggat aaaatttgca cctatacctt gtatcttatg acttccagct
     1681 tcacccttac taagtagcgg agaggctaaa ggttctacag caacgacatg aatttttcct
     1741 aatttttctt ttaaaatttc accaactcca ctgatagttc cacctgttcc aaaacccgct
     1801 acaaaaatat caagatcatt atccaaatct tttaatattt ctaaggcagt agttttgcgg
     1861 tgtgcatttt tattggccaa attgtcaaac tgcgatggca taaaagaatt tggggtattt
     1921 tttaaaattt cattagcttt atccactgca cctttcatac ctaaacttgc aggagttagt
     1981 tcaagttgtg ctccaaaaag agttatcatt ttgcgtcttt ctatactcat agattctggc
     2041 atagtggcaa caaattgaag tcctaaatct gcacaaatca ttgctaatgc aatacctgta
     2101 tttccgcttg tagcttcgac tataacagtc ttagaatcga ttttgccctc atttaaagcg
     2161 ctttggatca ttgcaaaagc tgctctgtct ttaattgaat gacttggatt taaaaattcg
     2221 catttagcaa aaagatttgc accaaatttc tctaattgta ttataggagt attgcctata
     2281 agttcattta cttttttata aactctcata aaaccaacct ttcaaaaatt tagcttcaag
     2341 taagtttata aaaataaagt aaataaagga tataaattgt cggattaatt taaatttttt
     2401 atttaagcag ggctagaaaa atttctagcc ttaatattat tttttctttt tagcttttgc
     2461 aacagcgtct ttaaggtttt tacccacttt aaatttagca actcttgttg caggaacctt
     2521 aatggtttta ccagtacttg gcactcttgc ttctcttgcg gctctttcgg ctgttgagaa
     2581 agtaccaaaa cctataaagc taacgctatc acctttagcc aatacatcag tgatagtaga
     2641 aataactgca tcagtagcag cagtagcatc tttttttgtt agcccagcag tttgagcaac
     2701 ttgcgaaatg aaatctgctt tagtcataaa agctcctttg ttttatattg aaacgcctaa
     2761 ttctagcata tttagaaaac aatatcaagt aaaaacatgt tttttaggat tttttttgca
     2821 ttttatagcg ctcaaattcc ccactattgt caatttcatt gcctattttt tcatatagat
     2881 catagtagaa ttgaacaaat tctttgcatt ctggatgaag aggcataaaa atatcgtttt
     2941 ttaaagcaca aaaacgattt aaaaattctt tagcatcaag ctttaaagca taatgtttag
     3001 ctaaatcatg ataatttttt aaagttgcat ctttaaaatt ttcataatat tccagattaa
     3061 aattaacatt taatctattg ttttcaaatt tcaaaactcc actttgaaat aatagtgata
     3121 aatgaataag tccttctgta taataaggct taacctcttc aactctttgc caagctatca
     3181 aagatacagc tcttttaata agttcatgaa aaacaggtaa tttcaaatcc tcttgttcat
     3241 gataaaagaa attaacaagt ccgccacttg ttgccttata ttcttcgata tttttaaaaa
     3301 aaccactttg attcataagt ttttcactgt ctttagcgat aaaaaatata tgaccaaatt
     3361 catgtcctat agtagaaacc tcataaactc ttttccaaat tttttctttg aaaaataaaa
     3421 tatctcttcc ataatccaaa aaatctttat taaaaatttc actagcaatt ctcataaaag
     3481 gttttgtttt agcattttca tagacaaaat ttaaaaaagc aaagattttt ttgcctgcaa
     3541 tagaacttac aaattcatca ttaggaacaa cttgcgcaga aaacaaaccc ttaagctcag
     3601 ctccataata aatcatcggt gcgcaaacat aaagctgtgt tttatcaata ttatgcaaaa
     3661 cttcattttt aagttgctca tcttgaattc cgatattttc atatacgcgc ataaagcttt
     3721 gcttgatatc ttttgaaaat ttcaaggcat caaaatcact ctcatcttct attcttatat
     3781 cccactctaa agctacagca tgagtgtaat tatcttcata gtattctaaa ggatgaccta
     3841 cttgtaatgg agatttgact ttcatccatg caaattcagc ctcttgccac gctcctataa
     3901 ccttttcttc ttccttttca caaaaagcta gttttagctt ttgaaaatac tctatataag
     3961 ctaactcatc ttcattttta gctatttgtt ttaatttatc aatcatatca tcaaaagcaa
     4021 attcaagttt taaaatttca tcttcaaaaa atcttgcata aggaacaaat ttccacatat
     4081 ttcctattct taccaaaaca ccatagcttc tttcgcaaat atcacccttt ggagttgttt
     4141 gatagagttg attttttcgt aaaaattcca tcgcatcgtt taaatttgga aattgagttg
     4201 ctaaaatttt attgtttttt tctataatct ctttagtcca agaaacttca aaagcattga
     4261 taactaagcc tatattatgc actccttgga taagaacttg ataaaaatca tttacgattt
     4321 ttctttcttt gatctcatag attagctctt gatgctcttt ttcataaaat tttcttatct
     4381 cttcatagaa tttatgctta agcttggtaa ttttttcttc tttgaaatta ttttttttcc
     4441 actcctgtat caaattttcc tctttaagat ctactaagcg tcttaatata gccaaaagag
     4501 ttgttttatc tcttttcaac tcactaagag ttaaaagtct ctcaaaatac tcgccccatt
     4561 gctcagaatc taaaagatca taaaaaagat tgatattttc tttacgattt tttacaagat
     4621 ttgctaattc tttgaaatta ttcatacttt tattctcctt ttttaacttt attgaattat
     4681 aattcatttt ttaaaataag gagtaaaaaa tgagagatat gggagaacca aaattaaaaa
     4741 ttgttgcaat gccaagtgat accaatcccg caggtaatat ttttggtgga tggatacttt
     4801 cacaaattga tttagcaggc gcaatagcag ctagagaact ttctcctgaa cgcgtcgtaa
     4861 ctatatctat ggataaggta gtttttaaag agcctgtttt tataggtgat ataatttctt
     4921 gctattctaa gattgttagc gtaggaaaga cttctatagg tgtagaagta gaagttagtg
     4981 ctcaaagagt ggattcacaa ggctgtactt cttgcataaa cgtaacctct gccttagtta
     5041 cttatgttag cgttacaaga gaaggaaaga aaaagcctat tagtgaagaa ttaaagaaaa
     5101 ttcatggatt tacaaatact taaagcttaa ttttttgtat gataaaaact ttatccttgt
     5161 taagcttatc agcatttatt taaaccgccg ctgttatatt ttttatctaa acattccttg
     5221 aaaaattctc ctctagtttt tggggttttt tcaggatgtt tgtgtttcat gtgttctaaa
     5281 tacttatcat aactcgaaag tcccactaag ggatgaaaaa acctttcggc tttttcatag
     5341 tagtgtttaa actttttgaa attcatcaag tttaatatat ttggtttctt ttagtggaat
     5401 tttaatctta cctaggcaaa ttcctatgca agagagtatg acaagcaatg tggccaacat
     5461 gaaaaacaca caaagaatgg cattgattaa atttccgatc ttactttgag tagctacaga
     5521 aatttctttt tcaattgctg caatttcatt ttcatctttg gcattgttta atttcaattc
     5581 taaatcttga attttttgac tttgtatagt aactgctgcc acatggctta cagcatttcc
     5641 tactttattt ccttcttcat aaggcataac tttttgtatt cctccatata gggttgctac
     5701 caaaacaaat gtagcaggaa ttaaagttac ccaagtgtat tttgccttgc ccatttttac
     5761 aagtatggct gtagcaagaa gtaaagccat acctgcaagc atttgattgc ttacaccaaa
     5821 gagaggccaa agggtataaa taccgccttt aggatcaatc gcaccttgat aaagaaaata
     5881 tccccatcct gcaacactca atgcggttgc taaaagtcca gctggataat tatgaatatt
     5941 tcccaaaggt ttatagacat tacctaagat atcttgcacc ataaaacggc aagctctagt
     6001 tccagcatcc acagctgtta agataaataa agcttcaaac aatatagcaa aatgatacca
     6061 aaaagccatt agatcaatac caccaaaaag ctcatgtaaa attaaagcta cacctatagc
     6121 aaaagttgga gccccacctg ttctagaaag tatagtgtat tctcctatat ttgcagttaa
     6181 agtagaaatt tcttcaggag tgatactaaa tccccaactt gaaatagctt gcgccgcact
     6241 tgcaacatca gatcctatta aagcagaact tgaatttata gcaaaataaa gtccaggatg
     6301 taaaatacaa gcacaaatta aagccataat tgctacagca ctttctgcaa gcatagagcc
     6361 atatccaaca ggcaaagcat gagtttcatt ttcaagcatt tttggagtag ttccacttga
     6421 aataagagca tgaaaaccac taatagcacc acaagcaatg gttataaaca aaaatggaaa
     6481 aatagcaccc gcaaatacag gacctgttcc atcaaaatac tgagcattgg tttttggcat
     6541 ttgcaaatca ggtgcaacga taataatagc tacagccatt acaacaataa caccaatctt
     6601 taagaaagta gaaagataat ctcttggagc caataaaaac catacaggta aaacagctgc
     6661 gataaagcca taagccatca taataattgc caaagttgga gcttctaatg tgaatatttt
     6721 cgcccaataa ggatcagcag ctataacact accataatga atcgctagaa tcaaaagtat
     6781 aaaacctata actgaagcct cacctactct acctggacga ataaagcgca tatatactcc
     6841 cataaaaatt gctataggaa tagtcattgc aatggtaaat aatccccaag gtgactctgc
     6901 gagagctttt acaactacca tagctaaaat agcgatgata ataagcatga taccaaaaat
     6961 tgctaccatt gcaacaccac cggtaaattt acccatttca tctttgataa tttcgcctaa
     7021 acttctacct cttctacgag tggatataaa aagcacaaca aagtcatgaa ccgcacctgc
     7081 taaaacacct cccactaaaa tccaaagcat agaaggtaaa tatcccatct gagcagccaa
     7141 aataggaccc actaaaggac cagcacctgc aatagcagca aaatgatgtc caaacaaaac
     7201 tgttctattt gtaggaacaa aatcgcgtcc atcattttct aaaactgcag gtgtagcacg
     7261 atttttgtca agttctaaaa ccttatacgc tacaaagcgt ccataaaatc tatatcctat
     7321 catatagata cacacagcag caactactag ataaattgct gatacactct cgccattttg
     7381 taaagctaaa tgagcaaaac aaatagcacc taaagctgcg gcaaacaacc ataaaatttt
     7441 agttccaaaa cgagccatag ttctcctaaa ataataaaaa tatttcaaag gataccaaat
     7501 ttataaataa atttaataaa atgtttgttt agttttttta catcgtataa aaaaatattc
     7561 tttttgtttc tttaagtgac attttcaaaa aaaataaaca tgcaatcttg tattattttt
     7621 tatgactatt tttaagacaa gttttattaa agttaaaaat atttatagaa tgttgcttta
     7681 ttttgttaaa agtttgcttt tattttttaa gtcgttatta tatttaaaga tgcactatca
     7741 aatatttttt gtcattagta aaagtaaaaa aa
//
LOCUS       DBBXOW010000076         7571 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.077, whole genome shotgun sequence.
ACCESSION   DBBXOW010000076 DBBXOW010000000
VERSION     DBBXOW010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7571
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.077"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            117..1298
                     /locus_tag="ACJE1S_001627"
     CDS             117..1298
                     /locus_tag="ACJE1S_001627"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HGG0807156.1"
                     /translation="MKVYLDNNATTMLDPSAYELMLPFLKDMYGNPNSLHQWGSATHP
                     ALREAMDKLYAGLGANDLDDIVITSCATESINWVLKGIYFDHILDKERNEVIISSVEH
                     PAVAAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IQKMAEIAHEFGALFHTDATQAVGKIKVNLNQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAENDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            1308..2279
                     /locus_tag="ACJE1S_001628"
     CDS             1308..2279
                     /locus_tag="ACJE1S_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HGG0807157.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHTVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(2302..4185)
                     /locus_tag="ACJE1S_001629"
     CDS             complement(2302..4185)
                     /locus_tag="ACJE1S_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HGG0807158.1"
                     /translation="MKKIIILFLLGISCLWGDEFRLIDTNASAQDKSVYSLVQKYIDL
                     NRQIKEFKKNNDENSSSYDGILSEFEKDKKSILSKIPDMIVKQQINEKAVESFLKTRQ
                     NLLDLQKKSINKPYVYVDTTLNIMYLDVVKSFYSSLFELERLFKNAANSESIISTVDK
                     AMENLQNSTNIDLSIYKAKINNPSELEKISNKEEMIFNAVDAYVEILKYLRANADLLE
                     SNYIFSLLELQVWIDRINEMANIDFINTGKIVISILVLVFFMSLRRFFSNIVYFILVR
                     LVYHNKSDADDIKVIFIDNIKKPVGFLLICYAISLCLTIATYPAPLSINLSNLFHIVY
                     AVLIAWLILRILDGYGVVLVSKLAQKSGKKEVVNLVIKILYFVIFVIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGVEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLENCVK
                     DLKELLYTSPLVAHEDDGALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(4182..4817)
                     /locus_tag="ACJE1S_001630"
     CDS             complement(4182..4817)
                     /locus_tag="ACJE1S_001630"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HGG0807159.1"
                     /translation="MDNLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGQDYLATTSAIEYALNSLRIKNIVVCGHSN
                     CGGCNALYYSDEELDKIPNVKKWLTMLDPIKRDVTIFARDDIAMRSWLTEKLNLVNSL
                     QNIFTYPGVQEALDEGRLEVHAWYYIIETGEIYEYDFKTKIFKLIQNRKMQ"
     gene            4976..5671
                     /locus_tag="ACJE1S_001631"
     CDS             4976..5671
                     /locus_tag="ACJE1S_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HGG0807160.1"
                     /translation="MSLYDRDYSRSREFENTRSSELGIFIKQTYQLFAASLLAATVGA
                     YVGIYALAAFFIQSQVTFWILFAVEIGLLIALQFKKREAPLNLILLFGFTFCSGLTLT
                     PLLISVLALPAGGVIIAQAFALTTVAFAALSIFAMNTKKDFTLMGKALFIVLIVVVAA
                     SLLNIFFQSSLLNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            5778..6134
                     /gene="secG"
                     /locus_tag="ACJE1S_001632"
     CDS             5778..6134
                     /gene="secG"
                     /locus_tag="ACJE1S_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HGG0807161.1"
                     /translation="MITLLTILQFVIVVIICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFIMGILLIANTIGLGYLYNSTSKDSLAEKIKIETNTSIPTAPNAINVP
                     AIPSAPQIPNESNTSK"
     gene            6151..6708
                     /gene="frr"
                     /locus_tag="ACJE1S_001633"
     CDS             6151..6708
                     /gene="frr"
                     /locus_tag="ACJE1S_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HGG0807162.1"
                     /translation="MINEILNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHIQVDY
                     YGSLTPLNQVATVLASDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFF
                     PPMTREQREENVKQAKAMGEKAKVSVRNIRKDANDAVKKLEKDKAISEDEAKKAYDEV
                     QKLTDTYTAKIDESVKNKESELLKV"
     gene            6711..7319
                     /gene="pyrE"
                     /locus_tag="ACJE1S_001634"
     CDS             6711..7319
                     /gene="pyrE"
                     /locus_tag="ACJE1S_001634"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HGG0807163.1"
                     /translation="MDLEQIYKDCGAYLQGHFLLSSGKHSEFYLQSAKVLENPKLAAR
                     LCDELAKIIAEFNIEFDSICSPALGGILAGYELARACDKRFIFTERVNGEMTLRRGFE
                     VKEGERFIICEDIITTGGSALESAKIIESLGGKVLGFAALANRGFCAVENLKNPRKPS
                     AKLPDNLPLFTLGNFDFQIYDENDCPFCKEGSKAIKPGSRGN"
     gene            7320..>7571
                     /locus_tag="ACJE1S_001635"
     CDS             7320..>7571
                     /locus_tag="ACJE1S_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG0807164.1"
                     /translation="MKTKAKIASRWLRFRALLIDIFLIYVPILYLFYFLLGSKEAFLN
                     NSYITALCTFLFGFIQALFLASKAQSPGLKAYDLYLIDLK"
BASE COUNT         2679 a         1196 c         1238 g         2458 t
ORIGIN      
        1 tactttaata ttcatatttt tgctataatt tttaaactag aatttatatt tttctgttat
       61 tatccatttt cataaaaaga taaaaaatat ccgaattaaa atttaaggaa attaaagtga
      121 aagtatattt agataataat gcaacaacga tgcttgatcc aagcgcatac gaattaatgt
      181 tgccattttt aaaagacatg tatggaaatc caaacagtct tcaccaatgg ggcagcgcaa
      241 ctcatcctgc cctaagagaa gctatggata aactttatgc gggacttggc gcaaatgatt
      301 tagatgatat agttataaca tcctgtgcta ctgaaagtat caactgggtg cttaagggta
      361 tatattttga tcatatttta gataaagaac gcaatgaagt gattatctct agcgtagaac
      421 accctgctgt tgctgctgct gcttattttt taaaaagtct tggagtaaaa gtcatagaac
      481 ttcctgtaaa tgaagaagga gtttctactg tagaagattt gcgtaaagtg attagcgata
      541 aaacagcact tgtaagtgtt atgtgggcta ataatgaaac aggaatgatt tttgatattc
      601 aaaaaatggc agaaattgct catgaatttg gagcgctttt tcatacagat gctacccaag
      661 cagtaggaaa aatcaaagta aatttaaacc aagtaggagt tgattttgct tcattttcag
      721 ctcataaatt ccatggacca aaaggtgtag gtggactttt tatcaaaaaa ggacttaagc
      781 ttactccact tttacacggt ggagaacaca tgggtggtcg tagaagcggg actttaaatg
      841 tgccttatat agtggctatg ggcgaggctt tgcgtattgc aaatactatg cttgattttg
      901 aagattctca tatacgccgt ttaagagata aactagaaga tcaaatttta gccttgcctg
      961 atacaacagt ggttggaaaa agagaacacc gtgtgcctaa tacaatctta gcaagtatta
     1021 aaggagttga aggcgaagca atgctttggg atttaaataa aaatggtata gctgcaagta
     1081 cgggctcagc ctgtgcaagt gaagctttag aaagcaatcc tatcatggaa gcaatcggag
     1141 ctgaaaatga cttagcacat acagctttaa ggctttcttt gtcacgtttt aacactgaag
     1201 aagaaattga ttatgcagca aaacaaatta aaaatgcaac acagagatta agagcaattt
     1261 cttgtactta tgcttataat ccaaataatt acaaataagg atgaaaaatg ggaaaaaata
     1321 gtttaattgg tggatccatt tgggatgagt attcacaaaa agttcaagat agaatgaata
     1381 atcctcaaca tatgggagaa tttagtgaag aagatgctaa agcacgcaat gcaaaattga
     1441 tcgtagctga ttttggtgca gaaagttgcg gcgatgcggt aagacttttt tggcttgtag
     1501 atgaaaaaac tgataaaatt atcgatgcaa aatttaaaag ttttggttgt ggtacagcta
     1561 tagcaagtag tgatactatg gtggatcttt gtataggaaa aactgtagat gaagcagtaa
     1621 aaatcacaaa tttagatgtg gaatttgcta tgcgtgataa tccagaaact ccagctgttc
     1681 cacctcaaaa aatgcactgt tcggttatgg cttatgatgt aatcaaacaa gcagcagcgc
     1741 attataaagg tataagtcct gaagattttg aagatcaaat tatagtttgc gagtgcgcta
     1801 gggtaagtct tggaactatt aaagaagtga ttaaacttaa tgatttacac actgtagaag
     1861 aaatcacaca atatactaaa gcgggtgctt tttgtaaatc ctgtatcaaa ccaggcggac
     1921 atgaaaaaag agattattac cttgtagata ttttagctga aactagagct gaaatagata
     1981 gagaaaaact caaaaataca atgaaaagtg atgtagcttt tgatgaaatg accgtagtgg
     2041 gacaattaaa agcagttgaa agtgttttag atgctgaaat tcgccctatg cttcataatg
     2101 atggtggaga tttggaagtg attgatatac aaaaggctga aggtgcagca attgatgttt
     2161 atattcgtta tcttggtgct tgtagtggtt gttctagtgg aagtggtgca acactttatg
     2221 ctattgaaac aattttacaa gaagaattaa gtccaaatat acgcgttatg ccggtttaaa
     2281 aaatagcaag ataaaatctt gctattttat agcttttgct tgcaaatcaa ggggtggtaa
     2341 attttctata taaatactac gacttgggaa agcaaaggtt aaaccatttt tttcaattat
     2401 acgcataaac tcaagcatta aactttgtct agcttctcta aaatcttttc cacctatttc
     2461 tttgatataa aaataaagct ctatattaat actactatct gcaaattcac ttaaagccac
     2521 ataacaagca tttttataac cctcaagatc attgatagaa actaaatttt gacgatattt
     2581 tgttgtatga tcgccatact ttaatgctcc atcatcttca tgtgctacta aaggacttgt
     2641 atataaaagc tcttttaaat ctttcacaca attttctaat ttttcaggag tagcatcata
     2701 accaacaccc aaatacattc taacatgacg ccccatgcgt cttttactcc aatttttgat
     2761 attagctccc ataatagttg aatttggtaa aaatacaaga caattatcaa aagttctaat
     2821 agtagttttt ctaagccctg tttcaaccac cgttccttct actccagaaa cctcaaccca
     2881 atccccttga ttgaaactat tatcaaaaag taagagtata gaagcaaaga aatttgcaat
     2941 gatatctttc gccgctaaag caacagctaa accaccaatt cccaaagatg caataatagc
     3001 cgagatatta aaaccaagtt gtgctaaaat ataaagaagt gcgatcacaa aaataacaaa
     3061 atataaaatt ttaatgacta aatttaccac ttcttttttg ccactctttt gtgcaagttt
     3121 tgaaaccaaa accacgccat atccatcaag tatccttaaa atcaaccaag cgattaaaac
     3181 agcataaact atgtggaaaa gattacttaa attaatactt aaaggagcag gataagttgc
     3241 tattgtaaga caaagtgaaa tggcataaca aataagcaaa aaacccacag gttttttaat
     3301 attgtctata aaaataacct taatatcatc tgcatcgctt ttattgtgat aaactaaacg
     3361 aacgaggata aaataaacta tatttgaaaa aaagcgtctt aaagacataa aaaaaactaa
     3421 aactaaaatc gaaataacta tcttacccgt atttataaaa tcaatattgg ccatttcatt
     3481 gatacgatct atccatactt gaagttcaag caaagaaaaa atataattac tttctaacaa
     3541 atctgcattc gcacgcaaat attttaaaat ttctacataa gcatccacag cattaaaaat
     3601 catttcttct ttattggaaa ttttctctaa ttcagatgga ttattgattt tagctttata
     3661 aatactaaga tctatattgg ttgaattttg caaattttcc attgccttat cgaccgtaga
     3721 gattatactt tcactatttg ctgcattttt aaaaagtctt tcaagctcaa ataaagacga
     3781 ataaaaactt ttaacaacat ctaaatacat aatatttaag gttgtatcta cataaacata
     3841 aggtttgttt atgctcttct tttgtaaatc taacaaattt tgccttgttt ttaaaaagct
     3901 ttctactgct ttttcattga tttgttgctt tactatcata tcgggtattt tagaaagaat
     3961 agacttttta tctttttcaa attcgcttaa aattccatca taggaacttg aattttcatc
     4021 attatttttt ttaaattctt taatttggcg atttaaatcg atatattttt gcaccaaact
     4081 ataaacactc ttatcttgcg cacttgcatt ggtatctata agacgaaatt catcccccca
     4141 aagacatgaa atacctaaaa gaaacaaaat gattattttt ttcattgcat tttcctattt
     4201 tgaattaatt taaaaatttt agtcttaaaa tcatactcat atatttcacc cgtttcgatg
     4261 atataatacc aagcatgcac ttctaatctt ccctcatcta aagcttcttg cactccagga
     4321 taggtaaaaa tattttgcaa agaattcact aagttaagtt tttcagtaag ccaagaacgc
     4381 atagctatat catctcttgc aaagatcgta acatcccttt ttataggatc aagcatagtg
     4441 agccattttt ttacattagg aattttatcc aattcttcat cagaatagta taatgcatta
     4501 caaccaccac aattactatg tccacataca acgatattct taatgcgtaa agaatttaaa
     4561 gcatattcta ttgctgaagt agttgctaaa taatcctgac ccacgcgata aggtgggaca
     4621 atatttgcaa tatttcgtat cacaaaaagc tcacctgggc ctgtattggt gattaaattg
     4681 gggatcactc tagaatcaga acaacctatg aaaagagtat gaggattttg cttattttta
     4741 agactttcaa aaagttcttc atgctcttta aaatcctctt gcataaattt gatcgcaccg
     4801 ctaataagat tatccatata tcaacctaat tgaaaaatct taaaattata acaaattttc
     4861 agcaaagaat ttcacctaca agcaaacatt cgcaaattaa ctctttatta aattttttat
     4921 gctagagttc gctcaagatt taagttaaaa tcgaaatctt ttaaggagga tgaatatgag
     4981 tctttatgat agagactatt cacgatcaag agaatttgaa aacactcgtt caagtgaact
     5041 tggtattttt attaaacaaa cttatcaact ttttgcggct tctcttttag cagcaactgt
     5101 tggtgcatat gtaggaattt atgctttagc ggcatttttt atacaatcac aagtaacctt
     5161 ttggatactt tttgctgttg aaataggact tttgattgcc ttgcaattta aaaaacgcga
     5221 agctccattg aatttaattt tactttttgg ttttactttt tgttcaggct taaccctaac
     5281 gccattactc atttctgttc ttgccctacc agcaggtgga gtaatcatcg ctcaagcttt
     5341 tgctctaaca acagtagctt ttgcagcgct tagtattttt gctatgaata ccaaaaaaga
     5401 tttcacacta atgggtaaag ctttatttat agttttaatc gtggttgtag cggcttcttt
     5461 gcttaatatc ttcttccaaa gcagtttatt aaatttagct atttcagccg tagcagcgat
     5521 tttattttca ttttatattc tttatgatac acaaaatatt attcgcggaa actatgaaac
     5581 tccaattgaa ggtgctgtag cgctttatct tgattttgta aacctttttg tatctttact
     5641 taatatccta agaagtttca atagtagata attttttgcg ggaaagtccc cgcaaaattc
     5701 ttaaaatttc aaatcttttc aagttttatt tagttacaat atctaactca aaaaattttt
     5761 aaaatttagg aaaatttatg attactcttt taactatttt gcagtttgtc atcgtcgtta
     5821 ttatttgtat agctgtttta cttcaaaaga gctcaagcat aggacttgga gcttatagcg
     5881 gaagcaatga aagtttattt ggagcaaaag gacccgcagg atttttagcg aaatttactt
     5941 tcatcatggg aattttactt attgcaaaca ctataggttt aggatattta tacaatagta
     6001 caagtaaaga ttctttagct gaaaaaatca aaattgaaac aaatacaagc attcctactg
     6061 ctccaaatgc tataaacgtg ccagctattc caagtgctcc acaaatacct aacgaatcaa
     6121 atacaagtaa gtaatttata aggaaaaaat atgattaatg aaattttaaa caaacaaaaa
     6181 actcaaagtg aaaaaagctt agaagcttta aaaaaagatt ttactaccct acgcacaggt
     6241 aaagtcaata cacatatctt agatcatatt caagtagatt actatggctc tttaactcct
     6301 ttaaatcaag ttgcaaccgt tttagcaagt gatgcttcaa caataagcat tactccttgg
     6361 gaaaaaccta tgttaaaaac tatagaaagc gctattgcag cagcaaatat aggggtaaat
     6421 ccaaacaatg atggcgaaag tgtaaaatta ttcttccctc caatgacaag agagcaaaga
     6481 gaagaaaatg taaaacaagc aaaagctatg ggtgaaaaag caaaagtttc ggtaagaaat
     6541 attcgcaaag atgcaaacga tgccgtaaaa aaacttgaaa aagataaagc catttcagaa
     6601 gacgaagcta aaaaagccta tgatgaagtg caaaaactaa cagatactta tactgcaaaa
     6661 atcgatgaaa gtgtaaaaaa caaagaaagc gaacttttaa aggtttaaaa atggatttag
     6721 agcaaattta taaagattgt ggggcttatt tacaaggaca ttttttactc agttcgggta
     6781 agcactctga gttttatctt caaagtgcta aagtcttaga aaatccaaaa ttagcagcaa
     6841 gactttgtga tgagcttgct aaaattatag ccgaatttaa tatagaattt gacagcattt
     6901 gttctcctgc tttgggagga attttagcag gatatgaact tgctagagct tgtgataaac
     6961 gctttatttt taccgaaaga gttaatggag aaatgactct aagacgcggt tttgaggtaa
     7021 aagaaggcga aagatttatc atttgcgagg atatcatcac aacgggcgga agtgctttag
     7081 aaagtgctaa aatcatagaa agcttaggag gaaaagtttt aggttttgca gcattggcaa
     7141 atcgcggttt ttgcgcggtt gaaaatttaa aaaatcctag aaaaccgagt gcaaaactgc
     7201 ctgataattt acctcttttt actttaggaa attttgattt tcaaatttat gatgaaaatg
     7261 attgtccgtt ttgcaaagaa ggaagtaaag ctattaagcc aggaagtcgc ggaaattaaa
     7321 tgaaaactaa ggcaaaaata gcctctagat ggttaagatt tagagctttg cttatagata
     7381 tatttttaat ttatgtccct atcttatatt tattttattt tttattgggc tctaaggagg
     7441 cttttttaaa caactcctat atcacagccc tatgtacttt cttatttggt tttattcaag
     7501 ctttattttt agcctcaaaa gctcaaagtc cagggcttaa ggcttatgat ctttatctaa
     7561 tcgatctaaa a
//
LOCUS       DBBXOW010000077         7466 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.078, whole genome shotgun sequence.
ACCESSION   DBBXOW010000077 DBBXOW010000000
VERSION     DBBXOW010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7466
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.078"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..2316
                     /locus_tag="ACJE1S_001636"
     CDS             <1..2316
                     /locus_tag="ACJE1S_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002835499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol:glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="HGG0807165.1"
                     /translation="KKNIFMILVDDGSTDNSAQIIKKYQKKYPKNIVYLYKENDGQAS
                     ARNLGLKYMQENNYKAPWVTFTDPDDFLDRNYFYEVDKFLATHQDDDICMIGCNIIFY
                     YEKQKIHKDNHPLNFKFKSGVQVKENYNLDSFIQLSAASCFMNIGYLDKLLFDEKLKP
                     NFEDAKFINEYLLKNINLKSAFLPTVKYFYRKRGEGNSTLDNSNKYSDLYLLVSRRGC
                     LKLLQENKFYNIFIQSVCLYHFVWQIKFLINSPEKLYFMDKDEKQRYLELLDENFSYI
                     DNDTIMKFNLASCWFFHKVGILNCFKNEKPPFQIAYIEDYNPYKEQILLTYYTGDDED
                     IESILVDGEEVYADYKKIVKYDFLDRVFCYQKRLWAHIPKNAKDRLEVLINNEQGMVG
                     KYGEYFLDVKNIRKEFQKRLPKSNIWLLMDRDYEADDNAEHLYRYIMQNHPEQEIVFA
                     LRKESSDWERLKKEGFNLVEFGSFEFERIIKKASKVISSHSDEYLIRYITPRQQFIFL
                     QHGVIKDDLSKWLNSKKIDLFITSTKAEYDSIANDYNHYKFGKKEVVLTGLARHDALL
                     KNNQCNARQIIIMPTWRANIVGVALGSSKRGLRSDFTQSEYFQKWNLLNSNILQKLCE
                     KYDYTIVFNPHPNIIPYLKDFNIPSYVKIANHNESLQELFCNSSLMITDYSSVAFEMA
                     YLNKPVIYYQFDHEEFFNSHTYQKGYFDYKKDGFGPVVEDEESLLKELENLLQNDCNP
                     FGIYKDNIDSTFAFKDGKCCERIYKVIKYDK"
     gene            2374..3528
                     /locus_tag="ACJE1S_001637"
     CDS             2374..3528
                     /locus_tag="ACJE1S_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide synthesis protein"
                     /protein_id="HGG0807166.1"
                     /translation="MHRNLESFFSDYRVVILDYSNLHNFLPKDFYDESLYENFSLPKQ
                     ADAIRAAVLYLYGGIWLDADTIITSSKIKYFFENPSNFSIFSSHIGVLKAKKGSIICF
                     NWFQECQKRILNYRKIKESNGDLRQFEAYYYLGNGPLNPNIETFKNNKNEVVIFNRVK
                     NKVIMEAFWRTKDENKEGNAIVNYQEFYFLNDYSDFVLENEAGLLMLHNSWTPYSYKN
                     LNIEDFLICKNTLSGIFLKILNLDFGKMYMDIRDRLYLRSLQANPLSFQSKYGTAKSR
                     IQNQLSYKLGQAMVVNLKSLLGYIRMPFVLSYIKDKHKQEQKIYQEKIKKDPSLKLPP
                     LESYPDYKEALKEKECLTYKLGESLIKANKTWYKGGYVKLWFEIRKLQGS"
     gene            3529..4692
                     /locus_tag="ACJE1S_001638"
     CDS             3529..4692
                     /locus_tag="ACJE1S_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HGG0807167.1"
                     /translation="MKICVVGAGYVGLANALVLCKNNNVVILDVDANKIKQINRKQSP
                     IKDKMIEEYLTNDNKIYATLDKKNAYENCDYIIIATPTNYDENTQYFDTKSIESVMFD
                     IVKFNKDAIVIIKSTIPIGYTKYLKMTFAVKDIIFCPEFLREGNALYDNLYPSRIIIG
                     SKGENAHNVAKIFSSSVLKENTPVLFMDSSEAESVKLFSNTYLAMRVGFFNELDTFAK
                     SNKLNTEDIISGVCADPRIGNYYNNPSFGYGGYCLPKDSKQLLSNFKDIPNALIQAIV
                     QTNDLRKKFIIQEILSKEVDTVGFYRLIMKHESDNFRNSVMLDLINEIQKYKQVVIYE
                     PLIDSKQFNGCEIENDFEKFINRIEMIVANRLDKQLTTYRDKVYTSDIYTSDI"
     gene            4704..5657
                     /locus_tag="ACJE1S_001639"
                     /pseudo
     CDS             4704..5657
                     /locus_tag="ACJE1S_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344531.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            5841..7238
                     /locus_tag="ACJE1S_001640"
     CDS             5841..7238
                     /locus_tag="ACJE1S_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG0807168.1"
                     /translation="MQTKTIGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGST
                     DENSLNIAKEYTLKDKRITLFDKKNGGQSTARNVGIEYFSGEYKLKNKTQTIKENSLI
                     EFNIEGNNPYEIYTVYKSYKAFNNEQDLTSFTYPIIDYIIFLDSDDYWELNCIEECVP
                     RMDGVEVVWFDYRAVYDKVKRKHLSQMTHFDYKNEVIITSKEWLDRAKERRLFYFWFA
                     WQGMVNFTFLKNIKLKFIKGIFAEDCHFGVLLFALSKNIYILPKQIYIYRLRESSSMN
                     FTRKKWAIHPDSHLKKIDIFENLNKARLYYETTSWMQIALEFIKFIHSKHHLSDEVKQ
                     HFLPVVCNKALTLQKFDKDPLYLKKYAKNLKIYIQNQPLGAVSRVKEYLSYKIAKEIS
                     RKKGIMKLTLAFSVVKVSVQHQKEVRRYKKDIKRDVLNKRLPLEFYKDYQRALSLRNQ
                     RLIQMLYNASLKLKG"
     gene            7242..>7466
                     /locus_tag="ACJE1S_001641"
     CDS             7242..>7466
                     /locus_tag="ACJE1S_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807169.1"
                     /translation="MILNSKKLRKLRTNPKLFFKDAIEKKSLWLNNTYKKYLPKKYKG
                     FSQYVIISAVYNVEKYLDDYFNSIINQRLDF"
BASE COUNT         2939 a          833 c         1207 g         2487 t
ORIGIN      
        1 aaaaaaaaca tttttatgat acttgtagat gatggctcta ctgataattc tgcacaaata
       61 attaaaaaat accaaaagaa atatcctaaa aatatcgtct atctttacaa agaaaatgac
      121 ggacaagcta gtgctagaaa tttaggctta aaatatatgc aagaaaataa ctataaagcc
      181 ccttgggtta cttttactga tccagatgat tttttagata gaaactattt ttatgaagta
      241 gataaatttt tagcaactca tcaagatgat gatatttgca tgatagggtg taatataatt
      301 ttttattatg aaaagcaaaa aatacataaa gataatcatc cattaaattt taaattcaaa
      361 agcggtgtac aagttaaaga aaattataat cttgatagct ttatacaatt atctgctgct
      421 agttgtttta tgaatattgg atatcttgat aaattattat ttgatgaaaa actaaaaccc
      481 aattttgaag atgctaaatt tataaatgag tatttattaa aaaatatcaa tttaaaaagt
      541 gctttcttgc caacagtaaa atatttttat agaaaaagag gtgagggaaa ttctacttta
      601 gataattcta ataaatattc cgatttatat ttattagttt cacgtagagg ttgcttaaaa
      661 cttttgcaag agaataaatt ttataatatt tttattcaaa gtgtttgttt atatcatttt
      721 gtttggcaaa ttaaatttct tattaattcg cccgaaaaat tatatttcat ggataaggat
      781 gaaaaacaga gatatttaga attgctagat gaaaattttt cttatataga taatgacacc
      841 ataatgaaat ttaacttagc aagctgctgg tttttccata aagtaggaat tttaaattgc
      901 tttaaaaatg aaaaaccacc atttcaaata gcttatatag aagattataa cccttataaa
      961 gagcaaattt tacttactta ttacactgga gatgatgagg acatagaaag tattcttgta
     1021 gatggagagg aagtatatgc agattataaa aagatagtta agtatgattt tttagataga
     1081 gtgttttgct atcaaaaaag attatgggct catataccaa aaaatgctaa agataggtta
     1141 gaagtattaa ttaataatga acaaggtatg gttggtaaat atggtgaata ttttttagat
     1201 gtcaaaaata ttagaaaaga atttcaaaaa agattaccaa agagtaatat ttggctttta
     1261 atggatagag actatgaagc agatgataac gcagagcatt tatatagata tataatgcaa
     1321 aatcatccag aacaagaaat agtttttgca ttaagaaaag aaagttcaga ttgggaaaga
     1381 ttgaaaaaag aaggatttaa tctagtagaa tttggaagtt ttgagtttga aagaattata
     1441 aaaaaagctt caaaggttat tagctcccat tctgatgagt atttgataag atatattaca
     1501 cctagacagc aatttatttt tttgcaacat ggggtaataa aagatgatct ttctaagtgg
     1561 cttaattcta aaaagataga cttgtttata acttcaacaa aggccgaata tgattctata
     1621 gcaaatgatt ataatcacta taaatttgga aaaaaagaag tggttttaac aggtcttgca
     1681 aggcatgacg ctttattgaa aaataatcag tgtaatgctc ggcaaattat tataatgcct
     1741 acatggagag caaatatcgt tggtgtagct ttaggttcta gcaaaagagg gttgcgaagt
     1801 gattttacac agagtgaata ttttcaaaaa tggaatttat taaatagcaa tatcttgcaa
     1861 aaattatgtg aaaaatatga ttatactata gttttcaatc ctcatcccaa tattatcccc
     1921 tatttaaaag acttcaatat cccttcttat gttaaaatag ccaatcacaa tgaaagctta
     1981 caagaattat tttgtaattc atctttaatg ataactgatt attctagtgt agcttttgag
     2041 atggcgtatc taaacaaacc agtgatttat tatcaatttg atcatgagga attttttaat
     2101 tctcatactt atcaaaaagg atattttgat tataaaaaag atggttttgg tcctgttgta
     2161 gaagacgaag aaagtttatt aaaagagctt gaaaacttac tgcagaatga ttgcaatcct
     2221 tttggtattt ataaggataa tatagattca acttttgctt ttaaagatgg taagtgttgt
     2281 gagagaattt ataaggtaat aaaatatgat aaatgataaa acaatttgga cattttggga
     2341 gcctaaagat aagatgcccg gatatgtaaa actttgcata gaaacttgga aagttttttt
     2401 tcagactata gggttgttat acttgactat tcaaatttgc ataatttctt accaaaagat
     2461 ttttatgatg aaagcttgta tgaaaatttt tcacttccaa agcaggcaga tgctattagg
     2521 gcagcggtgc tatatttata cggtggaatt tggcttgatg ctgacacaat tattacatct
     2581 tccaagatta aatatttttt cgagaatcct agtaactttt ctattttttc gagtcacata
     2641 ggtgtgctta aagcaaaaaa aggttctatt atttgtttta attggtttca agaatgccaa
     2701 aaaagaatat taaattatag aaaaattaaa gaatcaaatg gtgacctaag acaatttgaa
     2761 gcttattatt atcttggaaa cggaccatta aatcctaata ttgaaacatt taaaaacaat
     2821 aaaaatgaag ttgttatttt taatagagta aagaataagg taattatgga agccttttgg
     2881 agaacaaaag atgaaaacaa ggaaggaaat gcgattgtaa attatcaaga attttatttt
     2941 ttaaatgatt atagtgattt tgttttagaa aatgaagcag ggttgttaat gctacataac
     3001 agttggactc cttatagcta taaaaatcta aatattgaag attttctaat ttgcaaaaat
     3061 actctttctg gtatcttttt aaagatttta aatttggatt ttggtaaaat gtatatggac
     3121 ataagggata gattatattt gagaagttta caagctaatc ctttatcttt ccaatccaaa
     3181 tacggcacag ccaaatcccg cattcaaaac caactctcct ataaactagg tcaagctatg
     3241 gtagtaaatt taaaatcttt actaggctat ataagaatgc cttttgtatt atcttatata
     3301 aaagataaac acaaacaaga acaaaaaatt tatcaagaaa aaataaaaaa agatccttct
     3361 ttaaaactac ctcctttaga atcgtatcct gattacaaag aagctttaaa agaaaaagag
     3421 tgtttaacct ataaactagg agagtctttg ataaaagcaa ataaaacttg gtataagggt
     3481 ggatatgtta aactatggtt tgagattagg aaattacaag gaagttaagt gaaaatttgt
     3541 gttgttggtg ctgggtatgt aggtctagcg aatgcattag tgttgtgcaa aaataataat
     3601 gttgtgatat tagatgtgga tgcaaataaa attaagcaaa ttaatcgaaa gcaatcgcct
     3661 atcaaagata aaatgattga agaatatctt acaaatgata ataagattta tgctacattg
     3721 gataaaaaaa atgcttatga aaattgtgat tatattatca ttgccacacc tacaaattat
     3781 gatgaaaata cacaatattt tgatactaaa agtatcgaaa gtgttatgtt tgatattgta
     3841 aaatttaata aagatgctat agttataatt aaaagtacta ttcctatagg ctatacaaaa
     3901 tatttaaaaa tgacttttgc tgttaaggat attatatttt gtccagagtt tttacgagaa
     3961 ggtaatgctt tgtatgataa tttatatcca agtaggatta ttatcggtag taaaggagag
     4021 aatgctcata atgttgcaaa gatttttagt agttctgttt taaaagagaa tactcctgta
     4081 ttatttatgg actctagcga agctgagagt gtaaagcttt tttcaaatac ttatcttgca
     4141 atgagagttg gcttttttaa tgagctagat acatttgcta aaagtaacaa gctaaacacg
     4201 gaagatataa tatcaggcgt ttgtgcagat ccaaggattg gtaattatta taacaaccct
     4261 agttttggct atgggggtta ttgtcttccc aaggatagca agcagttgtt atcaaatttt
     4321 aaagacattc ccaacgcatt aattcaagct atagttcaaa ccaatgattt aagaaaaaaa
     4381 tttattatac aggaaatttt atctaaagag gtagatactg taggatttta tcgattgatc
     4441 atgaagcatg aatcagacaa ttttagaaat tctgtaatgt tggatttaat aaatgaaatt
     4501 caaaaatata agcaagttgt tatatatgaa ccattgatag atagcaagca atttaatggt
     4561 tgtgagattg agaatgattt tgagaaattt ataaatagaa ttgaaatgat tgttgcaaat
     4621 agactagata aacaacttac tacttataga gataaagtct atacaagcga tatttataca
     4681 agcgatatat aaaggtatta acaatgcaaa ctaaaaccgt cggtgtagta atccctatct
     4741 acaatgtaga aaaatattta agagaatgct tagatagtgt tatcaatcaa agctatacta
     4801 acttagaaat catacttgta aatgatggta gcacagatga aaactcatta aacatagcaa
     4861 aagaatatac tttaaaagat aaaagaatta ctctttttga taaaaaaaat ggtggtcaaa
     4921 gtacagctag aaatgtgggc atagaatact ttagcggaga atacaaactc aaaaacaaaa
     4981 cccaaactat caaagaaaat tctttaatag aatttaacat agaaggtaat aatccttatg
     5041 aaatatacac tgtatataaa agctataaag cttttaatga tgaaaaagat ctaacaaaat
     5101 ttacttatcc tattattgat tatattatct ttttagattc tgatgattat tgggaattaa
     5161 actgcataga agaatgtgta cctagaatgg atggggtaga tgtggtttgg tttgccaata
     5221 agcacttata tgataatgta aacattccag aaacaagaca gccaacattg tttgagtatt
     5281 ataactttga taaggagtgt caaataagta gtgaagaatg ggcatctaaa acgcttcaaa
     5341 tgggaagaaa aagtttttgg tttacagtaa tgggaatgat agattttaac tttcttaaaa
     5401 acataaaatt aaaacattat gattatgcaa ttttagaaga taacttattt ggaattttat
     5461 tatttatgca agttagtaaa atttatatac ttcctaagca aatgtataga aacagggtaa
     5521 gaccaaatag cacaatgaat cacgataaaa aagttacagc tagtaatatt ccgctttttt
     5581 tacaaactgt gtattatagc tttgataaag atccggaacg aacaaaagag tattttagag
     5641 ttgcaagttg ggttttgtta aataatcaaa tgaaattatt tttgcaaaat agtcatttaa
     5701 gttattatcg ttgtttatta atgcgagaat ttgtaaaata ttatttttct ttagcaaaac
     5761 ccatttttaa gtataaaaat gacccgctaa atgtttcttc gatttgcttg gaggtatcta
     5821 attatataaa ggtattaaca atgcaaacta aaaccatcgg cgtagtaatc cctatataca
     5881 atgtagaaaa atatctaaaa gaatgtttag atagtgtaat caatcaaact tatactaact
     5941 tagaaatcat actagtaaat gatggtagta cagatgaaaa ctcgctcaat attgcaaaag
     6001 aatatactct aaaagataaa agaatcactc tttttgataa aaaaaatggt ggacaaagta
     6061 cagctagaaa tgtagggata gaatatttta gtggagaata taaactcaaa aacaaaactc
     6121 aaactataaa agaaaattct ttaatagaat ttaatataga gggtaataat ccttatgaaa
     6181 tatatactgt atataaaagc tataaagctt ttaataatga acaagattta acaagcttta
     6241 cttatcctat tatagattat attatctttt tagattctga tgattattgg gaattaaact
     6301 gcatagaaga atgtgtacct agaatggatg gggtagaggt ggtttggttt gattatagag
     6361 cggtgtatga taaagtcaaa agaaaacatc ttagccaaat gactcacttt gattataaaa
     6421 atgaagtgat tatcacttca aaagaatggc ttgatcgagc taaggaaaga agactttttt
     6481 atttttggtt tgcttggcaa ggtatggtaa attttacttt tcttaaaaac ataaaactaa
     6541 aatttatcaa ggggatattt gcggaagatt gtcattttgg ggtgttattg tttgctttga
     6601 gtaaaaatat ttatatactt ccaaagcaaa tatatattta tcgtttacga gagtcaagct
     6661 ctatgaattt tacccgtaaa aaatgggcga tacatcctga ttcgcatttg aaaaagattg
     6721 atatttttga aaatttgaac aaggcaagat tgtattatga gactacaagc tggatgcaaa
     6781 tcgcactaga atttataaaa tttatccatt ctaagcatca tttaagcgat gaagttaaac
     6841 agcatttttt accagtagtt tgcaataaag ctttaacttt acaaaaattt gataaagatc
     6901 cattgtatct aaaaaaatac gccaaaaatt taaaaatata tatacaaaat caacccttag
     6961 gtgcagttag cagagtgaaa gaatatcttt cttataaaat tgcaaaagaa atttctagaa
     7021 aaaaaggtat aatgaaatta acattagctt ttagtgttgt taaggtatct gtacaacatc
     7081 aaaaagaagt gagaagatat aaaaaagata ttaaaagaga tgttttaaat aaaagattgc
     7141 ctttggaatt ttataaggat tatcaaaggg ctttaagctt aagaaatcag cgattaattc
     7201 aaatgttgta taatgcaagc ttaaaattaa aaggctgata tatgatttta aattctaaaa
     7261 agttaagaaa acttagaacg aatccaaaac tatttttcaa agatgctata gaaaaaaaat
     7321 ccttgtggct aaataatact tataaaaaat atcttcctaa aaaatacaaa ggcttttccc
     7381 agtatgtaat aatctcagct gtatacaatg tagaaaaata tttagatgat tattttaatt
     7441 ccatcataaa tcaaagactt gacttt
//
LOCUS       DBBXOW010000078         7455 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.079, whole genome shotgun sequence.
ACCESSION   DBBXOW010000078 DBBXOW010000000
VERSION     DBBXOW010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7455
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.079"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..336
                     /locus_tag="ACJE1S_001642"
     CDS             <1..336
                     /locus_tag="ACJE1S_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807170.1"
                     /translation="CGANPTQDAQLARKWYVDYGGGIKNLGNQTAPKIDLRQAQHFIL
                     TMTAKGAIGIANWGGAGKSGTITVNNAQNITAFSAPFKFRVAQSGFSGTETFAYFCIA
                     SNNVRLVRT"
     gene            338..787
                     /locus_tag="ACJE1S_001643"
     CDS             338..787
                     /locus_tag="ACJE1S_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807171.1"
                     /translation="MNCLLLSNNGIALNLPPSLGGSVTNYNYMLKLDMIYKQAVVLPS
                     NINNKEVVMLGEVWTTGNMSNKTSANTLHITWNNFNSSVELHALSKYYTANAKIKVEK
                     KFNFGNINNLQIMLSSYQSGSANARSGWNLNDGNRLNPRANLTLYWN"
     gene            800..1438
                     /locus_tag="ACJE1S_001644"
     CDS             800..1438
                     /locus_tag="ACJE1S_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HGG0807172.1"
                     /translation="MFYDLKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDGL
                     LKELGFAKVKEEEEAPSFNEKTQKLNQVQNYDEKSNLYIISYEIKEKTLEELKELKLE
                     ELKAIKEEKLLFMPFKNTTFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNK
                     IITFNKEEFLEFGVNIAKYTESIIFKNDELRNKVKNTTSLEELNLIAWESEK"
     gene            1435..1815
                     /locus_tag="ACJE1S_001645"
     CDS             1435..1815
                     /locus_tag="ACJE1S_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807173.1"
                     /translation="MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEA
                     GERTKELISETKNTNVLIREQIAVSRASNDSLIKFIQTHCSKTNDKLEAIETDLMRMD
                     ERLVKLTQIRNDELRMIYKRKENE"
     gene            1812..2285
                     /locus_tag="ACJE1S_001646"
     CDS             1812..2285
                     /locus_tag="ACJE1S_001646"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807174.1"
                     /translation="MKIAFYKVKENDKSTFLDKAIAFFTSSWKERLNGDFLNSYSHCE
                     IILDNLMISSSPRDKGVRIKEFKDTGRWDFIEINDINETKIKEFLYSQIGKKYDFLGI
                     LGFFTFTKDSEDKWFCSEIIIRALQIGGLVKLGDMNAGSSSPNRLYKKLKDTNEN"
     gene            2275..2751
                     /locus_tag="ACJE1S_001647"
     CDS             2275..2751
                     /locus_tag="ACJE1S_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5675 family protein"
                     /protein_id="HGG0807175.1"
                     /translation="MKIKIIRRYTGKTCVIGKFKVFNDDDKLLFECFSLEEDKEGVER
                     NKDLRIPEGIYNLERHTGSSFNISGRKTVAGVKVLKDDDFVINVYNEEVPLDRRILIH
                     WGNSHENTEGCILLGLTKANNNEYITSSRQACKEFYDLMYKKDLSEIKLEIVNELV"
     gene            2748..3188
                     /locus_tag="ACJE1S_001648"
     CDS             2748..3188
                     /locus_tag="ACJE1S_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807176.1"
                     /translation="MSKLISFALSFFSGDKKLYIALGLSLILLGYFYLRLDSTKAKLE
                     KSQSDLALALEINRNNEAKLKELTQIHKAELKAINEANNQKNEVQKKVQYVKEYIYKS
                     NENNLTKLFNNVVDRLWDDNSTSGNKNRNSKSENTTRATNSKPP"
     gene            3085..3303
                     /locus_tag="ACJE1S_001649"
     CDS             3085..3303
                     /locus_tag="ACJE1S_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807177.1"
                     /translation="MWLIGCGTTTQQVVTKIEIQKVKIPQELLTLSPLEKPKAKNELD
                     ILNAYSMLFYKYKQCEIQISKIKELNNE"
     gene            3296..3922
                     /locus_tag="ACJE1S_001650"
     CDS             3296..3922
                     /locus_tag="ACJE1S_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807178.1"
                     /translation="MSNTNVDYNKRLEVFKEIYPQILEMSLAEKSPFGEFKKLLEQFG
                     NDNIIRNDTQFQSLAQALVSVGQTIVAQSQNTALQMILGGDENIVNQANINLTNAQIE
                     TEKANANLVKRQTAQIDDELELKEQSVNIDKSLSIEKEKLLQAQTETEKAKPALIARQ
                     TAQIDDNLRIEAAKVTQSVQFGYCTGGLDIPQEIMSLVKEKIENIEKF"
     gene            3925..5655
                     /locus_tag="ACJE1S_001651"
     CDS             3925..5655
                     /locus_tag="ACJE1S_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807179.1"
                     /translation="MLIDEKRLMKNYTLKPAYPSNIGKLDTGEVYKQWFTYAMIGVNK
                     YVELLHKQLIRKGRSYSQNATHPLYPNSYIVKKYNIKSASTAPYDKHSHGNLGLNQFF
                     VGQDPYKPYKGDPSSKNGIYHDICEIRTKYNLGNMQYYYGFPNNLTLLFEKEKAWKYH
                     GKGFFYIDEKINFKDILNKALEGISYEMLINDIEVVIFCQTIQKNNKWIYSSIDDIKI
                     PNIKVENIEFKPLFGKPYKKLCVDVEKFFSDFKELNKSIFRIEKVEITYRIYEKVQKT
                     RESDSGKTYYALTSKKVSFFEVFNSIKEIYKCKYALPLCFYNSFNFVCYEEPYVAFSS
                     LNNTSWGKKDTSVTPSIYPLYRKNSNLPYGRRDRWFALWDSFYYLYVYEKSSKGILSF
                     LAPIVTIVLAVATWWIGGQGAWLGTLIGVSETIASGITLGISLGLAIGSLTGNKTFSI
                     LNAVWGLVNFLGAWGANNWNLAADFTKNTAQIAQEMTTFESTLNIAGNLLSGASKIFD
                     VVQSITANTPDMINEQKGSDLDNNEGGNGSEALELAKDMINPTIWYNFETTDILNEKI
                     EKNRNLIFAF"
     gene            6184..6600
                     /locus_tag="ACJE1S_001652"
     CDS             6184..6600
                     /locus_tag="ACJE1S_001652"
                     /inference="COORDINATES: protein motif:HMM:NF019313.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HGG0807180.1"
                     /translation="MENNQNKQEKLESVNIDKPIEKKEEDLFSRNSVAEQLNTIIKNY
                     KEEDSITFGIIGDWGSGKTSFVNMTLEDFKDDENFIIVKFNPWNISTRKKLISDFFTT
                     LAKEIRKASFPKFKIKNLKKYILMQNLNFYLKYLIN"
     gene            6636..>7455
                     /locus_tag="ACJE1S_001653"
     CDS             6636..>7455
                     /locus_tag="ACJE1S_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase fold protein"
                     /protein_id="HGG0807181.1"
                     /translation="MIADPVASVAMSRASSIINNFNKLLSAEKKGLDEIKNEINTALL
                     NIDIKIIVVIDDLDRLADTDIQEIFQLVRSIADFKNTIYILSYDEEIVSKALDKIQKD
                     KGGKYIEKIVQVPIKLSKVSQENLKDIFIKKLKTIHIKHEALDKDEFIKKIKENNFAD
                     AFKSIRDMERFLNAFKIEVNAINQELYLYDFAVITLLKIFKPRLYDYIYDNRMLFIEQ
                     YNPYDHISSEIKIPENIEQEIKKITKSNKDFTFNLIGSIFPKINNQPQDYSQLIQ"
BASE COUNT         3062 a          922 c         1215 g         2256 t
ORIGIN      
        1 tgtggtgcta atcccacaca agatgcacaa ttggcaagaa aatggtatgt ggattatggc
       61 ggcggaatta agaacttagg aaatcaaaca gcaccaaaaa tagatttaag acaagctcag
      121 cattttatct taacaatgac agccaaagga gctattggta tagcaaattg gggtggagca
      181 ggtaaaagtg gaactatcac tgtcaataat gctcaaaata tcactgcttt ttcggcacct
      241 tttaaattta gagtagctca aagtggattt agtggcactg aaacttttgc ttatttttgc
      301 atagcttcga ataatgtaag attagtaagg acttaaaatg aactgcctcc ttctttctaa
      361 taatggcata gcactaaatt tacctccatc tttaggaggc tcggttacaa attataatta
      421 tatgttaaag ctagacatga tttataaaca agcagtggta ttgccatcaa atattaataa
      481 taaagaagtg gttatgttag gcgaagtttg gacgactgga aatatgtcta ataaaacttc
      541 tgcaaatact ttgcatatca catggaacaa ttttaactct agtgtagaat tgcatgcttt
      601 aagtaaatat tacactgcca atgcaaaaat caaagtagag aaaaaattca attttggaaa
      661 tataaataac ttacaaataa tgctaagttc ttatcaaagt ggtagtgcaa atgcaaggag
      721 tggttggaac ttaaatgatg ggaatagatt aaacccaaga gcaaatttaa cattatactg
      781 gaattaagaa aggataaata tgttttatga tttaaaaaat aaaagtttaa aatatgatga
      841 tattttttta aaagatgtaa aaatacagaa cgaagaaggt gaaattgatg cacaagatac
      901 ttatttctta agtgcttgcg atgatgggct tttaaaagag ctcggttttg ctaaagttaa
      961 agaagaagaa gaagcgccaa gctttaatga aaaaacacag aagcttaacc aagttcaaaa
     1021 ttacgatgaa aaaagtaatc tttatattat ttcttacgag attaaagaaa aaaccttaga
     1081 agagttaaaa gaattaaaat tagaagagtt aaaagcaata aaagaagaaa agcttttatt
     1141 tatgcctttt aaaaatacta catttcaaat tgatactgaa gcaaaaatta atatcagcgg
     1201 aaaagttagc gagataatgt tagcaaatct caataatact cctttggaaa atattgcttg
     1261 gattgataaa gataataaaa tcattacatt taacaaagaa gaatttttag aatttggggt
     1321 taatattgct aaatatacgg aaagtattat ttttaaaaat gatgaactaa gaaataaagt
     1381 gaaaaatacc acatctttag aagaattaaa tttaattgca tgggagagtg aaaaatgagt
     1441 actgaaaata taataaaaga aggtgctata ctcggttctt taagtggatc tgcattatta
     1501 ggattgatgg tttttgtctt agctgggatt gcatggcatt tatataaaac tttacataaa
     1561 gaagctgggg aaagaacaaa agaacttata agtgaaacca aaaatactaa tgttcttatt
     1621 agagaacaaa ttgcagtatc cagagcaagc aatgatagct taatcaaatt tatacaaacg
     1681 cattgctcta aaactaacga taagctagaa gctatagaaa cagatcttat gcgaatggat
     1741 gaaaggcttg ttaagcttac tcaaataaga aatgatgagt taagaatgat ttataaaaga
     1801 aaggaaaacg aatgaaaatt gcattttata aagttaaaga aaatgacaaa tctacttttc
     1861 ttgataaagc aatagctttt tttacttcat cttggaaaga aagattaaat ggagattttt
     1921 taaattccta ttctcactgt gaaataatct tagacaattt aatgattagc tcaagtccta
     1981 gagataaagg agtaagaata aaagaattta aagacactgg cagatgggat tttatagaaa
     2041 tcaatgatat aaatgagaca aaaataaaag aatttcttta ctctcaaata ggaaaaaaat
     2101 atgatttttt aggaattttg ggctttttca cattcacaaa agatagtgaa gacaaatggt
     2161 tttgttctga aatcataata agagcgttgc aaataggtgg tttggttaag ctaggagata
     2221 tgaatgcagg aagttcaagt cctaatagat tatataaaaa actaaaggat acaaatgaaa
     2281 attaaaatca ttagaagata cactggaaaa acttgtgtta taggcaaatt taaagttttt
     2341 aatgatgatg ataaattgct atttgaatgc ttttctttag aagaggataa agaaggagtt
     2401 gaaagaaaca aggatttgag aataccagaa ggcatttata atttagaaag acatacaggt
     2461 tctagcttta atattagcgg taggaaaaca gtagcaggtg ttaaagtttt aaaagatgat
     2521 gattttgtga ttaatgtcta taatgaagaa gtgccacttg atagaagaat tttgatacat
     2581 tggggaaata gccacgaaaa caccgaaggt tgcatacttc taggcttaac aaaagcaaat
     2641 aataacgagt atataacttc tagtaggcaa gcttgtaaag aattttacga tttaatgtat
     2701 aagaaagact tatcagaaat caaacttgaa atcgtaaatg agctagtatg agtaaattaa
     2761 tatcatttgc tttaagcttc tttagcggag acaaaaagct ttatattgct ttaggcttat
     2821 ctttaatttt gttaggatat ttttacttaa gacttgacag cacaaaagct aaattagaaa
     2881 aaagccaaag tgatttagct ttggctttgg agattaacag aaacaatgaa gcaaagctaa
     2941 aagaactcac gcaaattcac aaagcggagc taaaagcaat caatgaagca aataatcaaa
     3001 aaaatgaagt tcaaaaaaag gtgcaatatg ttaaagaata tatttacaaa agcaatgaga
     3061 ataatctcac taagcttttt aacaatgtgg ttgataggct gtgggacgac aactcaacaa
     3121 gtggtaacaa aaatcgaaat tcaaaaagtg aaaataccac aagagctact aactctaagc
     3181 ccccttgaaa agccaaaggc aaaaaatgaa ctagatattt taaatgctta ttctatgctt
     3241 ttttacaaat acaaacagtg tgaaattcag ataagcaaaa taaaggagct aaataatgag
     3301 taatacaaat gttgattaca ataaaagact tgaagttttt aaagaaattt atccgcaaat
     3361 tttagaaatg agcttagcag aaaaatcccc atttggagaa tttaaaaaac ttttagaaca
     3421 atttggaaat gataatataa ttagaaacga tacacaattc cagagcttag cacaagctct
     3481 agtaagtgtt ggacaaacca tagtagcaca aagtcaaaac actgccttgc aaatgatttt
     3541 aggtggagat gaaaatatag taaatcaagc caatataaat ctaacaaatg cacaaataga
     3601 aacagaaaag gcaaatgcaa atttagtcaa aagacaaacc gctcaaatag atgatgaatt
     3661 agagctaaaa gagcaaagtg tcaatataga taaaagctta agtatagaaa aagaaaaact
     3721 attgcaagcg caaacagaaa cagaaaaagc aaagcccgca ttaatagcta gacaaactgc
     3781 tcaaatagat gataacttaa gaatagaagc tgcaaaggtt acacaaagcg ttcaatttgg
     3841 atattgcact ggtgggcttg atataccgca agagattatg agtcttgtta aagaaaaaat
     3901 agaaaatata gaaaaatttt aataatgcta atagatgaaa aaaggcttat gaaaaactac
     3961 actcttaagc ctgcataccc ttcaaatata ggtaagctag atacagggga ggtttataaa
     4021 caatggttta cttatgccat gataggcgta aataaatatg ttgaactttt acataaacaa
     4081 ctcataagaa aaggtaggag ttatagccaa aacgcaacac atcctcttta cccaaactcc
     4141 tatattgtaa aaaaatataa cataaaaagt gcatcgacag ccccttatga taaacatagt
     4201 cacggcaatt tgggcttaaa tcaatttttc gtaggtcaag atccgtacaa accctataaa
     4261 ggagatccta gcagtaaaaa tggaatatat catgacattt gcgagataag aactaaatat
     4321 aatttaggaa atatgcaata ttattatggt tttccaaaca atttaactct tttatttgaa
     4381 aaagaaaaag cttggaaata tcacggaaaa ggattttttt atatcgatga aaaaataaat
     4441 tttaaagata tactcaataa agcattagaa ggcataagtt atgaaatgct tataaacgat
     4501 atcgaagtag ttattttttg ccaaaccatc caaaaaaata ataaatggat atattctagc
     4561 attgatgata ttaaaatacc aaacatcaaa gtggaaaata ttgaatttaa accattattt
     4621 ggaaagcctt ataaaaaact atgcgttgat gttgaaaagt tttttagtga ttttaaggag
     4681 ttaaataaga gtatatttag aattgaaaaa gtagaaataa cttatagaat atatgaaaaa
     4741 gttcaaaaaa ctagagaaag tgattcaggt aaaacatact atgctttaac aagcaaaaaa
     4801 gtatcttttt ttgaagtatt taattctata aaagaaatat ataagtgcaa gtatgcactc
     4861 cccttgtgtt tttacaatag ttttaatttt gtttgttatg aagagcccta tgtagcattt
     4921 tcttctctaa ataatacaag ttggggtaaa aaagatacga gtgttacgcc aagtatatat
     4981 ccactatata gaaaaaactc gaacttacct tatgggcgca gagatagatg gtttgcatta
     5041 tgggatagtt tttattatct ttatgtatac gaaaaatcaa gcaaaggaat tttaagcttt
     5101 ttagcaccta ttgtcactat cgttttagct gtagctactt ggtggattgg cggacaaggt
     5161 gcatggcttg gtactttaat aggagtgagc gaaaccattg cttcaggaat cacactaggg
     5221 attagcttag gtttagccat aggttctcta actggaaata aaacattctc cattcttaat
     5281 gctgtttggg gtcttgttaa ttttctaggt gcttggggtg ccaataattg gaatttagcc
     5341 gctgatttta caaaaaatac agcacaaatc gcacaagaga tgacaacttt tgaatcaact
     5401 ttaaatattg cgggtaattt attaagcgga gctagtaaga tttttgatgt ggtacaaagc
     5461 attacagcta atacccctga tatgataaat gagcaaaaag gtagcgattt agacaacaat
     5521 gaaggcggaa atgggagcga agctttggaa ttagcaaaag atatgattaa tcctacaata
     5581 tggtataatt ttgaaaccac agatatacta aacgaaaaaa tagaaaaaaa tagaaatctt
     5641 atttttgcat tctaaaaagt tattgaccta tatattgact ttgtaaaaat atataaaata
     5701 attatatgta aatataggca atatctctat attgttcaaa tctcgctaac cgcaccattt
     5761 gtaccataag ctactataaa tatcagactt ataaaatata gataaaatag gcatttgtag
     5821 ctatataaag cctaaattaa agttttttcc attaaaatcc attttgaaac ttttttccta
     5881 acttttctcc taacttttta ttttttattc caaaaagtta ggaaaaatcg atacaaagaa
     5941 cctattttaa actacaaatg atatttttca aaaaacatcc aactatctct agatgatttt
     6001 agtaaaaacc taaacaatag atcttaaaaa attatagata gctttttatc tttccttatt
     6061 taaagcaaaa aaccaaaaat attttttacc ctctcaagag tgattagaat acctttggtt
     6121 ctttttatca taaaacatag ttaaaattat atataatctc aaaaaccaaa aggagcttat
     6181 tttatggaaa ataatcaaaa caaacaagaa aaattagaaa gcgttaatat agacaaacct
     6241 atagagaaaa aagaggagga tttgttcagt agaaattcag tagcagaaca actaaataca
     6301 attattaaaa attataaaga agaagatagt attacttttg gaattatagg tgattggggt
     6361 agtggaaaga cctctttcgt taatatgact ttggaggatt ttaaagatga tgaaaatttc
     6421 attatagtga aatttaatcc ttggaatatc tctactagaa aaaaacttat cagcgatttt
     6481 tttacaacgc ttgccaaaga aattcgtaaa gcttcatttc caaaatttaa aattaaaaat
     6541 ttaaaaaaat atattctcat gcaaaattta aatttttatc tgaagtacct aataaactag
     6601 aagatttatc attgttattt aaaatgtcat cttatatgat tgcagatcca gttgcttcag
     6661 tggcaatgtc tcgagcttca agtattatta ataattttaa caaactatta agtgcagaga
     6721 aaaagggttt agatgaaatc aaaaatgaaa ttaacaccgc tttattaaat atagacataa
     6781 aaataatcgt agtcattgat gatcttgata gattggccga tacagatata caagaaattt
     6841 ttcaacttgt aagatctata gctgatttta aaaataccat atatattctt tcttatgatg
     6901 aagagattgt ttctaaagct ttagataaaa ttcaaaaaga taaaggtggt aaatatatag
     6961 aaaaaatagt tcaagttcct attaaattgt ctaaagttag tcaagaaaac ttaaaagata
     7021 tatttataaa aaaactaaaa acaattcata taaaacatga agcattggat aaagatgagt
     7081 ttattaaaaa aataaaagaa aataattttg cagatgcttt taaaagtatt agagatatgg
     7141 agaggttttt aaatgctttt aaaattgaag tcaatgctat aaatcaagaa ttatatttat
     7201 atgattttgc tgtgatcaca ttattaaaaa tatttaaacc tagactttat gattatatat
     7261 atgacaatag aatgttattt attgaacaat ataatcctta tgatcacata agtagtgaaa
     7321 taaaaatccc tgaaaacatt gaacaagaaa taaaaaaaat tactaaatca aataaggatt
     7381 ttacttttaa tctaattggg tctatttttc caaaaataaa taaccaaccg caagattata
     7441 gtcagctaat tcaaa
//
LOCUS       DBBXOW010000079         7423 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.080, whole genome shotgun sequence.
ACCESSION   DBBXOW010000079 DBBXOW010000000
VERSION     DBBXOW010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7423
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.080"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..403
                     /locus_tag="ACJE1S_001654"
     CDS             <1..403
                     /locus_tag="ACJE1S_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG0807182.1"
                     /translation="IEPNSSIKGLFDENMDIIFANQSLYYIPLKELKQNILEFYELLN
                     TGGILFATMMSKKNYYFSHSQKEEKNGLSKVEIKGRLNETSFIHFIDKVEDLENLFQP
                     FETLFLGDYDPINFYNFEGSAHHYVYIGIKK"
     gene            443..1447
                     /gene="legI"
                     /locus_tag="ACJE1S_001655"
     CDS             443..1447
                     /gene="legI"
                     /locus_tag="ACJE1S_001655"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HGG0807183.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAK
                     NCISTKAKKAPYQLKTTASDESQLQMVQKLELDIKAHKELILHAKKCNITFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNALCK
                     NGTKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPHELKTLCTQIRQIQKAMGDGIKKASKSERKNI
                     NIVRKSLVAKKDIQKGEIFNEENLTTKRPANGISAMRYEEFLGKIATKNYKEDELICE
                     "
     gene            1440..2594
                     /gene="legG"
                     /locus_tag="ACJE1S_001656"
     CDS             1440..2594
                     /gene="legG"
                     /locus_tag="ACJE1S_001656"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HGG0807184.1"
                     /translation="MSKRKICIVSATRAEWYLLKNLCREIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQA
                     FEKLESKEFKQILKNFKNPYDNDKNPNKFIKTCLKNVNLDTILHKNFIDL"
     gene            2603..3628
                     /locus_tag="ACJE1S_001657"
     CDS             2603..3628
                     /locus_tag="ACJE1S_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HGG0807185.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKISSKTDIYDFPVLDEKGQI
                     LSIKSVSSLLKTNPNSIVIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIIQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELDFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLVLQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            3625..4527
                     /gene="ptmF"
                     /locus_tag="ACJE1S_001658"
     CDS             3625..4527
                     /gene="ptmF"
                     /locus_tag="ACJE1S_001658"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HGG0807186.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSTKEEFKNTPIYR
                     SLKECDLNEFDLFIIANITTEHFNTLKTLDELVKDKIILVEKPLFEKSQNFTSLKNHI
                     YVAYLLRFHPVIVALKKLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKDLGGGVL
                     LDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFS
                     KFNKREMTIHTLEKSFKADLINNKIEIYHKDQSQKVLNFENDTIKTLQNLHQAVFEKD
                     KELCDLKQALKVLELCDEVRKKNG"
     gene            4520..5227
                     /gene="legF"
                     /locus_tag="ACJE1S_001659"
                     /gene_synonym="ptmB"
     CDS             4520..5227
                     /gene="legF"
                     /locus_tag="ACJE1S_001659"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HGG0807187.1"
                     /translation="MAEILCTICARGGSKGVKNKNIKKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKRKAHLANDRTAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            5227..5997
                     /gene="ptmA"
                     /locus_tag="ACJE1S_001660"
     CDS             5227..5997
                     /gene="ptmA"
                     /locus_tag="ACJE1S_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PtmA"
                     /protein_id="HGG0807188.1"
                     /translation="MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKERLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYGKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDICGTLVFLLSDESRFITGQTLVVDDGWGL"
     gene            5997..>7423
                     /locus_tag="ACJE1S_001661"
     CDS             5997..>7423
                     /locus_tag="ACJE1S_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HGG0807189.1"
                     /translation="MTFTSTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNL
                     DINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK
                     ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILQTSSLDIEFFSNFCSS
                     KPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQF
                     VYNLPSMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSS
                     YPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKT
                     DNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAEN
                     GNSHPDDYQNSANYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLD
                     TKVYNCTEGGARIEGTIEKPFLWAC"
BASE COUNT         2849 a         1100 c         1177 g         2297 t
ORIGIN      
        1 tatagaacca aattctagca tcaaaggact ttttgatgaa aatatggata ttatctttgc
       61 aaatcaaagt ctttactaca tacctctaaa agaacttaaa caaaatattt tagaatttta
      121 cgaactttta aacacaggtg gaatactttt tgctacaatg atgagcaaga aaaattatta
      181 tttctcccac agccaaaaag aagaaaaaaa tggcttgagt aaagttgaaa tcaaaggtag
      241 actaaacgaa acgagtttta tacatttcat cgataaagtc gaagatctag aaaatctttt
      301 tcaacctttt gaaactttat ttctaggaga ttatgatcct attaattttt ataattttga
      361 aggatcagca caccattatg tttatatagg tattaaaaaa taaaattttg cctttatttt
      421 aaggcaaaat aaaggcaaaa ctatgaaaaa aaccctcatc atcgcagaag caggagttaa
      481 tcacaatggt gatttaaatt tagctaaaaa gttaatagaa atcgcagcag attcaggcgc
      541 tgattttgtt aaatttcaaa gttttaaagc caaaaactgt atcagcacaa aggctaaaaa
      601 agcaccctat cagcttaaaa ccacagctag tgatgagagt cagcttcaaa tggtacaaaa
      661 actcgaactc gatattaaag ctcataaaga gcttatctta cacgcaaaaa aatgcaatat
      721 tacctttctt tctactcctt ttgatcttga aagtgtagat cttttaaatg agttaggctt
      781 aaaaatcttt aaaattccaa gcggagaaat caccaatcta ccctatctta aaaaaattgc
      841 aaagcttaat aaaaaaatca tactttcaac aggtatggca aatttaggcg agatagaaga
      901 agctttaaat gcgctttgta aaaatggtac taaacgccaa aatatcactc ttttacactg
      961 tactacagaa taccctgccc cttttgatga agtcaatctt aaagccatgc aaagcttaaa
     1021 agacgctttt aagcttgatg tgggttattc tgatcacaca aggggtatac acatttctct
     1081 agctgcagtt gccttgggag cttgtgtaat agaaaagcat tttactctag acaaaaatat
     1141 gtcagggcct gatcataaag caagcctaga acctcatgaa ctaaaaacgc tttgtactca
     1201 aataagacaa atacaaaagg ctatgggtga tggcataaaa aaagcaagca aaagcgaaag
     1261 aaaaaatatc aacatagtaa gaaaaagttt agtcgctaaa aaagatatcc aaaaaggaga
     1321 aatttttaac gaagaaaatc ttactaccaa acgcccagca aatggtataa gtgctatgag
     1381 atatgaagag tttttgggta agattgctac taaaaactac aaagaagatg agcttatctg
     1441 tgagtaaaag aaaaatttgt atagtcagtg caacaagggc tgaatggtat cttttaaaaa
     1501 atttatgtcg tgaaattcaa aacgataaag atctaagcct tcaaatcatt gctacaggag
     1561 cgcatttaag tcctgagttt ggactcactt ataaagaaat agaaaaagaa tttaaaatca
     1621 ctaaaaaaat ccctatcctg cttgcaaacg atgataaaat aagcctttgt aaaagtatga
     1681 gtttagcttt tagtgctttt agcgatgctt ttgaagactt aaagcctgat atggtggtca
     1741 ttttaggcga tcgttatgaa atgcttagcg tagcaagtgt atgtctattg atgcacatac
     1801 ctttagtgca tttatgtggc ggggagctta ctttaggggc tattgatgat agtataagac
     1861 acagcatttc aaaaatgtca catttacatt ttgtaagtca tgaaatttat aaaaaaaggc
     1921 ttttgcaact tggagaagaa gaaaaaaggg tttttaatat aggatcttta gcttctacta
     1981 tcataaaaaa tatgaatttt ttaaacaaaa aagatttaga aaaagcctta gaaatgaaac
     2041 tagataaaga actttactta atcacttatc atcctttaac cttaaatgta aaaaatactc
     2101 aaaaagagat taaaacctta cttaaaaaac ttgacaccct taaaaacgca agtttgattt
     2161 ttaccaaagc aaatgccgat gaaaacggac ttttaatcaa tgaaattttg caaaattact
     2221 gccaaaaaaa ctcacacaag gctaaacttt ttgataatct tggctcacaa aaatacctaa
     2281 gtcttatgaa aatagccaag gccatgatag gcaattcttc aagtggtatt agtgaaagtc
     2341 ctttttttaa aactccttgc attaatatag gcgatagaca aaaagggcgt ttaagaactc
     2401 aaaatatcat tgattgtgaa attaatgatc ttgatcaagc ttttgaaaaa ttagaaagca
     2461 aagaatttaa acaaatttta aaaaatttta aaaaccctta tgataatgat aaaaatccca
     2521 ataaattcat aaaaacttgc ctaaaaaatg taaatttaga tacaatttta cataaaaatt
     2581 tcatcgattt ataaggctta gtgtggatat aaacaaactc aaactcaccc ctgattctag
     2641 cataaaagaa gctttaaaaa tagtcgggca agagcgcgtt agactaggca ttatagtgga
     2701 taaaaaggat aaatttttag gagtcattag cgattcaaac atcagaaaag ctttaattag
     2761 tggcaaaact ttaaaagata gtatcaagga tatttacact aaaaatccca tcaccataaa
     2821 agaaaacaca agcaaagaac agcttttaaa aatttcatct aaaaccgata tttatgattt
     2881 tcctgtttta gatgaaaaag ggcaaattct ttccataaaa tctgtctcat cgcttttaaa
     2941 aaccaatcca aactccattg tcatcatggc tggaggctta ggatctcgct taaaagagct
     3001 gactaaagat actccaaaac ctatgttaaa agtaggcaaa aaacccattt tagaaagcat
     3061 aatccaaaga cttaaaaatc aaaattttga aaattttatc ttttgtgtga attataaaaa
     3121 acaaatcata gaagattatt ttcaaaaagg gcaaaaattt ggggttaaaa tttcttatat
     3181 taaagagcgt aaaaaactag gtacagcagg ggctttaagc cttataaaac aagaatttaa
     3241 agaaagtttt atcgttatga atgcagacat tttaaccgag cttgatttta atgatctttt
     3301 aaaagcgcat aaaaaatcaa aagctttaat gagcgtttgc gtgcgtgagt ttgagcaaca
     3361 aattccttat ggagtaatca ctcaaaaaca aggttttata gaaaatatag aagaaaaacc
     3421 tacccaaaaa ttcctagtaa gtgcggggat ttatgtactt gaaaatgaaa ttttaaattt
     3481 aattgctaaa aatgaatact tagacatgcc cgaactcatc aaacttgtat tgcaaaaagg
     3541 caaggtaaat acctatatca tcaacgatta ttggattgac attggaaggc cagatgagtt
     3601 tttaaaagcc aatgaggatt ttaaatgaaa gtcttaatca taggctttgg aagcatagga
     3661 aaaaagcatt ttttagcctt aaaaaattta aatcatgaag taagtttgct ttctttaagt
     3721 actaaagaag aatttaaaaa cactccaatt tatcgctctt tgaaagaatg tgatttaaac
     3781 gaatttgatc tttttatcat cgcaaatatc accacagagc attttaacac cttaaaaact
     3841 ttagatgagc ttgtaaaaga taaaatcata ctcgtagaaa aacctttatt tgaaaaaagc
     3901 caaaatttca caagtttaaa aaatcacatt tatgtagcat atttactgcg ttttcatcct
     3961 gtgattgtag ctttaaaaaa acttttaaaa ggtgaaaaaa tttattttgc tagtttggtt
     4021 tgtaattctt atttgcccca ttggagggct ttagactaca ggcaaaatta cagcgctaaa
     4081 aaagatctag gtggtggggt tttactcgat ctttctcatg aaatcgatct agcctttttt
     4141 ctttttggaa acttagagct tatatactcc caaaatgcta aaatttcaga gcttgacata
     4201 acaagcgatg attttgcctt tttggtttta aaaaattcac aaaaagctaa aattcatata
     4261 gaattagact atttttctaa attcaacaaa agagaaatga ccatccatac tttagaaaaa
     4321 agctttaaag ccgatttaat aaacaataaa atcgaaattt atcacaaaga tcaaagtcaa
     4381 aaagtcttaa attttgaaaa cgatacgata aaaacccttc aaaatttaca tcaagcagtc
     4441 tttgaaaaag acaaagaact ttgcgatctt aagcaagctt taaaagtact tgaactttgt
     4501 gatgaagtaa ggaaaaaaaa tggctgaaat tttatgtacc atttgtgcta gaggtggaag
     4561 caagggtgtt aaaaacaaaa atattaaaaa gattaacgaa cttgaaatga tagcttatag
     4621 catcatacaa gctcaaaatt caaagctttt taaacacata gtcataagta ctgatagtga
     4681 tgaaatcgca agtgtagccc aaaaatatgg cgctgaagtt tttttcaaaa gaaaagctca
     4741 tcttgccaat gatcggactg caaaacttcc tgtcatgcgt gatgccttgc taagaagtga
     4801 agagcatttt aaaacgtgtt ttgaaactct catagactta gatgcttcag ccccgcttcg
     4861 ctcaagcctt gatataaaaa aagcttatga aagttttgtt gaaaatgata attccaatct
     4921 catcaccgca gttcctgcta gacgcaatcc ttattttaac ctcgtagaaa tacaaaataa
     4981 caaggtagta aaatccaaag aaggaaattt taccactcgc caaagtgccc caaaatgcta
     5041 tgatatgaac gctagtattt atatctttaa aagggattat cttttagaaa atgatagtgt
     5101 ttttggcaaa aacacagggc tttttgtaat ggatgaaagc acagcttttg atattgatag
     5161 cgagcttgat tttaaaatcg tagagttttt aatctcttta aaaaatttat cgccaaagga
     5221 tttttaatgc ttgaaaataa aatcatcttt gtagcaggag cttgtgggcg tataggtaaa
     5281 gcgctttgtc aaaaaatact tcttagcaaa ggtatcccta tactcgcaga tatcaacaaa
     5341 gaacgcttaa ataaattgca agaaaattta gaaacaaatt ttaaaacaaa acttttaagc
     5401 ttagaacttg atatcactaa acaagaaagc ttacaaaccg cccttcaaaa aagtcaagaa
     5461 agatacggca aaatcgatgc ttttgttaac tcaagctatc cttttggcaa agattggggt
     5521 aaaacgcctt attatgaact caaatacgaa caaatttgcg aaagtttaaa tttacattta
     5581 gcaggcttta tgctagccgc tcaagaattt gtgaaatttt ttaaacaaca aggctatggt
     5641 aatatcatca atcttagctc catcatggga gtttatgcgc caaaatttga aaactatgaa
     5701 ggcacttcca tgcaaagctc tttagaatac agtgtgataa aagcagggat taatcacatg
     5761 agctcttggc tagctaaaga gctttttaat caaaacatac gcgttaatac tctagcaagc
     5821 gggggaattt tagacaatca aaacgaactt tttttaaaag cttatagaaa atgttgtgcg
     5881 agtaaaggca tgttagatgc agatgatata tgtggaactt tggtgttttt acttagcgat
     5941 gagagtagat ttatcacagg gcaaacctta gtagtagatg atggatgggg cttatgatga
     6001 ccttcacctc tactcaaaaa gaactcttta acaaaaacat tgaggcttta agcaatattc
     6061 ttttaaaaga aagtttaaaa gaaattaaat caagtaaatt tgaacttatc ttaggtaaag
     6121 ataatctaga tatcaattta aaagatacaa gtataaaaaa taatgggggg gggtatagtg
     6181 aaaatttact ttatcaagat cccattaaag aattgcaaac tatgctaaac acttataatg
     6241 ataaatatct actttatcct gtattgtatt tttatggttt tggaaatgga attttattta
     6301 aagctttatt gcaaaataaa aatcatcagc atattgttgt ttttgaaaaa gatatagaaa
     6361 tcatttggat aatgtttcat atcttagatt tttcaaatga attgcaaagt gcaagattga
     6421 tgattttgca aacaagttct ttggatatag aatttttttc taatttttgc tctagcaaac
     6481 ctttctttca attttctaga atttattttt tagaactgat gagtcattat tatgaaagat
     6541 ttcatgaaga tattttagga ttgaataaaa aattagcaga aaattttaaa aattctattg
     6601 tttctcatgg caatgatccc cttgatgctc ttcaaggcat agagcaattt gtttataatc
     6661 ttccttcaat gattactcat cctagttata aagaattact ttctaaaaga aagggtataa
     6721 gtgatacagc tatcattgtt tctacaggac catctcttac taaacaattg cctttattaa
     6781 aaaaatatgc tagtaaagct acaatttttt gtgcggattc ttcttatcct attttagcta
     6841 aacatggtat aaaacctgat tatgtttgta tgttggaaag aactgaaatt actgctgaat
     6901 ttttcaatca tgattttgga gaatttgata atggaatttg ttttattatc aaatccatag
     6961 tacatcctaa tgccataaat tacctaacca aaaaaaccga taattttact atagtttcaa
     7021 cctatgcaag ttttatacaa tatttaaaat tagattattt tggatatttt aacatgggat
     7081 ttagtgttgc acatatggct tgttatcttt ccttacattt aaatcataaa aacatcattt
     7141 ttataggaca ggatttagct tatgctgaaa atggcaattc tcatcctgat gattatcaaa
     7201 attcagctaa ttatgaaagt caaatgtatg aacatatttt aaccgaggct tatggtggga
     7261 aagaaaaaat caaaactcac catgtctggc ttatgtttaa acgaaattta gagcaagatg
     7321 tgcaaaaaat acaaaagtat ttagatacta aagtttacaa ctgcaccgaa ggtggagcaa
     7381 ggatagaagg aaccatagaa aaaccttttc tatgggcttg tga
//
LOCUS       DBBXOW010000080         7241 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.081, whole genome shotgun sequence.
ACCESSION   DBBXOW010000080 DBBXOW010000000
VERSION     DBBXOW010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7241
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.081"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            64..139
                     /locus_tag="ACJE1S_001662"
     tRNA            64..139
                     /locus_tag="ACJE1S_001662"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:97..99,aa:Ala,seq:ggc)
     gene            141..216
                     /locus_tag="ACJE1S_001663"
     tRNA            141..216
                     /locus_tag="ACJE1S_001663"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:174..176,aa:Val,seq:gac)
     gene            447..977
                     /locus_tag="ACJE1S_001664"
     CDS             447..977
                     /locus_tag="ACJE1S_001664"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG0807190.1"
                     /translation="MQNFVIEKATQKDLNSILNITKDALNSMKAMNFNQWNEHYPNEE
                     IFKEDIKAQELYLYKEKDEILGFICINEKFEPEFYEQINFKKSYNNLAFYLHRLAIKE
                     NAKGKGVAQKLLNFCETYAKNEGKYSLRADTHSKNIPMNSLFKKLNFEFCGAFHIPCY
                     EDEFFAYEKILNQKAF"
     gene            complement(957..1559)
                     /gene="leuD"
                     /locus_tag="ACJE1S_001665"
     CDS             complement(957..1559)
                     /gene="leuD"
                     /locus_tag="ACJE1S_001665"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HGG0807191.1"
                     /translation="MQKFTTHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVVSIIKQLKESEDKNIEISLFEKKVFFKDQVFS
                     FDLDEFRRTCLLEGLDNIALTLKYEEQIKAYEKNSKSFLV"
     gene            complement(1561..2973)
                     /gene="leuC"
                     /locus_tag="ACJE1S_001666"
     CDS             complement(1561..2973)
                     /gene="leuC"
                     /locus_tag="ACJE1S_001666"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HGG0807192.1"
                     /translation="MTMAKTLYEKVFDSHVVYQKENELPILYIDRHLIHEVTSPQAFS
                     GLKMANRKMARSDLTLATIDHDVSTKSTDLDACSGMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVSPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLISKYGTAKGTGYAIEFCGELIEGLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFEKHCEYWRSLKSDEGAQYD
                     ESIVLDASQIQPQISYGTNPSQVIAINERIPKVSDFINPSDQKSLLDALDYVNLEQDQ
                     SLEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKDVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKASAGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGIICDNRKYLGV"
     gene            complement(2960..4036)
                     /gene="leuB"
                     /locus_tag="ACJE1S_001667"
     CDS             complement(2960..4036)
                     /gene="leuB"
                     /locus_tag="ACJE1S_001667"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HGG0807193.1"
                     /translation="MNTYKIAVLPGDGIGPSVMKEALKILNFVAQKHGFKLETKEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLRHASPLKDEIIQKGVDILCVRELTGGIYFGKQELGKESAYDTEI
                     YTKAEIERITRLAFESARIRNKKVHLIDKANVLASSILWRDVVGQIAKEYEDIKLEYM
                     YVDNAAMQIIKNPSTFDVMLCSNLFGDILSDELAAISGSLGLLCSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEKAARDIENAIAIALERGKMTKDLN
                     ANSYLGTDEMGDCIVEILKENNNG"
     gene            complement(4033..5568)
                     /gene="leuA"
                     /locus_tag="ACJE1S_001668"
     CDS             complement(4033..5568)
                     /gene="leuA"
                     /locus_tag="ACJE1S_001668"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HGG0807194.1"
                     /translation="MKNNKIIIFDTTLRDGEQALGSSLNINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFEAVKNIASKVKNSTICALSRALDKDIDTAYEALKVADSFRIHTFIA
                     TSTLHIQDKLKKDFDEILAMAQRAIARARNYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTMNGLGERAGNCALEEVVMAIKTRSDYLKGFYTDIKCENISKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSSIGLHENRMLMTARS
                     GRAMIKTCLDNLGYDEKTYNLDEVYESFLRLADKKGQVYDYDLEALMFLSYENDEENE
                     LVLEKLSVISGTIPTACVCVRIKEELKTEACTGNGPIEAVFNCISRITGLNPVLKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFISAYNAIYRSLKVEER
                     KAV"
     gene            5915..6544
                     /locus_tag="ACJE1S_001669"
     CDS             5915..6544
                     /locus_tag="ACJE1S_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807195.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRRKEYEIYGPMV
                     DRVYLDNAIYVKVMASGRDVKTDNVPIKTGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLSKASKMNVLVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENTKSAGSFRDTRTYINLVVDKNTDSQICEKLLDDVERYFIGGG"
     gene            complement(6568..7212)
                     /locus_tag="ACJE1S_001670"
     CDS             complement(6568..7212)
                     /locus_tag="ACJE1S_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HGG0807196.1"
                     /translation="MNKKFLSVIVGIALFSSSALAAEESGFFIGADAAYVQTKVKGDL
                     KHNKTGAVFNGDLSSSIPILGLRMGYRFNDLHRLYAAYNYSDEFSDIIRTPNLRIEGD
                     FNTHKFLLGYDFTPEIFKRVRAVAGGYLGYAKTSIDLKTSLLSLSQDFDGFVYGAKIG
                     AIFELGASNEIEVGFKAEQIEYNTRNYYQEAIGSNFYDPRQTNYGLYLGYTYKF"
BASE COUNT         2398 a         1377 c         1007 g         2459 t
ORIGIN      
        1 tttaaattta gttttcagcc aaaaaaaagt aatattgcgc taaaattttt tagaaaattc
       61 taaggggcat tagctcagct gggagagcac aacgctggca gcgttggggt cagcggttcg
      121 aacccgctat gctccaccat ggttccgtag ctcagttggt agagcactac cttgacatgg
      181 tagtggccgt tggttcaagt ccaatcggag ccaccatttt tcatttcttt caatttcttc
      241 aactttcaaa aaatacctta aaagcactat atataaacaa actaaaggat ttttgatttc
      301 aatttattgc ttttgtgtta taatgatttt caattaatta aagttctttt tggggctttt
      361 aaaactcaat agggtttttt gaagaaataa aacttacaaa aaatattaaa gttaaacact
      421 agtatttaca ttacaaaagg atttttatgc aaaattttgt catagaaaaa gctacacaaa
      481 aagatttaaa ttccatactt aacataacaa aagacgctct aaattccatg aaagctatga
      541 attttaatca atggaatgaa cattacccta atgaagaaat ttttaaagaa gatatcaaag
      601 cacaagagct ttatctttat aaagaaaagg atgagattct aggctttatt tgcatcaatg
      661 aaaaattcga acccgaattt tacgaacaaa tcaactttaa aaaatcctac aataatctag
      721 ctttttatct gcaccgtttg gctataaaag aaaatgctaa aggcaaaggc gtggcgcaaa
      781 agctgttaaa tttttgtgaa acttatgcta aaaatgaagg aaaatatagc ttaagagcgg
      841 atactcatag taaaaatatc cctatgaatt cgctctttaa aaaattaaat tttgagtttt
      901 gtggggcttt tcatatccct tgctatgaag atgaattttt cgcttatgaa aaaatcctaa
      961 accaaaaagc tttttgagtt tttctcataa gccttgattt gttcttcata ttttaaagtt
     1021 aaagctatat tatcaagccc ttctagtaaa caggttctac gaaattcatc caaatcaaaa
     1081 gaaaaaactt gatctttaaa aaataccttt ttctcaaata aagaaatttc tatattttta
     1141 tcttcagatt ctttcagttg ttttataatg cttacaacct catctttagc aagctctata
     1201 gtaagcaaac catttcctaa agcattattt ttaaaaatat ctgcaaaaga aggcgcgata
     1261 atagctctta taccataatc caccaaagcc caaggcgcat gctctcttga agagccacta
     1321 ccaaaatttt caaaactcac caaaatagag ctattttgat attctttttt attgagatta
     1381 aaatccatat ttaaaacgct ttctttatcg tctaaataac gcaaatcatg aaataaatgc
     1441 ttaccaaagc cctgctttga aacagcaagt aaaaattgct tagggatgat ttgatctgtg
     1501 tcgatattgg catattccaa aggacaagct atacctttat gagtagtaaa tttttgcatt
     1561 ttaaactcct aaatactttc tattatcaca aataatgcct tctatggcac aggctgctgc
     1621 gcttgcagga ctcattaagt gggtgataga acctttacct tgtctgccta caaaattacg
     1681 atttgaagtt gaagcaactc tttgtcccgc acttgcttta tcatcattca taccaagaca
     1741 cattgaacac cctgcatatc tccactcaca ccctgcttcg ataaaaattt tatcaagtcc
     1801 taaattttca gcttcttttc tcacttgcat agaaccaggc acgattaaag ctttaacatc
     1861 cttgtgaatt ttacgccctt ttaaaatatc cgcagctatc ttaagatctt ctaaacgccc
     1921 atttgtacaa gaacctatga aaacaatatc gatttttacc ccttctaagc tttgatcttg
     1981 ctccaaattc acataatcta aagcatcaag taaagatttt tgatcgcttg gattgataaa
     2041 atcactgact tttggaattc tttcatttat agcaataact tgagaaggat tagttccata
     2101 gctgatttgc ggttgaattt ggcttgcatc aaggactata ctttcatcat attgtgcgcc
     2161 ctcatcgctt tttaaacttc tccaatactc acaatgcttt tcaaattctt ctccctttgg
     2221 agcaaattct ttccctttta tatactcaaa agtaatctca tcaggagcta tcataccgac
     2281 ttttgctcca aattctatag ccatattgca aagtgtcatt ctagcttcca tactcaagcc
     2341 ttctatcaac tctccacaaa attctatagc atagcctgtg ccttttgcgg taccgtattt
     2401 tgatataaga tataaaatca aatccttagc ataaacaccc ttttgaaact gacccttgca
     2461 ttctattttc atagttttaa gttttgcttg ttttaaagtt tgcgtagcca ttacatgctc
     2521 gacctcgctt gtgcctatac caaaagccaa agctccaaag gccccgtgtg ttgcagtgtg
     2581 agaatcccca caaaccaaag ttacacccgg taaagtaaaa ccaagctcgg gacttactat
     2641 atgcactata ccttgatttt tatcgcctag gcctaaaagt ctgactccaa attctttagt
     2701 attttgcatc aaagtcgtaa tttgctcttt tgccatacct gaacaagcat ccaaatctgt
     2761 gcttttagtc gatacatcat gatctatagt tgctaaagtc aaatccgatc ttgccatttt
     2821 acgatttgcc attttaagac ctgaaaaagc ttgagggctt gttacttcgt ggattaaatg
     2881 tctatcgata taaagtatag gaagttcatt ttccttttga taaaccacat gagaatcaaa
     2941 cactttttca tataaagttt tagccattgt tattctcctt taaaatttct actatacaat
     3001 ctcccatttc atcggtgcct aaataagaat tcgcatttaa atccttagtc atttttccac
     3061 gctctaaagc tatggctata gcattttcta tatcccttgc agccttttct tctttaaagc
     3121 tatattttaa catcaaagca gcacttaaaa tttgggctat aggattggct atatttaaat
     3181 gagctatatc aggagctgaa ccacctgctg gctcataaag cccaaaacct ttatcattta
     3241 aactcgcaga acaaagcaag cccaaagatc cacttatagc tgctaattca tcgcttaaaa
     3301 tatcgccaaa aagattagaa caaagcatta catcaaaagt gctaggattt ttaataattt
     3361 gcatagctgc attatctaca tacatgtatt ctagcttgat atcttcgtat tcttttgcaa
     3421 tttgacctac tacatcacgc cataaaatag aacttgctaa aacatttgcc ttatcaatta
     3481 gatgcacttt tttatttctt attcttgcac tttcaaaagc aaggcgtgta atcctttcta
     3541 tctctgcttt agtgtaaatt tcagtatcat aagcactttc tttgcccaat tcttgcttac
     3601 caaaataaat cccgcctgta agctctctaa cgcacaagat atccacacct ttttggataa
     3661 tttcatcttt taagggcgaa gcatgtctta agctttcata aattttacaa ggacgcaaat
     3721 ttgcaaataa attaaaatgc tttcttaaag gtaaaagcga agctctttca ggtctttgat
     3781 ctataggtag attatcccac ttaggtcctc ctactgaacc aaacaaaata gcatcgcttt
     3841 gctcacaaag ctttaaagtc tcatcgctta atgctacccc ataggcatct atacttgccc
     3901 cacctatctt cgcttctttt gtttctaatt taaagccgtg tttttgggcg acaaaattta
     3961 aaatttttaa agcctctttc atcactgaag gccctatgcc atctcctggc aaaactgcta
     4021 ttttataagt attcatactg ctttcctttc ttcaactttt aaagatcgat aaattgcatt
     4081 gtaagcactg ataaaggctt gagctgatgc ttctataaca tctgttgaaa gccctttgcc
     4141 atgaaatttt ctccctttaa attctaaatc cacatccact tgcccttgtg catccacacc
     4201 tgaacttttt gcattaatgc tatatgcttt taaaacaggg tttaagcctg tgattctaga
     4261 gatgcaatta aacaccgctt ctatgggccc atttccggta caagcttcag tttttaattc
     4321 ttcttttata cgcacacaaa cacaagctgt tgggatagtg ccgctgatta cgcttaattt
     4381 ttcaagtact aattcatttt cttcatcatt ttcataactt aaaaacatta aagcctctaa
     4441 gtcataatca taaacctgtc cttttttatc cgcaaggcgt aaaaaactct cataaacttc
     4501 atctaaatta taagtttttt catcatatcc taaattatca agacaagttt taatcatagc
     4561 tctaccgctt cttgcagtca taagcatacg attttcatga agtcctatgc tgctagggct
     4621 tataatttca taagtttgtc tatttttaag tactccatct tgatgaattc cagaactatg
     4681 agaaaaggcg ttacttccta ctatggcttt atgtgaaggt atgctttcat tagtgatagc
     4741 tgaaactaat tttgaagttt tagaaatatt ttcacacttg atatctgtat aaaaaccttt
     4801 taaataatcg cttcttgttt ttatcgccat tacaacttct tccaaagcgc aatttccagc
     4861 cctttcacca agcccattca tagtacattc tatctgtctt gcgccttgta aaatagcact
     4921 taagctattg cctgttgcca tacctaagtc attatgacaa tgcacagaaa tgatagcttt
     4981 gtctatattt ggcactttgt taaataaaat tttgatgata ttagcaaatt cacttggcaa
     5041 ggtatagcct acggtatctg ggatatttat agttttagcg cctgctttta tcgcattttc
     5101 caccataaaa caaagattat ctatcggagt tcttcctgca tcttcgcatg aaaattccac
     5161 atcatcagta tagtttctag ctcttgcaat cgctctttgt gccatagcta aaatttcatc
     5221 aaaatctttt tttaatttat cttgtatgtg caaagttgaa gtggctataa aagtatgaat
     5281 tctaaaagaa tccgccactt ttaaagcctc ataagcggta tctatatctt tatccaaagc
     5341 tctagaaagc gcacaaatgg ttgaattttt tacttttgag gctatatttt ttaccgcttc
     5401 aaaatctcct tgtgaagata caggaaaacc tgcttctatc acatcaacac ctaaattttc
     5461 aagcgctaag gcaatctgta atttttgatt tatatttaaa gaactgccta aggcttgttc
     5521 accatcgcgt aaagttgtat caaaaatgat aattttatta ttcttcatat tttaatcctt
     5581 aaaaaacgag ataaaccgaa tgaattttat taaaaattca aaaacttaaa aacaatagta
     5641 aaataaataa atttcagaaa tgattaaaaa aaataaaaat tttagtttag gatgagtgag
     5701 agttgcagca tcaggttaaa gtgattttct ttattttttt gctctttgac ttgaattgaa
     5761 tttgaatttt taaaaacctg tgtcattgtc gcctccttca taaaattata tagtttcgaa
     5821 tttagcatat ttttagttaa tacacaaaat aaaaatttac aaattaagaa atttattgtt
     5881 ataattgtaa ttttaagtaa caaaaaggat gttgatgtta aaagagcttt tagaaatcaa
     5941 aaaagaaatg gagcctgtta tccatgaagc taatgtaaaa ttaaatgtat tggctcgtga
     6001 agtaatagtt cgtagaaaag agtatgaaat ttacggacct atggtagatc gtgtctatct
     6061 tgataatgca atttatgtta aagttatggc aagtgggcgc gatgtcaaaa ctgataatgt
     6121 cccaatcaaa acaggttttt acatggtttt tgttgctcct gaaaaagaaa gtacaaaaga
     6181 tatcaaaaat aaactcaaag tagcttatga aggacttgat aacaaattta tcgctacact
     6241 tatacgatct tgccaacgct ttaaagagat cataaacaaa acccaagcta ctctatccaa
     6301 agcttcgaaa atgaatgttt tagtaaaaac caacctagga gaagcaagcg cggctcttaa
     6361 atttaacatc accatagaat acaccaaaga aaaccaaaaa ttaacacgcg aaaatacaaa
     6421 atcggcagga agttttagag atactagaac ttatatcaat cttgtagtag ataaaaatac
     6481 tgattctcaa atttgtgaaa aattgctaga tgatgtagaa agatatttta tcggtggggg
     6541 ttgaaatcct accgataaaa tacttcatta gaatttgtaa gtataaccta aatataaacc
     6601 ataatttgtt tgtcttggat cataaaaatt cgaccctata gcttcttggt aataatttct
     6661 agtattgtat tcgatttgtt ctgctttaaa acctacttcg atttcattag aagcgcctaa
     6721 ttcaaatata gcacctattt ttgctccgta aacaaaacca tcaaaatctt gagataaaga
     6781 taataaagat gtttttaaat caatacttgt ttttgcatag cctaaatatc cacccgcaac
     6841 agctcttact cttttaaaaa tttctggagt aaaatcatag cctagcaaga atttatgtgt
     6901 gttaaaatca ccctctattc taagattagg agttcttata atatcactaa attcatcaga
     6961 ataattataa gcagcataca atctatgtaa atcattaaaa cgataaccca ttcttaaacc
     7021 taaaatagga atgctactag ataaatcacc attaaaaaca gcaccggttt tattatgttt
     7081 taaatcccct ttaactttag tttgaacata agctgcatcc gcacctataa aaaaacctga
     7141 ttcttccgca gctaaagctg aacttgaaaa tagcgcaata cccacaatta cacttaaaaa
     7201 ctttttattc ataatttttc ctttaaattg gttttgtaaa a
//
LOCUS       DBBXOW010000081         7084 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.082, whole genome shotgun sequence.
ACCESSION   DBBXOW010000081 DBBXOW010000000
VERSION     DBBXOW010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7084
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.082"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            37..243
                     /locus_tag="ACJE1S_001671"
     CDS             37..243
                     /locus_tag="ACJE1S_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HGG0807197.1"
                     /translation="MPIVNIKLAKPALSKEQKAELIADITELLSTKYNKSKERVVVML
                     EDIESYDIGFGGESVEAIKAKANK"
     gene            240..698
                     /gene="bcp"
                     /locus_tag="ACJE1S_001672"
     CDS             240..698
                     /gene="bcp"
                     /locus_tag="ACJE1S_001672"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HGG0807198.1"
                     /translation="MSVLKVGDEAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTP
                     GCTTEACDFSANYDKFCDKNAVIIGVSPDGVTSHDKFIAKFNLKHILLSDSEKEVAKA
                     YGAWGLKKNYGKEYEGIIRSTFVIDEAGKIAQIYSNVRVKDHALKVLESL"
     gene            698..1789
                     /locus_tag="ACJE1S_001673"
     CDS             698..1789
                     /locus_tag="ACJE1S_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HGG0807199.1"
                     /translation="MLVHICCSVDSHYFIEELRKEYPKEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLKAVKGYEDEPEKGARCEICFDLRMGSSVEFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSPINAQILPASIEARIALYKKVNLLEKKG
                     IKFEIIRQKFLNYRLLSALIKLDKKAVKSHILFYSHFKNHYTRFSLDEKNLNENLKNG
                     IYKSTKDEISFIEFWRFNSDFKNKWKSFEDFLKHPLKIEEEIKWRNKHFGAYDLSPVI
                     VLEKILPTRYEIVAKSEIYYDVKEVIKRT"
     gene            1904..2344
                     /gene="fabZ"
                     /locus_tag="ACJE1S_001674"
     CDS             1904..2344
                     /gene="fabZ"
                     /locus_tag="ACJE1S_001674"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HGG0807200.1"
                     /translation="MIDVMKIQEILPHRYPFLLVDKITELKVGEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMDAKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMQVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
     gene            2355..3146
                     /gene="lpxA"
                     /locus_tag="ACJE1S_001675"
     CDS             2355..3146
                     /gene="lpxA"
                     /locus_tag="ACJE1S_001675"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HGG0807201.1"
                     /translation="MKKIHPSAVIEDGAILGDDVVIEAYAYVSKEAKIGNGVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKDEQKSGVIIGQNSTIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGDNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSKAFKFL
                     FRQGDLKENAQKLLENNESENVNKMCKFILETKRGIPVYRGKNNA"
     gene            3139..4362
                     /gene="clpX"
                     /locus_tag="ACJE1S_001676"
     CDS             3139..4362
                     /gene="clpX"
                     /locus_tag="ACJE1S_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HGG0807202.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKHEHGVDFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKSELQD
                     DDVELFKSNILLIGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQDFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDNEKENSKA
                     LLEKIEPDDLVHFGLIPELIGRLHVITSLNELNEDDMVRILTEPKNAIVKQYQKLFAI
                     DGVNLKFEDDALREIAKLALERKTGARGLRSIIEEIMVDLMFELPEYKNYDIVITKEV
                     VRDGAKALLIKKKIS"
     gene            4376..5416
                     /locus_tag="ACJE1S_001677"
     CDS             4376..5416
                     /locus_tag="ACJE1S_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HGG0807203.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     EKYGSRAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGANLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDTSIVNYVKEKYNLIIGERTGEEI
                     KIAIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            5406..6155
                     /gene="mreC"
                     /locus_tag="ACJE1S_001678"
     CDS             5406..6155
                     /gene="mreC"
                     /locus_tag="ACJE1S_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HGG0807204.1"
                     /translation="MKNKLIFVLVLFFLVFISFYYGGLVKKNVLLVNDTVLEKFYGIK
                     DAITEFFSKHFDQVDQIEQLKARNQELEYAAVLTTSFANQLNRILEDKNSTRYLPQVS
                     LVRVISYVKLNDYKRLWLDFAKVSPNKNKGLIHQGYTIGIAINKDGRAMALLQGDEQC
                     VFSVYIGKNKIPGLIQGEDDKLKVKFIPKWAKINIGDEILTSGLDNIFFSDVPVGIVS
                     AIKDEDMYQSVEVKPYANINIPAYLYIIDSL"
     gene            complement(6150..>7084)
                     /locus_tag="ACJE1S_001679"
     CDS             complement(6150..>7084)
                     /locus_tag="ACJE1S_001679"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807205.1"
                     /translation="SETMLNSKDRTQVILEKSGLSLSKFATILGKDRRTLAKFIENDT
                     VKELDTKSKEKICEFFRYPFKIWESNENEFYTLLNQIENNEIRIIDEGYIGGLKYIFE
                     NENEGSLILHPAFPNPAYRDFIVPLVYQNNDSEEARIYRIKRGEKMRAYSFNASEWYS
                     IKSLLEFCFSPIGNFYTKEQKIQILELMINTFKDNLNKSLYFFDSYDKKIYGLDVFYL
                     SINAKENTMFFKAPLEMLLVEIKNSTLVHKIHEHYTHAKKCPAHILTQDACFIMEILL
                     QCLKDNLDIKESCDILDKKSPYGNLFKKSLSVDL"
BASE COUNT         2510 a          876 c         1413 g         2285 t
ORIGIN      
        1 aagtttgaaa taattataaa aatcaaagga gaaaaaatgc caattgtaaa tattaaacta
       61 gcaaagccag ctttaagtaa ggagcaaaaa gctgaattga tagccgatat aactgagctt
      121 ttaagcacaa aatacaacaa aagcaaagaa agggtagtgg tgatgttaga agatatcgaa
      181 agttatgaca taggttttgg tggtgaaagc gtagaggcca ttaaggcaaa ggcaaataaa
      241 tgagtgtttt aaaagtaggg gatgaggcgc cacaatttga acttttaaat caagatgggg
      301 tgaaaatcgc tcttaaagat tttattggta aaaaagtgat tttatatttt tatcctaagg
      361 acaatactcc aggttgcacc acagaagctt gcgattttag tgcaaattat gataagtttt
      421 gtgataaaaa tgcagtgatt atcggtgtaa gtcctgatgg tgtgacaagt catgataaat
      481 ttattgctaa atttaattta aagcacatat tattaagtga tagcgaaaaa gaagtggcaa
      541 aagcttatgg agcttgggga cttaagaaaa attatggtaa agaatatgaa ggcattataa
      601 gatcgacttt tgttatcgat gaagcgggaa aaattgccca aatttatagc aatgtccgcg
      661 taaaagatca tgcactaaaa gtgcttgaaa gtctttaatg ttggtgcata tttgttgtag
      721 tgtagacagt cattatttta tagaagagct tagaaaagaa tatcctaaag aaaaaattat
      781 aggatatttc tatgatccta atatccatcc tttaagcgaa tatgaattaa gatttttaga
      841 tgtaaaaaga tcttgtgata agctcggtat caagctttat aagggcgagt atgagtatga
      901 aaaatggcta aaagctgtaa aaggctatga agatgagcca gaaaaaggtg caagatgtga
      961 aatttgtttt gatctaagaa tgggttcaag tgtagaattt gcagccaaaa taggagaaaa
     1021 aaagcttaca acaacacttt taacaagccc taagaaggat ttagagcagt taaaaaatgc
     1081 tttgcaaaaa gagtgtgagc cttatggggt ggaattttta gctcctgatt ttcgtaaaaa
     1141 tggaggcact caaaggcaat ttgctttagc aaaaaaagaa atgctttatc atcaaaatta
     1201 ttgtggttgt atttatgggc ttaaaaagca aaagcaagat aaaaacttta ttgatgaatt
     1261 aatgtcacct attaatgctc aaattttacc cgcaagcata gaagctagaa tagctcttta
     1321 taaaaaagtt aatttattag aaaaaaaggg tataaaattt gaaatcataa gacaaaaatt
     1381 cttaaactac cgacttttaa gtgctttaat aaagcttgat aaaaaagccg ttaagagtca
     1441 tattttattt tattctcatt ttaaaaatca ttatacaaga tttagtttag atgagaaaaa
     1501 tttaaatgaa aatttaaaga atggaatcta taaaagcacg aaagatgaaa tcagctttat
     1561 agaattttgg cgctttaatt ctgattttaa aaacaaatgg aaaagttttg aagatttttt
     1621 aaaacatcct ttaaaaatag aagaagaaat taaatggcga aataaacatt ttggagctta
     1681 tgatcttagc cctgttatag tgcttgaaaa aattttacct acaagatatg agattgtagc
     1741 caagagtgaa atttactatg atgttaagga agttataaaa agaacataga tttaaaatat
     1801 tttaaaatca cttaaaattt tgactaaaat tgattggatt aacataattt ttaatgattt
     1861 ttttatataa ttatgttttt taattgtttt taaggccgat ttaatgatag atgtaatgaa
     1921 aattcaagaa attttacctc accgttatcc ttttttgctt gttgataaaa tcacagagtt
     1981 aaaagttgga gaagttgttc gaggatataa aaatatcagc ataagcgatc atgtttttat
     2041 gggacatttc ccaggtcatc ctatttatcc tggagttttg attttagaag gtatggcgca
     2101 aacgggtggg gttttggctt ttgaaagcat ggatgctaag gtagatccaa aaagtaaggt
     2161 tgtatatttt acaggtattg atggagctaa atttagaaat cctgttcgcc ctggagatag
     2221 acttgattat gaaatgcaag tagttaaaaa tcgtggcaat atgtggattt ttaagggtca
     2281 agcttttgta gatggaaatt tggttgcaga agcagaactt aaagctatga tagtagacaa
     2341 ataagagaga atcagtgaaa aaaattcatc ctagtgctgt aatagaagat ggagctattt
     2401 taggtgatga tgttgttatt gaggcttatg catatgtaag caaagaagct aagataggca
     2461 atggggttgt tatcaagcaa ggggcgagaa tactttcaga tactaccata ggtgatcatt
     2521 ctcgtgtatt ttcatatgct atagtaggtg atattcctca agatatatct tataaggacg
     2581 agcaaaaaag cggagtaatt atagggcaaa attctactat tagagaattt gctacgataa
     2641 attcgggtac agctaaaggc gatggtttta ctcgtatagg agacaatgct tttataatgg
     2701 cgtattgtca tatcgcacat gattgccttt taggggataa tattatttta gccaacaacg
     2761 caaccttagc agggcatgta gaactaggag attttaccgt tgtgggtggt cttactccta
     2821 ttcatcaatt tgttaaagtg ggtgagggtt gtatgatagc aggcgcgagt gcgctttcgc
     2881 aagatatagt acctttttgt ttagctgaag gaaatcgtgc aagtattaga agtttgaatt
     2941 tagtaggaat tcgtcgtcgt tttgataagg atgaagtaga taggcttagt aaagctttta
     3001 aattcttgtt tagacagggg gatttaaaag aaaatgctca aaaattatta gaaaataatg
     3061 aaagtgaaaa tgttaataaa atgtgtaaat ttatattaga aacaaaacgc ggaatccctg
     3121 tatatagagg taaaaataat gcctagaaaa tgtagttttt gcaatgaagt ggagaatcca
     3181 caaagaagaa ttttagcaaa tgaaaatgat gatgctttta tttgtgaata ttgtgttgag
     3241 ggggcctata gtattatcta tggggaagaa aaagaattta aagagccaaa acatgaacat
     3301 ggcgttgatt ttaaagatat tactccaaaa gaattaaaag cttatttgga tcgctatgtc
     3361 atagggcaag atagggctaa aaaagttttt agtgtagggg tttataatca ttataaaaga
     3421 cttttcaaat ctgaacttca agatgatgat gtggagcttt ttaaatccaa tatccttctt
     3481 ataggtccta caggtagcgg aaaaacctta cttgctcaaa ctttagctaa atttttggat
     3541 gtacctatag ccatttgcga tgcgacttct ttaaccgaag caggttatgt gggtgaggat
     3601 gtagaaaata ttttaacccg tcttttgcaa gctgctgatg gagatgtgca aagagctcaa
     3661 aaaggtatag tttttatcga tgagattgat aaaatagcta gaatgagtga aaatcgctct
     3721 atcactcgtg atgtgagtgg agaaggcgtg cagcaagctt tgcttaagat tatagaagga
     3781 agcttggtta atattccgcc taaaggagga agaaaacatc ctaatcaaga ttttattcaa
     3841 attgatactt caaatatttt atttgtttgt ggtggtgcat ttgatggctt agaaactata
     3901 cttaagagaa aattaggcga taaggtcgta ggctttttcg ataatgaaaa agaaaatagc
     3961 aaagccttgc ttgaaaagat agagcctgat gatttagtgc attttggcct tatacctgaa
     4021 cttatagggc gcttacatgt tataacttct ttaaacgagc ttaatgaaga tgatatggta
     4081 agaattttga ccgagccaaa aaatgctatc gtaaagcaat atcaaaaact ttttgctatt
     4141 gatggcgtga acttaaaatt tgaagatgat gctttaagag aaattgcaaa attagcctta
     4201 gaacgaaaaa cgggcgctag aggacttaga agtattatag aagaaataat ggtggatttg
     4261 atgtttgagt taccagaata taaaaattat gatatcgtta tcaccaaaga agtggtaaga
     4321 gatggtgcaa aagcgttatt aatcaaaaag aaaataagct aaaaaaggga taaaaatgat
     4381 tttagatcaa cttataggat ttttttcaag cgatatgggt atagacttag gaactgctaa
     4441 tactcttgtt ttggtaaaag ataagggcat agttatcaat gagccttctg ttgtggctgt
     4501 agagagagaa aagtatggtt ctagggctaa aattttagct gtaggaaaag aagctaaaga
     4561 tatggttggt aaaaccccag gaaatatcga agctattcgc ccgatgaaag atggagttat
     4621 tgctgatttt gatatgacag aaaaaatgat tcgttacttt atagaaaaaa ctcaccgcag
     4681 aaaaagtttt ttaagaccta gaatcatcat ttcagtccct tatggcttaa ctcaagttga
     4741 aagaaaggct gttagagaaa gtgccttaag tgcaggtgca agagaagtat ttttgataga
     4801 agaacctatg gcagcagcta ttggggcaaa tttacctata caagaaccta aaggaaattt
     4861 agttgtagat atagggggtg gaacaactga aattggtgtg atttcactag gtgggcttgt
     4921 tatttcaaag tctattcgta ctgcaggtga taagcttgat acaagtatag taaattatgt
     4981 caaagaaaaa tacaatctta tcattggcga aagaacgggc gaggagatta agatcgctat
     5041 tggttcagct atccagcttc caaaagaact ttctatggtt gtaaaggggc gcgatcaagt
     5101 gagtggactt ttaagtcgta tcgagcttac aagtgaagat gttagagagg cgatgaggga
     5161 atatttaaaa gaaatagcag atgctttaaa aatggtactt gaaatgatgc cacctgatct
     5221 tgcaagtgat atagtagaaa atggtgttgt cttaacaggt ggtggagcat tgattcgtgg
     5281 acttgataaa tatttaagtg aaattgttcg cttgccagta tatattgctg atgaaccact
     5341 tttagccgtg gctaagggaa cgggtaaagc tttggaggaa atttcactat tgcaacaatt
     5401 gacgaatgaa gaataagctt atctttgtcc ttgttttatt ttttttagtt tttatatctt
     5461 tttactatgg gggcttggta aaaaaaaatg ttcttttggt aaatgatacg gtgttagaaa
     5521 aattttatgg aattaaggat gctatcaccg aatttttttc caagcatttt gatcaagtag
     5581 atcaaattga acaattaaaa gcaagaaatc aagagctaga atacgcagct gtattaacta
     5641 caagctttgc aaaccaatta aatcgtattt tagaggataa aaattcaaca agatacttac
     5701 ctcaagtttc tttagtaaga gttatttctt atgtaaaatt aaatgattat aaaagattgt
     5761 ggcttgattt tgccaaagta tctcctaata aaaataaagg tttgattcat caaggataca
     5821 ctataggcat tgcgatcaat aaagatggca gagctatggc acttttacag ggtgatgaac
     5881 aatgtgtttt ttctgtatat ataggtaaaa ataaaattcc tggccttatc caaggcgaag
     5941 atgataaact taaggttaaa tttataccca aatgggcaaa aattaatata ggagatgaga
     6001 ttttaacaag tggccttgac aatatctttt tttcagatgt tccagtgggt attgtaagtg
     6061 caatcaaaga tgaggatatg tatcaaagtg ttgaagtaaa accttatgct aacatcaata
     6121 tccctgccta tctttatata atcgatagtt tataaatcaa cacttagact ctttttaaat
     6181 aaatttccat atgggctttt tttatctagg atatcacagc tttctttaat gtctaaattg
     6241 tcttttaaac attgtaataa aatttccatg ataaaacatg catcttgagt taaaatatgc
     6301 gcaggacatt tttttgcatg ggtataatgc tcgtgaattt tatgaactag ggttgagttt
     6361 ttaatctcga ctaatagcat ttccaaaggg gctttaaaaa acattgtatt ttctttagca
     6421 ttgatagaaa gataaaacac atcaagccca taaatttttt tatcataaga atcaaagaaa
     6481 tataaagatt tgttaagatt atctttaaag gtattaatca tgagttctaa aatttgaatt
     6541 ttttgttctt ttgtataaaa atttcctata ggcgaaaaac aaaattcaag taaagacttg
     6601 atagaatacc actcgcttgc attaaaagaa tatgctctca ttttttcacc cctttttatg
     6661 cgatatattc tagcctcttc gctgtcgtta ttttgatata ctaaaggcac gataaaatcc
     6721 ctataagcgg gatttggaaa agcagggtgt aatataagtg aaccttcatt ttcattttca
     6781 aaaatatatt ttaatcctcc gatgtatcct tcgtcaatga tgcgaatttc attattttct
     6841 atttgattta agagtgtata aaattcgttt tcattgcttt cccatatttt aaaaggatag
     6901 cgaaaaaatt cacaaatttt ttctttactt ttggtatcga gttcttttac tgtgtcattt
     6961 tctataaatt tagcaagcgt tctacgatct ttgcccaaaa ttgttgcaaa tttgctcaaa
     7021 cttaagcctg atttttccaa aattacttgt gttctatctt tagaatttaa cattgtctca
     7081 ctct
//
LOCUS       DBBXOW010000082         7038 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.083, whole genome shotgun sequence.
ACCESSION   DBBXOW010000082 DBBXOW010000000
VERSION     DBBXOW010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7038
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.083"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            78..1142
                     /locus_tag="ACJE1S_001680"
     CDS             78..1142
                     /locus_tag="ACJE1S_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG0807206.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPKALAEV
                     NFALTRGVKNIEELDALAKKARNAGLNGVNTYFNPLKKVFEYLNFYKLHSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVIIFFDFLDKQNEEDEKAHIFNIVLKNWGGITGSK
                     GAKLPEFMNEDELKKFLEAIENSDFKNNTIRNKLIIKIIIFTGIRVSEAINIKLKDIS
                     EENELYIIRIRAKGNKYRVVMIKKELIEHLLKDVRVNYLSEDGLLFVNRNGKALTQAY
                     VSRIVEQILFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSER"
     gene            1132..2910
                     /locus_tag="ACJE1S_001681"
     CDS             1132..2910
                     /locus_tag="ACJE1S_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002802099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HGG0807207.1"
                     /translation="MSAETKFAIFGKYFYYDLKFVLKAYNKKQSKKYFKFVQKHKDKY
                     YFLTLVDYEFYKYLQDKNFTSKEAYLSFYAYKKRKKFTAMKVDEENFMPIFKNHLDFK
                     NYEKNFLQVKSAIAKGRSYQVNLTQSFHFDSLLDGFSLFNLLSKRQDTEFKAYIKDEG
                     REILSFSPELFFKIHKRKIITQPMKGTSARSKDLNQDKKNKLFLQKDVKNLSENVMIV
                     DLLRNDLSKLIVKNSMKTKLFKIQSYPTLHQMTSIIKGKLKKDIDYFQIFKALFPCGS
                     ITGAPKLETIKLIEELEARKRGIYCGAIGCIHKNKSKFSVAIRTLEKKQDYQYSVGSG
                     LVWDSKLEEEIKELELKTQFLMPKNFYLFETMYYKKGKILFFKEHLQRILNSALKLNF
                     NTQKLIKDFQEVLSYKSNLKEFKNFNIQALNEKLFHKNHSFFYPSIIKSHHKQAIFKL
                     ILQKDGNYTILENHIKTSDNNILLLSDKPLNSQSDSLYHKSSLRQIYDQKAFLWKENQ
                     CFDIAFFNEKNELCEGSRSNIIIKKDKVLYTPTLQSGLLNGIYRQFLLDLGLIKEKKL
                     FKEDLLNADEIYCINSVRGLQKVSVK"
     gene            2907..3485
                     /locus_tag="ACJE1S_001682"
     CDS             2907..3485
                     /locus_tag="ACJE1S_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HGG0807208.1"
                     /translation="MKKILLIDNYDSFSYTIVFYLKELGYQCKIIKHDEFKKAKDLAR
                     FDFSHLIISPGPNSPTESKLSLKAIQYFKKDKKILGICLGHQCIGEIFGGKITPMPYP
                     MQGKISRLHLKKNAKKSLLFKGIKNKSKICLYHSLHISKMPKSCEILALNDKNIIMAI
                     KHKKYEIYGVQFHPEAILSQNGKKLLKNFMKI"
     gene            complement(3482..4342)
                     /locus_tag="ACJE1S_001683"
     CDS             complement(3482..4342)
                     /locus_tag="ACJE1S_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG0807209.1"
                     /translation="MGVFLVLLGGIFWAISGVLAEYLFKNNYGVDWVSFYRLFCTGIV
                     LILYSLKKIKIFQFKKDELLSFLIFAFFGLLMTQYGYFKAIFYTDAGTATMIQYCAPL
                     LIMIYVCLKDKKMPKIFESMALIFIILALFLLASGGDISNLNLNLWGIFWAILGAFGV
                     AFYSLGARKIIAKYGIFFVMGWSSLIASFILFGILEFKEGLAHYDFALNLYLAQAGII
                     FIGTIGAFCLYLKGVEYIGALRASMIACIEPVAAAFMSFLFLGTRYSFLDLFAFALII
                     LSVILNAKKS"
     gene            4537..5793
                     /gene="murA"
                     /locus_tag="ACJE1S_001684"
     CDS             4537..5793
                     /gene="murA"
                     /locus_tag="ACJE1S_001684"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HGG0807210.1"
                     /translation="MTYLEIQGSQKLQGEVIISGAKNAALPLIASSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKTDFKENTAYLDTSTLDKTVAKYDIVRKMRASILTLGPLL
                     ARFNHCEVSLPGGCAIGQRPIDLHLSALEKMGANIEIKQGYIVASGNLKGAQILFDKI
                     TVTGSENIIMAAALAKGKTKLVNVAKEPEVVQLCEVLAKAGLDIKGIGTDELEIYGTD
                     KELLDFKEFSVIPDRIEAGTYLCAGAITNSKITLKKVNAEHLGAVLAKLHQMGFETLV
                     DNDNITLFPAKEIKATEIMTSEYPGFPTDMQAQFMALALMAKGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALVAKGTSRIHRI
                     YHLDRGYEKLEEKFKALGAKITRLEE"
     gene            5790..6956
                     /locus_tag="ACJE1S_001685"
     CDS             5790..6956
                     /locus_tag="ACJE1S_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HGG0807211.1"
                     /translation="MKNIFQTLAHLQDQIKALNEFELISLEEAKDRVLAKDLYAVKNL
                     PSFDNAALDGYAFNYADVNQALDIKGTILAGDKNTYEIYKNECFKIMTGAKMPKNADT
                     ILMIEDECIEEGKLVIKKPPKQYNAYRYKGEELKKDELLLKKGTRLNARHIALLSSQG
                     LYKIEVVRKIRIGIFSSGDELKEPWQDCDEENIYNANALPLLALFKDCATSYLGIIKD
                     DFNATKKALENANFDLLITSGGASVGEADFMEKALNELGFTPLFKGLKARPARPTKLY
                     QKDKTLVLILPGNPMAAYLSAFIFARKIIALLYGNLENPLQIQAFMGSDLKVKSGRNN
                     LILGNLEKGIFYPFNDNKFGSGMILPLIQSEFLLISEEEKVDFQKDERIMLFKL"
BASE COUNT         2726 a         1002 c         1107 g         2203 t
ORIGIN      
        1 ctaagttgat actaaaatac cttttttagt taaaattgat taaaaacaaa aattataaga
       61 ttttaggaaa agtttttatg aaatatcctt tagattgtga agaaaatttt gaaaagtctt
      121 ttttattttg gcttgcaaaa tatgttaaat ttaaactcaa ctctctttcc aataaagaac
      181 ttaaaaatcc aaaagcccta gcagaggtta attttgcact tacaaggggc gttaaaaata
      241 tagaagagct tgatgccttg gctaaaaaag caagaaatgc gggtttaaat ggggttaata
      301 cttattttaa tcccttaaaa aaagtttttg aatatcttaa tttttataaa ttacactcct
      361 taaagcaaat cgatgaagag cttatagtgg aggttttagc aagtattact ggagctttat
      421 cggatgcgag taaaaaaaac taccgtattg cagtgattat tttttttgat tttttagata
      481 aacaaaacga agaggatgaa aaggcgcata tttttaatat tgtacttaaa aattggggag
      541 gtattacagg aagcaaggga gcaaaactgc ctgaattcat gaacgaagat gagttaaaaa
      601 aattccttga agccatagaa aattcagatt ttaaaaacaa taccatacgc aacaagctta
      661 ttataaaaat catcattttt acaggaattc gtgtaagtga ggctatcaat atcaaactca
      721 aggatattag cgaagaaaac gaactttaca ttataagaat tcgcgccaaa ggaaataaat
      781 accgcgttgt gatgataaaa aaagaattaa tcgagcattt gttaaaggat gtaagagtta
      841 attatttaag tgaagatggc ttactttttg tcaatcgcaa tggaaaagct ttaacacaag
      901 cttatgtaag tcgtattgta gagcaaattt tatttcgcgc aggaattcgc aagcaaaaaa
      961 acggcgctca tatgcttcgc catacttttg ctaccctact ctataaaaaa caaaaagatt
     1021 tggttttggt gcaagaagct ttaggtcatg caagtttaaa tacttcaaga atttatacac
     1081 attttgacaa tgataaatta aagcttgctg cacaagtagc aaaggaatta agtgagcgct
     1141 gaaacaaaat ttgccatttt tggtaaatat ttttattatg acttaaaatt tgttcttaaa
     1201 gcctataata aaaaacaaag taaaaaatac tttaaatttg tgcaaaaaca taaagataaa
     1261 tattattttt taactcttgt ggattatgaa ttttataaat acttacaaga taaaaacttc
     1321 actagcaaag aggcttattt gagcttttat gcttataaaa aaagaaaaaa attcactgcg
     1381 atgaaggttg atgaagaaaa ttttatgcct atttttaaaa atcatttaga ttttaaaaac
     1441 tatgaaaaaa actttttgca agtaaaatcc gctatagcaa aaggacgaag ctatcaggtc
     1501 aatctcaccc aaagttttca ttttgatagc ttgcttgatg gattttcttt gtttaatctt
     1561 ttatccaaaa gacaagatac tgaatttaaa gcgtatatta aagatgaagg acgcgaaatt
     1621 ctttcctttt ctcctgaatt attttttaaa atccataaaa gaaaaataat cacccagcct
     1681 atgaaaggca caagtgcaag atctaaggat ttaaatcaag ataagaaaaa caaacttttt
     1741 ttgcaaaaag atgttaaaaa tttaagcgaa aatgtaatga tagtcgatct tttaagaaac
     1801 gatctttcaa aacttatcgt taaaaacagc atgaaaacaa agctttttaa aattcaaagt
     1861 taccctactt tacatcaaat gacttccatt ataaaaggca agcttaaaaa agatattgat
     1921 tattttcaaa ttttcaaagc tttatttccc tgcggttcga tcacaggagc tcctaaactt
     1981 gaaaccataa aacttataga agaacttgaa gcaagaaaac gcggaattta ttgcggtgct
     2041 ataggttgta tccataaaaa taaaagcaaa tttagtgttg ctatacgcac tcttgagaaa
     2101 aaacaagatt atcaatacag cgtgggaagt ggtttggtgt gggattctaa gcttgaggaa
     2161 gaaattaaag aattggagtt aaaaactcaa tttttaatgc ctaaaaattt ttatcttttt
     2221 gaaactatgt attataaaaa gggtaaaatt ttatttttta aagaacattt gcaaagaatt
     2281 ttaaattctg ccttaaaatt gaattttaac acacaaaaac tcattaaaga ttttcaagaa
     2341 gtgttaagct acaaatccaa tttaaaagaa tttaaaaatt tcaatatcca agctttaaat
     2401 gaaaaacttt ttcataaaaa tcatagcttt ttttatccaa gcatcattaa aagtcatcac
     2461 aaacaggcta tttttaaact tatcttgcaa aaagatggca actatactat cttagaaaat
     2521 catatcaaaa caagtgataa taatatcttg cttttaagtg ataaaccctt aaattcgcaa
     2581 agcgattctt tatatcataa aagttcttta agacaaattt atgatcaaaa agctttttta
     2641 tggaaagaaa atcaatgctt tgatatagct ttttttaatg aaaaaaatga attatgcgaa
     2701 ggttcaagaa gtaatatcat cattaaaaaa gataaagtcc tttatacccc taccctacaa
     2761 agtggacttt taaatggaat ttataggcaa tttttgcttg atttaggact tataaaagaa
     2821 aaaaaacttt ttaaagagga tttgttaaat gcagatgaga tttattgtat caattcggtt
     2881 agaggattgc aaaaagtgag tgtaaaatga aaaaaatttt actcatagat aattatgatt
     2941 ctttcagcta tactatagtt ttttatctta aagaattggg ctatcaatgt aaaattataa
     3001 aacatgatga atttaaaaaa gctaaagatt tagctcgctt tgatttttct catcttatca
     3061 tctctccagg tccaaattct cctactgaat caaaattaag tttaaaagca attcaatact
     3121 ttaaaaaaga taaaaaaata ctaggaattt gtttaggaca tcagtgcata ggcgagattt
     3181 ttggtggaaa aatcactccg atgccctacc ctatgcaagg taaaatttca agattgcatc
     3241 ttaagaaaaa tgctaaaaaa agcctgcttt ttaaaggtat taaaaataaa agtaaaattt
     3301 gtttgtatca ttctttacat attagcaaaa tgccaaaaag ctgtgaaatt ttggctttaa
     3361 atgataaaaa tatcatcatg gcaatcaagc ataaaaaata cgagatttat ggggtgcaat
     3421 ttcaccccga agcaatttta agccaaaatg gcaaaaaatt acttaaaaat tttatgaaaa
     3481 tttaactttt tttagcattt aaaatcacgc ttaagataat taaagcaaag gcaaaaagat
     3541 ctaaaaagct gtatcttgtt cctaaaaata aaaagctcat aaaagcagct gctacaggct
     3601 cgatacatgc tatcatgctt gctcttaaag ctcctatgta ttcaacccct ttaagatata
     3661 gacaaaaagc ccctatagtt cctataaata ttatacctgc ttgggctaaa tacaaattaa
     3721 gagcaaaatc ataatgcgct aaaccttctt taaattcaag tatcccaaaa agtataaaag
     3781 aagcgattaa actagaccaa cccataacaa agaaaattcc atattttgca atgatttttc
     3841 ttgcacctaa agaataaaaa gcaaccccaa aagctcctaa aatagcccaa aaaattcccc
     3901 ataaatttag gtttaaattg cttatatctc caccacttgc aagcaaaaat agagctagaa
     3961 ttataaaaat taaagccata ctttcaaaaa ttttaggcat ttttttatct tttaaacata
     4021 cataaatcat gataagcaaa ggagcacagt attgtatcat agtagcagta cccgcatcgg
     4081 tataaaaaat agctttaaaa tatccatatt gagtcatcaa taaaccaaag aaagcaaaaa
     4141 tcaaaaagga taaaagctca tcttttttaa attgaaatat ttttattttc tttaagctat
     4201 ataaaataag cactatacct gtacaaaaca atctataaaa acttacccaa tctaccccat
     4261 aattattttt aaacaaatac tcagccaaaa ctccacttat agcccaaaaa attccaccca
     4321 gtaaaaccag aaaaacaccc atgatatcac cttgaaaaat aaaatattta tcattacttt
     4381 ttaaatttaa aataatacaa taaaaatcat caaactcgga aaaatttaag ctccaaataa
     4441 atcacaaatt tcaaaacgaa aagcccaagc aataaacttt tacaaagttt aaaaaggtat
     4501 aattaagctt tgaaatttaa aataaggttt atcataatga cttatttaga aatacaaggc
     4561 tcccaaaaac ttcaaggtga agttataata agtggtgcaa aaaatgccgc tttaccccta
     4621 atcgcttcta gtatacttgc aaaaaatgaa gttaaaataa ataatgttcc taatgttgca
     4681 gacattaaaa cactcatttc tttgcttgaa aatttaggcg caaaaactga ctttaaagaa
     4741 aatacagcat atttagatac atcaacactt gataaaaccg tggctaaata tgatatcgtg
     4801 cgtaaaatgc gcgcttctat ccttacttta ggacccttgc ttgctcgttt taatcattgt
     4861 gaagtttcat tgcctggagg atgtgctata ggacaaagac ctatcgattt acacctaagt
     4921 gctttagaaa aaatgggtgc aaatatagaa ataaaacaag gttatatcgt agcaagtgga
     4981 aatttaaaag gagctcaaat tctttttgat aaaattaccg ttacaggcag cgaaaatatc
     5041 attatggcag cagctttagc taagggaaaa actaagcttg taaatgttgc caaagagcct
     5101 gaagtcgtgc agctttgtga agttttagcc aaggctgggc ttgatataaa aggcataggc
     5161 acagatgagc ttgaaattta tggcacagat aaagaacttt tggattttaa agaatttagt
     5221 gtgattcctg ataggattga agcgggaact tatttgtgtg caggagctat tacaaattct
     5281 aaaatcacac ttaaaaaagt aaatgccgag catttaggag cggttttagc aaaactccat
     5341 caaatgggtt ttgaaacttt ggtagacaat gataatatca ccttatttcc tgcaaaagaa
     5401 atcaaagcta cggagatcat gactagtgaa tatcctggtt ttccaaccga tatgcaagca
     5461 caatttatgg ctttagccct aatggcaaag ggtacaagca tcatcgatga aagacttttt
     5521 gaaaatcgct ttatgcatgt aagcgagctt ttaagaatgg gtgcggatat taaattaaat
     5581 gggcatattg ctactatagt gggtggtaaa gaattaaatg ctgcagatgt tatggctacg
     5641 gatttgcgtg cttcttcggc tttgatttta gcagcacttg tggctaaggg cacaagtaga
     5701 atacatagaa tttatcatct tgatcgtggt tatgaaaaat tagaagaaaa atttaaagcc
     5761 ttaggcgcta aaatcacaag gcttgaagaa tgaaaaacat ttttcaaact ttagcgcatt
     5821 tacaagatca aattaaggct cttaatgagt ttgaattaat cagtcttgaa gaagctaaag
     5881 atagggtttt ggctaaagat ctctatgctg taaaaaattt acctagcttt gataatgctg
     5941 cgcttgatgg ctatgctttt aattatgcgg atgtaaatca agctttagat ataaaaggta
     6001 cgattttagc tggagataaa aacacttatg agatctataa aaatgagtgt tttaagatca
     6061 tgacaggtgc aaaaatgccc aaaaatgccg atactatttt aatgatagaa gatgagtgta
     6121 tagaagaagg caagcttgtc atcaaaaagc cacctaaaca atacaacgct tatcgttata
     6181 agggcgaaga attaaaaaaa gatgagcttt tgctaaaaaa aggcacaagg cttaatgcta
     6241 gacatatcgc tctgctctcc tctcaagggc tttataaaat agaagttgta agaaaaattc
     6301 gtattggaat tttttcaagt ggagatgagt taaaagaacc ttggcaagat tgtgatgagg
     6361 aaaatatcta taatgctaat gctttgcctt tgcttgcttt atttaaagat tgcgctacaa
     6421 gttatcttgg tattattaaa gatgatttta atgcaactaa aaaagcttta gaaaatgcta
     6481 attttgatct tttaatcact tcaggtggtg cgagtgtagg agaagctgat tttatggaaa
     6541 aggctttaaa tgaattaggc tttactccac tttttaaggg tttaaaagca cgccctgcaa
     6601 gaccaactaa gctttatcaa aaagataaaa ctttagtatt gattttacca ggaaatccta
     6661 tggcagctta tctttctgct tttatctttg ctagaaaaat catcgcttta ctttacggga
     6721 atttagaaaa tcctttacaa attcaagctt ttatggggag tgatttaaaa gtaaaaagtg
     6781 gaagaaataa tcttatctta gggaatttag aaaagggtat tttttatcct tttaatgata
     6841 ataaatttgg ttcagggatg atactgcctc tgattcaaag cgaattttta ctcatcagtg
     6901 aagaagaaaa agtagatttt caaaaagatg aaagaatcat gctttttaaa ctttaatata
     6961 ttaagatggt tattttaaaa agtggattta ttttaaaaga tattttagat aaatgaaaag
     7021 aaaaataaat ttgtgaag
//
LOCUS       DBBXOW010000083         7014 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.084, whole genome shotgun sequence.
ACCESSION   DBBXOW010000083 DBBXOW010000000
VERSION     DBBXOW010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7014
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.084"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(175..984)
                     /gene="tupA"
                     /locus_tag="ACJE1S_001686"
     CDS             complement(175..984)
                     /gene="tupA"
                     /locus_tag="ACJE1S_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1901238 - ABC-type tungstate transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tungstate ABC transporter substrate-binding
                     protein TupA"
                     /protein_id="HGG0807212.1"
                     /translation="MKKIISLALALALSASAAELRMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKDFVSKGFGVDRTPVMYNDFIII
                     ADKSLAPKFKDKTLKESLELIKNEKLTFISRGDKSGTDNKEKALWKDLGGVPEKESWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGNPNLVIVNEGDDNLKNFYSII
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNVISEFKLLNKPLFIVDAKTRKD"
     gene            1067..1753
                     /gene="tupB"
                     /locus_tag="ACJE1S_001687"
     CDS             1067..1753
                     /gene="tupB"
                     /locus_tag="ACJE1S_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1901238 - ABC-type tungstate transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tungstate ABC transporter permease TupB"
                     /protein_id="HGG0807213.1"
                     /translation="MDYILEGFTQALFLLFNADESVISAIKTTLFSSSISIVLSLIVG
                     FPLGFALGFFEFKLKRFIKLIVDTSLSFPTVAVGLILYALISSRGPLGDLGLLFTVKA
                     LILGQFVLALPIVIALFSNLIENMNKKHFLLIKSLHLSPLKLVMTIIYELRFALVSVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLIFIAFIL
                     NFIIHKLKRY"
     gene            1754..2749
                     /gene="tupC"
                     /locus_tag="ACJE1S_001688"
     CDS             1754..2749
                     /gene="tupC"
                     /locus_tag="ACJE1S_001688"
                     /EC_number="7.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:1901238 - ABC-type tungstate transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tungstate ABC transporter ATP-binding protein
                     TupC"
                     /protein_id="HGG0807214.1"
                     /translation="MIELCNFKFNYGQKNILNIKHLCLDTDKISILMGSNGSGKSTLL
                     RILKFLEGEFDNITYFGNKHLNSDEKRQIYLLFPEPVFLNRSVEKNFYFLLKTYKLDS
                     KEIKKRLNEVLNLLEIDRSLLKKYPSELSSGQGQKIAFALALSVRAKYYLLDEPSAFL
                     DKDTMILFKKAILYMQKTYKSGFLIASHDKNFLDSLAQKKYYLHAGEILEFENTNIFE
                     LENKGVNFSNFIDFSMCKNYICKDEISNKIAIDPYKISFLYPDDFSKQTFDFILQKCI
                     IIALRTRKEFVFIRVECGGKILEFALESERFKQEKLSLYQELCLVFNEEAICFLN"
     gene            2890..4863
                     /gene="acs"
                     /locus_tag="ACJE1S_001689"
     CDS             2890..4863
                     /gene="acs"
                     /locus_tag="ACJE1S_001689"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HGG0807215.1"
                     /translation="MRYQNTQGLFKPNKQLSRNARIKNLCEYYDLCDEVREDFEGFWK
                     RQALEKIDWFSPFSRVLNDDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAAIVFEGE
                     MGDYEVYTYRRLLHEVCKAANLLKRFGVKKGDRVIIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYVKGRDYIYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQVSKFYTSPTAIRMLHADAPDEPKKYDLNTLEVLGTVGEPINP
                     SAWQWFYENIGNSKCSIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNVKDVAEDGLLCITKPWPSMIRGIWGDENRYIESYFSQAKKEGKPVYFSGDGAFY
                     DDNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSVLDAIKGESLFAF
                     VVLNPTSSCDLGGAIETLKELNDILRAEIGPIAKIEKILYTTGLPKTRSGKIMRRILR
                     TIARGEELKQDISTLEDSGVVQSIIDAAKIGIQ"
     gene            4971..5795
                     /gene="galU"
                     /locus_tag="ACJE1S_001690"
     CDS             4971..5795
                     /gene="galU"
                     /locus_tag="ACJE1S_001690"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HGG0807216.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKALPKEMLPILTKPLIHYGVDEAL
                     EAGMDNMGFVTGRGKRALEDYFDISYELEHQISGTNKEYLLKDIRSLIHRCTFTFTRQ
                     NEMRGLGDAVLKGRPLAGDEAFGVILADDLCINEEGVNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSSYGVIAGNFVEEDLIMVNSMIEKPSPQEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFKGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            5789..7009
                     /locus_tag="ACJE1S_001691"
     CDS             5789..7009
                     /locus_tag="ACJE1S_001691"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG0807217.1"
                     /translation="MLNNTLFFKESEIRTISSYANRINDEVESGDIGYYHLIDTSLTL
                     IDESLNFIQDKEHVKNIVLVGMGGSSCGVKALRDMLFDEKSNQRELFILDNTSSHSFS
                     RALEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFIFITDKDSKLH
                     KEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFIHKK
                     DEILQKAYHYCTHKSANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTITFLKIKDSQKAPVIPDIHFKFLDDLSNKVNLHDLL
                     NAQCDATMHALIAENLSVDIIELEKLDAWHTGYLMYYYELFTSACGVMLGINTYDQPG
                     VEVGKLILKNILKS"
BASE COUNT         2296 a          964 c         1329 g         2425 t
ORIGIN      
        1 aaacaatgca agaaaatact caaagacata tacaaaatat aaaaatatca gctctaagcg
       61 gtgtgggaat aatttttatg ctgatatatt ttttatcctc tttttttatc attgttgtat
      121 ttaaaatgaa aaagataaaa tgagttttta agcaaggaaa ttccttgctt gaatttaatc
      181 ttttcttgtt tttgcatcca ctataaataa aggtttgtta agaagtttaa actcactgat
      241 aacattcaaa gtcttatcgc ttgttaccca tttgataaat ttgctagcct ctgtgtaatt
      301 tacattttta caatgctttg gatttgtagc gattatagag tagaaatttt taagattgtc
      361 atcgccttca tttacgatca ctaaattagg attgcctttt tcattggctt cgtatttgat
      421 ataagtgcca cgatcggtta aaatcacgcc ttttttttct tctgcgattt tgatacttgc
      481 taacattcct tgtccgcttt gttgatacca gctttctttt tcgggtacac caccaagatc
      541 tttccaaaga gctttttctt tgttatcagt gcctgattta tcgcctcttg aaatgaaagt
      601 aagtttttca tttttgataa gttctaggct ttcttttaaa gttttatctt taaatttagg
      661 agctaaagat ttatctgcga taatgataaa atcattatac attacaggcg ttctatctac
      721 gccaaaacct ttgctcacaa agtctttttc tgcttttgga gaatgcacaa aaagcacatc
      781 agcattgcaa tcttcaccca tttttaaagc cgcacccgtt cctacagcga cccattttaa
      841 ggtattgcca ctttcttttt catagagcgg ttttaaagca tctaaaagtc ctgtgttatc
      901 ggtgcttgtt gtagttgcca ttctaagttc tgctgcgctt gcacttaagg ctaaggcaag
      961 agctaaagaa atgatttttt tcattttgtc tcctaattaa aattttactt aaaaaatatt
     1021 gtaacataat tatgctaaaa ttacttattt aaaataagga aactttttgg attatatctt
     1081 agaaggcttt actcaagctc tatttttgct ttttaacgct gatgaaagcg ttatttctgc
     1141 aatcaaaaca acacttttta gctccagcat ttctatcgtt ttatctttga ttgtaggttt
     1201 tcctttgggc tttgctttag gtttttttga atttaaattg aagcgtttta taaaacttat
     1261 agttgatacc agtctttctt ttcctacggt tgcggttggg cttatacttt atgctttgat
     1321 ttcaagcaga gggcctttgg gggatttagg cttgcttttt actgtaaaag cattgatttt
     1381 agggcagttt gttttagctc ttcctattgt tatcgcactt ttttctaatt tgatagaaaa
     1441 tatgaataaa aagcattttt tactcatcaa atctttacat ttaagccctt taaagcttgt
     1501 gatgactatc atttatgagt tgcgttttgc tctagtaagc gttgtggctt tagcttatgg
     1561 caggatagtt gctgaagtag gagtagcgat gatagtgggt ggaaatatca aatacgatac
     1621 tagaactatt accacagcca tttcccttga aaccaacaaa ggtgaatttg ctagcggtat
     1681 tgctcttgct ttagttttga ttttcatcgc ttttatttta aattttatta tacacaaact
     1741 caaaagatat taaatgatag aactttgtaa ttttaaattt aattatggac aaaaaaatat
     1801 tttaaatatc aaacacttat gtttagatac tgataaaatc agtattttaa tgggttcaaa
     1861 tggaagtgga aaatctacac ttttaagaat actcaaattt cttgaaggag aatttgataa
     1921 tatcacttat tttggcaata agcatttaaa ttcagatgaa aaacgccaaa tttacttact
     1981 atttcccgag cctgtctttt taaatcgcag tgtagaaaaa aatttttatt ttttgttaaa
     2041 aacttataaa ttagacagca aagagattaa aaaacgcctt aatgaggttt taaatttact
     2101 tgaaattgat agaagtttgt taaaaaaata tcctagcgag ctttcatctg gacaagggca
     2161 aaaaatagca tttgctttag ctttaagtgt tagagcgaag tattatttac ttgatgagcc
     2221 aagtgctttt ttggataaag atacgatgat attgtttaaa aaagctattt tatatatgca
     2281 aaaaacatac aaaagtggtt ttttaatcgc tagtcatgat aaaaatttct tagactcttt
     2341 ggcgcaaaaa aaatattatt tgcatgcagg agagatttta gaatttgaaa atacaaatat
     2401 ttttgaactc gaaaacaaag gtgtgaattt tagtaatttt atagatttta gtatgtgtaa
     2461 aaactatatt tgcaaagatg aaatttcaaa caaaatagct atcgatcctt ataaaatttc
     2521 ttttttatat cctgatgatt tttccaaaca aacatttgat tttatacttc aaaaatgtat
     2581 catcatagca cttagaacaa gaaaagaatt tgtttttatc agagtggagt gtggaggtaa
     2641 aattttagaa tttgccttag aatcagagcg atttaaacaa gaaaaactaa gcttgtatca
     2701 agaactttgc ttagttttta atgaagaggc tatttgtttc ttaaattaac ataatttaga
     2761 aatgttttct ttaatttatt acaaatattc acatttttgt aattttcttc attaattatt
     2821 tttaaatttg tataaaacac aaaaaaagtc ttatataatg tttataaata acttaaagaa
     2881 ggaggattta tgcgttatca aaatactcaa ggacttttta aacctaacaa acaactttct
     2941 cgcaacgcaa gaataaaaaa tttatgcgaa tattatgact tatgcgatga ggtaagggaa
     3001 gattttgaag gtttttggaa aagacaagct cttgaaaaaa ttgattggtt ttcgcctttt
     3061 tctcgtgttt taaatgatga taaagcccca ttttataaat ggtttgaggg tgggacttta
     3121 aatgtaagtt atcagtgctt agatcgccat atgaaaacaa gacgcaataa agctgctatt
     3181 gtttttgaag gggaaatggg tgattatgag gtttatactt atcgtagatt attgcatgaa
     3241 gtttgcaagg cggcaaactt acttaaacgc tttggtgtaa aaaaaggcga tagggttata
     3301 atttatatgc ctatgattcc agaaacggct attgttatgt tagcttgtgc aagaattgga
     3361 gctattcata gtgtggtatt tggaggcttt tcgcctgaag ctttaagaga tagaatcata
     3421 gatgcaggag ccaaacttgt agtaacagcc gatggagctt ttcgtcgtgg caagccttat
     3481 atgttaaaac ctgctgttga taaggctttg agtgaaggtt gtgaaagtgt agaaaaagtg
     3541 cttatagtta tacgcaataa cgaacctata gaatatgtca aaggaaggga ttatatctat
     3601 aatgagttag taaaaaatga atcttataaa tgcgaacctg aaattatgga tagtgaagat
     3661 ttgttatttt tactttatac ttcaggttct acgggcaagc caaaaggagt aatgcatgca
     3721 agtgcaggtt atatactttg ggcgcaaatg actatggaat gggtatttga tataaaagat
     3781 tatgataatt attggtgtag tgcagatgtg ggttggatca caggacatac ttatgttgtt
     3841 tatggccctt tagcatgtgg agcaactact attatgcatg aaggaacgcc tacttatcca
     3901 aattcagggc gttggtggag aatgatagaa gagtatcaag tgagcaaatt ttatacttcg
     3961 cctactgcta taagaatgct tcatgcagat gctcctgatg agcctaaaaa atatgattta
     4021 aacactcttg aagtgcttgg aactgttgga gaacccatca atcctagcgc ttggcagtgg
     4081 ttttatgaaa atataggaaa ttcaaaatgc tccatcgttg atacttggtg gcaaactgaa
     4141 acaggagggc atatgataac acctttacct ggagctactc ctttaaaacc aggttgtgct
     4201 accttgcctt taccaggaat ttttgccgag gttattgatg aagagggtaa tgtaaaagat
     4261 gtggctgaag atggcttgct ttgtattacc aagccttggc cttcgatgat tcgtggaatt
     4321 tggggagatg aaaaccgcta tatagaaagt tatttttcac aagccaaaaa agaaggaaag
     4381 ccagtttatt ttagcgggga tggggctttt tatgatgata atggctatat tactatcacg
     4441 ggaagaactg atgatgtggt aaatgttgca gggcaccgta taggaacagc tgaaattgaa
     4501 agcgctattg ctaaacatcc aagcgtagca gaatcagcag ttgtaagtgt gcttgatgcg
     4561 attaagggtg agtctttatt tgcttttgtg gttttaaatc caacttcaag ttgtgattta
     4621 ggaggggcta tagaaacctt aaaagaatta aatgatattt taagagcaga gattggacct
     4681 atagctaaga tcgaaaaaat tctttatact acaggcttgc ctaaaacaag aagtggtaag
     4741 atcatgagaa gaattttaag aaccatagca aggggcgagg aattaaaaca agatatttca
     4801 actcttgagg attcaggagt ggttcaaagt attatcgatg cagctaagat aggaattcaa
     4861 taaggcaaaa aattctttgc cttattttta aatacatgtt aaacttagtt ttgatttatt
     4921 taaaaattgt agtttttggt tataatacca aaaacaaata aaggataatt atgcttcaaa
     4981 cttgtatttt tcctgcagca ggatatggga ctaggtttct acccgcaacc aaagctttac
     5041 ctaaagagat gttgcctata cttaccaaac ctttgattca ttatggagta gatgaggctt
     5101 tagaagcagg tatggataat atgggttttg ttacaggtcg tggaaaaaga gctttggagg
     5161 attattttga tatttcttat gagcttgagc atcaaatttc gggtacaaat aaagagtatt
     5221 tgttaaaaga tatccgctct ttaattcatc gttgtacttt tacctttaca agacaaaatg
     5281 aaatgcgcgg gctcggcgat gcggtattaa agggtaggcc tttagcaggc gatgaggctt
     5341 ttggtgtgat tttggctgat gatttgtgta tcaatgaaga gggtgttaat gtgatggcac
     5401 aaatggttaa aatttatgaa aaatatcgtt gcaccatcat agctgttatg gaagttccaa
     5461 aagagcaagt atcaagttat ggagtgattg caggaaattt cgtagaagag gatttgatca
     5521 tggtaaattc aatgatagaa aaaccatctc ctcaagaagc tccaagcaat cttgctatca
     5581 taggaagata tattttaact cctgatattt ttggaatttt agaaaatact aaagcaggaa
     5641 aaaatggaga aattcaactc acagatgcac ttttaaccca agcgactaat ggtatggttt
     5701 tagcttacaa atttaaggga aaacgctttg attgcggaag tgtagagggc tttgtagagg
     5761 ctacaaatta tttttatgag aaaagtaaat gctaaataat actctttttt ttaaagaaag
     5821 tgaaattcgc actataagtt cttatgcaaa tcgtatcaat gatgaagtag aaagtgggga
     5881 tatagggtat tatcatctta tcgatacaag tttaacctta atagacgaaa gcttaaattt
     5941 cattcaagat aaagagcatg taaaaaatat cgttttagtg ggtatgggtg gttcaagttg
     6001 cggtgttaaa gctttgcgtg atatgctttt tgatgaaaaa agtaatcaaa gagaactttt
     6061 tatacttgat aataccagtt cgcactcctt tagcagggct ttagagaaaa tcaagcttga
     6121 agaaagtttg tttttaatca tcagtaaaac aggtagcact atagaagtag tatcgctttt
     6181 taagcttctt atagaacatt ttaaactcga tatgcaagaa ttaaaaaaat actttatttt
     6241 tatcacagat aaagattcta aactgcataa agagggtgag aatttaggca tcaaatgctt
     6301 ttttatccct gcaaatgtag gagggcgttt tagcatactt tcagctgtgg gtatagtgcc
     6361 actttgtttt tgtggttata atgctaaagc tcttttagaa ggagctaagg catgctttga
     6421 agattttttt atacataaaa aagatgaaat tttgcaaaaa gcttatcatt attgtactca
     6481 caaaagtgca aatatcaatg tacttttttc ttacagcgat gcttttaagg gttttaatga
     6541 atggtatatc cagcttattg ctgaaagttt gggtaaaaaa caaggctaca aacgcatagg
     6601 tttaactcct atcgctctta taggagcaag ggatcagcac agctttttac aactcattat
     6661 ggatgggcca aaaaacaaaa ctattacttt tttaaaaatc aaagatagtc aaaaggctcc
     6721 ggttataccc gatatccatt ttaaattttt agatgatttg agcaataaag tcaatttaca
     6781 cgatctttta aatgctcaat gtgacgcgac aatgcatgct ttaattgctg aaaatttaag
     6841 tgtcgatata atagagcttg aaaaattaga tgcatggcat acaggatatt tgatgtatta
     6901 ttatgagctt tttacttcgg cttgtggggt aatgctagga attaatactt atgatcagcc
     6961 tggggttgag gttgggaagt tgattttaaa aaatatttta aaatcatagt aaat
//
LOCUS       DBBXOW010000084         6803 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.085, whole genome shotgun sequence.
ACCESSION   DBBXOW010000084 DBBXOW010000000
VERSION     DBBXOW010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6803
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.085"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            31..1578
                     /locus_tag="ACJE1S_001692"
     CDS             31..1578
                     /locus_tag="ACJE1S_001692"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG0807218.1"
                     /translation="MFKFKLSWFGFVLFNSILITLLNFNLHSFVYEKLSQNLLLTLVF
                     IVAYFGLVHMIFSLIFVKYLTKILSIFFILSSCTSLYFITFYGVLIDSDMIQNVMQTD
                     IKEVKDLLSWRLVLLAIVVLLFCVFILRIRIENNTEQGFFKKIRVRVLSALLGCSIFL
                     IAFVPLSKTFIPFFRTYNEIRMYNVPFYPIYAVYRYCVRFVKVKPEFKTIANDAYREN
                     NHTKKLLVLVVGETARAANYSLGGYAKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPC
                     MFSLSKRQNYSSSEYQENVMDILQKTGVKASWIDNNSGGCKGVCDRLSDKQQLSSDWD
                     ENLLPFLKERLGNLDTQNIIVLHLQGSHGPAYYKRYPNEFKKFIPTCDTNELSKCDSE
                     ALINTYDNTLLYTDYLLSEIIKLLKEKKDYESSLIYLSDHGESLGENGIYLHGMPYAI
                     APSYQTHIPVIFWSNDKKLMMTAQNHKGLKLSQDNLFSTLLGYFDVKTMVYESDYDLL
                     NQTLKAN"
     gene            1578..1934
                     /locus_tag="ACJE1S_001693"
     CDS             1578..1934
                     /locus_tag="ACJE1S_001693"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HGG0807219.1"
                     /translation="MKPKYHLLNNARYALEGILALLKNEMAFRLELCVIIPAIVFSFF
                     LDVSFLEHLFLITVLILILITEALNSAIEACVDLITNEWHEKAKVAKDCASAAVFFSV
                     CLALFIWGFILGKLWL"
     gene            1925..2167
                     /locus_tag="ACJE1S_001694"
     CDS             1925..2167
                     /locus_tag="ACJE1S_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006276 - plasmid maintenance [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HGG0807220.1"
                     /translation="MAVKIENLMREILGKKRFELLQFLCENADENGFVMIKISELEAR
                     LNQSKPTIIATFKFLEEKKLFKKLKNGFYQLCIPCD"
     gene            2269..3273
                     /gene="pyrC"
                     /locus_tag="ACJE1S_001695"
     CDS             2269..3273
                     /gene="pyrC"
                     /locus_tag="ACJE1S_001695"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HGG0807221.1"
                     /translation="MTLKNPLDMHLHLRDKNMLSLVAPFSAKDFRAGVIMPNLVPPLC
                     DLESLKSYKTRIINACENENFTPLMTLFFKNYDEKFLKSAKDEIFGIKLYPAGITTNS
                     KGGVSSFDIENLKPTLEAMSDLQIPLLVHGETNDFVMDRESNFAKIYENLAKNFPRLK
                     IVMEHITTQTLCELLKDYENLYATITLHHLIITLDDVIGGKMQPHLFCKPIAKHYKDK
                     EALCELAFGGYEKVMFGSDSAPHPKHEKECCGCAAGVFSASVALCVLADLFSKNSNEA
                     NLQRFISDNACKMHNLTFEKEKIIVLENQEWQVPNEYKNENEKVVPFMAGESLKFRVK
                     "
     gene            complement(3314..3688)
                     /locus_tag="ACJE1S_001696"
     CDS             complement(3314..3688)
                     /locus_tag="ACJE1S_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HGG0807222.1"
                     /translation="MDINTVLMMISDKIPSNSLPLVQDKLKNASEDKINSLAILPFKS
                     HIIGLILGLFLGAFGIDRFYKGDIGLGIAKLITWLVGVVTIWIYIGGLILFVLWIWCI
                     VDWFLVWKGIKKDNLNKILAVL"
     gene            complement(3841..4551)
                     /locus_tag="ACJE1S_001697"
     CDS             complement(3841..4551)
                     /locus_tag="ACJE1S_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG0807223.1"
                     /translation="MNLWDKKAKSYARYNQKLNSIQEQSFKELEKLNINFKDKKIIDI
                     GCGTGVWTLHLAQNAKEITALDNAKAMLEILKEDANKLQLTNIKYENCTFTEWINKNQ
                     NAQFDIAFLSMSPALQDKKDYLNFMRLAKIRIYLGWADYRKSDFLDPIFKHFNTEFKG
                     IYKQDLESYLLENNVKFHKFIFDETRIVKRKKDEAIENALWHLNMNGVKASKQDLETF
                     VKGDIKETIQSKIKLLVF"
     gene            complement(4670..6787)
                     /locus_tag="ACJE1S_001698"
     CDS             complement(4670..6787)
                     /locus_tag="ACJE1S_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002921296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HGG0807224.1"
                     /translation="MFRLSSVSSKLLLSVAISVILATALMIAIVSFQVASYSEKEARN
                     TILLSSKRYVNYIQGMLNEEVTLTKGVATSLNEMFQNNDHIDIDLIESLIKNTFDSSH
                     YAAYTFLYLKDTTVLSDMQNVDKKYISPDGKTFSMIFFDQIVEKSGGITTISTPNNFS
                     QLNLIQNIEQNAKYGDKDSVFVDSPRKLNYDNNEFLGINFGMPIFNNKGKFIGVIGYT
                     IDLLEISETILDPKFDFFEGDLRFLMNDQGIIAIHKNKNAILKTLFDINKDQSAQLIV
                     EAVKNHKDEILDNYIASTGDLSYASISSFSTLGNSSHWSVIVTAPKKSVLAPLYKLQY
                     IIISVAIIALIAILAVVYFFIRKIIGSRIPLILKSLENFFRFLNHEKIEVQTIEIKAN
                     DELGKMGKIINENILATKRGLEQDNQAVKESVQTVSVVEGGNLTARITANPRNPQLIE
                     LKNVLNRLLDALQARVGSDMNEIQRVFNSYKSLDFTTEVKDANGAVEVTTNALGQEII
                     KMLKQSSDFANALANESGKLQTAVQNLTSSSNSQAASLEETAAALEEITSSMQNVSVK
                     TSDVITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAE
                     RTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINESVAQIDQTTKDNVEIANES
                     AIISSTVSDIANNILEDVKKKRF"
BASE COUNT         2279 a          998 c         1013 g         2513 t
ORIGIN      
        1 ttgcttttta gttattttta aggggagaat atgtttaaat ttaaactttc ttggtttgga
       61 tttgtacttt ttaattccat actcattaca cttttaaatt ttaatttaca ttcatttgtt
      121 tatgaaaaat tatcccaaaa tttactgctt actttagttt ttatcgtagc ttattttggt
      181 ttggttcata tgattttttc acttattttt gtaaaatatt taactaaaat attgtctata
      241 ttttttattt tatcatcctg taccagtctt tattttatca ctttttatgg agttttaatt
      301 gattcagata tgatacaaaa tgttatgcaa actgacataa aagaagtgaa agatttgcta
      361 agttggcgtt tggttttatt ggctattgtc gtcttgcttt tttgtgtttt tattttaaga
      421 attcgtattg aaaataatac agagcaaggt ttctttaaaa agatacgggt tagagtttta
      481 agtgctttgt tgggttgttc tatcttttta atcgcctttg tgcctttaag taaaaccttt
      541 ataccttttt ttagaactta caatgaaata agaatgtata atgttccttt ttatccaatt
      601 tatgccgtat atcgctattg tgttcgtttt gtaaaagtta agccagaatt taaaactata
      661 gctaatgatg cttatagaga aaacaatcac actaaaaaac ttttagtttt ggtagtgggt
      721 gaaaccgcta gagcggcaaa ttactctttg ggtggatatg ctaaaaatga taccaatttt
      781 tataccaaaa aagataatgt agtatttttt gataattttt cttcatgcgg cactgctaca
      841 gcggtgagtc tgccttgtat gttttctctt tcaaagcgtc aaaactattc aagtagtgaa
      901 tatcaagaaa atgttatgga tatcttgcaa aaaacaggcg taaaagcttc ttggatagac
      961 aataactcag gcggatgcaa gggagtttgc gatagattat ctgacaagca gcaactttct
     1021 agcgattggg atgagaattt attgccattt ttaaaagaaa gactaggaaa tttagatact
     1081 caaaatatca tagttcttca tttacaaggc tctcatggac cagcttatta taagcgttat
     1141 ccaaatgaat ttaaaaaatt tatcccaact tgtgatacta atgaactttc aaaatgtgat
     1201 agtgaagctt taatcaatac ttatgataat actttgcttt atacggatta tcttttaagt
     1261 gagattatca aacttttaaa agaaaaaaaa gattatgaga gttctttaat atacctttca
     1321 gatcatggag aaagtttggg tgaaaatgga atttatttac acggaatgcc ttatgctata
     1381 gcgccaagct atcaaactca tatccctgtc attttttgga gcaatgataa aaaactcatg
     1441 atgacagctc aaaatcataa aggcttaaaa ctttctcaag ataatctttt cagcacactt
     1501 ttgggttatt ttgatgttaa aaccatggtt tatgagtcag attatgattt attaaatcaa
     1561 accttaaagg ccaattaatg aaaccaaaat atcatctttt aaacaatgca cgatatgctc
     1621 tagaaggaat tctagccctg cttaaaaatg aaatggcttt tcggctagag ctttgtgtga
     1681 ttatccccgc tatcgttttt agcttttttt tagatgtaag ctttttggag catttgtttt
     1741 taatcactgt tttaattctc atcttaatca ctgaagcttt aaattcagct attgaagctt
     1801 gtgtggattt gattacaaat gaatggcatg aaaaagctaa agttgctaaa gattgtgcaa
     1861 gtgcggcagt attttttagt gtgtgtttag cactttttat ttggggattt atcttaggaa
     1921 aattatggct gtaaaaattg aaaatttaat gagagaaatt ttaggtaaaa aacgctttga
     1981 gctgcttcaa tttttatgtg aaaatgcgga tgaaaatggt tttgtgatga taaaaataag
     2041 cgagcttgaa gcaagattaa accaaagcaa acctaccatc atcgccactt ttaaattttt
     2101 agaagaaaaa aagcttttta aaaagttaaa aaatggattt tatcaacttt gcatcccttg
     2161 tgattagaaa ataaattttt attttaagta ttctttatct tagaaccact ttttattatt
     2221 atttttagct ttataggata aaatttgctg attgatttag gagaaaaaat gacacttaaa
     2281 aacccactag atatgcattt gcatttaaga gataaaaaca tgctaagctt ggttgcacct
     2341 tttagtgcta aagattttcg tgcgggtgtg attatgccaa atttagttcc accgctttgt
     2401 gatttagaga gtttaaaatc ttataaaacg cgtataataa atgcttgtga aaatgagaat
     2461 ttcactcctt taatgactct tttttttaaa aattatgatg aaaaatttct taaaagtgcc
     2521 aaggatgaaa tttttggtat caagctttat cctgcgggca tcaccacaaa ttcaaaaggt
     2581 ggggtttcaa gttttgatat agagaattta aaacccactt tagaagcgat gagtgatttg
     2641 caaattccac ttttggtaca tggagaaacc aatgattttg tgatggatag ggaaagcaat
     2701 tttgctaaaa tctatgaaaa tttagctaaa aattttccgc gtcttaagat tgttatggag
     2761 catattacga ctcaaacctt atgtgaactt ttgaaagatt atgaaaattt atatgcaacc
     2821 attactttac atcatttaat catcacttta gatgatgtta tcggtggaaa aatgcagccc
     2881 catctttttt gcaagcctat agcaaagcat tataaagata aagaagcgct ttgtgagctt
     2941 gcttttggtg gatatgaaaa agtgatgttt ggaagcgata gtgcaccaca tcctaagcat
     3001 gaaaaagaat gttgcggttg tgcagcgggt gtatttagtg cgagtgtagc actttgtgtt
     3061 ttggctgatc tttttagtaa aaattcaaat gaagctaatt tacaaagatt tatttcggat
     3121 aacgcttgca agatgcataa tttaaccttt gaaaaagaaa aaatcattgt tttagaaaat
     3181 caagaatggc aagttccaaa cgaatataaa aacgagaatg aaaaagtagt tccttttatg
     3241 gcgggggaaa gtttaaaatt tagagtaaaa taaaaactag ttttaaaact agtttttatc
     3301 taagttgcta tttttataat acagctaaga ttttattgag attgtctttt ttgatgcctt
     3361 tccatactaa aaaccaatcc acaatgcacc atatccataa aacgaataaa attaaaccac
     3421 cgatataaat ccaaatggta acaacaccta ctaaccaagt tataagttta gcaataccca
     3481 aacctatatc acccttataa aaacgatcaa ttccaaaggc acctaaaaac agacctaaga
     3541 tcaaacctat aatatgactt ttaaaaggta agatagcaag agagttgatt ttatcttcac
     3601 ttgcattttt aagcttatct tgcacaaggg gcaagctatt ggatggaatt ttgtctgaaa
     3661 tcatcatcaa tacagtattt atatccataa aatctcctat aataatatta gaacaaaata
     3721 ataactaaaa taatctaaaa ttacttttaa gtttaatttt ataaaatgag cattttgata
     3781 aaaatatttc agtattacaa gattatatat ctaccttaag atagaatttt atctcaagga
     3841 ttaaaaaacc aaaagtttga tttttgattg tatggtttct ttgatatcgc ctttcacaaa
     3901 agtttctaaa tcttgcttag aagctttaac tccattcata tttaaatgcc acaaggcatt
     3961 ttctatggct tcatcttttt ttctttttac tatgcgtgtt tcatcaaaga taaatttatg
     4021 aaatttcaca ttattttcta acaaataact ttccaaatct tgtttataaa tacccttaaa
     4081 ttctgtatta aaatgtttaa atataggatc taaaaaatca ctctttctat aatcggccca
     4141 gccaagataa attcgaattt tagccaatcg cataaagttt aaatagtctt ttttatcttg
     4201 caaagcaggg gacatactta aaaatgctat gtcaaattga gcgttttgat ttttatttat
     4261 ccattctgta aaagtgcaat tttcgtattt gatatttgtt agttggagct tgttagcatc
     4321 ttcttttaaa atttctaaca tagcttttgc attatcaaga gcagtgattt cttttgcatt
     4381 ttgtgctaag tgtaaagtcc atactcctgt gccacatcct atatctataa tctttttatc
     4441 tttaaagttt atatttagtt tttctaattc tttaaaactt tgctcttgta tggaatttag
     4501 tttttgattg tatcttgcgt agctcttagc ttttttatcc caaagattca ttgatagtcc
     4561 ttatttttaa atcaataaaa tcatagcata aaaaatacta aattattaaa ttatctattt
     4621 gtaaattcta ctaacaccta gttcaaacta ggtgttagtg aacaatcaat caaaaccttt
     4681 tctttttcac atcttcaagt atgttattag ctatatcact tactgtacta gaaataatag
     4741 cagactcatt agcaatctct acattatctt tagtagtttg atcaatttga gctacactct
     4801 cattgatttg agtaatacct gcagtttgct ctttaataga ttctgccata tcattgatag
     4861 attgaaccaa taaattagta ttagcttcta tttctgataa agacttttga gttctctcag
     4921 ctagctttct aacttcatca gcaacaacgg caaagcctct accatgttct cctgctcttg
     4981 cagcttcaat agctgcattt aatgctagaa gattgatttg atctgcaata tctccaataa
     5041 tacctgtaac attcttaatc tcttcagatt gagtgataac atcactggtt tttacagaaa
     5101 cattttgcat agaagaagta atctcttcta aagcagctgc ggtttcttct aaagaagctg
     5161 cttgagaatt agaagatgaa gtaaggtttt gaacagcagt ttgtaatttt ccactttcat
     5221 tagctaaagc attagcaaag tctgaacttt gttttagcat tttaatgatt tcttgtccta
     5281 gtgcattagt agttacctct acagctccat tggcatcttt tacttcagta gtaaagtcaa
     5341 gagatttata actattaaat actctttgga tttcattcat atcagaacct actctagcct
     5401 gtaaagcatc aagaagtcta tttagaacat ttttaagttc aatcagttgt gggtttcttg
     5461 gattagcagt aattcttgct gttaaattac caccttctac aactgatacg gtttgaactg
     5521 attctttaac ggcttgattg tcttgttcta agcctctttt agtagcaaga atgttttcat
     5581 tgataatttt acccattttg cccaattcat cattagcttt aatttcaatt gtctgaactt
     5641 ctattttttc atgatttaaa aagcgaaaga aattttccaa agacttaagt ataagaggaa
     5701 ttctagagcc tatgattttt cttataaaaa agtacacaac agccaaaata gcaattagtg
     5761 ctattatggc aacactaata ataatatatt gtagtttata taaaggggct aaaactgatt
     5821 ttttaggagc tgttacaatt acactccaat gactagaatt acctaaagtg ctaaatgaag
     5881 agatactagc ataactaaga tctcctgttg aggcaatata attatctaag atttcatctt
     5941 tatggttttt aactgcctca acaattaatt gagcagattg atctttgtta atatcaaata
     6001 aagtttttaa aattgcattt ttatttttat gaatagcaat aataccctga tcgttcatta
     6061 agaatcttag atccccttca aaaaagtcga attttggatc caatatagtc tcggaaattt
     6121 ctagtaaatc tatagtatat cctataactc caataaattt gcccttattg ttaaaaatag
     6181 gcataccgaa atttatacct aaaaattcat tattatcata attaagtttt ctaggagaat
     6241 ctacaaaaac agagtcttta tctccatatt ttgcattttg ttcgatattt tgtattagat
     6301 ttaattgaga gaaattgttt ggagttgaaa tagtagttat tccaccagat ttttctacta
     6361 tttgatcaaa aaatatcata gaaaaagttt ttccatctgg gctaatatat tttttatcta
     6421 cattctgcat atcacttaat acagtagtat cttttaaata gagaaatgta tatgctgcat
     6481 agtgactact atcaaaagta ttttttataa gactttcaat taaatcgata tctatatgat
     6541 cattattttg aaacatttca tttaacgatg tagcaactcc tttggttagt gtgacttctt
     6601 catttaacat accttgtata taattcacat atctttttga agataataaa atagtatttc
     6661 tggcttcttt ttctgaatat gaagcaactt gaaaagaaac aatagcaatc ataagagctg
     6721 tagctaaaat aacactaata gcaactgata ataagagttt tgaactaacg ctcgatagtc
     6781 taaacatgaa aaacctcaca taa
//
LOCUS       DBBXOW010000085         6572 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.086, whole genome shotgun sequence.
ACCESSION   DBBXOW010000085 DBBXOW010000000
VERSION     DBBXOW010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6572
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.086"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            24..473
                     /locus_tag="ACJE1S_001699"
     CDS             24..473
                     /locus_tag="ACJE1S_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HGG0807225.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFYSIHEYTEKAY
                     EEMAELFDNCAERALQLGEKAITCQKTLMENAKSPKVEKDCFTPVEVMELIKKDYEYL
                     LAEFKKLNEEAEKASDTTTAAFAQENIAKYEKSLWMLASVLQNTCKM"
     gene            697..1281
                     /locus_tag="ACJE1S_001700"
     CDS             697..1281
                     /locus_tag="ACJE1S_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mbeg1-like protein"
                     /protein_id="HGG0807226.1"
                     /translation="MFKVLTHNIFQKECVIIGKFEPLMAFYFIKRFDLLAHINEDYLD
                     SRGGFRASLFQNKENKEFILAIAGSDLRPLKFDIGDLISDFILLNGKIPKKQFDSLLK
                     FYTLIKKEFCFGKITLVGHSLGGHLAQLFVLDFALEVQNIYTFQAPGIAKKILKDIKN
                     EAYIQKISYHFHTCGDFKKMHGINLILFKICILK"
     gene            1395..2432
                     /locus_tag="ACJE1S_001701"
     CDS             1395..2432
                     /locus_tag="ACJE1S_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG0807227.1"
                     /translation="MKVLNFFYENHPKFEISYERKVQIPLCNIIIKGPKFSGKKTLIF
                     NYLSQFKPNEILFLNLYDTRFENQSLGHLSNFLEKNVQIKFLCIYNVEFALNLQDIKI
                     PIIISTDKKDLHIEGFQELELDYFDFEEFVSISRKNLPINNLVGLFLQSGRSKLGEKN
                     ILLRQNFNTLELEILKYLALNLGQQISISKLFLELKKKLKTSKDSVYHTIKELENTYI
                     IHPISHDEKKLQKIYFRDFGLRNNLCIQKDFAHLFENLILNELFKFKQEFFYNKFFTF
                     YSKVSKIAYISSPTLDIDLIKLRAKKILSKSLELGIFHVVFITLSSEDSFFEQGVKFE
                     VLPFDKFSLGF"
     gene            complement(2439..3170)
                     /locus_tag="ACJE1S_001702"
     CDS             complement(2439..3170)
                     /locus_tag="ACJE1S_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HGG0807228.1"
                     /translation="MKRIIIFLSFYLLPLFGNSELKNGFGEEYYKLNVEQKRQIFFTK
                     MNAMFDKSFEEIAKERAFVEAFFYDAYKNGLRNSNQNNLEKLINLKNKYRVENLYDFT
                     EYKKRIQKIPKSMGIAQALVESAMGTSRFAREANNLFGEWTWGEKGLIPDLRYPDKKH
                     KIRIFDSLQDSVDSYVLNLNRHFAYEEFRNERAKFESEGKEITGLEAIKTLDSYSERK
                     GYYINIVTKIIQRYDLERYDTPKSF"
     gene            complement(3145..3894)
                     /gene="dapF"
                     /locus_tag="ACJE1S_001703"
     CDS             complement(3145..3894)
                     /gene="dapF"
                     /locus_tag="ACJE1S_001703"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HGG0807229.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINGIKPHMAFLTGAGVIKAN
                     VDNNSVEVSLGKIKNIQDAFSECEKNWQLCDTGVPHLVHFCENLDEFDLKLCKQMREK
                     YNANVNFVKVENDNTLRVRTFERGVEDETQACGTGMGACFYLAFLNKKIHNQARVIPK
                     SGEELSFKFENEELFFKGKVRYCFEANYNFS"
     gene            complement(3891..4496)
                     /gene="coaE"
                     /locus_tag="ACJE1S_001704"
     CDS             complement(3891..4496)
                     /gene="coaE"
                     /locus_tag="ACJE1S_001704"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HGG0807230.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENA
                     LELEKIFSPFSLKNLLTKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKI"
     gene            4557..5546
                     /gene="purM"
                     /locus_tag="ACJE1S_001705"
     CDS             4557..5546
                     /gene="purM"
                     /locus_tag="ACJE1S_001705"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HGG0807231.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKNPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKSVVAGIAEGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFEGLKLKFDDKIEGKNLIDVL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSRVLENSDAFIIGEICINEGIVLE"
     gene            5605..>6572
                     /locus_tag="ACJE1S_001706"
     CDS             5605..>6572
                     /locus_tag="ACJE1S_001706"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HGG0807232.1"
                     /translation="MKNIVFHSDGFGDLLVCFKALYAIKQLYPEYKLFLLTNGLMESD
                     FLEKIPFIDEVLIYKDDFLEKIQSKNPVIFITTRRQGLYFKKLKFLNVQKCIVFPHLI
                     SIISKNLTTPLPFFRAKKHMSEIVLKLVRMINTRHFDKNFNQIDFSKIKNLLPYDARL
                     SDNFFKQIDTKYEKIIGINAFSNNSEYRGFNFFIKDWIGLARQLSLKYPKFLFILLNF
                     STNSIQYNIDQNANLKVFCNNKNIASLVSISQKLDFLITVDTGNLHLCDILQIPTLAF
                     TSSLAAYRFGGGSYGGRFDKLIVKPAWQKEYRKIYEIFTKKAENNL"
BASE COUNT         2257 a          916 c         1005 g         2394 t
ORIGIN      
        1 aaaaattaaa aaaaggagtt aacatgtcag taacaaaaca attattacaa atgcaagcag
       61 atgctcatca tttatgggtt aaatttcaca attatcattg gaatgttaag ggtttacagt
      121 tttattcaat ccacgaatat acagaaaaag cttatgaaga aatggcagag ctttttgata
      181 attgcgcaga aagagctttg caacttggtg aaaaagctat cacttgccaa aaaactttaa
      241 tggaaaatgc aaaaagtcca aaagtagaaa aagattgttt cactccagtt gaagtgatgg
      301 agttgatcaa aaaagattac gaatatcttt tggcagaatt taaaaaatta aacgaagaag
      361 ctgaaaaagc tagcgatact actacagctg cttttgctca agaaaatata gcaaaatacg
      421 aaaaaagcct ttggatgctt gcttcagttt tacaaaatac ttgcaaaatg taatttcaag
      481 gggctttttg cccctttatg atttaaatca atttttagaa ctttctcata aaaaaactta
      541 aattctcaag agtcaaattt aaagaaaaat ttatattttg attttaagca aaataaaaat
      601 actctaatac atttatatca ttacacctta ctttctcgtg ctgcttatct taatttaaat
      661 acaacagata tttttttaaa tatagataga aaaacattgt ttaaggtttt aactcataat
      721 atttttcaaa aagaatgcgt tataatagga aaatttgagc ctttgatggc attttatttt
      781 attaagcgat ttgatttact tgctcatatt aatgaagatt atcttgattc aaggggtggg
      841 tttagagcaa gtttatttca aaataaggaa aataaagaat ttattttagc tatcgcagga
      901 agtgatttaa gacctttaaa atttgatatt ggagatttga ttagtgattt tatacttcta
      961 aatggaaaaa ttcctaaaaa acaatttgat tctttgttaa aattttatac actaataaaa
     1021 aaagaatttt gctttggtaa aattacttta gtaggacatt ctttaggtgg gcatttagca
     1081 caactttttg ttttagattt tgccttagaa gttcaaaata tttacacttt tcaagcccca
     1141 ggtattgcta aaaaaatact aaaggacatc aaaaatgaag cttatattca aaaaatttct
     1201 tatcattttc atacttgtgg tgattttaaa aaaatgcatg gtataaattt aattttgttc
     1261 aaaatttgca ttctaaaata ggatatccaa tttggctaaa tataggaaat aaattccatc
     1321 atcctaagat ttgtcccaag atattgcata aggttttaaa tatgttataa ttttcctttt
     1381 taaaaggata atatttgaaa gtattaaatt ttttttacga aaatcatccc aaatttgaaa
     1441 taagctatga aagaaaggta caaattcctc tttgtaatat catcatcaaa gggccaaaat
     1501 ttagcggtaa aaaaaccttg atttttaact atttatccca atttaagccc aatgaaattt
     1561 tatttttaaa tttgtatgat actcgttttg aaaaccaaag cttagggcat ctttcaaatt
     1621 ttttagaaaa aaatgtccaa ataaaattcc tttgcatata taatgtcgaa tttgccttaa
     1681 atttgcaaga tattaaaatt cctatcatca taagtacaga taaaaaagat ttgcatatcg
     1741 aaggatttca agagcttgag cttgattatt ttgactttga agaatttgta agtatcagta
     1801 gaaaaaactt accgataaac aatctagtgg gacttttttt acaaagtggg cgtagtaaat
     1861 taggtgaaaa aaatatactt ttaagacaaa attttaacac tctagaactt gaaattttaa
     1921 aatacttagc tttaaattta ggacagcaga tcagtatttc caagcttttt ttagagctta
     1981 aaaaaaagct aaaaacatct aaagatagcg tttatcacac cataaaagag cttgaaaata
     2041 cctatatcat ccatcctata agccacgatg aaaaaaagct tcaaaaaatt tattttaggg
     2101 attttggctt aagaaacaat ctatgcatac aaaaagattt tgctcatttg tttgaaaatc
     2161 ttattttaaa tgagcttttt aaatttaaac aagaattttt ttacaataaa ttttttacat
     2221 tttatagtaa ggtttcaaaa atcgcatata tttccagtcc gacgctagat atagacttga
     2281 tcaaattgcg cgctaagaaa atcctttcta agagtttgga gcttgggatt tttcatgtgg
     2341 ttttcatcac tctttcgagc gaagatagct tttttgagca aggggtgaaa tttgaagttt
     2401 tgccttttga taaattttca cttggctttt agctaagact agaaagattt tggagtatcg
     2461 tatcgctcaa gatcgtatcg ttggatgatt ttagtaacga tattgatata ataacccttg
     2521 cgctcggagt aagaatctaa agttttaata gcctctagtc ctgttatttc tttgccttca
     2581 ctttcaaatt tagctctttc gttgcgaaat tcctcataag caaagtgccg atttaaattc
     2641 agcacataag aatccacact atcttgcaag ctatcaaaaa ttctaatttt atgtttttta
     2701 tcaggatatc ttagatcagg gattaagccc ttttctcccc aggtccattc tccaaaaaga
     2761 ttatttgcct ctcttgcaaa acggcttgtt cccatagcac tttcgaccaa agcttgggct
     2821 atacccatgg atttcggaat tttttgaatg cgttttttat attctgtaaa atcataaaga
     2881 ttttcaacgc ggtatttgtt tttaagattg attaattttt ctagattgtt ttggtttgaa
     2941 tttctaagtc catttttata cgcatcgtaa aaaaaagctt ctacaaaagc cctttctttg
     3001 gctatttctt caaagctttt atcaaacatt gcattcattt tggtgaaaaa tatttgtctt
     3061 ttttgctcta cattgagttt ataatactcc tctccaaagc catttttaag ctcgctattg
     3121 ccaaaaagag ggagtaaata aaaactaaga aaaattataa ttcgcttcaa agcaatatct
     3181 cacttttccc ttaaaaaata attcttcatt ttcgaattta aaacttagct cttcaccgct
     3241 ttttggaatc actctagctt gattgtgaat ttttttattt aagaatgcaa gataaaaaca
     3301 agctcccatg cccgtgccac atgcttgcgt ttcatcttct acgcctcttt caaaagtgcg
     3361 aactcttaaa gtattgtcgt tttcaacttt tacaaaattt acattggcat tatatttttc
     3421 tctcatttgt ttgcaaagct taagatcaaa ctcatccaaa ttttcacaaa aatgcaccaa
     3481 atgtggaact cccgtatcgc aaagttgcca gtttttttca cactcactaa aggcatcttg
     3541 tatgtttttt atcttcccta aagaaacttc tacgctatta ttatcaacat ttgcttttat
     3601 aactcctgct ccggtaagaa aagccatatg gggtttgata ccatttatat ggtgtgcaaa
     3661 atgtgccgca gcccttgagc cattgccaca catagcagcc cttgagccat cgttattata
     3721 aaattcccat tcaaagtcgt atttttcatg aggtaatatc acgataaagc catccgcacc
     3781 tataccctca taacgattac aaagttcttt agctaaagca cttctatctt cttttctatc
     3841 agcatttgtt atgacaaaat cattcccact tgcacaatat ttataaaatt tcatattttt
     3901 cctttagaaa tttcttgtat tactttaaca cattcttgcc taaaatcggc ataagagtta
     3961 gtatttttaa tgataaaatc tgctttttta agtttttctt caatatctat ttgagaatca
     4021 agtctcgctt ttgcagcttc taagctaagc ttatctcttt gcataattct tttaaggctt
     4081 aattctttag gtgtgtaaat tactatgact ttgcctaaat tttcataagc accgctttca
     4141 aaaaaaagag gaatttctac aaaaaaagct ttattttctt tatctagaat ttgcatttgt
     4201 tctaaaattt tagctcgaat tttaggatga gtgaaatttt ctaagatttt tttagcttct
     4261 ttattgttaa aaacaatttc tccaaggatt tttctatcga ttttcttttc ttttgtgagt
     4321 aaatttttta agctaaaggg agaaaaaatc ttttcaagtt ctaaagcatt ttcatctaaa
     4381 attttatgag cgattttatc tgcgctaatg cttttaaagc ctaaagaatt cgctatttct
     4441 ataaaagtgc ttttaccaca agcaattgaa gcggttacaa aaaaagcatt tttcatctta
     4501 tgccttatta aaactttttt cgttaaaata cctttttagt tcttaaagga aaataaatga
     4561 aaatttcata tgaagatgca ggcgtaagta tagataatgg aaatgccttt gtagaggcta
     4621 taaaaccttt ggttaaagaa acttttaatg ataatgttgt aggtggaatt ggttcttttg
     4681 ctggtgcttt tagaatgcca agtggcttta aaaatcctgt aattttgggg gctacagatg
     4741 gtgttgggac taaacttcgt ttggctattg atgcaaaaaa atacgacacc atagggcaag
     4801 atttagtagc aatgtgtgtg aatgatttga tttgtaattt tgctactcct ttgtttttct
     4861 tggattatta cgctacagcc aagcttgaag tagaggttgc aaagtcagtt gtggcaggca
     4921 ttgccgaggg gtgtaaaatg gcaaattgtg ctttaatagg cggagaaact gctgaaatgc
     4981 ctggaatgta tgcaaaagat gattttgatc ttgcgggttt tgcagtgggc atggctgaag
     5041 aagatgagat cgatagaagt aaatttgtta aaaatggcga tattttgctt gctcttccta
     5101 gttcaggact tcattcaaat ggctattctt tagcaagaaa agtacttttt gaaggtttaa
     5161 aactgaaatt tgatgataaa atagagggta aaaatttaat cgatgtttta ttagagccta
     5221 caagaattta tgtacgcgat tttcttactt taaagcctta tatcagtgct ctagctcata
     5281 ttacaggggg tggtttagta gaaaatttac cacgcgtttt acctcgtggt atgggtgcaa
     5341 ctatacgcaa acatcatctt aaaactcctg aaatttttta tactatagga caggctgtag
     5401 aagaaagcga aatgtataga agctttaata tgggagtggg tttagtaatg gttgtagatc
     5461 cttctaatgt aagtagggtt ttagaaaatt cagatgcctt tattatcggc gaaatttgca
     5521 ttaatgaagg tattgtttta gagtaaaaag aatttttttt aagatatttt aagagtaaat
     5581 taaaaaaaat aataaggaaa agtgatgaaa aatattgtct ttcattcgga tggttttgga
     5641 gatttattag tttgttttaa agctttgtat gctataaagc aactctatcc agagtataaa
     5701 ttatttttat taacaaatgg attaatggaa agtgattttt tagaaaaaat tccatttatt
     5761 gatgaagttt tgatttataa ggatgatttt ttagaaaaaa ttcaaagcaa aaatccagta
     5821 atttttatta ccacacgaag acaaggttta tattttaaaa aattaaaatt tttaaatgtt
     5881 caaaaatgta tagtattccc tcatcttatt agtataattt ctaaaaattt aaccacacct
     5941 ttaccatttt ttagagctaa aaaacatatg agtgaaattg ttttaaaatt ggttaggatg
     6001 attaatacta ggcattttga taaaaatttt aatcaaattg atttttctaa aattaaaaat
     6061 ttattacctt atgatgcaag attaagtgat aattttttta aacaaattga tacaaaatat
     6121 gaaaaaatta taggtattaa tgctttttca aataatagcg aatatagagg atttaatttt
     6181 tttataaaag attggatagg gcttgcaagg caactttctt taaaatatcc taaattttta
     6241 tttatacttt taaattttag tacgaattct attcagtata atattgatca gaatgcaaat
     6301 ttgaaagttt tctgtaataa taaaaatatt gcttctttgg taagtatttc tcaaaagcta
     6361 gattttttaa ttactgttga tactggaaat ttacatcttt gtgatatttt acaaattcct
     6421 actttggctt ttacaagtag tcttgcagct tatagatttg gaggtggaag ttatggaggt
     6481 agatttgata aattgatagt aaaaccagct tggcaaaaag aatatagaaa aatttatgaa
     6541 atttttacta aaaaagcaga aaataattta ga
//
LOCUS       DBBXOW010000086         6323 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.087, whole genome shotgun sequence.
ACCESSION   DBBXOW010000086 DBBXOW010000000
VERSION     DBBXOW010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.087"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..675
                     /locus_tag="ACJE1S_001707"
     CDS             <1..675
                     /locus_tag="ACJE1S_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,3-sialyltransferase"
                     /protein_id="HGG0807233.1"
                     /translation="VKTKNQAIQNKDNQIATINNEKQKLIDEKLNLQIQINQLQNTLN
                     TLPIKKQQLEISNLEQDLINKKLNAKETNQNILIKELEIKKLEQELNINQAFSYIPKE
                     QSAKQRIQNQLSYKLGQAMIINSKSILGYIRMPFVLSYIKDKHKQEQKIYQEKIKKDP
                     SLKLPPLESYPDYKEALKEKECLTYKLGEALIRANNNWYGGGYIKLLLEIRKLKREFR
                     KKANHA"
     gene            668..1411
                     /gene="cysQ"
                     /locus_tag="ACJE1S_001708"
     CDS             668..1411
                     /gene="cysQ"
                     /locus_tag="ACJE1S_001708"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HGG0807234.1"
                     /translation="MLSQITLKDINDIAIKAGKSVLKIYNQDFKISYKDDNSPLSEAD
                     LISNEIICKELAKFSLPILSEENKTLPYEQRKDWEYFWCVDPIDGTKEFINKNGEFTI
                     NIALVYKDTPVLGVVYAPALELLYSAKKGEGAFKNGVKLPLQRNDNFLKIVASKSHLN
                     EQTKDFIDSIQATKQKEFVSMGSSLKLCLVASNEADIYPRLAPTMEWDTAAADAIVRE
                     VGKMTYDFDTQKPLVYNKENLLNPYFIVK"
     gene            1416..2309
                     /gene="cysD"
                     /locus_tag="ACJE1S_001709"
     CDS             1416..2309
                     /gene="cysD"
                     /locus_tag="ACJE1S_001709"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HGG0807235.1"
                     /translation="MTHLDFLESESIHIIREVVAEFEKPAMLYSVGKDSSVMLHLLQK
                     AFYPAVPPLPLVHVDTTWKFKEMIEFRDKRAKELGMELIVYQNPKIKELNLSPFTHGS
                     SMHTDIAKTQGLKQMLDLYQFDAVFGGARRDEEKSRAKERIYSFRDENHSWDPKNQRP
                     ELWNIYNGRHKKGESIRVFPLSNWTELDIWQYIYKENIPIPSLYFAKKRPVIEYMGAK
                     ILVDDERMPKELAKNAKEELVRFRTLGCYPLTGAINSNASNVLEIIEELLLSKTSERQ
                     GRLIDTDEEASMEKKKKEGYF"
     gene            2309..3733
                     /gene="cysN"
                     /locus_tag="ACJE1S_001710"
     CDS             2309..3733
                     /gene="cysN"
                     /locus_tag="ACJE1S_001710"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HGG0807236.1"
                     /translation="MQTNIEKYLQEHENKELCRFITCGSVDDGKSTLIGRMLYDSKML
                     FEDQILSLEKDSKKLGNAGEKLDFALLVDGLASEREQGITIDVAYRFFTSEKRKFIIA
                     DTPGHEQYTRNMATGASTADIAIILIDARKGVLTQTKRHSYIVSLLGIKQFIIAINKM
                     DLVDFRQDIFDDICKSYKEILPYLKNYENIQTHFVPISALDGDNIASKSIHTPWYNGK
                     TLSELLDTLPIAADFNDEFIMSVQYVNRPHLNFRGFCGSIASGKVSVGDEIMILPSLK
                     TSKIKEIITPDIKNLKVLDKNENIQSAKNASFPSAITLTLEDEIDISRGDVIVSKNHS
                     LKISNSFKAMMIWMSEAKFSLNGNYLIKIANLTTSITFERIDFKKDINTFEESQSDEL
                     KLNDIAKCTLRLSKKTALAAYKDNKTLGSFIIIDRYSNETLAAGMVEEILTHEDKARV
                     YTQAEIELNAYIRKNYPEWECKKI"
     gene            3730..5445
                     /locus_tag="ACJE1S_001711"
     CDS             3730..5445
                     /locus_tag="ACJE1S_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG0807237.1"
                     /translation="MKIIVALSILGLLVLLISNKIKPFILFGSVAVLYYLLGYLNLNT
                     WLSSYTSESLIVLILLLLVSLAIEKSVVIAWCSKFIIGKNYHLSLLKLGVITASISAF
                     LNNTAVVASFMSLIKNNKFQAPSKLLIPLSYFSIVGGTMTLIGTSTNLIVNSFVVQNG
                     LESLKIFDFFAVGFCISVSVLIVLLIFSFLLPNYKEKDNEVNEYLINAKVLKNSSLIG
                     KTIQENGLRNLEFLFLFEIQRQDEIISPVSHDEIIKEGDVLIFSGDITHLETLKKFDG
                     LQMGAQEIKLETLNLVDVVINSESSLIGKSVKEANFRAKFDAGIVALKRGSQNISKIG
                     QSILQAGDRLILSVGKDFHSRDNINKNFYIISNIIQNQKLSNTQSFIVVFAFLTIIAL
                     SALEIVSLLKALLVFLAFLFVFKFISFDEIKRRFPLEIFIIVGSSLAITKVLVDSGLA
                     KDFADLIIGTFGAYGLYGSFVGIYLLTLLLTEIITNNAAAALAFPIAYSTALALEVNP
                     VPFILAVAYGASCGFMMPHGYQTHLMVGSICGYKTTDFVKIGWIVSLTYSAMVLIMTP
                     IFFKF"
     gene            5455..6036
                     /gene="cysC"
                     /locus_tag="ACJE1S_001712"
     CDS             5455..6036
                     /gene="cysC"
                     /locus_tag="ACJE1S_001712"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HGG0807238.1"
                     /translation="MDNNLTWHTSSITKTQRSKLKNQKPCVLWFTGLSGSGKSTLANA
                     VEKKLFEQGFHTYLLDGDNVRHGLNGDLGFDEASRVENIRRIGELCKLFMDAGMIVLC
                     AFISPFEKDRKLVKDLLEEDEYIEIFVDTSLEVCEKRDPKGLYKKARQGEIKNFTGID
                     SPYERPKNPHIHITKEDLNENVDMILGFLNKKI"
     gene            6037..>6323
                     /locus_tag="ACJE1S_001713"
     CDS             6037..>6323
                     /locus_tag="ACJE1S_001713"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807239.1"
                     /translation="MTAYVHIGTMKTGTSSIQNFLYLNRSLLQKQNYYYPISIKNIGR
                     LNDHNPFAHKFNTLLNKTDDLKIFSREFKNLNNEIKMCNCDKIIISMENVQ"
BASE COUNT         2318 a          874 c         1138 g         1993 t
ORIGIN      
        1 gttaaaacca aaaaccaagc tattcaaaat aaggacaatc aaatcgcaac tataaacaat
       61 gaaaaacaaa aattaattga tgaaaaatta aatttgcaaa tccaaataaa tcaacttcaa
      121 aacactctaa atactctacc tataaaaaaa cagcaactcg aaatttccaa tctagaacaa
      181 gacttaatta ataaaaaatt aaatgctaaa gagactaatc agaatatttt gattaaagaa
      241 ttagaaatta aaaaactaga acaagaatta aatatcaacc aggctttttc atatatacca
      301 aaagaacaga gcgctaaaca aagaatacaa aaccaacttt cctataagtt aggacaagct
      361 atgataataa attcaaaatc tatactaggt tatataagaa tgccttttgt attatcttat
      421 ataaaagata aacacaaaca agaacaaaaa atctatcaag aaaaaatcaa aaaagatcct
      481 tctttaaaac tgcctccttt agaatcatat cctgattata aagaagctct aaaagaaaaa
      541 gagtgtttaa cctataaact aggtgaagct ttgataagag caaataataa ttggtatggg
      601 ggggggtata tcaaattatt gcttgagatt aggaagctaa aaagagaatt tagaaaaaag
      661 gctaaccatg cttagtcaaa ttaccttaaa agatataaac gatatagcca taaaagcagg
      721 taagagtgtc ttaaaaattt acaatcaaga ttttaaaatt tcttataaag atgataattc
      781 gcctttaagt gaagcagatt tgatctcaaa tgaaattatt tgcaaagagc ttgctaaatt
      841 tagcctccct atactttcag aagaaaataa aacactacct tatgagcaaa gaaaagattg
      901 ggaatatttt tggtgtgtag atcctataga cggcaccaaa gaatttatca acaaaaatgg
      961 agaatttacc ataaacattg ctttagttta taaagatact ccagtattgg gcgtagtgta
     1021 cgctccagcc cttgagcttt tatacagtgc taaaaaaggt gaaggtgctt ttaaaaatgg
     1081 tgtaaaatta cccttgcaaa gaaatgataa ctttttaaaa atagtcgcta gcaaatccca
     1141 tctaaacgaa caaacaaaag attttatcga tagtatccaa gcgaccaagc aaaaagaatt
     1201 tgtttccatg ggcagctctt taaagctttg tctagtagct agcaatgaag cagatattta
     1261 cccaaggcta gctcctacca tggagtggga tacagcagcc gctgatgcta tagttaggga
     1321 agtgggtaaa atgacttatg attttgacac ccaaaaacct ttagtgtata ataaagaaaa
     1381 tttattaaat ccatatttta tagtaaagta gaaaaatgac ccatttagac tttttagaat
     1441 cagagtccat ccatatcatc cgtgaagttg tagctgagtt tgaaaaacca gctatgcttt
     1501 atagcgtagg taaagatagt tcagtgatgc ttcatctttt acaaaaagca ttttatcccg
     1561 ctgtgccacc acttcctttg gtgcatgtag acactacatg gaaatttaaa gaaatgatag
     1621 aatttagaga taaaagagcc aaagagcttg gtatggagct tatagtctat caaaacccta
     1681 aaatcaaaga attaaacctt tctccattta cacatggctc ttctatgcat acagatattg
     1741 ctaaaacaca aggtttaaaa caaatgcttg atttatatca gtttgatgca gtatttggtg
     1801 gtgcaagaag agatgaggaa aaatcacgtg caaaagaaag aatttactcc tttcgagatg
     1861 aaaatcactc gtgggatcct aaaaatcaac gcccagaatt gtggaatatt tacaatggcc
     1921 gccacaaaaa aggcgagtct ataagggttt ttccgctgag caattggact gagcttgata
     1981 tatggcagta tatttataaa gaaaatattc ctataccaag tctttatttt gctaaaaagc
     2041 gcccagtgat agaatatatg ggggctaaaa ttttagtcga tgatgagagg atgccaaaag
     2101 agcttgctaa aaatgctaaa gaagaattgg ttcgttttag gactttagga tgttatcctt
     2161 taaccggagc tataaattcc aatgctagca atgtcttgga aatcatcgaa gaacttttac
     2221 tttctaagac aagtgaaaga caaggcagac ttatagatac tgatgaagaa gcaagtatgg
     2281 aaaaaaagaa aaaagagggg tatttttaat gcaaacaaat atagaaaaat atctccaaga
     2341 gcatgaaaat aaagagcttt gtagatttat cacttgtggc agtgtagatg atggtaaatc
     2401 cacgcttata ggtagaatgc tttatgattc aaaaatgctt tttgaagatc aaattttatc
     2461 tttagaaaaa gacagtaaaa aacttggcaa tgcaggagaa aagcttgatt ttgcactttt
     2521 agtagatggg cttgcaagtg agcgtgagca aggcattact atagatgtgg cttatcgttt
     2581 ttttacaagt gaaaaaagaa aatttatcat agcagatact ccaggccatg agcagtacac
     2641 tagaaacatg gccacaggag caagtacagc tgatattgcc atcatactta tagatgctag
     2701 aaaaggggtt ttaactcaaa ctaaaaggca ttcttatata gtaagtttgc tcggtataaa
     2761 gcaatttatc attgctatta acaaaatgga tttggtggat tttagacaag atatttttga
     2821 tgatatttgc aaaagttata aagaaatttt gccttatttg aaaaactatg aaaatataca
     2881 aactcatttt gtgccaatat ctgccttaga tggggacaat attgcttcta aaagtatcca
     2941 tactccttgg tataatggaa aaactttatc cgagctttta gataccttgc ctatagctgc
     3001 tgattttaat gacgaattta tcatgagtgt gcaatatgtc aatcgcccac atttaaattt
     3061 taggggattt tgtggaagta tcgcgagtgg taaggtaagt gttggtgatg aaattatgat
     3121 tttgccttca ttaaaaacaa gtaagataaa agaaatcatc acgcccgata taaaaaattt
     3181 aaaagtttta gataaaaatg aaaatatcca aagtgctaaa aacgcaagtt ttccaagtgc
     3241 cataaccttg actttagaag atgagataga tatctcaagg ggtgatgtta tagtttctaa
     3301 aaatcatagt ttaaaaattt caaattcttt taaagctatg atgatatgga tgagtgaagc
     3361 gaagtttagt ttaaatggaa actatcttat aaagatagct aatttaacca ctagtataac
     3421 atttgaaagg attgacttta aaaaagatat caacaccttt gaagagtctc aaagtgatga
     3481 attaaagctt aatgatatag ccaaatgcac cctaagactt agcaaaaaga cagctttagc
     3541 agcttataag gacaataaaa ccttaggaag ttttattatc atagatagat attccaacga
     3601 aactctagcc gctggtatgg tagaagaaat tttaacccat gaagataaag caagggtcta
     3661 tactcaagct gaaatagagc ttaatgctta tataagaaaa aactaccccg aatgggagtg
     3721 taaaaagata tgaaaatcat tgttgcatta agcatattgg gcttacttgt tttgctcatt
     3781 agcaataaaa tcaagccttt tattttattt ggtagtgttg ctgtgcttta ttatcttttg
     3841 gggtatttaa atttaaacac ctggcttagc tcttatacga gcgaatcttt gatagtgctt
     3901 atattgcttt tattggtttc gctagcgata gaaaaaagtg tggttattgc ttggtgttct
     3961 aaatttatca taggcaaaaa ctatcattta tcacttttaa aacttggtgt tattacagct
     4021 agcatttcag catttttaaa caataccgca gtagtagcaa gctttatgag ccttataaaa
     4081 aacaataaat ttcaagctcc ttctaagcta cttatcccgc tttcatattt ttctatagtc
     4141 ggtggcacga tgactcttat aggtacttca actaacttga tagtgaattc ttttgtggtg
     4201 caaaatggtt tagagagttt aaaaattttc gatttttttg cagtgggttt ttgtataagc
     4261 gtgagcgtgc ttatagtgct tttgattttt agctttttat tgcctaacta taaagaaaaa
     4321 gataatgaag tcaatgagta tttaatcaat gccaaggtat taaaaaatag ctctttgata
     4381 ggaaaaacca tacaagaaaa tggtctgaga aatttggagt ttttgttttt gtttgaaatt
     4441 caaagacaag atgagatcat ttctccagta agtcatgatg agatcataaa agaaggtgat
     4501 gtgttgattt ttagtggaga tataacccat ctagaaactt taaaaaaatt tgatggctta
     4561 caaatgggtg ctcaagagat caagcttgaa acattaaatt tagtagatgt agtgataaat
     4621 tctgagtcaa gtttgatagg taaaagcgta aaagaggcta attttagggc taaatttgat
     4681 gcggggattg tagctttaaa aagaggctct caaaatattt ccaagatagg tcaaagcata
     4741 ttgcaagctg gagatagact tatcttaagc gtgggtaaag attttcactc aagagataat
     4801 attaacaaaa acttttatat catttcaaat atcattcaaa atcaaaaact aagcaacacc
     4861 caaagtttta tagtggtttt tgcatttttg actatcattg ctttatcggc tttagaaatt
     4921 gtatctttac ttaaggcatt attagtattt ttagcttttt tgtttgtgtt taaatttata
     4981 agttttgatg agataaaaag acgctttcct ttggaaatct ttatcatagt gggatcttct
     5041 ttggctatta caaaggtttt ggtcgatagt ggattggcta aggattttgc tgatttgatc
     5101 ataggaactt ttggagcata tggactttat ggaagttttg tggggattta tcttttaacc
     5161 ttgcttttaa ctgagatcat taccaacaac gctgcagcag ctctagcttt tcctatcgct
     5221 tatagcacag ctttagcgct tgaagtaaat ccggttccat ttatcttagc agttgcttat
     5281 ggggcaagtt gtggttttat gatgcctcat ggttaccaaa ctcatctcat ggtaggatcg
     5341 atttgcggat ataaaactac tgattttgta aagattggct ggatagtttc tttgacatat
     5401 tcggctatgg ttttgatcat gactccgata ttttttaaat tttaaggcta aaaaatggat
     5461 aataatctca cttggcatac aagtagcatt acaaaaactc aaagatctaa acttaaaaat
     5521 caaaaaccat gtgttttgtg gtttacggga ttaagcggaa gtggtaaatc cactttggcc
     5581 aatgcagtgg agaaaaaact ttttgagcaa ggttttcata cttatctttt agatggagat
     5641 aatgtacgcc atggacttaa tggtgatttg ggatttgatg aagcttcaag agtagaaaat
     5701 ataaggcgta taggagagct ttgtaagctt tttatggatg ctggtatgat agtgctttgt
     5761 gcttttatat ccccttttga aaaagataga aaactagtta aagatctttt agaagaggat
     5821 gaatatatag aaatatttgt cgatacttct ttggaagttt gtgaaaaaag ggatccaaaa
     5881 ggactttata aaaaagcaag acaaggagag attaaaaact ttacaggcat agatagtcct
     5941 tatgaaagac ctaaaaatcc acatatacac ataacaaaag aagatcttaa tgagaatgta
     6001 gatatgattt taggattttt aaataagaaa atataaatga ctgcttatgt gcatataggg
     6061 actatgaaaa cagggacttc aagtatacaa aatttcttat atttaaatcg tagtttattg
     6121 caaaaacaga attattatta tcccattagt ataaaaaaca ttggtagatt gaatgatcat
     6181 aatccttttg cgcacaaatt taatacttta ttaaataaga cagatgattt gaaaatattt
     6241 tctagggaat ttaagaattt aaataatgaa attaagatgt gtaattgtga taaaattatt
     6301 atttctatgg aaaatgtaca atg
//
LOCUS       DBBXOW010000087         6183 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.088, whole genome shotgun sequence.
ACCESSION   DBBXOW010000087 DBBXOW010000000
VERSION     DBBXOW010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6183
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.088"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            411..1923
                     /locus_tag="ACJE1S_001714"
     rRNA            411..1923
                     /locus_tag="ACJE1S_001714"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            2024..2099
                     /locus_tag="ACJE1S_001715"
     tRNA            2024..2099
                     /locus_tag="ACJE1S_001715"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2057..2059,aa:Ala,seq:tgc)
     gene            2108..2184
                     /locus_tag="ACJE1S_001716"
     tRNA            2108..2184
                     /locus_tag="ACJE1S_001716"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2142..2144,aa:Ile,seq:gat)
     gene            2793..5848
                     /locus_tag="ACJE1S_001717"
     rRNA            2793..5848
                     /locus_tag="ACJE1S_001717"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1942 a         1094 c         1481 g         1666 t
ORIGIN      
        1 ttaattggtt atactttcat ttcctttttc agaaaaggac ttaagatctt taaattatag
       61 tctaaagtta actaaagtta aattaagatt ttataaaccc tatgtttcta gttttaaatt
      121 aatctttaat cctagctaaa gcaatctaag tttataaaac tttattatta ctaaacttta
      181 tttacatata ataaatgatt ttttgttttt gttctttaaa attaatattg ttatttcaaa
      241 tcttattagt caatctttga aatctaaata agtgatcgat tgagccagaa ggatttaggc
      301 ataagtaatt atgtaaaatc tattcaatct aaatatttaa agattaaaag tttttctttt
      361 taatcttcat tactttttct ttgaagaaaa agattaaact atctataatt tttatggaga
      421 gtttgatcct ggctcagagt gaacgctggc ggcgtgccta atacatgcaa gtcgaacgat
      481 gaagcttcta gcttgctaga agtggattag tggcgcacgg gtgagtaagg tatagttaat
      541 ctgccctaca caagaggaca acagttggaa acgactgcta atactctata ctcctgctta
      601 acacaagttg agtagggaaa gtttttcggt gtaggatgag actatatagt atcagctagt
      661 tggtaaggta atggcttacc aaggctatga cgcttaactg gtctgagagg atgatcagtc
      721 acactggaac tgagacacgg tccagactcc tacgggaggc agcagtaggg aatattgcgc
      781 aatgggggaa accctgacgc agcaacgccg cgtggaggat gacacttttc ggagcgtaaa
      841 ctccttttct tagggaagaa ttctgacggt acctaaggaa taagcaccgg ctaactccgt
      901 gccagcagcc gcggtaatac ggagggtgca agcgttactc ggaatcactg ggcgtaaagg
      961 gcgcgtaggc ggattatcaa gtctcttgtg aaatctaatg gcttaaccat taaactgctt
     1021 gggaaactga tagtctagag tgagggagag gcagatggaa ttggtggtgt aggggtaaaa
     1081 tccgtagata tcaccaagaa tacccattgc gaaggcgatc tgctggaact caactgacgc
     1141 taaggcgcga aagcgtgggg agcaaacagg attagatacc ctggtagtcc acgccctaaa
     1201 cgatgtacac tagttgttgg ggtgctagtc atctcagtaa tgcagctaac gcattaagtg
     1261 taccgcctgg ggagtacggt cgcaagatta aaactcaaag gaatagacgg ggacccgcac
     1321 aagcggtgga gcatgtggtt taattcgaag atacgcgaag aaccttacct gggcttgata
     1381 tcctaagaac cttttagaga taagagggtg ctagcttgct agaacttaga gacaggtgct
     1441 gcacggctgt cgtcagctcg tgtcgtgaga tgttgggtta agtcccgcaa cgagcgcaac
     1501 ccacgtattt agttgctaac ggttcggccg agcactctaa atagactgcc ttcgtaagga
     1561 ggaggaaggt gtggacgacg tcaagtcatc atggccctta tgcccagggc gacacacgtg
     1621 ctacaatggc atatacaatg agacgcaata ccgcgaggtg gagcaaatct ataaaatatg
     1681 tcccagttcg gattgttctc tgcaactcga gagcatgaag ccggaatcgc tagtaatcgt
     1741 agatcagcca tgctacggtg aatacgttcc cgggtcttgt actcaccgcc cgtcacacca
     1801 tgggagttga tttcactcga agccggaata ctaaactagt taccgtccac agtggaatca
     1861 gcgactgggg tgaagtcgta acaaggtaac cgtaggagaa cctgcggttg gatcacctcc
     1921 tttctagagt acaaagtaat aagtctcaca actattactt cattataaac tcaattgatt
     1981 cttgtttaga tttcaaagat tgatgataaa gctaattgtt tatggggaat tagctcagct
     2041 gggagagcgc ctgctttgca cgcaggaggt cagcggttcg atcccgctat tctccaccat
     2101 ttattaaggg cctatagctc agctggttag agtgcacccc tgataagggt gaggtcacaa
     2161 gttcaagtct tgttaggccc accatagaag tatcaatctt aaaaagataa aaacaagatt
     2221 tgaaatcaag ctttaaaatc taaagcaagt atatatttat aaatatactt tatataccat
     2281 atacttcctt taggttttaa acctaaatgt tctttataat tatcattgtt aagagtcaca
     2341 agcaagtttt aataaaaaca attttacagg acttgttaaa ggataaaact caattatctt
     2401 ttctttggtt ttatttatat cttttaacta tctttatttt ttataataaa gagaatatta
     2461 gatctaaaat tttaaattaa agataagttt caaactcacg acttagttta gatattttta
     2521 gtatttatat taagtgtttg aatgctttcc gtcttaagat aatgaagtct tatcgtaaaa
     2581 actttaacaa ggaagtgatg cgttttagaa tcaataataa aaggtagaag ttagattata
     2641 tctaactttt atgcatattc ttagcagaag aagcaagaaa gactattagt ctttaactta
     2701 ctttatcagc ctaatatctt ttaggttggc ggggtaggtc tttagcttgc ttcttagtca
     2761 aggctttgcc ttgacgctaa agaaggtaaa aaaggtaagc tactaagagc gaatggtgga
     2821 tgccttgact ggtaaaggcg atgaaggacg tactagactg cgataagcta cggggagctg
     2881 tcaagaagct ttgatccgta gatttccgaa tggggcaacc caatgtatag agatatacat
     2941 tacctatata ggagcgaacg aggggaattg aaacatctta gtaccctcag gaaaagaaat
     3001 caatagagat tgcgtcagta gcggcgagcg aaagcgcaag agggcaaacc cagtgcttgc
     3061 actgggggtt gtaggactgc aatgtgcaag aggtgagttt agcagaacat tctggaaagt
     3121 atagccatag agggtgatag tcccgtatgc gaaaaacaaa ccttagctag cagtatcctg
     3181 agtagggcgg gacacgagaa atcctgtctg aagctgggtc gaccacgatc caaccctaaa
     3241 tactaatacc agatcgatag tgcacaagta ccgtgaggga aaggtgaaaa gaactgaggt
     3301 gatcagagtg aaatagaacc tgaaaccatt tgcttacaat cattcagagc cctatgtagc
     3361 aatacagggt gatggactgc cttttgcata atgagcctgc gagttgtggt gtctggcaag
     3421 gttaagcaaa cgcgaagccg tagcgaaagc gagtctgaat agggcgctta gtcagatgct
     3481 gcagacccga aacgaagtga tctatccatg agcaagttga agctagtgta agaactagtg
     3541 gaggactgaa cccataggcg ttgaaaagcc ccgggatgac ttgtggatag gggtgaaagg
     3601 ccaatcaaac ttcgtgatag ctggttctct ccgaaatata tttaggtata gcgttgtgtc
     3661 gtaatataag ggggtagagc actgaatggg ctagggcata caccaatgta ccaaacccta
     3721 tcaaactccg aataccttat atgtaatcac agcagtcagg cggcgagtga taaaatccgt
     3781 cgtcaagagg gaaacaaccc agactaccag ctaaggtccc taaatcttac ttaagtggaa
     3841 aacgatgtga agttacttaa acaaccagga ggttggctta gaagcagcca tcctttaaag
     3901 aaagcgtaat agctcactgg tctagtgatt ttgcgcggaa aatataacgg ggctaaagta
     3961 agtaccgaag ctgtagactt gcgcacaact tagattattt aagtttagaa tatgagaaac
     4021 taagttatat gtttagttat atttttactg atttttatag agtaaagata gaaataaaac
     4081 ttagtaaaat cagtaaaaat attcttagac taaagttaag tagtttaagt tgtgtgcaag
     4141 tggtaggaga gcgttctatt tgcgtcgaag gtataccggt aaggagtgct ggagcgaata
     4201 gaagtgagca tgcaggcatg agtagcgata attaatgtga gaatcattaa cgccgtaaac
     4261 ccaaggtttc ctacgcgatg ctcgtcatcg tagggttagt cgggtcctaa gtcgagtccg
     4321 aaaggggtag acgatggcaa attggttaat attccaatac caacattagt gtgcgatgga
     4381 aggacgctta gggctaaggg ggctagcgga tggaagtgct agtctaaggt cgtaggaggt
     4441 tatacaggca aatccgtata acaatactcc gagaactgaa aggctttttg aagtcttcgg
     4501 atggatagaa gaacccctga tgccgtcgag ccaagaaaag tttctaagtt tagctaatgt
     4561 tgcccgtacc gtaaaccgac acaggtgggt gggatgagta ttctaaggcg cgtggaagaa
     4621 ctctctttaa ggaactctgc aaaatagcac cgtatcttcg gtataaggtg tggttcgctt
     4681 cgtattagga tttactccga aagcgaagaa acttacaaca aagagtccct cccgactgtt
     4741 taccaaaaac acagcactct gctaactcgt aagaggatgt atagggtgtg acgcctgccc
     4801 ggtgctcgaa ggttaattga tggggttagc attagcgaag ctcttgatcg aagcccgagt
     4861 aaacggcggc cgtaactata acggtcctaa ggtagcgaaa ttccttgtcg gttaaatacc
     4921 gacctgcatg aatggcgtaa cgagatggga gctgtctcaa agagggatcc agtgaaattg
     4981 tagtggaggt gaaaattcct cctacccgcg gcaagacgga aagaccccgt ggacctttac
     5041 tacagcttga cactgctatt tggataagaa tgtgcaggat aggtgggagg ctttgagtat
     5101 atgacgccag ttgtatatga gccattgttg agataccact ctttcttatt tgggtagcta
     5161 accagcttga gttatcctca agtgggacaa tgtctggtgg gtagtttgac tggggcggtc
     5221 gcctcccaaa taataacgga ggcttacaaa ggttggctca gaacggttgg aaatcgttcg
     5281 tagagtataa aggtataagc cagcttaact gcaagacata caagtcaagc agagacgaaa
     5341 gtcggtctta gtgatccggt ggttctgtgt ggaagggcca tcgctcaaag gataaaaggt
     5401 accccgggga taacaggctg atctccccca agagctcaca tcgacgggga ggtttggcac
     5461 ctcgatgtcg gctcatcgca tcctggggct ggagcaggtc ccaagggtat ggctgttcgc
     5521 catttaaagc ggtacgcgag ctgggttcag aacgtcgtga gacagttcgg tccctatctg
     5581 ccgtgggcgt aagaagattg aagagatttg accctagtac gagaggaccg ggttgaacaa
     5641 accactggtg tagctgttgt tctgccaaga gcatcgcagc gtagctaagt ttggaaagga
     5701 taaacgctga aagcatctaa gcgtgaagcc aactctaaga tgaatcttct ctaagctctc
     5761 tagaagacta ctagtttgat aggctgggtg tgtaatggat gaaagtcctt tagctgacca
     5821 gtactaatag agcgtttggc ttatctttaa taaagcatca cttccttgtt aaggttttta
     5881 agaagacttt gaatatagat aatatttaga gtttaataga aatctttcaa gtagagtttg
     5941 tattagaact tgctcttaac attgtttttt aagtattcta aaataaaaac ttatcaaaga
     6001 gagtaaagat ttgattcatt gataagatga aagataagat ttaaaagata aaagtaaaaa
     6061 ttaaaaaaca aaaaaagaaa aataaaaaag aatagaagaa aagcaaaaaa ataaaacaat
     6121 agaataaaaa ataaaagctt tattcttaag ttaaatcttt caaagaatat ttaaataaca
     6181 atg
//
LOCUS       DBBXOW010000088         5912 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.089, whole genome shotgun sequence.
ACCESSION   DBBXOW010000088 DBBXOW010000000
VERSION     DBBXOW010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5912
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.089"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            84..368
                     /locus_tag="ACJE1S_001718"
     CDS             84..368
                     /locus_tag="ACJE1S_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HGG0807240.1"
                     /translation="MAVKITDSCIACGSCIDECPVSAIVDDANNPEGEDRYYVYADKC
                     VECVGHNDQPACASACPTDGCIVWSEIASGQPSRDNIGSDMRDGTTPVFA"
     gene            469..882
                     /gene="ndk"
                     /locus_tag="ACJE1S_001719"
     CDS             469..882
                     /gene="ndk"
                     /locus_tag="ACJE1S_001719"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HGG0807241.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AEAFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAQPGTIR
                     ADFAESIDANAVHGSDSLENAKIEIEFFFKSNEIC"
     gene            882..1241
                     /locus_tag="ACJE1S_001720"
     CDS             882..1241
                     /locus_tag="ACJE1S_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807242.1"
                     /translation="MKIAFSRINNTNYPFKLNLENVVFEGNLVKVNPKLVKINATMQG
                     FVYRPCDSCGEELELEIKENLDLFASDGIFKDNTNELSNTIEFFDGHIDLIEVAVSEL
                     EAYLSDYFYCNNCKNKS"
     gene            1265..1411
                     /gene="rpmF"
                     /locus_tag="ACJE1S_001721"
     CDS             1265..1411
                     /gene="rpmF"
                     /locus_tag="ACJE1S_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HGG0807243.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPN
                     TKEY"
     gene            1417..2403
                     /gene="plsX"
                     /locus_tag="ACJE1S_001722"
     CDS             1417..2403
                     /gene="plsX"
                     /locus_tag="ACJE1S_001722"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HGG0807244.1"
                     /translation="MIDIAIDAMGGDFGEKPIIEGVIEALKERPFNAILVGNPNILRP
                     LIPKNLEQYIQYENANEVFSMNENATDALKRKETTIYKTIELVKNGKAKAAVSAGHSG
                     ASMSLATLRLGRLKGVLRPAIATLMPNTTSKTLFLDVGANTDCKAENLFQFAIMGDAY
                     AKEIMKISKPRLALLSNGEEECKGNELTKEAHQLMKQIPSFVGNAEGRDIFNGEVDVL
                     VCDGFDGNVILKACEGVATAIIHILKNEIKQSLISKIGALLMKPSFKRLKKHIDWQEY
                     GGAPLLGVNGCVIISHGKSDARAIKNAIFQAINFSESNINQIIEKELEKYNA"
     gene            2396..3373
                     /locus_tag="ACJE1S_001723"
     CDS             2396..3373
                     /locus_tag="ACJE1S_001723"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HGG0807245.1"
                     /translation="MPKASLKSIASYIPEQILSNHDLEKIIDTTDEWITRRTGIKERR
                     IASKDESTSDLGTKAAIKAIERANLKPQDIDAILVATLSPDYFTMPSTACKIAANLGL
                     NGISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKASSIMDYTDRSICILFG
                     DGAGAGVVSLDENNPIIDVHTASNGNYGDLLMTERSQESKEASSLAMKMKGNEVFKIA
                     VQTLSNDVVEILSKNQILPEQIDLFIPHQANLRIIKAVQERLNLSDEKCVVTVHKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENFS"
     gene            complement(3601..4677)
                     /gene="serC"
                     /locus_tag="ACJE1S_001724"
     CDS             complement(3601..4677)
                     /gene="serC"
                     /locus_tag="ACJE1S_001724"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HGG0807246.1"
                     /translation="MRKINFSAGPSTLPLELLEYAKNELCDYQGKGYSIMEISHRSKV
                     FEEVHFGAMQKAKELYGLNDDYEVLFLQGGASLQFAMIPMNLSLGGVCEYANTGVWTQ
                     KAIKEAQILGVNVKVVASSEESKFDHIPQVEFSDNADYAYICSNNTIYGTQFKNYPKT
                     KAPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGISCLFIRKDMLERSQNKNLPS
                     MLKYSIHAQNQSLFNTPPTFAIYMFNLEMKWLLDQGGLDAIDAKNSQKAAMLYECIDS
                     SEGFYKGHADKKDRSLMNVSFNIAKNSELEPIFVKEAEEVGMLGLKGHRILGGIRASI
                     YNAVTLDQVKTLCEFMKEFAKKYN"
     gene            complement(4687..5850)
                     /gene="xseA"
                     /locus_tag="ACJE1S_001725"
     CDS             complement(4687..5850)
                     /gene="xseA"
                     /locus_tag="ACJE1S_001725"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HGG0807247.1"
                     /translation="MKVSELNLKAKALLETHLNDIVLSGELSKITMHGSGHWYFDLKD
                     EKSSIACAMFKGANLKVDFQPKVGDFLELVGSVSLYAESGRYQFIVSSMKKAGMGDLE
                     AQFLALKERLQKEGLFNSEYKKTLPQFPKKIGIITSKTSAALQDMLKLINQKEYFLAK
                     IYVFNALTQGSGAAYSLIQALKKADKIGLDVIIIARGGGSREDLFCFNDEGLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLLYSRLDLEQGLDLLEEKLTKLW
                     ESKLEYCENLLSNLHKFFKAKSLETMIEAKEKQLAFLLKQAKIIIESKIQKAELELQK
                     LQNAFFQHENFFKKSKNLISIKKNGKIANLEELKSEDIITLSSQTLQKEAKIL"
BASE COUNT         2031 a          962 c          996 g         1923 t
ORIGIN      
        1 caaaattata gttttttaag aatactttga taaaatgctt agttgaaaaa agtaaatttc
       61 atattaatca aaaaggagac aaaatggctg taaaaattac agatagttgt attgcttgtg
      121 gttcttgtat tgatgagtgt ccagttagcg caatcgttga cgatgcaaac aatccagagg
      181 gcgaagatag atattatgtc tatgcggata aatgtgttga atgtgtagga cacaatgatc
      241 aaccagcttg tgcaagcgca tgcccaactg atggctgtat agtatggagt gaaattgctt
      301 cagggcaacc aagtcgtgat aatatcggta gcgatatgag agatggaact accccagttt
      361 ttgcataatt ctacaaaggc tagttaaaaa gctagcctct ttttaacttt ttttaaacaa
      421 attcaagtat aattttaagc tttataaaaa ccaaggagta taatcaaaat ggaaaaaacc
      481 ctatcgatta tcaaacctga tgccgtaaaa aaaggtgtta taggtaaaat tttagatcgt
      541 ttcgaaagta atggattaag aattgctgct atgaaaaaag ttcaacttag caaagaacaa
      601 gctgaagctt tttatgctgt tcacaaagaa agaccttttt ttaaagattt ggttgaattt
      661 atgatcagcg gccctgttgt ggtttctgtt ttagaaggcg aaggtgctgt tcttaaaaat
      721 agagatttaa tgggagcaac aaacccaaaa gaagcacaac ctggcaccat tagagcagat
      781 tttgctgaaa gcattgacgc aaacgctgtt catggaagcg atagcttaga aaatgcaaaa
      841 attgaaattg aatttttctt taaatctaac gaaatttgct aatgaaaata gccttttcta
      901 ggattaacaa tactaactat ccttttaaac tcaatcttga aaatgttgtt tttgaaggaa
      961 atttagtaaa agtaaatcct aaacttgtta aaataaatgc cacaatgcaa ggttttgttt
     1021 atagaccttg tgatagctgt ggtgaagaac ttgagcttga aataaaagaa aatttggatc
     1081 tttttgcaag tgatggtatt tttaaagata atacgaatga attaagcaat accattgaat
     1141 tttttgatgg tcatattgat ttaatagaag ttgcagttag tgagcttgaa gcttatttga
     1201 gtgattattt ttattgtaat aattgcaaaa ataaaagcta acaaatttta aaaaaggaga
     1261 taaaatggca gtacctaaga gaagagtgag taaaactcgt gcagcaaaac gcagaactca
     1321 ctataaagta agtcttccta tgcctataaa agacaaagat ggaagctaca aaatgcctca
     1381 tcgtgcaaat ccaaatacta aggaatacta aaatcaatga ttgacattgc tatagatgca
     1441 atgggcggag attttggaga aaagcccatt atagaaggcg ttatcgaggc tttaaaagaa
     1501 aggcctttta atgctatctt agtgggaaat cccaatattt taagacctct aatacctaaa
     1561 aatttagaac aatacattca atatgagaat gccaatgaag ttttctctat gaatgaaaat
     1621 gcaacagatg ccctaaaaag aaaagaaact acgatttata aaaccatcga acttgtcaaa
     1681 aatggaaaag caaaagccgc tgtttcagca ggacatagtg gtgcaagtat gtctttagca
     1741 actttaagat tgggcagact caaaggagta ttacggcccg caattgcaac cttaatgcca
     1801 aatactacaa gtaaaacttt gtttttagat gtgggtgcaa ataccgactg taaagccgaa
     1861 aatttatttc aatttgctat aatgggcgat gcttatgcaa aagaaattat gaaaatttca
     1921 aaacctcgcc tggctttatt gtctaatggc gaagaagagt gtaaaggcaa tgaacttact
     1981 aaagaggctc atcagcttat gaaacaaatt cctagttttg ttggaaatgc tgaaggtaga
     2041 gatattttta atggtgaagt tgatgtctta gtttgtgatg gatttgatgg caacgtaatc
     2101 ctaaaagcct gtgaaggcgt agctacagca attatccaca ttttaaaaaa tgaaatcaag
     2161 caatctttga tatcaaaaat aggcgcattg ctaatgaaac cttcatttaa aagacttaaa
     2221 aaacatattg attggcaaga atatggcggc gccccactgc ttggtgtcaa cggctgcgtt
     2281 attataagtc atggaaaaag cgatgctaga gcaatcaaaa atgctatttt tcaggctatt
     2341 aactttagtg aatcaaatat caatcaaata atagaaaagg agcttgagaa atacaatgcc
     2401 taaagcgagt ttaaaaagta tagcttctta tatacctgaa caaattttaa gtaatcacga
     2461 tcttgaaaag attattgata caacagatga gtggatcaca agacgcacag gtataaaaga
     2521 aagacgcatt gcaagcaaag atgaaagcac aagtgattta ggcaccaaag cagctataaa
     2581 agctatagaa agagcgaatt taaaaccaca agatattgat gcgatactag tagctacctt
     2641 aagccctgat tattttacca tgccttcaac tgcttgtaaa atcgcagcaa atttaggact
     2701 taatggaatc agtgcctttg atatttcagc agcctgctca ggttttatct atcttttaga
     2761 gcaagctaag gctcttgtag aaagtggttt gaaaaaaaat gttttaatca taggagccga
     2821 aaaggcaagc tctatcatgg attataccga taggagtatt tgtatacttt ttggcgatgg
     2881 tgcaggtgct ggagtagtaa gtcttgatga gaacaatcct ataatcgatg tacatacagc
     2941 aagcaatgga aattatggtg atttactaat gacagaacgc tctcaagaat caaaagaagc
     3001 ttcaagccta gcaatgaaaa tgaaaggtaa tgaagtcttt aaaatagcgg tgcaaacttt
     3061 aagcaatgat gtcgttgaaa ttttatctaa aaatcaaatt ttgcctgaac aaattgatct
     3121 ttttatccca caccaagcaa atttacgcat cattaaagct gtgcaagaaa gactgaattt
     3181 aagcgatgaa aaatgcgttg taactgtgca caaatatggc aatacctcag ctgcttctat
     3241 ccctatggcg atgaatgatg cctatgaaga gggtcgtctt aaaaaaggga atttgatcct
     3301 gcttgatgct tttggcggtg gttttacttg gggttctgcc ttacttaaat ttggtggtga
     3361 gaatttctcc taaaacctta aatttacatt ttaacactgt gtaaaattta ccttaaaaaa
     3421 gatttgaacc aaatctaatt aaactttcta tatcttaata ctagatattt tattggatta
     3481 aatttatttt gaaaatttac atatttctat ttttactttt ttgggatttt ttatttaaaa
     3541 cttgagtaaa ttttctgcca cctttgagtg aattttatgc aaagtggcag aaggattagt
     3601 ttagttatat tttttagcaa attctttcat aaattcacac agggttttaa cctgatctaa
     3661 agtaacagca ttataaatac ttgcgcgaat tcctcctaaa attctatgac ctttaagtcc
     3721 tagcataccc acttcttcag cttcttttac aaatattggt tcaagttctg aatttttagc
     3781 gatattaaag cttacattca tcaaggatct atctttttta tcagcatgtc ccttgtaaaa
     3841 tccttcactt gaatcaatac actcataaag catcgcagct ttttgagaat ttttagcatc
     3901 gatagcatct agtccacctt gatctaaaag ccatttcatt tcaagattaa acatataaat
     3961 tgcaaaagtc ggaggagtat taaacaaaga ttgattttgt gcatgtatgg agtattttaa
     4021 catacttggc aagtttttat tttgagatct ttctagcata tctttgcgta taaaaagaca
     4081 gctgatgccc gaaattcctg catttttttg tactccgcca taaaaaagcg caatatttga
     4141 aaaatcaact tttcttgaga aaaaatcact cgaagcatcg acgattaaag gggctttggt
     4201 tttaggatag tttttaaatt gtgtgccata aatagtatta tttgagcaaa tataggcata
     4261 atcggcatta tcactaaact caacttgagg tatgtgatca aacttacttt cttcactact
     4321 agcaacaacc ttgacattta cccctaaaat ttgagcttct tttatagctt tttgagtcca
     4381 aactcctgta tttgcatact cacaaacccc gcctaaagat aaattcatag gtatcatagc
     4441 aaattgcaaa ctcgcaccac cttgcaaaaa taaaacctca tagtcatcat ttaaaccata
     4501 aagttctttt gctttttgca ttgctccaaa atgcacttct tcaaatactt ttgaacggtg
     4561 agaaatttcc atgatagaat agcccttgcc ctgataatca caaagctcat ttttggcata
     4621 ttctaaaagc tccaaaggta aagtagatgg acctgcgcta aaattaattt ttctcattat
     4681 ttttccttat agaatttttg cttctttttg taaagtttga gaactcaaag tgatgatatc
     4741 ttcacttttt agctcttcta aatttgctat tttaccattt tttttaatgg aaattaggtt
     4801 tttgcttttt ttaaaaaaat tttcatgctg aaaaaaagca ttttggagtt tttgcagttc
     4861 taattcagct ttttgaattt tgctttctat tatgattttt gcttgcttaa gcaaaaatgc
     4921 aagctgtttt tcttttgcct ctatcatagt ttctaaagat tttgctttaa aaaatttgtg
     4981 tagattgctg agtaaatttt cacaatattc taatttactt tcccaaagct ttgtcaattt
     5041 ttcttccaaa aggtcaagtc cttgttctaa atcaagtcta gaataaagca aagtatcgat
     5101 agcagctgat ggagtgggtg ctctaaaatc agctacaaaa tcactgatca cataatcaat
     5161 ctcatgacca attgccgaaa taataggtgt tttagcttta aaaatttccc ttgctaagcc
     5221 ctcatcatta aaacaaaaaa gatcctctct gctaccaccc cctctagcga taatgataac
     5281 atctaatcct atcttatcag ctttttttaa agcttgaatc aaagaataag ctgcgccact
     5341 tccttgcgta agtgcgttaa aaacataaat tttagctaga aaatattctt tttgattgat
     5401 aagttttaac atatcttgca aggccgctga agtctttgaa gtgatgattc cgattttttt
     5461 agggaattga ggcaaggttt ttttatactc actattaaac aatccttctt tttgcaagcg
     5521 ctcttttaat gctagaaatt gagcctctaa atctcccatt cccgcttttt tcatgctact
     5581 tacaataaat tgataacgcc cactttcagc atacaaactc acacttccaa caagctctaa
     5641 aaaatcaccc accttaggct gaaaatcaac ttttaaattt gcacccttaa acatagcaca
     5701 agctatactt gatttttcat cttttagatc aaaataccaa tgtcctgatc cgtgcatggt
     5761 gatttttgaa agctctccgc ttaaaacaat atcattaaga tgtgtttcca ataaagcctt
     5821 ggcttttaaa tttaattcgc ttactttcat gattttccat atataaagta ttacaaaaag
     5881 tatcaattta actatatttt gtataataaa gt
//
LOCUS       DBBXOW010000089         5705 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.090, whole genome shotgun sequence.
ACCESSION   DBBXOW010000089 DBBXOW010000000
VERSION     DBBXOW010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.090"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            16..963
                     /locus_tag="ACJE1S_001726"
     CDS             16..963
                     /locus_tag="ACJE1S_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HGG0807248.1"
                     /translation="MQVFFNTFKEFLYLFVELSVLFIGISFLISIINQKYEGMFRKQL
                     SGDKISSYFKAIFLGALTPFCSCSTIPLLKAFLEARVKLSVCLAYLFTSPLINPIIFT
                     MLFVTFGLKLSLMYVLFLVIFIFIISLIFSKFKEEYFLKHTPKNSAPSIFTQNAKNIG
                     KIVFKPSSCCANTQNKTNDTKINFKKLFKESIANYKKLLPYIVIAVLIGALIHDFIPQ
                     EILQKYLSGNEILSIILAAFFGVLLYLRVETIIPIGLILLQMGISQGVIMSFLIAGAG
                     CSLPELVLLKQMFKMKFLLLFISIILSVAISFGMLINFI"
     gene            973..1290
                     /locus_tag="ACJE1S_001727"
     CDS             973..1290
                     /locus_tag="ACJE1S_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR/SmtB family transcription factor"
                     /protein_id="HGG0807249.1"
                     /translation="MQKFLTIISAINDESRVLILYHLLKYQELCVCDLQKLLNMGQSR
                     LSRHLKILKDAGFLYVKRKGTWAYYGINNELLKLHSDLFENIKNLDIDNIVLEQNTCE
                     NDK"
     gene            1287..1709
                     /locus_tag="ACJE1S_001728"
     CDS             1287..1709
                     /locus_tag="ACJE1S_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HGG0807250.1"
                     /translation="MKLAFICIHNSCRSQMAEALARHKAEKMGVDIEVFSAGSDTSKG
                     VNSQAIRLMREIYQIDMKKHYSKLIDSLPQNLDIVVSMGCGVACPSLKSRYYFDFGLK
                     DPSGSYDDEFKKIIQILDYKITALLQAIKTNSLNDFTC"
     gene            1703..2732
                     /gene="acr3"
                     /locus_tag="ACJE1S_001729"
                     /pseudo
     CDS             1703..2732
                     /gene="acr3"
                     /locus_tag="ACJE1S_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847606.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter Acr3"
     gene            complement(2741..3169)
                     /locus_tag="ACJE1S_001730"
     CDS             complement(2741..3169)
                     /locus_tag="ACJE1S_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HGG0807251.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWAKWIEWLRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDRFNPESKDYQPCDKFCKES"
     gene            3248..5251
                     /locus_tag="ACJE1S_001731"
     CDS             3248..5251
                     /locus_tag="ACJE1S_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HGG0807252.1"
                     /translation="MLKITKIKRKNMNNIKIKLSVIANSIAIFALSILSIISFYFTKD
                     SLYQSTLYTETELLKATQISIEDFRSRNISLLNTLEKDILNLPYEALNSQDNIVNNVG
                     AILKYYRNSGNLLAVYIGLDNGENIVSDDLSEKKNTNITINGKANNYNATTREWYKEA
                     RNSNQIYITPAYIDAVSNEYCITYSKALYKDGKFIGVLGIDVLLTSLQDQIARTPGNI
                     FVFDNKDRIFAATNKALLDPSVNHSPVLNAYKAHGDNNFFSYKLNNEERLGVCKKVFA
                     YTACITESADVINKPIFKAAYIQVIALIVMISISIILLYFIVSKYLSPLAAIQTGLTS
                     FFDFINYKTKNVSTIEVKSNDEFGQISNAINENILATKRGLEQDNQAVKESVQTVSVV
                     EGGNLTARITANPRNPQLIELKNVLNRLLDALQARVGSDMNEIQRVFNSYKSLDFTTE
                     VKDANGAVEVTTNALGQEIIKMLKQSSDFANALANESGKLQTAVQSLTTSSNSQAQSL
                     EETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQIN
                     ESVAQIDQTTKDNVEIANESAIISNTVSDIANNILEDVKKKRF"
BASE COUNT         1915 a          850 c          844 g         2096 t
ORIGIN      
        1 tttttaggaa aaacaatgca agtatttttt aacactttta aagagttttt atatctattt
       61 gtcgagcttt ctgtgctttt tataggaatt tcttttctta ttagcattat caaccaaaaa
      121 tatgaaggaa tgtttagaaa acaactgagc ggagataaaa tttcaagcta ttttaaagct
      181 atatttttag gtgctttaac gcctttttgt tcctgctcta ccataccgct tttaaaagca
      241 tttttggaag ctagggtaaa acttagcgtg tgcttggctt atctttttac ctcacctctt
      301 ataaatccta tcatttttac catgcttttt gttacctttg gcttgaaatt aagtcttatg
      361 tatgtattgt ttttagtaat ttttattttt ataatttctc ttattttttc aaaatttaaa
      421 gaagagtact ttttaaaaca tactcctaaa aactcagccc caagcatttt cacacaaaat
      481 gctaaaaaca taggtaaaat agtctttaaa ccaagctctt gttgtgctaa cactcaaaac
      541 aaaactaacg atacaaagat aaatttcaaa aaacttttta aagagagtat tgcaaactat
      601 aaaaaattgc taccctatat agtaatcgca gtgcttatag gagctttgat ccatgatttc
      661 atccctcaag aaattttaca aaaataccta agtggcaatg aaattttaag cattatccta
      721 gcagcgtttt ttggagtttt gctttactta agagtagaaa ccatcatccc tataggcttg
      781 atacttttac aaatgggaat ttctcaaggt gtgattatga gttttttaat cgcaggtgcg
      841 gggtgttctt tacccgaact tgttttactt aagcaaatgt ttaagatgaa atttttatta
      901 ttgtttatat ctatcatttt aagcgtagcc atatcttttg gtatgcttat aaatttcata
      961 taaggaaaat aaatgcaaaa gtttttaacc atcatttcag cgatcaacga tgaaagcaga
     1021 gtgcttatcc tataccatct tttaaaatat caagaactgt gcgtgtgtga tttgcaaaaa
     1081 cttttaaaca tggggcaatc aagactttca agacatttaa aaattttaaa agatgcagga
     1141 tttttatatg tcaagcgtaa gggaacttgg gcgtattatg gtatcaacaa tgagctttta
     1201 aaactgcatt ctgacctttt tgaaaatatt aaaaatctag atattgacaa catagtttta
     1261 gaacaaaaca cttgcgagaa cgataaatga aacttgcatt tatttgtatt cacaatagct
     1321 gccgttctca aatggcagaa gcactagcta ggcataaagc tgaaaaaatg ggcgtagata
     1381 tcgaagtatt ttccgcagga agcgacactt ctaagggtgt aaattcacag gctataagac
     1441 ttatgcgtga aatttatcaa atcgatatga aaaagcatta ttctaaactc attgattctt
     1501 tgcctcaaaa tttagacata gtcgtaagta tgggttgtgg cgtggcttgt cctagcttaa
     1561 aatcaaggta ttattttgat tttggattaa aagatcctag cggaagttat gatgatgaat
     1621 ttaagaaaat aattcaaatt ttagattata aaataacagc tcttttacaa gccataaaga
     1681 caaattctct taatgacttt acatgttagg ttttatcgat agatttctca cgctttggat
     1741 atttttagct atttttttgg gtttaatttt aggtatcatt ttccccaata tcgctttatt
     1801 ttggaattta tttgagtaca agtctgtaaa tgtagtattg actttatgtc ttattttgat
     1861 gatgtatccg cctttggcta aggttgatta tgcaaagctt tcaaaggtat ttgattctaa
     1921 aaaagttatc ttgctttcta tgattttaaa ttggtttata ggcccttttg cttatgttta
     1981 tcttagcttt tattttctta aaagacgagc ctttatatat gcaaggagtt atcatcatcg
     2041 gcttggcaag atgtatcgca atggtggtgg tatggagcga tttagcaaaa ggtgatagag
     2101 aatacaccag tgctttagta gcgatgaata gcatttttca aattttattt ttttccactt
     2161 tggcttatat ttatctggat tttttaccaa aattactagg tcaaagcact ttagctacaa
     2221 gtttagatat agatttttca gctctaagta aaaatgtttt gatttattta ggaattcctt
     2281 ttttaatggg ctttataaca agaaccctac ttttaaaata caaaagcaaa cgatggtacg
     2341 aaaatacctt tttacctaaa atcagcccta tagctcttat caccctgcta gcaactatta
     2401 tcattatgtg ttcttacaaa gcaaatgaag tatttcacct gcctttagaa gctttaaaaa
     2461 tagcctttgt tttgactttg tattttatct tcatgttttt tctaacttgg tttatttcta
     2521 agaaaaatca tctttcttat cctaaaactt gttctttatg ctttagtgct agtggaaata
     2581 actttgaatt agctataatc atttgtattg ctacttttgg gcttcactca gaacaagctt
     2641 ttgcaagcat tataggcccc ttagtagaag ttcctgtact tatcttactt gtaaaatggg
     2701 cattaggcaa aagtttaaat tctaaaaaat gaatcaagcc tcatgattct ttgcaaaact
     2761 tatcgcaagg ttgatagtcc ttgctttctg gattaaacct atcgacttca tttgcaagca
     2821 tttcttcata aatttttatc tttttgctta aaactttttc actttctttt aatgttttaa
     2881 tctggttttg taattttttc tttgtttgct ttaacatctc ttgtctctct ttggcagttt
     2941 ttatacccaa agagcaaagt tttatataat gtttgacttg ttctattggc atacctgaaa
     3001 ttctaagcca ttctatccat tttgcccatt ctatatcgct ttttgaaaaa tatttcacac
     3061 tattttcatc tttttgaaca aaaggaaaca aacctttttt agcccaaaat cttaaagtat
     3121 gagcactaat ttttgtttct ttttctactt tttttatagt ataagccata ttttctcctt
     3181 tttaagataa aaataaaaaa tttattttat tttttgtgat aaaataatag ccaaattatt
     3241 tagctttatg ctaaaaataa caaaaattaa aaggaaaaac atgaataata tcaaaataaa
     3301 actttctgtt attgcaaatt caattgcaat ttttgcttta agtattttga gcatcattag
     3361 cttttacttt acaaaagatt ctttgtatca aagtacgctt tatactgaaa cagaacttct
     3421 taaagcaaca caaatttcta tagaggattt tagatccaga aatatatctt tgcttaatac
     3481 tcttgaaaaa gatatattaa acttacccta tgaagcatta aattctcaag ataacatagt
     3541 taataatgta ggggccatat taaaatacta ccgcaatagt ggaaatttgc ttgctgttta
     3601 tattggttta gataatggtg aaaatatcgt gagtgatgat ctaagcgaga aaaaaaatac
     3661 taatataact ataaatggaa aagccaacaa ctataatgca actactaggg aatggtataa
     3721 agaagctaga aatagtaatc aaatctatat aaccccagct tacattgatg ctgttagtaa
     3781 tgaatactgc attacttact ctaaagctct ttataaggat ggtaaattta ttggtgtttt
     3841 aggaattgat gttttattaa ctagtttaca agatcaaatc gctagaactc caggcaatat
     3901 ctttgttttt gataataaag atagaatttt tgcagccacc aacaaagctt tattagatcc
     3961 ttcggtaaac cattctcctg ttttaaatgc atataaagct catggtgata acaacttctt
     4021 ctcttataag ctaaataatg aagaaagact tggagtttgt aaaaaagtat ttgcatatac
     4081 agcttgtatt accgagagtg cagatgtaat aaataaacct atatttaaag cagcatatat
     4141 acaagttata gccttaattg ttatgatatc tattagcatc atcctacttt atttcatcgt
     4201 atcaaaatac ctctccccac ttgcagctat ccaaacaggt ttaacttcat tctttgattt
     4261 tatcaactat aaaacaaaaa atgtttctac tatagaagta aaaagcaatg atgaatttgg
     4321 acaaatctca aatgctatca atgaaaacat tcttgctact aaaagaggct tagaacaaga
     4381 caatcaagcc gttaaagaat cagttcaaac cgtatcagtt gtagaaggtg gtaatctaac
     4441 agcaagaatt actgctaatc caagaaaccc acaacttatt gaacttaaaa atgttctaaa
     4501 tagacttctt gatgctttac aggctagagt aggttctgat atgaatgaaa ttcaaagagt
     4561 atttaatagt tataaatctc ttgactttac tactgaagta aaagatgcca atggagctgt
     4621 agaggtaact actaatgcac taggacaaga aatcattaaa atgctaaaac aaagttcaga
     4681 ctttgctaat gctttagcta atgaaagtgg aaaattacaa actgctgttc aaagcttaac
     4741 cacttcttca aattctcaag ctcaatcttt agaagaaact gcagcagctt tagaagagat
     4801 cacttcttct atgcaaaatg tttcagttaa aactagtgat gttatcactc aatctgaaga
     4861 gattaaaaat gttacaggta ttataggtga tattgcagat caaatcaatc ttttagcttt
     4921 aaatgcagct attgaagcag ctcgtgctgg agaacatggt agaggctttg cagtggtagc
     4981 tgatgaagtt agaaagttag ctgaaagaac tcaaaagtct ttatcagaaa ttgaagctaa
     5041 tactaattta cttgttcaat ctatcaatga tatggcagaa agtattaaag aacaaactgc
     5101 aggtatcact caaatcaatg agagtgtagc tcaaattgat caaaccacta aggataatgt
     5161 agagattgct aatgagtctg ctattatttc taatactgta agtgatatag ctaataacat
     5221 acttgaagat gtgaaaaaga aaaggttttg attaaactaa tatgaaatat tgattttaca
     5281 tattagttta tatgttggct aatatataca atttagattg atatgcaagt atcaatctaa
     5341 agattttgat ttgttgatac ttttaactta ttatttacta acacttttaa ttgcttattc
     5401 attaatatct ttaattcatt atttgttaag ttctaggtta ggtattggtt tgtttttata
     5461 gttccttatt tactagttta ttctgtattt tattgttata ttgttgctct tgtgaattaa
     5521 tttgcttatc cattgaattt atttctcact tcacttaaaa taaatcacct tcttgattaa
     5581 attccttact taacttcatg ttttgcctac tcgaaaaaat gactcacttt atagattgta
     5641 aaaattaata tacgctatat aactttgttc gcttataaat ttatacatat ttatacccaa
     5701 aattg
//
LOCUS       DBBXOW010000090         5632 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.091, whole genome shotgun sequence.
ACCESSION   DBBXOW010000090 DBBXOW010000000
VERSION     DBBXOW010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5632
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.091"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            96..959
                     /locus_tag="ACJE1S_001732"
     CDS             96..959
                     /locus_tag="ACJE1S_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HGG0807253.1"
                     /translation="MATDMNEILLRSVEVLPPLPDTINKLRKYINESGSNVKIDEIAN
                     IISSDPLMTAKLLRLANSPFYGFSREITSLAQVVSLLGIGNIVNTIMADSIRDSFKID
                     VSPYGLSTTEFVNKCSEETSFIMDWLGNEDKKLSHLLVPCSMLLRLGIVVFSNFLIQN
                     KKDAEFLARLEKNNFSDLSMVENEFLGVDHISFLGFLLYRWKFDDMLVETICFARSPH
                     AARNEVKKSAYALSVVDHLFTPHNNFSSFNIKASIALINEARSQGIDFNLDNFISKLP
                     KEAKENLIKEG"
     gene            981..1457
                     /gene="cheQ"
                     /locus_tag="ACJE1S_001733"
     CDS             981..1457
                     /gene="cheQ"
                     /locus_tag="ACJE1S_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HGG0807254.1"
                     /translation="MKSIILPPNEFLDHYVLNAEFHRLAGISKNAYKFWKKVEIGRYQ
                     GTRIIFLHKNSILEKHREVLKQCSDLSGFVLASAFCSFTGLAPSHLVKKNNSSIYKLL
                     DLKEIHGIKFVNLKKFYDFLGLNYYQHIYIEKCHFFSPTPFEKRIKITESMCVGYY"
     gene            complement(1426..2736)
                     /locus_tag="ACJE1S_001734"
     CDS             complement(1426..2736)
                     /locus_tag="ACJE1S_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0807255.1"
                     /translation="MRKILSKKDIKTLGLSSLGGTLEFYDFIIFAFFSSYISKNFFPE
                     NLSPFWQLFNTYGIFAAAYVVRPLGGIVMAHFGDKFGRKKMFMLSILLMVIPTFALAF
                     IPSYESIGYLCVVFLMLIRIAQGISIGGELPGAWIFVYEHSPQGQRRTYIGFLTASVV
                     GGILLGSIVFLLMHKIYTQEELYEWAWRVPFFLGGIFGLISIYLRKFLSETPVFEQMR
                     KENVLEKFPLKEVFKRAKAGVLISMLITWVLTGCIIVMILFIPKYMAEILQFDTNFQT
                     YLQMGGIFFISLGCIISGILADKIGIFKSSIIFSLFFGLACAFYFHFLYNTNADITLV
                     SIFYLLACLFGGVMNFCPLIMNEAFEAKIKFSGLSFSYNIAYAIAGGITPQLTLLLHK
                     FAFANLDNAWRFSLGYYMFLIVLLALLSAFIFRYLNNTQRTYSQ"
     gene            complement(2739..2891)
                     /locus_tag="ACJE1S_001735"
     CDS             complement(2739..2891)
                     /locus_tag="ACJE1S_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HGG0807256.1"
                     /translation="MAYDDEDLEFDDYEGEEDEYAHNHHKSYNYDDDDYDFDDEANDD
                     DFYEID"
     gene            2986..3459
                     /gene="moaC"
                     /locus_tag="ACJE1S_001736"
     CDS             2986..3459
                     /gene="moaC"
                     /locus_tag="ACJE1S_001736"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061799 - cyclic pyranopterin
                     monophosphate synthase activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HGG0807257.1"
                     /translation="MELTHLDENNRPKMVDVSQKDISKRVATASGMISMSEEAFKAIK
                     NNTAKKGPVLQTAVIAAIMGAKKTSEIIPMCHPLMISKVETDIVEFPKDYTFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKTMKISEIVLESKEGGKSGKFVRS"
     gene            3437..3700
                     /locus_tag="ACJE1S_001737"
     CDS             3437..3700
                     /locus_tag="ACJE1S_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HGG0807258.1"
                     /translation="MVNLCDLKQEPIVNYPTFWDYKVIFEAHVHAGALFEELLGQRDF
                     KYKHSNASSSGKYQSFLLSVYVDSKKDRLDIFEKLKAKAKFVL"
     gene            3715..4851
                     /locus_tag="ACJE1S_001738"
     CDS             3715..4851
                     /locus_tag="ACJE1S_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807259.1"
                     /translation="MKNTLIIFENSLSNLKKDEVKDLLEDLSFNLAYKQISQDPHSTK
                     KILNSLLVEFLTILKKLDLFDDENVAKVIKALVKASVGDAQNILYEYISEAELLNKQI
                     ENQKNLIKNQISDNFLEFENILQECSFCDEFSSGLNDAILFDIEMLGILKETAESAFL
                     TTLEKAEDIELTSSEIAKSLVYNAICEAHFEKERILKISSIILNTAFEIANESIAYAK
                     DLCLGAIKGTRDGISLAMEKFKTTLAYAKFEEDVSLKSKELIGIEDDFIALLKREIKE
                     QKNPSKDIVENLLEHELDNLFAKFKRLAVESREQLLLVLNDIKKNPKINDFNRLTQRK
                     LHRFKQEILELEKVAGEKYKELNSKKAKKLGVRLWERAKKLIKK"
     gene            complement(4869..5627)
                     /locus_tag="ACJE1S_001739"
     CDS             complement(4869..5627)
                     /locus_tag="ACJE1S_001739"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG0807260.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIIKENIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYSNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLSFKMKFYAKFLVYLEKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDY
                     FFISTGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
BASE COUNT         2071 a          825 c          860 g         1876 t
ORIGIN      
        1 aactttcttg catatatatt aaaaatcatc gtataagtaa attaaaattt agttataata
       61 atagattaat aaaaattata gcccaaggaa aatatatggc aactgatatg aatgaaattt
      121 tacttcgaag tgttgaagtt ttacctcctt tgcctgatac tataaataaa ctaagaaaat
      181 atatcaacga atcgggttct aatgtaaaaa ttgatgaaat tgctaatatt atttcaagtg
      241 atcctttaat gactgctaag cttttacgct tggctaattc tcccttttat ggtttttcaa
      301 gagaaatcac ctctttggct caagttgtct ctcttttggg tataggtaat atcgttaata
      361 ctatcatggc agattcaatt agagatagtt ttaaaatcga tgtatcacct tatggattaa
      421 gcacgacaga atttgtaaat aaatgcagcg aggaaacttc ttttatcatg gattggttgg
      481 gcaatgagga taaaaagcta tcgcatttac tagtgccttg ttctatgctt ttaagacttg
      541 gtattgtagt tttttctaat tttcttattc aaaataaaaa agatgccgag ttcttagcta
      601 gattggaaaa aaataatttt agtgatttat ctatggtaga gaatgaattt ttaggtgttg
      661 atcatatttc attcttagga tttttgcttt atcgttggaa atttgatgat atgctagttg
      721 aaactatttg ttttgctcgc tctccgcacg cagctagaaa tgaggttaaa aaatcagctt
      781 acgctctttc agttgttgat catcttttta cacctcataa taatttttct tcttttaata
      841 tcaaggcttc tatcgctttg attaatgagg ctcgaagtca agggattgat tttaatcttg
      901 ataattttat ttcaaaactt ccaaaagaag ctaaagaaaa cctaataaaa gaaggttaaa
      961 ttgtttattt tattaaatta atgaaaagta tcattttacc tcctaatgaa tttttagatc
     1021 attatgtttt aaacgcggaa tttcatcgtt tagctggaat ttcaaaaaat gcttataaat
     1081 tttggaaaaa agtagaaatt ggtagatatc aagggactcg tattattttt ttacacaaga
     1141 attccatttt agaaaaacat cgagaagttt taaaacaatg tagcgattta agtggttttg
     1201 tgctagcaag tgctttttgt tcttttacgg gattagctcc atcgcatctt gtaaaaaaaa
     1261 ataattcttc aatctataaa cttttagatt taaaagaaat tcatggtatt aaatttgtaa
     1321 atttaaaaaa attttatgat tttttagggc taaattatta tcagcatatt tacatagaaa
     1381 aatgccattt ttttagcccc acgccttttg aaaagcgtat aaaaatcact gagagtatgt
     1441 gcgttgggta ttattaagat atctaaaaat aaaagctgat aataaagcca ataaaacgat
     1501 taaaaacata taataaccca aagaaaaacg ccacgcatta tctaaatttg caaatgcaaa
     1561 tttatgtaat aaaagtgtaa gttgaggggt tatacctcct gcaatggcat aggcgatatt
     1621 ataagaaaaa gaaagtcctg aaaatttaat ctttgcttca aaagcttcat tcattattaa
     1681 aggacaaaaa ttcatcactc caccaaaaag acaagctagc aagtaaaaaa tactgactag
     1741 agttatatcg gcatttgtat tgtaaagaaa gtgaaaataa aacgcacaag ctaagccaaa
     1801 aaacaaggaa aaaataatac tagatttaaa aatacctatt ttatcagcta aaattccact
     1861 tataatacag cccaaagaaa taaagaaaat tccacccatt tgtaaataag tttggaaatt
     1921 ggtatcaaat tgtaaaattt ctgccatata ttttgggata aataaaatca ttacaataat
     1981 acaacctgtt aaaacccaag tgattagcat agagataaga acacctgctt ttgctctttt
     2041 aaatacttct ttaagcggaa atttttctaa aacattttct tttctcattt gctcaaaaac
     2101 aggagtttca cttaaaaatt ttctaagata tattgaaata agtccaaaaa ttccacctaa
     2161 aaagaaagga actctccaag cccattcgta taattcttct tgagtgtaaa ttttgtgcat
     2221 caataaaaat actatacttc caagtaaaat tccacccacc acagaagctg ttaaaaagcc
     2281 tatataagtt cttctttgtc cttgcggtga atgctcatat acaaaaatcc aagcaccggg
     2341 taattctcct cctatggaaa taccttgagc tattcttata agcattaaaa atactacaca
     2401 aagataacca atactttcat aagaagggat aaaggctagt gcaaaagttg gtattaccat
     2461 aagcaaaata cttagcataa acattttttt gcgcccaaat ttatcgccaa aatgtgccat
     2521 cactataccg cctagcggtc ttactacata agctgctgca aatatgccat aggtattaaa
     2581 aagttgccaa aaagggctta aattttcagg gaagaagttt tttgaaatat aacttgaaaa
     2641 gaatgcaaag ataataaaat cataaaattc caaggttcca cctaaagatg aaagtcctag
     2701 cgtttttata tcttttttac taagaatttt tctcattttt aatctatttc ataaaaatca
     2761 tcatcatttg cttcatcatc aaagtcataa tcatcatcat cataattata ggatttgtga
     2821 tgattgtgag catactcatc ctcttcacct tcataatcat caaattctaa atcttcatca
     2881 tcataagcca ttatttactc cttgataaac aaaataaaat ctaattttag cttaaatttg
     2941 attgcttttg ctataatttt ttatattttt taaaaaaggt tgattatgga attgactcat
     3001 ttagatgaaa acaaccgccc taaaatggta gatgtaagcc aaaaagatat aagtaaaaga
     3061 gtggctacag caagcggtat gatcagtatg agcgaagaag cttttaaggc tataaaaaac
     3121 aatactgcta aaaaaggccc cgtacttcaa actgctgtta tagcagctat catgggtgct
     3181 aaaaaaacaa gtgaaattat ccctatgtgt catcctttga tgatttctaa ggttgagaca
     3241 gatatagttg aatttcctaa agattatact tttaaactta tagtaacggt aaaatgcgag
     3301 ggtaaaacag gggtagaaat ggaagcttta agcggcgtta gcataggact tttaactatc
     3361 tatgatatga ttaaagccat cgataaaaca atgaaaataa gtgaaattgt acttgaaagc
     3421 aaagaagggg gtaaaagtgg taaatttgtg cgatcttaaa caagagccta ttgttaatta
     3481 tcctactttt tgggattata aggtgatttt tgaagcgcat gttcatgcag gagctttgtt
     3541 tgaagagctt ttgggacaaa gagattttaa atacaaacat tctaatgcaa gttctagtgg
     3601 aaaatatcaa agttttttac tcagtgttta tgtagatagc aaaaaggatc gtttggatat
     3661 ttttgaaaaa ttaaaagcta aagccaaatt tgtgctttaa gaaagaggga ttaaatgaaa
     3721 aatactttga ttatatttga gaattcttta tccaatctca aaaaagatga agtgaaagac
     3781 ttgcttgagg atttaagttt taatcttgcg tataagcaaa tttcacaaga tccacacagc
     3841 actaaaaaga ttttaaattc acttttggtt gagtttttaa ccattttgaa aaaacttgat
     3901 ttatttgatg atgaaaatgt tgcaaaagtt atcaaagctt tggtaaaagc tagtgtagga
     3961 gatgctcaaa atatccttta tgaatacatc agcgaggcag aattattaaa caaacaaatc
     4021 gaaaatcaaa agaatttaat taaaaatcaa atcagtgata atttccttga atttgaaaat
     4081 atcttacaag aatgttcttt ttgcgatgaa tttagcagcg gattaaatga tgcgatttta
     4141 tttgatatag aaatgcttgg aattttaaaa gaaactgctg aaagtgcttt tttaactact
     4201 cttgaaaaag ctgaagatat agaacttact agcagtgaaa ttgccaaaag tcttgtttat
     4261 aatgctattt gcgaggcaca ttttgaaaaa gagcgtattt taaaaatttc aagtattatt
     4321 ttaaatacag cttttgagat agcaaatgaa tctatagctt atgctaaaga tctttgtctt
     4381 ggtgcgatta aagggactag agatggaatt tctttagcta tggaaaaatt taaaaccaca
     4441 cttgcttacg caaaattcga agaagatgtg agtttaaaaa gtaaagagtt aataggcata
     4501 gaagatgatt ttatcgcact tttaaaaaga gaaattaaag aacaaaaaaa tccatcaaag
     4561 gatatagttg aaaatttatt agagcatgag cttgataatc tttttgctaa attcaaacgc
     4621 cttgctgttg agagtaggga gcaattgctt ttggttttaa atgatatcaa gaaaaaccca
     4681 aaaatcaatg attttaatag actaactcaa agaaaactac atcgctttaa gcaagaaatt
     4741 cttgagcttg agaaagtagc aggggaaaaa tacaaagaat taaattcaaa aaaagctaaa
     4801 aagttaggcg taagactttg ggaaagggca aaaaaactca ttaaaaaata atatcccatt
     4861 ttgggatatt aaatatctat ttctatgcct acaggtgcgt gatctgaacc aaaaatatca
     4921 tctcttatga aagcattttt cagcttgtct tttaaacctg ttgaaatgaa aaaataatcg
     4981 attctccagc ccacatttct ttctcttgcc ttcattctat aactccacca cgagtatttt
     5041 tctttgatat cgccattgat ctctctaaaa gtatcaataa aaccaagttt tagcaaatca
     5101 tcaatccaag ctctttctat cggtaaaaat cccgaggtat tggcatttgc ctttggatgg
     5161 gtaagatcga tttctttgtg tgcggtattg acatcaccac aaatgataat ttcaaagcca
     5221 tcctttaaaa gtttttctaa atacaccaaa aatttcgcat aaaatttcat cttaaagctt
     5281 aaacgctctt catctttttg tccatttgga aaatagatat taaaaagtgc tatgttttta
     5341 aaacgatgtt ctaaaactct gccttcttca tcatcaaaaa attcacattt tttaacttca
     5401 ctatcaaaat tgcaaaggct cataacaccc gagtatccag cccttttggc agaattagaa
     5461 tacatatgct taaaagggta ttcataaatt tttttaggaa atttatcttc atgtgcttta
     5521 atttcttgaa aacctataaa atcaatattt tcttttatta tccaatcaag cgcattttta
     5581 tcacaaatag ctcttaagcc attgacattc catgaaagta gtttcatcag tt
//
LOCUS       DBBXOW010000091         5499 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.092, whole genome shotgun sequence.
ACCESSION   DBBXOW010000091 DBBXOW010000000
VERSION     DBBXOW010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5499
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.092"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..2067
                     /locus_tag="ACJE1S_001740"
     CDS             <1..2067
                     /locus_tag="ACJE1S_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HGG0807261.1"
                     /translation="LSTGINAQELNDKAIQMQKVVVSATGFEQDADNNLRNVIVIDGK
                     DLEKRGFNTLEQALERISGISFVNFGLGRNIDMRGQGSKSNIAVKVMVNGNAINVLDN
                     SHGVTPLESVNLNNIERIEIIPGGGSVLYGSGTRGGVINIITKKEKSDAFALSLKGSS
                     YDHGNLGGNLGVYGAKKINDYLTFGFDIQGFNRDGYQEGYNEKGYFVNTKAYLNTSDN
                     SDLSLNYNYFESKNTSSGYLTKAQIQSDPTQKGSGDNITQINRPEIALDYHHYFSDLY
                     EIQLGAFWQNQKIRYLKDEIPMMGTIAYQTGSGFEDTLTGINLKNKINYKDDSYFIFG
                     YEFANHDAKRTSIVHYNVNTPAFQMSHTMTTLMDMDKQSHSVFALDSHQFNDIFSISG
                     GARYEYSLYDTHRNYTNKMIIFGMEQPSNPELFDADDTSNNFAFEITPNFKYSDTGNI
                     YAKYERGFISPTPAQLVNKDQATQKYYTANLDPEIFDTFELGINDFWWDFYGFNLTLF
                     YTLSKDEISYLGNPHSTGGAFWKYYNIDQTRRLGAELNLHQFLFNDSLILKESLSYLD
                     AQISKGVNDGLRIPYVSKIKATAGVEYAWNKNLSSYIDLSYFSRAKDGGVVDENTGKM
                     SRNSWIKDYFLTDIGVNYNYRNLQILAGIRNLFDKQYYTYQDSTNDQYLAGNGRNYYV
                     EFKYAF"
     gene            2042..3028
                     /locus_tag="ACJE1S_001741"
     CDS             2042..3028
                     /locus_tag="ACJE1S_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FecCD family ABC transporter permease"
                     /protein_id="HGG0807262.1"
                     /translation="MLNLNMRSKNLVIIGLFLAYIITCIIALCLGDENLSPKELLSYA
                     FGENEILRQIIIDGRLPRIIMAILIGMLLASSGAVTQNVFSNPIADPYIIGIASAATF
                     GSVLAYLLKLPDYYYGILGFICSAIFSLAIFKVSSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGSASWFRIGILILPLIFCLMYFYAHKNELNIILSGDD
                     EARNLGVDAQKLKINLLIVSSLAVSFAVAFTGLIAFVGLIIPHTVRLLLRNYDNALVI
                     PFCTAFGGLFLLICDTLARTLIAPVQIPIGVLTAFFGAPVFLYLALSARRFL"
     gene            3028..3804
                     /locus_tag="ACJE1S_001742"
     CDS             3028..3804
                     /locus_tag="ACJE1S_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG0807263.1"
                     /translation="MLKIQNLSFSYHKKELLKNINLELQNKAFIGILGPNGSGKSTLL
                     KLILKNLNISKGEISLFNTNIKNFALKEFAQLCGFVPQNSGLNTPLKVIDVLLMSKFT
                     NLKHAFCDYSKEDILEVEKFAKTLKLENFLERNMLSLSGGEFQRVLLARALLKKPKIL
                     FLDEPTSALDLNHAIELLSLCERLIKQNNIAVVAILHDLNLASMFCDKVLFLKEGEIK
                     YFGSTKELFTKEILKEIYNLNCEIVYKDLKPYILALKEKI"
     gene            3801..4607
                     /locus_tag="ACJE1S_001743"
     CDS             3801..4607
                     /locus_tag="ACJE1S_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HGG0807264.1"
                     /translation="MKKILIIMSLFLTLLNAKERIVVLDPASIETLFMLNAQDQIVGI
                     ANLQHSNIYPEEKTSKITSVGTFSHPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAQRLDEIKSNIQILAKLTDKEEQGKKLLEEFEQGLQELQKNPLNKSGIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSEIARPIISAEYILKQNPDLLILGINADGNI
                     LNANALLKNTKAAQMGQIYHNENTHILLRLSPKIIDRIKEFKTRLENQNF"
     gene            complement(4604..5461)
                     /locus_tag="ACJE1S_001744"
     CDS             complement(4604..5461)
                     /locus_tag="ACJE1S_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HGG0807265.1"
                     /translation="MKFKKLYIELSDICGLKCDFCPSKKALRGVMSVENFSKLARQIW
                     DKSEIFTFHLLGDPLLLNNLEEYLQIAKNHQMKLEITTSGFYFSPKNSKLLLKYDNIH
                     QINISLMAFLSQSKLSLEQYFKPILEFCKEHLEYKKSSFINLRLWNLDTNFKAPSENL
                     PIYEFLSKEFGVRILTHLAKNRLQRHILLHQNKLFKWPSLKDKPLYTQGKCHALKEQI
                     GILSDGTLVPCCLDTKGDISLGNVFNAEFKSLLESKRIQEIKKAFEENKRIEKLCQSC
                     EFFKTRLSD"
BASE COUNT         1930 a          848 c          898 g         1823 t
ORIGIN      
        1 ctaagcactg gtatcaatgc acaagaattg aatgataaag ccattcaaat gcaaaaagtt
       61 gttgtaagtg caacaggatt tgaacaagat gcagacaata acttgcgtaa tgtaattgtt
      121 atcgatggta aagacttaga aaaaagagga tttaatacct tagaacaagc cttagaaaga
      181 atttcaggca ttagttttgt aaattttgga ctaggacgca atatcgatat gcgtggacaa
      241 ggaagcaagt ccaatatagc tgtgaaagtt atggtaaatg gaaatgctat taatgtgctt
      301 gataattctc atggcgtaac tcctttagaa agtgtcaatt taaacaatat agaacgcata
      361 gaaatcatac cagggggagg ctctgtgctt tatggaagtg gcactagagg gggtgtgatt
      421 aatatcatta caaaaaaaga aaaatccgat gcttttgctc taagtcttaa aggcagtagt
      481 tacgatcatg gaaatttagg tggaaattta ggcgtttatg gggctaaaaa aatcaatgat
      541 tatctaacat ttggttttga tatacaaggc tttaaccgcg atggctatca agagggttat
      601 aatgaaaaag gctattttgt caatacaaaa gcctatctaa atactagcga taatagtgat
      661 ttatccctaa attataatta ttttgaaagc aaaaatacaa gcagtggcta tcttacaaaa
      721 gcacaaattc aaagtgatcc gacccaaaaa ggaagtggtg ataatatcac tcaaatcaat
      781 agacctgaaa ttgctttaga ttatcatcat tattttagtg atttatacga aattcaactc
      841 ggagcatttt ggcaaaatca aaaaataaga tatctaaaag atgaaattcc aatgatgggc
      901 accatagctt atcaaaccgg tagcggtttt gaagatacgc ttacgggtat aaatttaaaa
      961 aataaaatca attacaaaga tgattcttat tttatcttcg gctatgagtt tgcaaatcat
     1021 gatgccaaaa gaacaagcat agttcattat aatgtaaaca ctccagcatt tcaaatgagt
     1081 cataccatga caaccctaat ggatatggat aagcaaagcc attctgtttt tgctctagac
     1141 tctcatcaat ttaatgatat ttttagtatt tcaggtgggg caagatacga atacagtctt
     1201 tatgataccc atagaaatta cacaaacaaa atgataatat ttggtatgga gcaaccaagc
     1261 aatccagagc tttttgacgc tgatgataca agcaataact ttgcctttga aatcactcca
     1321 aatttcaaat attctgatac tggaaatata tatgctaaat acgaaagagg tttcatctct
     1381 ccaactcctg cacaacttgt taacaaagat caagcaactc aaaaatatta cactgccaat
     1441 ttagatcctg aaatttttga tactttcgaa cttgggatta atgatttttg gtgggatttt
     1501 tatggcttta atttgacttt attttacact ctaagcaagg atgaaatttc ttatcttgga
     1561 aatccacact ccacaggagg agcattttgg aaatattata atatcgacca aacgcgtcgt
     1621 ttaggagcgg aattaaacct tcatcaattt ttattcaatg atagcttaat cctcaaagaa
     1681 agcctaagct atcttgatgc tcaaatttct aaaggtgtta atgacggact tagaattcct
     1741 tatgtttcaa aaatcaaagc cacagccgga gtagaatacg cttggaataa aaatttatca
     1801 agctatatag atttaagcta tttttcaaga gcaaaagatg gcggggttgt tgatgaaaat
     1861 acaggaaaga tgtctagaaa ttcttggatt aaggattatt ttttaactga tattggtgta
     1921 aattataatt atagaaattt acaaattcta gcaggcattc gcaatctttt tgataagcaa
     1981 tattacactt atcaagacag cacaaatgat caatatctag ccggaaatgg tagaaattac
     2041 tatgttgaat ttaaatatgc gttctaaaaa tctagtgatt atagggcttt ttttagccta
     2101 tataatcacc tgtatcatcg cactttgctt aggagatgaa aatttaagcc ctaaagaact
     2161 tctctcctat gcttttggtg aaaatgaaat tttgcgtcaa atcatcatcg atgggcgttt
     2221 gcctcgtatt ataatggcta ttttaatcgg tatgctttta gctagcagtg gagcagtaac
     2281 gcaaaatgta ttttcaaacc ccatagcaga tccttatatc ataggtatag cttcagcagc
     2341 aacctttgga tctgttttag cgtatttgtt aaaactgcct gattattatt atggaatttt
     2401 aggctttatt tgttctgcta ttttttcatt agcgatcttt aaagtatctt caaaagcttc
     2461 catagctact ttactcatca taggcattgc tgcctcatct tttctaggag cttttacctc
     2521 gttttttacc tatcttatag gggaagattc ttttaaaata gttgcttggc ttatgggaaa
     2581 tataggttca gcttcttggt ttcgtatagg aattttgatt ttgcctttga ttttttgtct
     2641 tatgtatttt tacgcgcata aaaatgaatt aaatatcatt ttaagcgggg atgatgaggc
     2701 aagaaattta ggagttgatg cccaaaaatt aaaaatcaat cttttgatag tttcttcttt
     2761 ggcagtttct tttgcggtag cttttacagg actcatagcc tttgtaggac ttataatccc
     2821 tcataccgta agactcttgc ttagaaatta tgacaatgct ttggttattc ctttttgtac
     2881 cgcttttgga gggctttttt tactcatttg tgatactcta gcaaggactc taatagcccc
     2941 tgtgcaaatt cctatagggg ttttaaccgc attctttgga gctcctgtat ttttatattt
     3001 ggctttaagt gctaggagat ttttatgata ttaaagatac aaaatttaag ttttagctat
     3061 cataaaaaag aattgttaaa aaatatcaat ttagagcttc aaaataaagc ttttataggt
     3121 attttagggc ctaatggctc gggtaaaagc acacttttaa agcttatact aaaaaattta
     3181 aatataagta agggcgaaat atcgcttttt aataccaata taaaaaactt tgcccttaaa
     3241 gaatttgcac aactttgcgg ttttgtgcct caaaattcgg gtttaaacac gcccttaaaa
     3301 gttattgatg tgcttttaat gagcaaattt acaaatttaa aacatgcttt ttgtgattat
     3361 tctaaagaag atattttaga agttgaaaaa tttgcaaaaa ctttaaaatt ggaaaacttt
     3421 ttagaaagaa atatgctttc tttaagtggt ggagaatttc aaagagtgct tttagcaaga
     3481 gccttgctta aaaaacccaa aattcttttt ttagatgaac ccacttcagc acttgattta
     3541 aaccatgcta tcgagctttt aagcctttgc gaaagattga taaagcagaa caatatcgca
     3601 gttgtagcga ttttgcatga tttaaattta gcctctatgt tttgtgataa ggtattgttt
     3661 ttaaaagaag gagaaataaa gtattttgga agtacaaaag agctttttac caaagaaatt
     3721 ctaaaagaaa tttataattt aaattgcgag attgtctata aagacttaaa accttatatc
     3781 ttagccttaa aggaaaaaat atgaaaaaaa ttttaatcat tatgagttta tttttaaccc
     3841 tacttaatgc caaagaacgc attgtagtgc ttgatcctgc aagtatagaa acacttttta
     3901 tgctaaatgc acaagatcaa atcgtaggta ttgcaaattt gcaacactca aatatctacc
     3961 ctgaagaaaa aacttcaaaa ataactagcg taggaacttt ttcacaccct tctcttgaaa
     4021 aaatagttgc cctaaagcca agcttagtga tattaagctc gtattcttta aatttagaag
     4081 aagggcttaa aaactttgga atcaaaagta tcaatttaaa agcccaacgc cttgatgaaa
     4141 tcaaaagcaa tatccaaatt cttgcaaaac tcacagacaa agaagagcaa ggcaaaaaac
     4201 ttttagaaga atttgaacaa ggattacaag aattgcaaaa aaatccctta aataaaagcg
     4261 gaatttacct ttattctagt aatccactca tggcctttaa tgataattct ttaatagcgg
     4321 atatattaag actcataggc attaaaaacc taagtcctca aagtgaaata gcacgcccta
     4381 taatctcagc agaatacatc ctaaaacaaa atcctgattt gttgatctta ggcattaatg
     4441 cagatggcaa cattttaaat gctaatgctt tgttaaaaaa tacaaaggca gctcaaatgg
     4501 gacaaattta tcacaatgaa aacactcata tattgttacg cttaagccca aaaatcatag
     4561 atagaattaa agaatttaaa acaagattag aaaatcaaaa tttttaatcg ctcaatcttg
     4621 ttttaaaaaa ttcacagctt tgacaaagct tttctatacg cttattttct tcaaaggcct
     4681 ttttgatttc ttgaatgcgt ttggactcaa gaaggctctt aaattcagca ttaaaaacat
     4741 tacccaaaga tatatcgcct ttagtatcca aacaacaagg cacgagcgtg ccatcactta
     4801 aaatgcctat ttgctctttt aaagcatggc attttccttg agtataaagg ggcttatctt
     4861 ttaaacttgg ccatttaaaa agcttgtttt gatgaagcaa aatatgcctt tgaagacgat
     4921 ttttagccaa gtgtgtaaga attcgaaccc caaattcttt acttaaaaat tcataaatgg
     4981 gcaaattttc actaggggct ttaaagttag tatctaaatt ccaaagtcta agattgataa
     5041 agcttgattt tttatactct aaatgctctt tgcaaaactc taaaataggc ttaaaatatt
     5101 gctctaaaga aagtttgctt tgacttaaaa aggccattaa agagatattg atttgatgga
     5161 tattgtcgta ttttaataac aatttagaat ttttaggact aaaataaaaa ccacttgtgg
     5221 taatttctaa tttcatttga tgatttttag caatttgtag atattcttct aaattattta
     5281 aaagcaaagg atctcccaaa agatgaaagg taaaaatttc gcttttatcc caaatttgcc
     5341 ttgcaagttt ggaaaaattt tctacactca tcactccacg caaggctttt tttgagggac
     5401 aaaaatcaca ttttaaaccg caaatatcgc ttaattctat gtataatttt ttaaatttca
     5461 ttatgtatcc aagagtattt tttagcaata ttttaaaaa
//
LOCUS       DBBXOW010000092         5348 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.093, whole genome shotgun sequence.
ACCESSION   DBBXOW010000092 DBBXOW010000000
VERSION     DBBXOW010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.093"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            55..483
                     /gene="cgb"
                     /locus_tag="ACJE1S_001745"
     CDS             55..483
                     /gene="cgb"
                     /locus_tag="ACJE1S_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HGG0807266.1"
                     /translation="MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKVVLNADETTLKAWEESYKAIAQFYIDIEKEIYAKAK"
     gene            complement(507..980)
                     /locus_tag="ACJE1S_001746"
     CDS             complement(507..980)
                     /locus_tag="ACJE1S_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF336 domain-containing protein"
                     /protein_id="HGG0807267.1"
                     /translation="MKKLLILCVFLGVSLMAKSFELVKEPVLTTQMVEGILELAKKEA
                     RKNGFYVSITIVDKSGQILAVLRDDKAGVHTLNASYKKAYTATSQKRETAVIFKGVKD
                     GKIPEDIRYLDDKFSIMPGGVPIFIDGVVVGGIGVGGAHLDEDVKIAKAGIAFLK"
     gene            complement(990..2615)
                     /locus_tag="ACJE1S_001747"
     CDS             complement(990..2615)
                     /locus_tag="ACJE1S_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HGG0807268.1"
                     /translation="MPFILELLKQNKFKFISFLIFSFITSAVGVLTLVFINDYLLKNT
                     QNIPILYFIALLIVFFLSSTIVELGLSVFGQNFIFKMQRRVVKQILDTPLLKVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKDKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDVY
                     FDMADRILLAQNGQICELKGDIKELAKNAVEKF"
     gene            complement(2662..3969)
                     /locus_tag="ACJE1S_001748"
     CDS             complement(2662..3969)
                     /locus_tag="ACJE1S_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0807269.1"
                     /translation="MKKSKLGTKEFKILGLSSLGGTLEFYDFIIFVFFAEYIAKVFFP
                     KDMSEFWTLLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFTLA
                     FIPGYETLGFLAPFLLILIRIFQGIAIGGELPGAWVFVREHCKEDQKAFSLSCLNSAM
                     ALGILLGSMVFLLINAFFSTEEIAAYAWRIAFFVGGIFGIISIYLRRFLQETPIFKQM
                     QKERSLSAFPLKDLFKEKNIFKNMLASIFITWVLTGCVVVLILLMPKFMPSILGLSAI
                     EGSYLQVLGILGITLGGVFMGYLVDKLGLFKICIFFSLVFAFFSCLYFYALYDLKNLV
                     LTCILYTSVCFLGGINVFAPILMSEVFRAKIRFSGISFSYNIAYAIAGGVTPQLIFWL
                     NALATRGENPFLYGMSIYMIFLALLAICAVFLVKDKINFDNRS"
     gene            4291..4506
                     /locus_tag="ACJE1S_001749"
     CDS             4291..4506
                     /locus_tag="ACJE1S_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807270.1"
                     /translation="MIIVGILGLIISTAVLLTCGVFWVLFGIVFWGVILAFMLLDLSG
                     SYGMVALYILFIVLNLVLIYKIIRRKK"
     gene            4503..4937
                     /locus_tag="ACJE1S_001750"
     CDS             4503..4937
                     /locus_tag="ACJE1S_001750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807271.1"
                     /translation="MKKLALALGGIALGACGEKIYKGIKNTWDKLIFKDLITLRKVIK
                     QYEEIEQIYPSYLNDPKFLEFRKTHKYDAEAIHNIKDHLFSDLKKEKLIQIGATMEAF
                     IEYSDKYLQDDITALKISWRFCAIRLKFDSALLQLQDINKIV"
BASE COUNT         2093 a          864 c          694 g         1697 t
ORIGIN      
        1 tttttctcct ttttaagata taaaatatct cttttacaac aaaaaggaga aactatgaca
       61 aaagaacaaa ttcaaatcat caaagattgt gtgcctattt tgcaaaaaaa tggagaggat
      121 ttaaccaatg agttttataa aataatgttt aatgattatc ctgaggtaaa acctatgttt
      181 aatatggaaa aacaaatttc aggagaacaa ccaaaagctt tagcaatggc gattttaatg
      241 gcggctaaaa atatagaaaa tttggaaaat atgagaagct ttgttgataa agttgccata
      301 actcatgtta atttaggagt taaagaagag cattatccta tagttggagc ttgcctttta
      361 aaagctatca aagtagtatt aaatgcagat gaaaccacac taaaagcttg ggaagaatct
      421 tacaaagcta tcgcacaatt ttacatagac attgaaaaag aaatttatgc aaaagctaag
      481 taatcatagg ctttgatgtt caaagcctat tttaaaaatg ctatccctgc tttagctatt
      541 tttacatcct catctaagtg tgctccaccc acacctatac caccaacaac aactccatct
      601 ataaaaatcg gcaccccacc aggcataatg gaaaacttat catctaaata acgaatatct
      661 tcaggtattt taccatcttt tacaccttta aaaataaccg ctgtttctct tttttgtgaa
      721 gtggccgtat aagctttttt ataactagca ttaagtgtat gcacgcccgc cttatcatct
      781 cttaaaactg ctaaaatttg gccagattta tctactatag taatacttac ataaaagcca
      841 ttttttcttg cttctttctt tgcaagctcc aaaatccctt caaccatttg tgtagttaac
      901 acaggctctt ttacaagctc aaaagatttt gccattaaac ttactcctaa aaatacacat
      961 aaaatgagta attttttcat ttttttcctt taaaattttt ctaccgcatt ttttgctagt
     1021 tcttttatat cgccttttaa ttcacaaatt tgaccatttt gtgcaagtaa aattctatca
     1081 gccatatcaa aatacacatc atcatgtgtg atagcaaaga ttgttttacc ttgctctttt
     1141 agcaaaggta aaagtttttt ataaaaaaat cttctaaaaa caggatcttg atcagccgcc
     1201 cattcatcaa gcactaaaat atccctttct tcaagcaagg ctataagcat agctaaacgc
     1261 tttttttgcc ctgtagaaag tttggttaag gtcagttcat tatctttgac acttgtttta
     1321 tctttaagtt ctaaaaactc caaccaaaaa gcaatttttt cttcgcttgc aaaattttct
     1381 ttatttaagg ttttagtaaa aagatgaaaa tcgctaaaaa cagcagaaat aagagatcta
     1441 tactcatcta aatttttatc atctataagc gtatcatcaa cataaattcc gcctttgctt
     1501 ggcttaaaaa gtcctgtcaa aagcatacaa aaagtggatt taccacttcc atttttacct
     1561 attaaaaata ccaattcacc ttttttaagc tctatattta caggatttaa atgaaaattt
     1621 tcttcataag caaattgagt atttctaaaa gaaatttttt tccattcact gatataatgt
     1681 gtttttttaa aaccttctat ataatcatct aattccaatt ttgcgatctt atccaaagcg
     1741 atttttgcca aaagcaaagt aggaaaagat cctatcatag atactaaagg ggttcgtaaa
     1801 aacaaaatag aaagagctat agttgtagca tctgcaacac ttgcccattc aaattttaaa
     1861 gctaagtaaa actctacacc cactaaagcc aaaagagtta catttgtcca gttgtttgag
     1921 agattgttaa aaagattacc taaagtacta tttttctttt tcaatcttgc attattttca
     1981 aattcatctt cataataaag cttggctcta tcacgattga tcaaaagttc tttatgtcca
     2041 tctagtatat tttggtaatt attttgcaaa gcatcatcat tttcccttgc ctttctaaaa
     2101 tactgatata ctttcatcat caaaaaatta ttagtaataa aaataaccat aatccatacc
     2161 acacacaaag caaaaatttg tggtgaaaga taacataaat aaacactagt gcataaaatc
     2221 aatatacttg attgtaaaaa atcaggcaat cttaaaagcc caaaagatat atttctcaca
     2281 tcacttccca aagaagctag aattcttgcc ttgcccactt ttgcaacttt taacaaagga
     2341 gtatctaaga tctgttttac cacgcgtctt tgcatcttaa aaatgaaatt ttgaccaaaa
     2401 acacttaatc ctaactctac tatggtagag ctaagaaaaa atactataag caaagcgata
     2461 aagtataaaa taggaatatt ttgtgtattt ttaagtaaat aatcattgat aaagactagg
     2521 gttaaaaccc ctacagcgct tgtaataaaa gaaaaaatca aaaaagagat gaatttaaat
     2581 ttattttgtt taagcaattc taaaataaaa ggcattgata aaaactccga aagtataatt
     2641 aaaaaaatta attatagcat tttaagagcg attatcaaaa tttattttat cctttacaag
     2701 aaaaacagca caaatagcca ataaagctag aaaaatcata tatatactca ttccatataa
     2761 aaatggattt tcgcctctag tagcaagagc attgagccaa aaaataagct gaggagtaac
     2821 ccctcctgcg atagcataag cgatattata cgaaaaggaa attcctgaaa atcttatttt
     2881 agctctaaaa acttcactca ttaaaatagg agcaaagaca ttaatcccac ctaaaaaaca
     2941 aacacttgta tataaaatac aggttaagac aagattttta agatcatata aagcataaaa
     3001 atacaagcaa gaaaaaaatg caaaaactaa agaaaagaaa atgcaaattt taaacaaacc
     3061 taatttatcc acaagatagc ccataaacac tccacctagt gttataccta aaattcctaa
     3121 aacttgtaaa taacttcctt caatcgcact caaacccaaa atacttggca taaatttagg
     3181 catcagtaag ataagcacta caacacaacc tgttaaaacc caagttataa agatagatgc
     3241 gagcatattt ttgaaaatat ttttttcttt aaacaaatcc ttaagtggaa aagcactcaa
     3301 actccgttct ttttgcattt gtttaaaaat aggagtttct tgtaaaaatc tacgcaaata
     3361 aatagaaata atcccaaaaa ttccacccac aaaaaaagcg atacgccatg cataagctgc
     3421 gatttcttcg gtgctaaaaa aagcattgat cagtaaaaat accatacttc ctagtaaaat
     3481 tcccaaagcc atagccgaat ttaaacaact caaagaaaaa gccttttgat cttctttgca
     3541 atgttctctt acaaaaaccc aagcaccagg taattctccg cctatagcaa taccttgaaa
     3601 aattcttata agtataagta aaaacggtgc taagaaacca agagtttcat aaccaggtat
     3661 aaaagccaat gtaaaagtag gaagcaccat aagtaaaata cttaacataa acatattttt
     3721 acgcccaaat ttatcaccaa aatgcgccat cactatacca cctaaagggc gcgctaaata
     3781 acctgcagca aaagctccat aagtatttaa caaagtccaa aattcactca tatctttagg
     3841 aaaaaatact tttgcgatat attcagcaaa aaatacaaag atgataaaat cataaaattc
     3901 taaagttcca cctagcgacg aaagtcctaa aattttaaat tcttttgtac ctagttttga
     3961 ttttttcatt attttatacc ttaaagaatt ttaaaaataa ccattatact acaaatattt
     4021 ataaaacaaa caatcctttt caatttaatt taactcattt tgatgataaa aatcataaaa
     4081 atcagcttaa gcaaaatttt taataatttt tcaaaaaaaa aaaaaacgac acaagctgtc
     4141 ataagaatac tttatacttt tttttgaaat taaaatcaag gaaaaaaaat gcaaacccga
     4201 gctttaaaaa ccccaaatac tttttacaag acaaaaaact atatttttat ctatagtaaa
     4261 aaataacaat attttagcaa ggtaaaaatg atgattattg tagggatttt aggacttatc
     4321 attagtacag cggttttgtt aacttgtgga gtattttggg ttttatttgg gattgtgttt
     4381 tggggagtga ttttagcttt tatgcttttg gatttaagtg gaagttatgg tatggtggca
     4441 ctttatatac tttttatagt gcttaattta gttttaattt acaaaatcat aaggagaaag
     4501 aaatgaaaaa attagcttta gctttaggtg gaatcgcact aggtgcttgt ggtgaaaaaa
     4561 tctataaagg cattaaaaat acttgggata aattgatttt taaagatctc atcacactta
     4621 gaaaagtcat caagcaatac gaagaaatag agcaaattta tcctagctat ttaaacgatc
     4681 ctaaattttt agaatttaga aaaacccaca aatacgatgc agaagctatt cataatataa
     4741 aagatcattt atttagcgat ctaaaaaaag aaaagcttat tcaaataggc gctacaatgg
     4801 aagcttttat agaatatagc gataaatatc ttcaagatga tataacggca ttaaaaatca
     4861 gctggagatt ttgcgctata agattaaaat ttgatagtgc tttgttgcag ttgcaagata
     4921 taaacaagat agtataaaga gttaaaatgc aagaaaattt aaaagaaatt tacaaagaat
     4981 ttgaatttta aatactcaat tttcaagcta ttttaatgat gaagaatttg taaattttaa
     5041 aaaaggtttt gaagcaaaaa atgctttaaa ttaccgtgat tttaaagaat ttagactaga
     5101 agaaacagat aaagaaaggc ttaaagatat acaaatttgc ttattggctt atatcaactt
     5161 ttgtagcagt aaagatataa aagaaaaaag agtagagatg atttctaaaa cctttatgcc
     5221 tatgtttctt atttctaggt tgtattttac tttaaaagaa gaaaaactag atatacaaat
     5281 tcgcaaaata cttaaggaaa aagacgagtt ggcagaggaa aaatctttat ggatttccaa
     5341 agtcctac
//
LOCUS       DBBXOW010000093         5342 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.094, whole genome shotgun sequence.
ACCESSION   DBBXOW010000093 DBBXOW010000000
VERSION     DBBXOW010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5342
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.094"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            26..991
                     /locus_tag="ACJE1S_001751"
     CDS             26..991
                     /locus_tag="ACJE1S_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bug family tripartite tricarboxylate transporter
                     substrate binding protein"
                     /protein_id="HGG0807272.1"
                     /translation="MKLKIFCSVLIFGFSLTFAKEPNRPECIAPAQPGGGFDLTCKLI
                     QVGMLKANIISTPMRVTYMPGGVGVVAYNTMVNNRSKDGNVVVAFSSGTLLNIATGKH
                     GKYNENNVKWLASAGVDYGMIAVKSDSPYKNLEDLINALHKDPNSISIGAGGSIGGQD
                     WMQTALLAKTINIDVKKIRYVAFEGGGDALTSLLGNHIDVISAGIAELVPQIETGTIR
                     VLAIFSPKRLPGTLANIPTAKELGYEVEWPVIRAYYMGAKVSDEAYNWWLDAFDKFQQ
                     TQEYKDQLKQRSLFEFDKKGKELEDFVKKQTDQYRILAKEFDLIK"
     gene            996..1439
                     /locus_tag="ACJE1S_001752"
     CDS             996..1439
                     /locus_tag="ACJE1S_001752"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HGG0807273.1"
                     /translation="MSSIRIVAGILLVISLIGIYIGWNIHSDFNYEPLGPRPFPVGTL
                     ILIALCSIFLVFFSEDTKVKWGDFILWKKLIVLTLAFLIYALFFEFLGFIICTIFLIF
                     TITLLFGATLIKAIVFSISSSIILYYLFNTLLQITLPFGFIFDNF"
     gene            1453..2946
                     /locus_tag="ACJE1S_001753"
     CDS             1453..2946
                     /locus_tag="ACJE1S_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HGG0807274.1"
                     /translation="MDTWMYLMQGFSIALDPYNILIALIGCFIGTIVGMLPGLGPING
                     VAILLPLAFAMNLPAESAIILLATVYMGCEYGGRISSILLGIPGDAAAIMTTLDGHPL
                     AKKGQAGKALSISALSSFIGSFIAICGIILFAPLIAQWSLKFGPAEYFALIVFGLATL
                     GSMLAQKPIRSFLSALIGLFLTTIGIDGNTGVYRFTFDSPHLYDGISFVVLVMGLFSV
                     SEIFLMLEHTQTSQNIINKTGKILVNIKEFFFCFWTIIRSSIIGFFVGVLPGAGATIA
                     SAITYMSEKKIAGEKGKFGQGDLKGVAAPEAANNASACGSFIPMLTLGLPGSGTTAVM
                     MGALTLYNITPGPTMFTDQVNIVWGLIASLLFANVILLLMNLPLVGIFVKILSIPMWS
                     LAPIIAIVSIIGVYSINSTDFDIILILIIGILGYFLRKLEFPMAPLILGFVLGEQLET
                     NLRRALSISNGDFSILWSGIIAQSLLIGAVLIILIPLLIKKLRKSKF"
     gene            complement(2943..3650)
                     /gene="ubiE"
                     /locus_tag="ACJE1S_001754"
     CDS             complement(2943..3650)
                     /gene="ubiE"
                     /locus_tag="ACJE1S_001754"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HGG0807275.1"
                     /translation="MQKQDKIIKMFNEIAPTYDKANRILSFGVDVSWRKFACKRVLKL
                     YQKDNLNIVDVACGTGDMIEIWQESAKKLNKNIAHIKGIDPSEGMLNIAKQKFPNIEF
                     IEAGAQELPLQSESVDIVSISYGIRNVVERKKALREFSRVLKQDGIFVVLEFTKREKG
                     GFVASCRDFYLKNILPSLGGMISKNKSAYEYLPNSIEGFLSKEEFIAELKQVGFEMLE
                     FKSFSFGVSSMFIAKKV"
     gene            complement(3650..4852)
                     /locus_tag="ACJE1S_001755"
     CDS             complement(3650..4852)
                     /locus_tag="ACJE1S_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807276.1"
                     /translation="MVHEIQKTFLLPDATLLEKLQKDGIVFEIYEIETFYTKITYFYD
                     VKFQNLNGNFYKITRLNNPILEQNQEEKISKKDYEKARKKLIEKSIKKKRYEFKLCSF
                     KSLIDVYEDFNLYVLKVFFPTLEMANLFTPPKEFRIQRELCGVLDSKNIILYGFNNLE
                     IDIEKCFKIIEKNQNFTLDFPSSILAFDGYRIFLFYLFRKLKLYWNLALENRQREVFC
                     EFFSYARKIYIILMSTEEIFDEELNKNLALRFEDLVKQSYCILANNELDENLLLFLGS
                     EDLQNLLSDFDFFIKEDSFYKSEQEKYFFKQMIAMQLRKRLVLFKKNLLKNFEIETFE
                     ENFLGLSVFLEYFHNLYNLKILSKLYNKYFICDLEKKTLLKLTKKKEKLGKLIHKASK
                     KLKIYKGY"
     gene            complement(4898..5308)
                     /gene="perR"
                     /locus_tag="ACJE1S_001756"
     CDS             complement(4898..5308)
                     /gene="perR"
                     /locus_tag="ACJE1S_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HGG0807277.1"
                     /translation="MELLQILKKHELKATPQRLCVLKILKRHEHPNIEELYEEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVANQKTCYDIYEERHIHIICNKCGNIEDMSFQD
                     AELDEYQEKLEKKMGNIIDHLAVCAHVSTCKKCH"
BASE COUNT         1704 a          837 c          780 g         2021 t
ORIGIN      
        1 aacttaaaaa ttaaaggatt ttatcatgaa attaaaaatt ttttgttctg ttttgatttt
       61 tggtttttcg ttaacttttg ctaaagaacc taaccgtccc gagtgtattg ccccagctca
      121 acctggaggc ggttttgatc taacatgtaa gctaattcaa gtaggtatgc ttaaagctaa
      181 cattatttca actcctatga gagttaccta tatgcccgga ggagtaggtg ttgtagctta
      241 taacactatg gttaataata gatctaaaga tggtaatgtt gttgtagctt tttcaagtgg
      301 gacattactg aatatagcca caggaaaaca tggaaaatat aatgaaaata atgtcaaatg
      361 gcttgcttca gcgggtgtag attacggaat gatagccgtc aaatcagact ctccttataa
      421 aaatttagaa gatctaataa atgccttgca taaagaccca aattctatta gtataggtgc
      481 gggaggttca ataggaggac aagactggat gcaaacagca ttacttgcaa aaactattaa
      541 tatcgatgta aaaaagatac gctatgtggc ttttgaagga ggaggagatg ctttaacttc
      601 tcttttagga aatcatattg atgtgattag cgcaggcata gctgaacttg tacctcaaat
      661 cgaaacagga actattagag tattggctat cttttcccca aagagacttc cgggcacttt
      721 agcaaatatt ccaaccgcta aagaattggg ctatgaggta gaatggccag taattagagc
      781 ttactatatg ggggcaaaag tttcagacga agcttataat tggtggcttg atgcatttga
      841 taaatttcaa caaacccaag aatataaaga tcaattaaaa caaagatctc tatttgaatt
      901 cgataaaaaa ggtaaagagt tagaagattt tgtcaaaaaa caaactgatc aatacagaat
      961 tttagccaaa gaattcgatc ttataaagta aaatcatgtc aagtataaga attgtcgctg
     1021 gaattttatt ggttataagt ttaattggaa tttacatagg gtggaatata cattcagatt
     1081 ttaattatga gcccttagga ccgcgtcctt ttccagtagg tactttaatt ttaatcgccc
     1141 tttgttctat atttcttgtt tttttctctg aagatactaa ggttaaatgg ggtgatttta
     1201 ttctttggaa aaagctcatc gttttaactt tagctttttt aatttatgcg cttttttttg
     1261 agtttttagg ctttataatt tgcacaatct ttttaatttt tacaataact ttactttttg
     1321 gggcaacttt aattaaagct attgtttttt ctatctcaag tagtattatt ttatactatc
     1381 tctttaatac tttattgcaa attactttgc cgtttggttt tatatttgat aatttttaat
     1441 taaaggaaat ttatggatac ttggatgtat ttaatgcaag gatttagcat agccttagat
     1501 ccttataata ttcttatagc cttaatcggt tgttttatag gtactattgt aggtatgctt
     1561 ccaggacttg gacccattaa tggagtagcc attttacttc ctctagcttt tgcaatgaat
     1621 ttacctgcag aatccgcaat tattttactt gcaacggttt atatgggttg tgaatatgga
     1681 ggtagaattt cttccatact acttggaata cccggagatg cagcagctat tatgacaacc
     1741 ttagatggac atcctttggc taaaaaaggt caagcaggaa aagctcttag catctcagct
     1801 cttagttctt ttattggttc atttatagca atttgcggta ttatactttt tgctccactt
     1861 attgcacaat ggtcgttaaa atttggtcct gctgaatatt ttgctcttat tgtctttggt
     1921 ttagcaactt taggaagtat gttagcccaa aaacctataa gatcttttct atcagctttg
     1981 ataggacttt ttttaaccac tataggtata gatggaaata caggtgttta tcgctttact
     2041 tttgatagtc cacatttata tgatggaatt tcttttgttg ttttagtaat gggacttttt
     2101 tctgttagtg aaatttttct aatgttagag catactcaaa caagtcaaaa catcatcaat
     2161 aaaacaggta agattttggt aaatatcaaa gaattcttct tttgcttttg gaccattata
     2221 agatcctcta ttataggatt ttttgtagga gttttaccgg gtgctggagc aactatagct
     2281 agcgccatta cttatatgag tgagaaaaaa atagccggtg aaaagggtaa attcggccaa
     2341 ggagatttaa aaggtgtggc agcccctgaa gcagctaata atgcttcagc ctgtggttct
     2401 tttatcccaa tgttaacact tggtcttcca ggttcaggaa caactgcggt tatgatgggc
     2461 gcattaacac tttataatat tactccaggt cctacaatgt ttactgatca agtaaatata
     2521 gtgtggggac ttatagcttc cttgttattt gcaaatgtaa ttttactttt aatgaatttg
     2581 cccttggtag gaattttcgt aaaaatttta agcataccta tgtggagctt ggctccaatt
     2641 atagcaattg tttcaattat aggtgtttat tctatcaata gtactgattt tgatatcatt
     2701 ttaatcttaa ttattggtat tttaggctat tttttaagaa aacttgaatt tccaatggct
     2761 ccacttatac tcggttttgt attaggagaa caattagaaa ccaatctaag aagagcttta
     2821 tctatcagca atggagattt ttcaatactt tggagtggga tcatagctca aagtttactg
     2881 ataggagctg tgctaattat actaataccc cttttaataa aaaagctaag aaagtctaaa
     2941 ttttagactt tcttagctat aaacatagaa cttacgccga aactaaaact tttaaattca
     3001 agcatttcaa aacctacctg tttaagttcg gcgataaatt cctctttact taaaaaacct
     3061 tctatagaat taggcaagta ttcgtatgca cttttatttt tgcttatcat tcctcccaag
     3121 cttggtaaaa tatttttaag ataaaaatcc ctacaagagg ctacaaaacc tcctttttct
     3181 cttttagtaa attctaaaac tacaaaaatt ccatcttgtt taagcactct tgaaaattct
     3241 ctcaaggctt tttttctctc cactacattg cgtatcccat agcttatact tacgatatca
     3301 acactttcac tttgcaaagg caattcttgc gctccagctt ctataaattc gatatttggg
     3361 aatttttgtt ttgctatatt taacataccc tcacttggat caataccttt gatgtgggct
     3421 atatttttat ttaatttttt cgcactttct tgccaaattt ctatcatatc tcctgtgcca
     3481 caagccacgt caactatgtt taaattatcc ttttggtaaa gctttaaaac tcttttacaa
     3541 gcaaatttac gccaacttac atcaacacca aaactcaaaa ttctattagc cttatcatag
     3601 gtcggagcta tttcattaaa catttttatg attttatctt gcttttgcat taatatcctt
     3661 tataaatttt caatttctta cttgctttat ggattaattt tccaagtttt tcttttttct
     3721 tggttaattt taaaagcgtc tttttttcaa gatcgcaaat aaaatattta ttatatagtt
     3781 tgctcaaaat tttcaaatta tataaattat gaaaatattc taaaaaaact gagagtccta
     3841 aaaaattttc ttcaaaagtt tcgatttcaa aatttttcaa taaatttttc ttaaacaata
     3901 caagtctttt tcttaactgc atggcaatca tttgcttaaa aaaatatttt tcttgctcgc
     3961 tcttatagaa tgaatcttct ttgataaaaa aatcaaaatc actcaataaa ttttgtaaat
     4021 cttcactacc taaaaataaa agtaaatttt catctagctc attatttgcc aaaatacaat
     4081 aagattgctt taccaaatct tcaaatctaa gagctaaatt tttatttaac tcctcatcaa
     4141 aaatttcttc tgtactcatt aagataatgt aaatctttct cgcataagaa aaaaactcac
     4201 aaaaaacctc tctttgccgg ttttctaaag ctaaattcca atacaatttt aattttctaa
     4261 atagataaaa taaaaaaatt ctatatccat caaaagctaa aatagaactt ggaaaatcta
     4321 gagtaaaatt ttgatttttt tctataattt taaaacattt ttctatatct atttctaaat
     4381 tattaaaacc ataaagtatt atatttttag aatccaaaac cccgcaaagc tctctttgaa
     4441 ttctaaattc tttaggtggt gtgaaaagat ttgccatctc taaagtcgga aaaaaaacct
     4501 ttaaaacata caaattaaaa tcctcatata catcaataag gcttttaaaa gaacaaagtt
     4561 taaattcata gcgttttttc ttgatgcttt tttctatgag ttttttacga gctttttcat
     4621 aatccttttt agaaatcttt tcttcttgat tttgctctaa aatcgggtta tttaatcggg
     4681 ttattttata aaaatttcca tttaaatttt gaaattttac atcataaaaa tatgttatct
     4741 tagtatagaa tgtttcaatt tcataaattt caaaaacaat tccatctttt tgtaattttt
     4801 ctaaaagagt agcatcagga agtaaaaaag tcttctgaat ttcatgaacc attaaaataa
     4861 cccttaaatt ctttgggtta ttttaacttt attttgctta atggcacttt ttacaagtgc
     4921 taacatgagc acaaactgct aaatgatcga tgatatttcc catttttttc tctaattttt
     4981 cttgatattc atcaagttca gcatcttgaa aactcatatc ttcgatattg ccacatttgt
     5041 tgcaaattat atgtatatgt ctttcttcat agatatcata acaagttttt tgatttgcta
     5101 cattgatttc tacaactaag ccttgttctt gtaaagtgtt aagattttta taaactgtag
     5161 caagagaaat ggaagggtat tcttttttga tttcctcata aagctcttcg atatttggat
     5221 gttcatgtct ttttaaaatt tttaaaacac acaatctttg tggggttgcc ttcaattcat
     5281 gttttttaag tatttgtaac aattccattc ttttatccta gttcttttta actaggaata
     5341 at
//
LOCUS       DBBXOW010000094         5201 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.095, whole genome shotgun sequence.
ACCESSION   DBBXOW010000094 DBBXOW010000000
VERSION     DBBXOW010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5201
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.095"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            72..169
                     /gene="ffs"
                     /locus_tag="ACJE1S_001757"
     ncRNA           72..169
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACJE1S_001757"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            317..2125
                     /locus_tag="ACJE1S_001758"
     CDS             317..2125
                     /locus_tag="ACJE1S_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HGG0807278.1"
                     /translation="MEKKKIPMLILCVLIALAFWIIPTPIGLEENSWHFLGLFIAVIM
                     AVILQVMPLGAVCMIAIAIVALSGITTTQSSVRATHIKTLEAIVLKDNSNIYKVTMEQ
                     KSQASILENLIKANVAKNLEPKVNEILKSNSNIEYQIDSLNKLYAKATSKVAAQKLID
                     ESKIAALNSLALEFMSQKDIDEKVNTAISSLKSKTGIKDALSGFSNSLIWLIVVSIIV
                     ARGVIKTGLGERLAYYFISIFGKKTLGIAYSIAFCETILAPVTPSNTARAGAIINPIV
                     QAISRSFKSTPEDGTQNKIGTYLSLVNFQANPISSAMFITATAPNPLVVDLVAQATNL
                     EVHLTWGQWALGMFLPGIAAMLLMPLAIYFLSPPEIKSTPNAKIFAKGKLEELGDMKG
                     SEKIMLGVFVLLLLLWAGALGFLFGISLDATSVALLGLSLVLVSGVLTFGEVLAEKAA
                     WNTLVWFSALVMMATLLGKLGVTQFLAEALGEFASAMGLGEISIMIFLSLAFLYTHYF
                     FASTTAHISAMFFVFYSAGLALGAPPLLYAFIMIASGNVMMALTHYATGTAPVIFGTG
                     YVSLKKWWSVGFVISVIDITVMILVGLVWWKFLGFY"
     gene            complement(2160..3176)
                     /gene="mnmA"
                     /locus_tag="ACJE1S_001759"
     CDS             complement(2160..3176)
                     /gene="mnmA"
                     /locus_tag="ACJE1S_001759"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HGG0807279.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKINEFKLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVIISDDKSASISLKESVYGLASGQMAVFYDGDKVIAS
                     GFIE"
     gene            complement(3176..3781)
                     /locus_tag="ACJE1S_001760"
     CDS             complement(3176..3781)
                     /locus_tag="ACJE1S_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HGG0807280.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDSFYYQEAKKLA
                     SLCVENGFCVVSGGGGGIMRAANAGAAKCKNDANFIKSVGFNILLPFEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGGEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            complement(3903..4691)
                     /locus_tag="ACJE1S_001761"
     CDS             complement(3903..4691)
                     /locus_tag="ACJE1S_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807281.1"
                     /translation="MINSLNSNLNYDYNTSNFKQDKNIDFKINKHGVAVITGEGALPY
                     RGKKFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSPLKDFNPAYTKWDP
                     TTEKMMLGFFVSYSKMFHLGYDIIKKADEFYKEFDALISKDLSLNEFKTKYIDFKQRH
                     DEFVKEYEMAMGDKMLLSSDDEIITQQSEKPFKAIQGESKNKETYKDDSTRNELVKKL
                     LEGKFSTSKELELLFGMKFSDDDAGEFNKILSLNSTPKSIDIKA"
     gene            complement(4705..5199)
                     /locus_tag="ACJE1S_001762"
     CDS             complement(4705..5199)
                     /locus_tag="ACJE1S_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807282.1"
                     /translation="MKEVKGGYITYLKRLSDNEVIAFAKPDWNLELTLFQDSNGDQYY
                     WNREGLVRFGGMCGIDTTNCLVNGKHTYTNQQRLWETMSIVGDDPYRNFLGYTVKRNI
                     GISNLGKRFVYFSYGVAVINEQSGSWYRVKSSPVLNNYRVVKEISSNYKDFLERYLGG
                     YSIK"
BASE COUNT         1561 a          887 c          803 g         1950 t
ORIGIN      
        1 tatacatttt tatatttagt ttttatagct caacactttt taagtatatt atgatataat
       61 ttctttgcct tttcttagac ctgtgcaatg ctatttttaa gcaccgcttc agggtgggaa
      121 cacagcagag cacttgattg tagtgtgtgc cgcagccatc tgggaaaggg tttatttcat
      181 ttaaacttac tttttatatc tcttaaatat ttttattttc atatagaatt tcaagacttt
      241 ggtaaaaatt ttttaatact taattaagaa ttgttaaatt aaaatttaac aaatttaata
      301 caataaagga gcttaaatgg agaaaaagaa aatccccatg cttatactgt gtgtccttat
      361 tgcgcttgca ttttggataa tccctactcc tataggttta gaggagaatt cttggcattt
      421 tcttggactt tttattgcgg tgattatggc ggttatctta caggtaatgc ctttaggagc
      481 tgtgtgtatg atagctattg ctattgtggc actaagtgga atcacgacca ctcaaagttc
      541 tgttcgtgct acacatatca aaactcttga agccattgtt ttaaaagata attctaatat
      601 ctataaagtt accatggaac aaaaatcaca agctagtatt ttggaaaatc tcatcaaagc
      661 aaatgtggct aaaaatttag aacctaaagt aaatgagatt ttaaaatcta attcaaacat
      721 agaatatcaa atagatagtc taaataaact ttatgcaaaa gcaacttcaa aagttgctgc
      781 gcaaaagctt attgatgaga gcaagatcgc ggcattaaac tctttagctc ttgaatttat
      841 gtcccaaaaa gatatagatg aaaaagttaa tactgcaata tcaagtttaa aatccaaaac
      901 aggtattaag gatgctttaa gcggattttc taattcttta atttggctta tagtagtttc
      961 tatcattgta gctcgtggag ttataaaaac aggacttgga gagcgtttgg cgtattattt
     1021 tatcagtatc tttggtaaga aaactttagg tattgcgtat tctatcgcat tttgcgaaac
     1081 catcttagct cctgtaaccc cttcaaatac agcaagagcg ggtgcgataa tcaatcctat
     1141 agttcaagct atctcaagaa gttttaaatc tactcctgaa gatggaacac aaaataaaat
     1201 aggcacctat ctttctttgg tgaattttca agccaatcct atttcttcgg caatgtttat
     1261 cacagccact gctccaaatc cattggttgt tgatttggtc gctcaagcta caaatttaga
     1321 agtgcattta acctgggggc aatgggcttt aggtatgttt ttacctggta tagcggctat
     1381 gcttttaatg cctttggcga tttattttct ttctccacca gagattaaat caaccccaaa
     1441 tgctaagatt tttgcaaagg gtaagttaga agaactgggt gatatgaagg gtagtgaaaa
     1501 gattatgcta ggtgtttttg tattgctttt gcttttatgg gcaggggctt tgggctttct
     1561 ttttggaatt tctcttgatg ctacaagtgt tgccttgctt ggtctttctt tggttttagt
     1621 aagtggagtt ttgacttttg gtgaggtgtt ggcagaaaaa gctgcttgga atactttggt
     1681 atggttttca gcccttgtga tgatggcaac tttacttgga aagctcggtg taacgcagtt
     1741 tttagctgaa gctttgggtg aatttgcctc tgctatggga cttggtgaaa tttctattat
     1801 gattttctta agccttgcct ttttatatac gcattatttc tttgcttcaa ccacagcgca
     1861 tatttcagct atgttttttg tattttatag tgcaggactt gctttagggg ctccaccact
     1921 tctttatgct tttattatga tagcatcagg aaatgttatg atggccttaa cgcattatgc
     1981 aacaggaaca gctccagtta tttttggaac aggttatgta agtcttaaaa aatggtggtc
     2041 tgtaggattt gttatttcag tgatagatat aaccgtaatg atacttgttg gccttgtatg
     2101 gtggaaattt ttgggatttt attaaaatct tatcaaagct tttaaagctt tgataagtct
     2161 tattctataa acccgcttgc aatgacttta tcaccatcgt aaaatactgc catttgccca
     2221 cttgctaaac cataaacact ctcttttaaa gaaatgcttg cgcttttatc atcacttata
     2281 atgactttac acggggtgga ttttgatcta tagcggattt ttacttcgca atcaagctct
     2341 tttgcatcga tgaaaagatt gatatttttg agtttaaatt cattgatttt taattcttct
     2401 ttggtgccaa cgatgatttg gttttgctta ggattgattt ttaaaacaaa atgcggctca
     2461 tgcgctccac gcacttcaaa gcctcttctt ttgcctatgg tatagtgcat atagccctca
     2521 tgtttgccta ctacttttcc gctactatct aatacttctc caggaatttt tgtatccata
     2581 aactgatcta aaacttgcac ataagtatct tcaacaaagc aaatttcaga actttccttt
     2641 tgggtggcaa aagattttaa aacctctata gtggaagcaa attttttcac atcttctttt
     2701 ttcatttcgc ccaatggaaa gatgaggtat tttaaagctt ctttatctgc actggccaaa
     2761 aaatagcttt gatccttgct ttcatctact gcggttttta ttaagttgtt ttcaagtctt
     2821 gcataatgcc ctgtggcaag tttttcacaa cctaaacttt tagcaaattc taaaagtttt
     2881 ccaagtttga taaaacggtt acataaagcg caaggatttg gtgttttacc ctctttataa
     2941 gtatccacaa aaggcatgta aactttgttt ttaaaatctt cttgtaagtc taaaatatga
     3001 taaggaattt gcaaaaagtt tgcaactttt tctacttttt tgatattttc ttcgtgataa
     3061 tttggtttgc catgaagttt catataacaa cctataactt catgacctaa atttttaagt
     3121 ttataagcag tgactgtact atcaactcca ccgctcatag cgactagaat tttcattaaa
     3181 tttcctttaa agtattaatt ataaaatcca agtcgtcagt gattttatac tttaactcat
     3241 ctcctttaga aatcacttca agtttgagta aagaatttct gacgaactca tcaaaacctc
     3301 gccaaaattc acccccaaac aaaataatag gaacatcttt tttaaattct aactgtttta
     3361 atgtaagaat ttcacacaat tcatcaagtg ttccaaagcc gcctgggaag atcacaaaag
     3421 ctagactctt ttcaataaga gccattttgc gtatggctaa gctctcaaaa gtaatattat
     3481 attctacaaa atcattaagt ttttgctcaa aaggcaaaag tatattaaaa cctaccgatt
     3541 ttataaaatt tgcatcgttt ttacatttag cagcgcctgc attagctgca cgcataatgc
     3601 ctccacctcc gccgctaacg acacaaaagc cattttctac acataaacta gctaattttt
     3661 tggcttcttg ataataaaaa ctatcttctt ttaatcttgc agaaccaaaa aaagttacgg
     3721 cattttttag gtttggtatg ttagcaaatt tttctaaatc ttggcttatt ttttcattca
     3781 tttttcaacc tttagttaaa ataaattcca ttctagctaa aaatttataa taagttcttt
     3841 attatataag ttttaatagg tttattttat taagattagg aatttaaaag acttttaaat
     3901 ccttaagctt taatatctat actttttggt gtagaattta aagaaaggat tttattaaat
     3961 tctcctgcat catcatcact aaatttcata ccaaaaagaa gttctaattc tttactagtg
     4021 ctaaatttac cttctaatag tttttttaca agttcgtttc ttgtgctatc atctttgtaa
     4081 gtttctttgt ttttactttc gccttgaatg gctttgaagg gtttttcact ttgttgagtg
     4141 ataatttcat catcactaga aagcaacatt ttatcaccca tagccatttc gtattctttc
     4201 acaaattcat cgtgtctttg cttaaaatct atgtatttag ttttaaactc atttaagctt
     4261 aaatctttac ttataagtgc gtcaaattct ttataaaatt catcggcttt tttgatgatg
     4321 tcgtagccca aatgaaacat cttagaataa gaaacaaaaa aacctaacat cattttctca
     4381 gtagttgggt cccattttgt ataagcagga ttaaaatctt ttaaagggga tttttctatt
     4441 ttattggggt cttttaaagc atttgacttc ataaagttgt taaattcttg catatctttt
     4501 ttgctaatac tttcatcaag tccgaatatt ttaggattat actcaaattt ttttccacga
     4561 taaggcaaag caccttctcc tgttataacg gctactccgt gtttgttgat tttaaaatca
     4621 atatttttat cttgtttaaa atttgaagtg ttataatcat agtttaaatt tgagtttaga
     4681 ctatttatca ttagtttttc ctctttactt gatagaatac ccaccaagat atctttctaa
     4741 aaagtcttta tagtttgaac tgatttcctt aactactctg taattattca aaacaggact
     4801 tgattttact ctataccaag aacctgattg ttcgttgatt acagccactc cataagaaaa
     4861 atacacaaat cttttcccta aattagaaat accaatattt cttttcacag tatatccaag
     4921 aaagttacga taagggtcat cgcccactat actcatagtt tcccaaagtc tttgttgatt
     4981 tgtgtatgta tgttttccat taactaagca atttgtggta tctataccgc acattccacc
     5041 aaatcgaaca agtccttctc tattccaata atattgatct ccgttactat cttgaaataa
     5101 agttaattcc aaattccaat caggtttggc aaaggctata acttcattat cactaagtcg
     5161 ttttaaatag gttatatacc caccctttac ttctttcatc t
//
LOCUS       DBBXOW010000095         5157 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.096, whole genome shotgun sequence.
ACCESSION   DBBXOW010000095 DBBXOW010000000
VERSION     DBBXOW010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5157
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.096"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..687
                     /locus_tag="ACJE1S_001763"
     CDS             <1..687
                     /locus_tag="ACJE1S_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG0807283.1"
                     /translation="SFEAAKKDVAKDYALAQLKNIANAKFLELKEGKDKFQKDENITD
                     SDVYYPLEALSRVKNGDVLRPSEYQNGYIIIKLNKTNPVRTKTFDEAKEELMPIYISE
                     QVKKNLEEKAKQNLENFSGTNIGFVSRDTVRNDAKISNILNEAEFSYFLMNVFNSDQN
                     RSYVILNEDKAMLYKINKQKLDMNPEKFQQYRIMLNQNLQSLKANEMKQELIEELKKT
                     YPIKIYYKGK"
     gene            684..2072
                     /gene="ftsA"
                     /locus_tag="ACJE1S_001764"
     CDS             684..2072
                     /gene="ftsA"
                     /locus_tag="ACJE1S_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HGG0807284.1"
                     /translation="MILNILGIDLGSTQTCAIVAQKDEEGLKIIGFAKAKTNGVKKGA
                     ITNIELASKSIEEAVRNAEMMSGVHYDKVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNALIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANSIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENYNRQIRQEIIPQKEVENETKSDFFGENLQENDTIIIQEQLDFKESKEKKPSV
                     FSNIWHKIMNQF"
     gene            2089..3201
                     /gene="ftsZ"
                     /locus_tag="ACJE1S_001765"
     CDS             2089..3201
                     /gene="ftsZ"
                     /locus_tag="ACJE1S_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HGG0807285.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISNSLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAENGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFKLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     IEISAAANNIEEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDRDSIAKKAAEEAE
                     TPKKNPYLNLRKVSGGFDEEIMAQIETPTFLRRQMD"
     gene            3524..4336
                     /locus_tag="ACJE1S_001766"
     CDS             3524..4336
                     /locus_tag="ACJE1S_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HGG0807286.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGVPQVSQGYTDFSLGSLKTTNNPLDLAIT
                     REDAFYLVQTKDGEIRLSKDGNFQLNEEGYLVNKQGYRILSSDYFNNPQNAGIRLPNG
                     AVYINVDKNGSIEVDGVQNARLFIAQVDDIRALQKDGDNVYRIDDLTRIRDLDNSNAV
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            4367..>5157
                     /gene="flgG"
                     /locus_tag="ACJE1S_001767"
     CDS             4367..>5157
                     /gene="flgG"
                     /locus_tag="ACJE1S_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HGG0807287.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKGRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGIGVRPTAVTKVFTEGNLKATSTDSLDMAIAGNG
                     FFQIQLPDGTIAYTRNGQFTKDNEGNIVNADGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIATQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
BASE COUNT         1862 a          691 c         1026 g         1578 t
ORIGIN      
        1 agttttgaag ctgctaaaaa ggatgttgct aaagattatg ctttagcaca gcttaaaaac
       61 atagctaatg ctaaattttt ggaattgaaa gaaggtaaag ataaattcca aaaggatgaa
      121 aatatcacag attcagatgt ttactatcca cttgaggctt tatctcgggt aaaaaatgga
      181 gatgtgttaa gaccgagtga atatcaaaat ggttatatta ttatcaagct taacaaaacc
      241 aatcctgtaa gaactaagac ttttgatgag gctaaagaag agcttatgcc tatttatatc
      301 agcgaacagg tgaaaaagaa tttagaagaa aaagctaagc aaaatttaga aaattttagc
      361 ggaactaata taggtttcgt aagcagggat actgtaagaa atgatgctaa aattagtaat
      421 atattaaatg aagcagaatt tagttatttt ctaatgaatg tttttaattc tgatcaaaat
      481 cgttcttatg ttattttaaa tgaagataag gctatgcttt ataaaattaa taagcaaaag
      541 cttgatatga atcctgaaaa atttcagcaa tatcgcataa tgcttaatca aaatttacaa
      601 agtttaaaag ctaatgaaat gaagcaggag ttaatcgaag agcttaaaaa aacatatcca
      661 ataaaaattt attataaagg taaataattt tgaatatatt aggaattgac ttaggttcaa
      721 cacaaacttg tgccattgtc gctcaaaaag atgaggaagg tttaaaaatt attggttttg
      781 caaaagcaaa aaccaatggt gtaaaaaaag gcgctattac caatatcgag cttgcttcaa
      841 aatcgatcga ggaagcagtt agaaatgcag agatgatgag cggtgttcat tatgataaag
      901 tagtggtttc tatttcgggc gcttatacta aaagtgttga tagtataggt gtagtaaata
      961 taccaaatca tgaaataggc atcaaagaaa ttcatcgtgc ggtaagcaca gccaaacaca
     1021 ctgcaaatct tccgagtggt tatgaaatta ttcatgtttt accttataat tttaaggtaa
     1081 atgatttaga acatgtagat gatcctttgg gtatgagcgg aaatcgcttg gaggtttcga
     1141 ctcatatagt tatttctcaa gaatctcata ttaaaaattt aaaaaaagct gttgagttgg
     1201 ctgatttaag agttgataat atagtccttt ctggctatgc ttcagctata gcttgtttag
     1261 atgatagtga aaaagaacta ggtgctgttt tgattgatat gggtggagcg atctgcgata
     1321 tggttgttca tactggaaat tcaattcgtt ataatgattg cttgcaaatt ggatcgatta
     1381 atattactca agatttatcg atggctttgc acactccttt aaaagaagct gagaaaatta
     1441 aattaaatta tgcagccctt tctcaacaac ctaatgcatt gatacaaatt ccttctatgg
     1501 gagatgaaag aaaagtaaat gaagtttctt tagatatcat ctcaaatgta atctatgcaa
     1561 gagctgaaga aactttaatg attttagcca aaattttaag cgacaatcgt tatgcaaata
     1621 gcataggggg tggcgttgta ttaacaggcg gaatgactaa attagcaggt attgatgaat
     1681 tagctcctgc aacttttgat aatcgttctg ttagacttgc tactgctaga aaagatttaa
     1741 ttactgggtt tagtgaaatt tttaatgatc ctgaaaatac ttgtgctata ggactttgtt
     1801 tatatggtgc gggttatttt acgccttatg aacttgattc aaatgaaaag ttaagatata
     1861 aaggggagat agaaaattat aaccgccaaa ttagacaaga aataattcca caaaaagaag
     1921 tggaaaatga aacaaaatct gatttttttg gcgaaaattt gcaagaaaat gatacaataa
     1981 taatacaaga acaattagat tttaaagagt caaaagagaa aaagcctagt gttttttcaa
     2041 atatttggca taaaataatg aatcaatttt aacaaggaga aagtttttat gagcgaattt
     2101 ttagtagaag agatgcaaca taataaaggc gctaaaatta aagttatagg ctgcggtggt
     2161 ggcggtggaa atatgattaa tcatatggtc aagatgggct taaatgacct cgatttaatc
     2221 gcggctaata ctgatgcaca agctatttca aattcattag caaaaaccaa aattcaactt
     2281 ggcgagaaaa aaacaaaagg cttgggtgcg ggcatgctac cagaggttgg agcagagagt
     2341 gctagagaaa gctttgaaga gattaaagct agtcttagcc aaagtgatat cgtttttatt
     2401 gcttcaggtt ttggtggtgg cacaggaacg ggtgctactc cagtaatcgc acaagcagct
     2461 aaagaaatag gtgctttaac tgtttctgtt gtaactatgc cttttgcttt tgaagggaaa
     2521 caaagaaaaa aacttgctga aaacggactc cttgaattga aaaaagaaag tgattctatc
     2581 cttgtaattc aaaacgaaaa gcttttaagc attatcgata aaaaagcagg aattaaagat
     2641 gcttttaaat tagttgatga tattttggcg cgtgctgtta agggtatggt gtctatactt
     2701 ttagacaatg gtgatatcaa tgttgacttt gctgatgtta gaaccataat gagccatcgt
     2761 ggtttagcgc ttatgggcgt aggcagtgct agcggtgaaa atgctatcga agaggctctt
     2821 tctaatgcca tagaatctcc attattagat ggtatggata ttaaaggagc taaaggggtt
     2881 attttacatt ttaaaacaag ttctaattgc tctttaattg aaatttctgc tgctgcaaat
     2941 aatatagaag aaattgttga tgaaaatgca aagattattt ttggttctac tacagatgat
     3001 agcatggaag atagggtaga agtgaccatt attgccacag gatttgaaga tagagacagc
     3061 atagctaaaa aagccgctga agaagctgaa actcctaaga aaaatcctta tttaaatctt
     3121 agaaaagtaa gtggtggttt tgatgaagag ataatggctc aaattgaaac tcctactttc
     3181 ttacgccgcc aaatggacta aaatagaata tttttaagca agatttttac ttaagtcttg
     3241 cttttttaaa atttttacta tttattttaa aatatttttt acccatattc ctagaaagaa
     3301 aactcttatt tcttgggtaa agagatgaat gttgctgctt tttaagcgat ttaatgatac
     3361 ttttgatttt ttagtataat tccttgtaaa aacacaatat gatgcaaatt atcattcagt
     3421 attttatttc tacttgctta atcccctaaa attcattctt tttaaaagtt ggaacactct
     3481 ttgctttata gattaaaaat atcaaaattt ataggtgaaa aatatgcaaa atggatatta
     3541 tcaagcaacg ggtgggatgg taactcagtt taataaactt gatgttatta caaacaatct
     3601 tgccaatatt aacacgagtg gttacaaaag agatgatgta gtaattgcag attttaaaag
     3661 gatttttaaa gaaactcagg atgagttgcc tatagaaaat cacacaagag atgcatcaag
     3721 atttgtcaat actaccatag atggcgttcc tcaagtctct caaggatata cagattttag
     3781 tttaggttct ttaaaaacga ctaataaccc tttggatttg gccattacta gagaggatgc
     3841 tttttattta gttcaaacaa aggatggtga aataagatta agtaaagatg gaaattttca
     3901 acttaacgaa gagggatatt tagtcaataa acaaggatat agaattttaa gcagtgatta
     3961 ttttaataat cctcaaaatg caggaattcg tcttcctaat ggtgcggttt atatcaatgt
     4021 agataaaaac ggaagtattg aggtagatgg cgttcaaaat gcgagattat ttatcgctca
     4081 agtagatgat ataagagctt tgcaaaaaga tggggataat gtttatagga tagatgattt
     4141 aacgcgtatt agagatttgg ataattctaa tgcagtgcgt caaggttttt ctcaaggctc
     4201 taatgtcaat ccggtaaccg aaatggtagg acttatagag gcaaatagaa tggtagaaat
     4261 gtatcaaaaa gttatgacag ctcatatgga tgacttaaac caagaagcta tcaataaact
     4321 tgcagccgtt aaataaaata atataaaata aattaaagga taaaaaatga tgagatcact
     4381 tcatactgct gctacgggaa tggtagcgca gcaaacacaa attgatgtta cttcaaacaa
     4441 tattgcaaat gttaacacag caggttttaa aaagggtcgt gctgaatttg ctgatctaat
     4501 gtatcaagtt atgaaatacg caggaacttc aacttcagcc acaacacttt ctccatcggg
     4561 catagaagtg ggtattggtg tgcgtccaac agcagtgaca aaggttttta ctgaaggtaa
     4621 tttaaaggct acaagcacag atagtcttga tatggcaatt gcgggaaatg gtttttttca
     4681 aattcaactt cctgatggca cgatagctta tacaagaaat ggacaattta caaaagataa
     4741 tgagggaaat atcgttaatg cagatggtta tagactttta cctgaaatga ctataccaga
     4801 gggtgcaact gcgattaatg tggctactga tggcacagtt tctgtaatgc ttccaggaga
     4861 acaacaagaa acacaaatcg gtcaagttga gcttgtacaa tttatcaacc cagctggact
     4921 tcattctatg ggagataatc tttatcttga aacaggggca agcggtgcac ctgtagcagg
     4981 tatagcaacc caagatggac ttggaacaat aagacatggc tttatagagt taagcaacgt
     5041 gcagcttgtt gaagagatga cagatcttat cacaggacaa agagcttacg aagcaggttc
     5101 aaaagctatc acgacgagtg atgatatgct tggaattgtc aatcaattaa aaagata
//
LOCUS       DBBXOW010000096         4948 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.097, whole genome shotgun sequence.
ACCESSION   DBBXOW010000096 DBBXOW010000000
VERSION     DBBXOW010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.097"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            10..702
                     /locus_tag="ACJE1S_001768"
     CDS             10..702
                     /locus_tag="ACJE1S_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HGG0807288.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINETINNQLGNLNSAKILLYSVN
                     FEEIANLQKNGEWEKAAQILGECAKKLELGGADFILIATNTMHKIFDQIQKNIKIPLI
                     HIAQSTAKILKQQNIHTIGLLGTQYTMMEDFYKNALKKENINTITPNQSDMQELSDII
                     FNELCKGQMKENSKEKYLKIIQKLKDEGAQGIVLGCTEIGLLISQEDTNIPIFDTALI
                     HALDAVNLALKD"
     gene            complement(699..899)
                     /locus_tag="ACJE1S_001769"
     CDS             complement(699..899)
                     /locus_tag="ACJE1S_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HGG0807289.1"
                     /translation="MGKLERIIRIILALVIFSVGVYYASWWALIGFIPLLTGIFGVCP
                     IRVWTGKQACPLGVCPISKKKD"
     gene            1030..1653
                     /locus_tag="ACJE1S_001770"
     CDS             1030..1653
                     /locus_tag="ACJE1S_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002839563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HGG0807290.1"
                     /translation="MDKEKILKEYFKNYNLENKDFEAMVEKSYFKEFDKNTILDDCLG
                     FVIVLKGGFRAFILGQNAKEITVFKLKQNEECVICSHCIFETISYNLTLESFEDTQIL
                     IVPVKIYSQLKDKYPLIANYTLNLIAKRFNSLINILEQALFTPLHHRVKMFLKENAKE
                     GKITFTHEEIALHLGSTREVISRILKTMQKEGFIQQNRKEITLLKDL"
     gene            complement(1853..2977)
                     /gene="cydB"
                     /locus_tag="ACJE1S_001771"
     CDS             complement(1853..2977)
                     /gene="cydB"
                     /locus_tag="ACJE1S_001771"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HGG0807291.1"
                     /translation="MFFGLELEGLQIYWWVILSLLGGLLVFMFFVQGGQTLIDELSSD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEVFLKINGYLGVFLIGVAISSFFSGSHFVLNEHNFVSWQ
                     NSLRGLELLFNPFNYLLGIALVFLSRILGAAYFMNNIKDENIKAKAVRKLSINSILFL
                     PFFLGFLAWIFIKEGFGVDEKGIVSMTENVYLYNFLDNILFAILFIVGVIFVLLGMVQ
                     GSKGCSKTIFTLGFGSVLAVFALFLSIGLGSSAFYPSLSDLQSSLTIRNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDRVKITREEMKDSEHLY"
     gene            complement(2977..4539)
                     /locus_tag="ACJE1S_001772"
     CDS             complement(2977..4539)
                     /locus_tag="ACJE1S_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HGG0807292.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFIIAIMETIYVK
                     TGNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKKFHLISTWCVAIGSNLSAFWILVANGWMQYPVGMQ
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFILKGRHIIEA
                     KKSLVVGASFGLVCSVFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIHGNEDRGIEPMQERID
                     KGKIAIQALKDYKLAKDNNDTAAMATHKSILEANFKDFGYGYLEKPTDAIPPVALTFY
                     SFHIMVALGSLFFLLFIATLYLTMANDIEKFRKILWLCLLCIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLMPVHIAATELGKVNVQISFWIFAVLFTALLIAEIKIMLTQIKKGFDAY
                     AGHSTLMGKGEK"
     gene            complement(4539..4769)
                     /locus_tag="ACJE1S_001773"
     CDS             complement(4539..4769)
                     /locus_tag="ACJE1S_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HGG0807293.1"
                     /translation="MYLKCFYFFFVRIFNFYKEGFKNLTLGKTLWKIIFIKLFIMLIV
                     LKLFVFDVNFNSIFKNDNEKSNFVIENLIKEK"
BASE COUNT         1968 a          900 c          637 g         1443 t
ORIGIN      
        1 gagatagaag tgaaaacgat aggcattata ggtggaatga gttttgaaag taccataacc
       61 tactataaaa ctataaacga aaccattaat aatcaactag gcaatttaaa ttctgcaaaa
      121 attttactct atagtgtcaa ttttgaagaa atagcaaatt tgcaaaaaaa tggcgagtgg
      181 gaaaaagctg cgcaaatttt aggagaatgt gctaaaaaat tagaacttgg tggagctgat
      241 tttatactta ttgccaccaa caccatgcat aaaatttttg atcaaattca aaaaaatata
      301 aaaattcctc tcattcatat tgctcaaagc acagccaaaa ttctaaagca acaaaacata
      361 cacaccatag gcttactagg cacccaatat actatgatgg aagattttta taaaaatgca
      421 ttaaaaaaag aaaatataaa tacaatcacc ccaaatcaaa gcgatatgca agaactaagc
      481 gacatcatct ttaatgaact ttgcaaagga caaatgaaag aaaattctaa agaaaaatac
      541 ttaaaaatca tccaaaaact aaaggatgaa ggtgctcaag gtatagtttt aggctgcaca
      601 gaaattggat tgttgatttc ccaagaagat acaaatatcc caattttcga tacagcctta
      661 attcacgccc ttgatgctgt aaatttagct ttaaaagatt aatctttctt tttagagata
      721 ggacaaactc ccaaaggaca agcttgcttt cctgtccaaa cccttatagg gcacacacca
      781 aaaatacctg taagcaaagg aataaatcct atcaaagccc accaagacgc ataataaacc
      841 cctacactaa agataaccaa tgctaggatt attcttatta ttctttctag tttacccatt
      901 tcttctcctt ttgtataatt taatcaaagt ataaacaaaa aaaattttct tgtcagtgat
      961 aaaagtcact aaaaaataat taatctaaaa aagatacaat aaaaattaaa ttcacaaagg
     1021 tagtctatct tggataagga aaaaatttta aaagaatatt ttaaaaacta taatcttgaa
     1081 aacaaagact ttgaagctat ggtggaaaaa tcatacttta aagaatttga caaaaataca
     1141 attttagatg attgtttagg atttgtgata gttttaaaag gaggatttcg tgcatttatt
     1201 ttaggtcaaa acgccaaaga aatcaccgtt tttaaactga aacaaaatga agaatgtgtc
     1261 atttgttctc attgtatctt tgaaactata tcttacaatc tcaccctaga aagctttgaa
     1321 gatactcaaa ttttaattgt tcctgtaaaa atatattctc aactaaaaga taaatatcct
     1381 ttaatagcaa actatactct taatcttatt gccaaacgct ttaattcttt gattaatatt
     1441 ttagagcaag ctcttttcac ccctcttcat catagggtta aaatgtttct taaagaaaac
     1501 gcaaaagaag gaaaaatcac ttttacacat gaagaaatag ccttacattt aggcagtact
     1561 agagaagtta tttcacgaat tttaaaaaca atgcaaaagg aaggttttat tcagcaaaat
     1621 cgtaaagaga ttacactttt gaaagattta tgataaaaat gcccatataa atatgggcaa
     1681 aattgcaata ttttgaaaag atttaatcct aaatcggtta aatctttaag aactttatag
     1741 cttattgtct ttttctaatt gattgatatt aagcatgata aatttatagc ttacataaat
     1801 caccaaaggc caaaccaata aaaacaaagc gtgtagcatt ttttctcctt gattaatata
     1861 aatgttcgct gtctttcatt tcttcacgag tgatttttac tctatccatt gcattccaaa
     1921 cataaataat ataagctaaa acaaaaggca caagcaaaga tacataagcc attacactaa
     1981 gagtataata actcgaactc gcattgcgta tagttaaaga actttgcaaa tcactaagtg
     2041 aaggataaaa agcgcttgat ccaagtccta tgcttaaaaa taaagcaaaa acagccaaaa
     2101 ccgatccaaa acctaaagta aaaatcgttt tagaacatcc ttttgaacct tgtaccatac
     2161 ccaaaagcac aaatataact ccaacgataa ataaaatagc aaaaagaata ttatctaaaa
     2221 aattgtataa atatacattt tcagtcatac tcacaatgcc cttttcgtcc actccaaaac
     2281 cctctttgat aaaaatccac gcaagaaatc ctaagaaaaa aggcaaaaat aaaatactgt
     2341 ttatactcag ttttctaacg gcttttgctt tgatattttc atctttgata ttattcataa
     2401 aataagcagc acccaaaatt ctagataaaa acaccaaagc aatacccaaa agataattaa
     2461 aaggattaaa caaaagttcc aaaccgcgta aagaattttg ccaagaaaca aaattatgct
     2521 catttaatac aaaatgcgat ccactaaaaa aactgcttat tgcaaccccg attaaaaaca
     2581 ctcctaaata accattgatt ttaagaaaaa cttcataggt tttagagcca taaacattat
     2641 tttctttttt acgatactca taagccacag cctgtaaaat aaaacaaaat aaaatacaaa
     2701 gccaagccca ataagctccg ccaaaacttg tactataaaa aagcggaaaa gcagcaaaag
     2761 cagcaccgcc aaaaagcaca agagtagtaa aaccaagctc ccatttacga cctagtgagt
     2821 ttacaagcat tgttttttca agttcgtcag aacttaattc atcaattaaa gtttgacccc
     2881 cttgaacaaa aaacataaaa accaaaagtc cgcctaataa acttaaaatc acccaccaat
     2941 aaatttgtaa cccctcaagt tctaaaccga aaaacattat ttttctcctt tacccataag
     3001 agtactatgt ccagcatacg catcaaaacc ttttttgatt tgagtaagca tgatcttaat
     3061 ctctgcaatc aaaagtgcag taaataaaac cgcaaaaatc cagaatgaaa tttgaacatt
     3121 gactttgcca agttcggttg ctgctatatg aacaggcatt aaatcttgta tagcccaagg
     3181 ttgcctacct acttcagcca ctatccatcc tgcctctgct gcgatatatc ctaaaggaat
     3241 acacaataaa caaagccaaa gaatttttct aaatttctca atatcatttg ccatagtaag
     3301 ataaagcgtt gcgataaaaa gtaagaaaaa taagcttcca agagctacca tgatatgaaa
     3361 actataaaaa gttaaagcca caggtgggat agcatctgtt ggtttttcta aataaccata
     3421 accaaaatct ttaaaatttg cctctaaaat acttttgtga gttgccatgg ctgctgtatc
     3481 gttattatct ttagctaatt tataatcttt taaagcctgt atagcgattt ttcctttatc
     3541 gatgcgttct tgcataggct ctatgcctct atcttcgttt ccgtgtatta aatcctcaat
     3601 gcctggcaca aaagaattag gatcacgatt tcctaatata gataaagcat aaggtatagt
     3661 aatatcaaat aaaaacacac tttcgttatt atctatagtt tttttaggat ttaaaattcc
     3721 aaaaggaaca agtcctgcac ggtgctcacc ttgataaacc ccttccatag ccgcaagttt
     3781 cataggttgc gtttgggtaa cacgataagc actctcatct ccgctaaaaa ataagaaaac
     3841 cgaacaaaca agcccaaaac tagcacccac aactaaactt ttcttagctt cgataatatg
     3901 acgccctttt aatataaacc aagccgaaat tcccatcaca aataaagcag aaatcacata
     3961 accactgcct atggtatgta aaaatttaga gatcgctaca ggagaaagtg caacttcaaa
     4021 aaagctttgc atttcatttc ttgctgtatc gggattaaat tgcattccca cagggtattg
     4081 catccagcca tttgcaacca aaatccaaaa tgctgataaa ttactgccta tagccacaca
     4141 ccaagttgaa ataagatgga atttcttaga aactttatcc cagccaaaaa acataacagc
     4201 aaaaaaagta gcctctaaga aaaaagccat tataccttca actgccaaag gagcaccaaa
     4261 aatatcaccc acaaaccagc tataatttgc ccagttggtt ccaaattcaa actccataat
     4321 aatgcccgta gctacgccga tagcaaaatt gatagcaaat aaagaaagcc agaatttagt
     4381 gatttttttc catctttcat tgcctgtttt tacataaatg gtttccataa tagcaatgat
     4441 aaaagataag cccaaagtca aaggcacaaa taaaaaatga taaagcgcgg ttaatgcaaa
     4501 ctgcgctctt gaccaatcca cactgctaag ttcgttcatt atttctcctt aataagattt
     4561 tctatgacaa aattactttt ttcattatca tttttaaaaa tagaattgaa atttacgtca
     4621 aaaacaaaaa gtttaagcac aataagcatt ataaaaagtt ttataaaaat aattttccat
     4681 aaagtttttc caagggtaag gtttttaaac ccttctttat aaaagttaaa aattcgcaca
     4741 aaaaagaaat aaaaacattt tagatacatt aaattaaacc ttataaaaat aatgaaaaat
     4801 ttaaattgga aaaaagcttg aaattataat gaaatttatg ttattaaatc cttaaaactt
     4861 gcttttataa ttgtcaaaac tttagccagt tttgactata aattctaaaa tttggtattt
     4921 aactaacaaa aatattctag aaaatgac
//
LOCUS       DBBXOW010000097         4809 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.098, whole genome shotgun sequence.
ACCESSION   DBBXOW010000097 DBBXOW010000000
VERSION     DBBXOW010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.098"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            124..1791
                     /locus_tag="ACJE1S_001774"
     CDS             124..1791
                     /locus_tag="ACJE1S_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HGG0807294.1"
                     /translation="MWQQIYDPFNSIWLSALFAFLPILCFLACLVFFKLKGYQAGFLT
                     VVLASVIALFVYDMPWNLVGASFVQGFTNGMWPIAWIIIAAIFLYKLSIKSGSFEIIK
                     KSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAAGLCLI
                     ANTAPVAFGAVGIPIIAMANLVGVEAHSVSAMVGRMLVPLSLTIPFFIVFLMDGLKGV
                     KETFPAILVAALSFTATQFWSSNHLGAELPDIISAIVSLAVTTIFLKFWKPKNIFRLD
                     GETHFSEDNTLNFGDVLKAWTPFILLIVCIIIWTQPWFKAIFDKDGFLSYTSISLQFS
                     NLTSGILSPSITGIGEAKPLSLGLGIDLINGKSVAQAGTAILLAAFLTIAILRIKAED
                     AAECFWATLKEMAIPCLTIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFAFFSPIIGW
                     IGVFLTGSDTSANLLFGTLQQVSAQKLGVSEALFLAANSVGGVVGKMISPQSIAIACA
                     AVGLVGKESDLFKFTLKYSIAFIILIGIWTCIIAFFLQGIIPEVVAK"
     gene            1944..2681
                     /locus_tag="ACJE1S_001775"
     CDS             1944..2681
                     /locus_tag="ACJE1S_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HGG0807295.1"
                     /translation="MKKVYFYATCLGTAAMQESVLNGIKLLRREGVEVIFKKNQTCCA
                     QPSFNSGYFNESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKDRPEFSRVK
                     DFSSRVIELSQYLDEVLNVNYEDKGEPIKVTWHSNCHALRVQKSIQASKNLIRKLKNV
                     ELVELQYEEECCGFGGTFSVKEPEISNAMVRNKIKDIQNTGVKYLISGDGGCLLNIDG
                     TMRRMGLDVKGIHLYEFLFKRLEGERL"
     gene            2678..4117
                     /locus_tag="ACJE1S_001776"
     CDS             2678..4117
                     /locus_tag="ACJE1S_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HGG0807296.1"
                     /translation="MSQKIPHEEIVHIKLNDIQMRENLMTAMHTLQKNRLGVIDARFR
                     DWQGLRAKAKQAKNNALMSLKDRLLEFEKNATKNGIQVHWASSDKDACEIVYEIMREK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGQIFKDKLGAKLENDEPESLNAIARDHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGVEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRTKMLAHKDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GENPPMGAKNIHHNAMEAFAFKQFKKAATKGERWRFALSKAHYFNWFVQNLSGALPVI
                     KKWYAFKELPQIKKDLYKEIQAIEGVIYE"
     gene            4110..4766
                     /locus_tag="ACJE1S_001777"
     CDS             4110..4766
                     /locus_tag="ACJE1S_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HGG0807297.1"
                     /translation="MSKINEISNKSKEKILSALNEAYEAKDFTYQASIDPVEHIQTKE
                     DALAEMKQKMSDNKYIVENATKETLEEKINEIITKYNYKKMIYGTDLGLDLNKIQAEE
                     KICFDKEIENLRYEVFHSDFSIVHARAGVSSHGVALIPSSKGQPRMLSLAPKLCIVLL
                     KKEDIVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIVIY
                     "
BASE COUNT         1628 a          702 c          913 g         1566 t
ORIGIN      
        1 acaaaatgat acataagaag ccttatgatt tttcttaaat tttaatttca ttatatatat
       61 tttaagaatt tgttagaatg aagagaaact ttaaataaaa taaaacaaag gagaagacac
      121 attatgtggc aacaaattta tgatccgttt aatagcattt ggctcagtgc cttatttgct
      181 tttttaccta ttctttgctt tttagcttgt ttggtatttt tcaagttaaa aggttatcaa
      241 gcgggttttt taaccgtggt tttggcaagc gttatagctt tatttgttta tgatatgcct
      301 tggaatttag taggtgctag ttttgtacaa ggctttacaa atggtatgtg gcctatagct
      361 tggattatta tcgcggctat ttttctttac aaactctcta tcaaatcagg ttcttttgaa
      421 atcattaaaa aaagcgtgat gagcatcact cctgatcaca gaattcaagt gattttgata
      481 ggtttttgtt ttggttcttt cttagaaggt gctataggtt ttggtggtcc agtagctatc
      541 acagcagctc ttttggtggg acttggtttg cgtcctttac aagcagcagg actttgtctt
      601 atagccaata ccgcacctgt tgcttttggt gctgtgggga ttcctattat cgctatggca
      661 aatttagtag gagttgaagc tcattctgtt tctgctatgg tgggtagaat gcttgttcca
      721 cttagtctta ctataccttt ttttatagtg tttttaatgg atggtttaaa aggggtaaaa
      781 gaaactttcc ctgctatttt agttgccgca ttaagcttta cagcaacgca attttggagc
      841 tcaaatcact taggcgctga acttcctgat attatttcag ctattgtgtc tttagcagtt
      901 acaactatct ttttaaaatt ttggaaacca aaaaatattt ttagactaga tggagaaact
      961 cattttagcg aagataatac cctaaatttt ggtgatgtgt taaaagcttg gacacctttt
     1021 attttactta tagtttgtat tatcatttgg actcagcctt ggtttaaagc tatctttgat
     1081 aaagatggtt ttttaagcta tacaagcatt agcttgcaat ttagcaatct tacaagcggt
     1141 attttaagtc cttctatcac aggtataggc gaagctaaac ctctttcttt aggacttgga
     1201 atcgatctta tcaatggtaa aagtgtagct caagcaggaa ctgcgatttt acttgcagct
     1261 tttttaacca tagctatttt aagaataaaa gctgaagatg ctgctgaatg tttttgggca
     1321 accctaaaag aaatggctat cccttgtctt accataggtt tggttgtagc ctttgctttt
     1381 atttctaaaa atagtggtat gagtactact ttaggacttg cttttgctca tacaggagat
     1441 gcttttgcat tcttttcacc tattataggt tggattggag ttttcctaac aggatcagat
     1501 acaagtgcta acttactttt tggaaccttg cagcaagtaa gtgcgcaaaa actaggcgtt
     1561 agtgaagctt tattcttagc agcaaactct gtaggtggag tagtaggaaa aatgatcagc
     1621 cctcaaagta tagctattgc ttgcgcagcc gttggacttg taggcaaaga atctgatctt
     1681 ttcaaattca cactcaaata ttctatagct tttatcattt taataggaat ttggacttgc
     1741 attatcgcat tctttttaca aggaatcatt ccagaggtag tagccaaata aaaacaaact
     1801 tgcaagattt attcttgcaa gtttaagcaa gttttaaatg aaaaaatttt gaaaatattt
     1861 ttatcattga tttaattttg attttatttt tctaaagtta gaataattgt ttatattaaa
     1921 tctcttaaaa tgaaggagaa gaaatgaaaa aggtgtattt ttacgccaca tgcttaggaa
     1981 ctgctgccat gcaagaaagc gttcttaatg gtattaaact tttacgccga gaaggagtgg
     2041 aagttatttt taaaaaaaac caaacctgtt gtgctcaacc ctcttttaat tcaggatatt
     2101 ttaatgaaag tcgcgaaata gccttataca atgtagattt atttgacaaa gattatccta
     2161 tcgttgtacc tagtggatct tgtgcgggta tgatgagtca tgattataaa gagcttttta
     2221 aggatagacc tgaattttct agagtaaaag attttagctc gcgtgttata gaactttcac
     2281 aatatctcga tgaagtttta aatgtaaatt atgaagataa aggagaacct attaaagtga
     2341 cttggcattc taattgccat gctttaagag ttcaaaaaag tatacaagca agtaaaaatc
     2401 tcattagaaa acttaaaaat gttgaacttg tagaattaca atatgaagaa gaatgttgcg
     2461 gttttggggg aactttttct gtaaaagaac ctgaaatttc aaatgctatg gtaagaaata
     2521 agattaaaga tatacaaaat accggagtaa aatacctcat cagtggagat ggtggctgtc
     2581 ttttaaatat agatggaact atgcgcagaa tgggtttaga tgttaaaggc atacacttgt
     2641 atgaattttt atttaagcgt ttggaaggag agagattatg agtcaaaaaa ttccacacga
     2701 agaaattgtt catattaaat taaacgacat tcaaatgcgt gaaaatttga tgactgctat
     2761 gcatactttg caaaaaaata gacttggggt cattgatgca agatttaggg attggcaagg
     2821 attaagagcc aaagcaaaac aagctaaaaa caatgcctta atgagcctaa aagataggct
     2881 tttagaattt gaaaaaaacg ctacaaaaaa tggcatacaa gtgcattggg caagtagcga
     2941 taaggatgct tgtgaaatag tctatgaaat catgcgtgaa aaaaatatca ccaagctttt
     3001 aaaaggcaag tcaatggcga gtgaggagat aggattaaat cattatttag aaaaaaaagg
     3061 tttaaaagcc atagaaaccg atcttggaga gcttatttta caactcaatg aagaaccgcc
     3121 tttgcatata gttgtccctg ctattcatag aaatcgccac gaaataggtc aaatttttaa
     3181 agataaactt ggtgcaaaat tagaaaatga cgaacctgaa agcttaaatg ccatagcaag
     3241 agatcattta agaaaagact ttgaaggctt aaaattagga cttagtggtg taaattttgc
     3301 catgtcaaga gagggggctt tttggcttat agaaaatgag ggaaatggta gaatgtgtac
     3361 cacagcaccc gatattcaca tcgcactttg tggtgtagaa aaagttatgg aaagctttga
     3421 agatgcagca actatggttt ctttacttac tccttcagcc acaggacaat ttatacctac
     3481 ttataacaac attatcacag gcccacgaaa aaatggggat ttagatggcc caaaagaagt
     3541 gcatgtgatt ttatttgatc acaatagaac caaaatgcta gctcataaag attattatga
     3601 ggctttgcgt tgtattcgat gtggggcttg tatgaatttt tgccctgttt atgatcaaat
     3661 cggcggacac gcataccaaa ccacctatcc aggacctatt ggtgaagtaa tcagtccaaa
     3721 tatttttggt atagatcaca caggtgatat tttaaatttc tgttcgcttt gtggacgctg
     3781 ttcagaagtt tgtccggtgc aaattccttt agctgatctg attagaaaac taagatgcga
     3841 taagatagga caaggagaaa atccacctat gggtgcaaaa aatatccatc ataatgcaat
     3901 ggaagccttt gcatttaagc aattcaaaaa agcagcaaca aaaggtgaaa gatggcgttt
     3961 tgcactttca aaagcgcatt attttaattg gtttgtgcaa aacttatcag gagctttacc
     4021 agtgattaaa aaatggtatg cttttaaaga attacctcaa atcaaaaaag atctatataa
     4081 agaaattcag gctatagaag gagtaattta tgagtaaaat caatgaaatt tctaacaaaa
     4141 gcaaagaaaa aattttatca gcactcaatg aagcttatga agcaaaagat tttacttatc
     4201 aagccagtat agatcctgta gagcatattc aaacaaaaga agatgcctta gctgaaatga
     4261 agcaaaaaat gagtgataat aaatacattg ttgaaaacgc tactaaagaa actttggaag
     4321 aaaaaatcaa tgaaattatc acaaaatata attacaaaaa aatgatatat ggcactgatt
     4381 taggcttaga tttaaacaaa attcaagccg aagaaaaaat ttgctttgat aaggaaattg
     4441 aaaatttacg atatgaagtt tttcatagcg atttttctat agttcatgca agagctggag
     4501 taagctctca tggcgttgct ttgatacctt caagcaaggg acaacctaga atgctaagtc
     4561 ttgcacctaa gctttgtata gtgttattaa aaaaagaaga catagtaaaa agccttagcg
     4621 aagctttaaa tttggtaaaa aaagaaaatg aaattttacc tacaaatatt ttatttatcg
     4681 caggtccttc aagaacagca gatatagaat taatcactgt ttttggcgtt catgggcctc
     4741 aaattgctca tattgttatt tattaaaaag ttttagctct agtgttattt actagagcta
     4801 aaaccagct
//
LOCUS       DBBXOW010000098         4758 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.099, whole genome shotgun sequence.
ACCESSION   DBBXOW010000098 DBBXOW010000000
VERSION     DBBXOW010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.099"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(44..802)
                     /gene="map"
                     /locus_tag="ACJE1S_001778"
     CDS             complement(44..802)
                     /gene="map"
                     /locus_tag="ACJE1S_001778"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HGG0807298.1"
                     /translation="MIELKKPAEIEKLRVANQIVAKTLDFLENEIKAGMSLKQIDKMA
                     EDFILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDEKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGKISSTDEALISCAKDALYHAIDIIREGMRFKELSAALGEFIDLRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHF
                     NGKWGAGSVDELNSAHYEHCVAIINGRAEILSSL"
     gene            complement(812..1555)
                     /gene="murI"
                     /locus_tag="ACJE1S_001779"
     CDS             complement(812..1555)
                     /gene="murI"
                     /locus_tag="ACJE1S_001779"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HGG0807299.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIVKFCLEALDFFSKFNIDMLIIACNTASAYALDALRLKADFPIYGVIDAGVEATKK
                     ALLDKNKKILVIATKATIQSKEYQNRLQKQGFNNVDALATGLFVPMVEEGIFEGELLQ
                     SAMRYYFKGIETPDALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLKQRQKLL
                     LKEEKAKLHFYASSDVKSLENTAKIWLNL"
     gene            complement(1557..2021)
                     /locus_tag="ACJE1S_001780"
     CDS             complement(1557..2021)
                     /locus_tag="ACJE1S_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HGG0807300.1"
                     /translation="MRFVIFFLVVIAFYIGGCSLAQNASHTPTNYNVDKETRLRMIAN
                     EWKKTPYVLGGTTKKGADCSGFAQSTLAQFNTRIPRTTTKQLRSGIKVSKSKLKTGDL
                     VFFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVREVDLNSSYWKNRYIGARRY"
     gene            complement(2030..3199)
                     /gene="nhaA"
                     /locus_tag="ACJE1S_001781"
     CDS             complement(2030..3199)
                     /gene="nhaA"
                     /locus_tag="ACJE1S_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HGG0807301.1"
                     /translation="MNNIVHKLRTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     GALGGILIPALIFAIVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSVAAFVVVGIAIFMMLILNILGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIITAFFIPMQTKNGEAFLEEIYESLKFWLAFVILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRP"
     gene            complement(3196..4344)
                     /gene="nhaA"
                     /locus_tag="ACJE1S_001782"
     CDS             complement(3196..4344)
                     /gene="nhaA"
                     /locus_tag="ACJE1S_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HGG0807302.1"
                     /translation="MQAVKKIILSETFPGILLIFFTLLALLFKNSSLSVIYTDFFHAN
                     FTIGFDHFQIAKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFIAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDLR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFGFCYLAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEYADKLAILVASFLSAIVGFIYLKIIK"
     gene            complement(4470..4652)
                     /locus_tag="ACJE1S_001783"
     CDS             complement(4470..4652)
                     /locus_tag="ACJE1S_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative motility protein"
                     /protein_id="HGG0807303.1"
                     /translation="MISDATMSNANLLTAVNTSVLKKSMDTNEVLMNELIKGMESASG
                     ASALQTSSSSGLDIYA"
BASE COUNT         1813 a          926 c          582 g         1437 t
ORIGIN      
        1 aaaaattttt gtaaaaattt cccaattttt acaaataaaa ctcttataag ctagataaaa
       61 tttctgcgcg cccattaata atagccacac aatgctcata atgagcacta ttaagctcat
      121 ccacacttcc tgcaccccat tttccattaa aatgctttgg agttccatcc ttttggcata
      181 tcataggttc tatacaaaaa accattccat ttttaatttt tggaccactt tttgcgcttg
      241 cgcctttttc taaataattt aaaatttcag gttctccatg aggtttgcgt cctataccat
      301 ggccacaata tccacgaagc ggaacaaaac ctcttaaatc tataaattct cccaaagctg
      361 cagaaagctc tttaaaacgc ataccctcac gaataatatc tatggcatga tataaagcgt
      421 ctttagcaca agaaatcaaa gcctcatctg tggatgaaat tttacctata gctatagtac
      481 gcgctgcatc accataatat ccatcaatca aacttcccac atcaagtcct aaaatatcac
      541 cctctttgat gattttttca tcaggaattc catggataca aacctgattt aaagaagtgc
      601 aaattgcacc aggaaaacca taaagccctt taaatgaagg ttttgctcca agacttaaga
      661 taaaatcttc cgccatctta tcgatttgct taagactcat acccgcttta atctcgtttt
      721 ctaaaaaatc caaagtctta gcgacgattt gatttgctac tcttaatttt tctatttctg
      781 ctggtttttt taattctatc attgtatttc cttataaatt tagccaaatt ttagcagtat
      841 tttctaaaga cttaacatca cttgaagcat aaaaatgtaa ttttgctttc tcttctttta
      901 acaaaagttt ttgcctttgt tttaaaaact ctactatagc atctcctgaa tgaataagct
      961 ttgtctttga accaaaataa acactcaagg aatttgctag caaaggaaaa tgagtacaag
     1021 caagtatcaa agcatcagga gtttcaatcc ctttaaaata ataccgcata gcactttgca
     1081 acaactctcc ttcaaaaata ccctcttcaa ccataggcac aaaaagaccc gtagctaaag
     1141 cgtctacatt attaaaacct tgtttttgca aacgattttg atattctttt gactgaattg
     1201 ttgcctttgt ggcaataact aaaatttttt tatttttatc taacaaggct tttttagtag
     1261 cctcaacacc cgcatcaata accccataaa taggaaaatc agcttttaat cttaaggcat
     1321 ctaaagcata agcactagca gtattgcacg caataataag catatcgata ttaaattttg
     1381 aaaaaaaatc caaagcctca agacaaaatt tgactatagt atctttatct ttaaccccat
     1441 aaggaacgcg ggcagtatct ccataataaa taatttcgtc aaaaagtctt gcctcataaa
     1501 gtgattttaa aacactaagt ccacctacac cactatcaaa aacgcctatt ttcatcttaa
     1561 tatcttctag cacctatata tcgatttttc caataagaac tatttaaatc cacttctctt
     1621 actccaccct ttgtagaaag atggataaat ttacccttac tcatataaat tcccacatgc
     1681 ataccatttg gtcctctacc tgttttaaaa aaaacaagat ctcctgtttt tagttttgat
     1741 ttagaaactt ttatacccga gcgtagttgc tttgttgtag tgcgtggtat gcgtgtatta
     1801 aactgagcta gggtgctttg agcaaaaccc gaacaatcgg ctcctttttt tgttgttccg
     1861 cctaaaacat aaggagtttt tttccattca ttagcaatca ttcttaatct tgtttcttta
     1921 tcaacattat aatttgttgg ggtatgactt gcattttgag ctaaactgca tccacctata
     1981 taaaaagcaa tcacaacaag aaagaaaata acaaatctca taaatttcct taaggacgcg
     2041 tggtaaaaaa tttaagataa ataaaacccc aaatcccaga acaaaatgaa gcaatcaaaa
     2101 tagcaagatt atctgcataa ttaaaaatat cgctaacttc atacgccaag ccatcgataa
     2161 acaaactcat tgtaaaacca attcctgtaa gtatacaaac cccataaagt tgtttcaaat
     2221 ttgaaccttg gggcaaggct gcaaatttaa agcggattgc caaataagaa aacaaaaata
     2281 cacccacttg tttacccaca aaaagcccca agaaaatacc tatacttaca cctgaaaaaa
     2341 ttgctcctat atcgatattg gataaattta ctccagcgtt agcaaaagca aataaaggta
     2401 agataacaaa agcgagccaa aattttagac tttcatagat ttcttctaaa aatgcttctc
     2461 catttttagt ttgcatcggt ataaaaaatg ctgtaataat tccagctaaa gttgcatgca
     2521 caccactttt taaaacacta atccaaagaa taactgagca aataaaataa aaagactttc
     2581 ttgttattcc taaaatattt aaaatcaaca tcataaaaat agcaataccc acaactacga
     2641 aagcagccac agaaagcttg gttgtataaa aaatcgcaat aattaaaata gcacccacat
     2701 catcaaaaat agccaaagaa agtaagaaaa tttttaaact tgatggaata tgtttgccac
     2761 acatcatcaa aatagctaaa gcaaatgcag tatctgtagc cgttggaata gcccatcctt
     2821 ttaaagtgta agcatcgcct atattgacta tagcaaatat taaagcaggt ataagtatac
     2881 cacccaatgc ccccataaaa ggcaaaacaa tatttttagg atttttaaaa tctccgtgca
     2941 aaaattcctt cttaagctca agccctatag caaagaaaaa tatagatata agcccatcat
     3001 ttatccaaag taaaaaaggc ttgttaagct caaattcacc tacactaaat ccgactttta
     3061 aatttagaaa ttctcgataa tgttcgctaa aagacccgtt ttgcacaagc aaagcaagca
     3121 aagtgcaaac tataagtaaa acgccgccaa aagcctcatt taaaactaaa gttcttaatt
     3181 tatgtactat attattcatt taataatctt aagataaata aaaccaacaa tggcacttaa
     3241 aaaactagct actaaaatag caagtttatc cgcatattca aaaatatcac tatttttata
     3301 agccaaacca tcaataaaca agctcatcgt aaaaccgatg cctgttaaaa tacatatacc
     3361 ataaaatttt ccatatttaa tattttcagg taattttgca agctttaatt ttatagccaa
     3421 ataacaaaat ccaaaaaccc ctagttgttt tcctaaaaat agtcctaaaa taatcccaag
     3481 acttacagga gaaaatactg aaccaagatg catatctctt aaatcaatac ccgcatttgc
     3541 aaaagcaaat aaaggtaaaa taaaataaac tacccaagga tttaaatcct taagaacttc
     3601 atgtaaataa ggttttttat tttttgtatc aagaggtata aacaaagaaa tgatcacacc
     3661 agccaaagtt gcatgcactc cacttttaag catagctatc cacaacacaa cacctaccaa
     3721 cacgtacaaa gaaagatggg tgatgtgata ataatttaac aaaagcagag caaatataca
     3781 aaacaaacaa ataataattg ctaaagctga aagctgatct gtataaaaca aagcaataat
     3841 aacaatagca cccaaatcat caaaaatagc taaagagagt aaaaaaagtt ttaaacttgt
     3901 aggaatttta tttcccaaaa gcattaaaat acccactgca aaagctatat cagttgctgt
     3961 aggtattgcc caacctttca tagcaaaatc atgagaataa ttaatagcaa taaaaattaa
     4021 agccggagta atcatacccc ctaaagctcc aaatataggt aaagatacag ctcttatatt
     4081 tttaagttgt ccgcgtaaaa tttcatattt taattcaagt cctatacaaa ggaaaaaaat
     4141 agcaatcaaa ccatcattta tccataaatc caaagattta gcaatctgaa aatgatcaaa
     4201 tcctatagta aaattagcat gaaaaaaatc tgtataaata acgcttaagg aagaattttt
     4261 aaaaagtaaa gccaagagag taaaaaatat gagcaaaatg cctggaaaag tttcacttaa
     4321 aattattttc tttacagctt gcatttacgc cccttgatta taaaattcaa tatgttaatt
     4381 attataacca aaaaatatta aagaaatgat tattttaaca agatatatcc ttatttaggg
     4441 tgtaaagcac accctaaatt taaagatact taagcgtaaa tatctaaacc gctagagcta
     4501 gaagtttgca aagcagaagc ccccgatgca ctctccatac ctttgataag ctcattcatc
     4561 aacacttcat ttgtatccat tgattttttc aaaactgaag tatttaccgc tgttaataaa
     4621 ttagcattac tcatagttgc gtctgaaatc ataacaccct cctaagtata atttatgtat
     4681 gaagacttaa gtagtatcgg aaaaaatttt aaacacttaa ccctttaaat tcgataaaaa
     4741 taatttttat ttttgttt
//
LOCUS       DBBXOW010000099         4577 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.100, whole genome shotgun sequence.
ACCESSION   DBBXOW010000099 DBBXOW010000000
VERSION     DBBXOW010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4577
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.100"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..761)
                     /locus_tag="ACJE1S_001784"
     CDS             complement(<1..761)
                     /locus_tag="ACJE1S_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HGG0807304.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALKDK
                     LDNFIDESRKNGFLDFLGNKYLKDIKEVFKQNNIT"
     gene            complement(856..2151)
                     /locus_tag="ACJE1S_001785"
     CDS             complement(856..2151)
                     /locus_tag="ACJE1S_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0814 family flagellar-dependent secreted
                     protein"
                     /protein_id="HGG0807305.1"
                     /translation="MSIFSINDNSNYNSILSQAKANKESKENSKISFANSFLKQNASK
                     LNEIQNANSQTLARSEVLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKY
                     KQVDLNTDTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIYSFNTSFKEHTAN
                     DLGVSNYYTNIDMADTIRQYYSKFNQIINHSFGNSNKTSFSVEDLNSLPKGYSIHNTD
                     FKFMFQNLDSQTITNFYNTQERYNEAEQLGMFGHINIGLQPLNFTPQSMQTQNLDENS
                     VKYTFNPDMSVYPQNEDGSYSKEALFMSFLKSSGGEALEGGNTTLNPLVKAHIEAMTK
                     ESFDGSLASLDDIMTGKVDFASLLKGYAQDGWLDADIYAIEKGVAWQNTSIGYGGAWF
                     DNQFNQAKANGWKASNQSIDSYVNSIMDRLNNLLGQTRV"
     gene            complement(2227..3507)
                     /locus_tag="ACJE1S_001786"
     CDS             complement(2227..3507)
                     /locus_tag="ACJE1S_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0814 family flagellar-dependent secreted
                     protein"
                     /protein_id="HGG0807306.1"
                     /translation="MSIFSINDNSNYGSILSQAKANKESKENSKISFANAFLKQNASK
                     LSDIESKNSQTLARGEILSNNNALSNNSNSTNISNSSNTNLSINNATKTSSPNYDISS
                     EFKNSIYTLKYKQVDLSTDTAYGYSVDKDGYMGSDFNNAAGLPEDFKIHKSTLDEIER
                     FNQHGMADETSGNYYNSFDMASIVKSYYNSFNQVISAFPNDKTSFSEADLEQLPKGLN
                     YGRNENKEKIVKNIFNAEQFHEAQAIKYSTMNLGMNLMKLDFSPQSMEQGPSNEGEFN
                     PDMSVYPQNEDGNYSKEALFMSFLKSYPPFPSPNQVVFSPEAKVREAKLELEMKANPS
                     FSVSLDDIMTGKVDFASLLKGYAQDGWLDADIYAMEKGVAWQNTSIGYGGAWFDNQFN
                     QAKANGWKASSESINSYVGSIMDRLNNLIGQTRV"
     gene            complement(3583..>4577)
                     /locus_tag="ACJE1S_001787"
     CDS             complement(3583..>4577)
                     /locus_tag="ACJE1S_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Cj0814 family flagellar-dependent secreted
                     protein"
                     /protein_id="HGG0807307.1"
                     /translation="AYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIKKAAENDP
                     VVSSTKEYLGVSEYYTNIDMAETIKQYYNLFSNALGQSFPNDKTSFSEADINSMPSGY
                     GVSGTQWMDFNDPSNRMNITGLKDFSNSLISNIYKTPEQAKEANDLWADSGYMIDGLL
                     PKTLGLSLEEIKNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKSQGGQPVESP
                     KTTLNPKVEAYNTAMAKESFSTTSVDIGDIMTGKVDFASLFKYLASKNGKLEGQLYMY
                     ENNIPKESAMGNWALDAEIKQAIANGWKAKPSTINSYADSIMDRLNNLIGQTRV"
BASE COUNT         1462 a          803 c          559 g         1753 t
ORIGIN      
        1 aaagtgatat tattttgctt aaaaacttct ttaatgtctt ttaaatactt attgcccaaa
       61 aaatctaaaa agccattttt cctactctca tcaataaaat tatcaagctt gtcctttaaa
      121 gcttcatcac cttttcttac agctataccc caaaactcag gattttcttg aaaaggcgct
      181 aaaatggctc tggttgtatc ttgatgcttt tgccaagtcc gataaatcgt aagttgatca
      241 taaaaaaatc catcagcctt gccttgaatc acttccaaaa tagcagcatt ttctttatca
      301 aataaattaa tagttgcatt ttttaaattt ttaaccgcat ataaatgccc tgtagaacca
      361 cgctttaaag ccaaaacttt gcccttttta tctaaatctt tgatatttgt aatatcagag
      421 ttcaaaggag ttaaaatagc caaatttgcc ttagcataag gaatgctaaa atccaccact
      481 ttctttctct catcggtaat tgtcatagag gacataataa gatctatctt ggctgttttt
      541 aaagcaggta ttaaaccatc ccaagcgata ttttttacta caagtttata gccgtttttc
      601 tttgcaaaag cttctaaaaa atccacgcta attccacttg ctttgcctgt tttatcgctc
      661 atttcaaaag gcggatatcc aagctccatt cctacaacca aatcttttgc actcaaattt
      721 aaagcaaaaa aagagataaa aatcaaaata atttttttca taatttcctt tcaaattttt
      781 ttgtaaaaaa attatactaa ttttatctta ttttattatt agcaatttat ttcaaactta
      841 aaaaattaat acttcctaaa ccctagtttg tcccaaaaga ttattaagtc tatccattat
      901 agaattaaca taagagtcta tactttggtt acttgctttc caaccattag cctttgcttg
      961 attaaactga ttatcaaacc aagctccacc ataacctatg cttgtatttt gccaagcaac
     1021 tcctttttct attgcatata tatctgcatc aagccaacca tcttgtgcat agccttttaa
     1081 taaacttgca aaatctactt tgcctgtcat gatgtcgtct aaggaagcta aagagccatc
     1141 aaagctttct ttcgtcatag cttcaatatg tgctttaact aatggattta atgttgtatt
     1201 accaccttct aaagcttctc caccgctaga ttttaaaaaa ctcataaaca aagcttcttt
     1261 agaataactt ccatcttcat tttgtggata aactgacata tcaggattaa aagtatattt
     1321 tacactattt tcatctaaat tttgagtttg catactttgc ggagtgaaat ttaatggttg
     1381 taagcctata ttaatatgcc caaacattcc taattgttct gcttcattat atcgttcttg
     1441 tgtattatag aaatttgtta tagtttgact atctaaattt tgaaacataa acttaaaatc
     1501 cgtattatga atactatacc cctttggtaa agaatttaaa tcttctacac taaagctagt
     1561 tttattagaa ttaccaaaac tatgatttat aatttgatta aatttggaat agtattgtct
     1621 tatggtatcg gccatatcta tgtttgtata ataatttgaa acgcccaaat cgtttgcagt
     1681 gtgttcttta aaacttgtat tgaaactata tatctcatcc aaagtagatt tatgtatctt
     1741 aaaatcttca ggaagtcccg cagctttgtt gaaatcactt cccatataac catctttatc
     1801 cacactataa ccataggctg tatcagtgtt taaatctact tgtttatatt ttagagtata
     1861 aatagagttt ttaaattcac ttgatatatc ataattagga gaacttgttt tactacttat
     1921 actaaaatta gtattattgc tagtatttgt tgtattagta gaatttaata cttcacttct
     1981 tgctagagtt tgtgaatttg cattttgaat ttcatttaat ttactagcat tttgttttaa
     2041 aaaagaatta gcaaaactta ttttagaatt ttctttactt tctttattag cttttgcttg
     2101 tgaaagtata gaattatagt ttgagttatc attgatgcta aagatactca tattaattcc
     2161 ttaatttaga tttttctatt tttttatata gataaacaag tttttaaacc tacttatcca
     2221 taacccttaa accctagttt gtcctataag attattaagt ctatccatta tagatccaac
     2281 ataagaattt atactttcac tgcttgcttt ccagccatta gcctttgctt gattaaactg
     2341 attatcaaac caagctccac catagcctat gcttgtattt tgccaagcaa ctcctttttc
     2401 cattgcatat atatctgcat caagccagcc atcttgtgca taacctttta ataaacttgc
     2461 aaaatcaact tttcctgtca taatgtcatc taaggaaacg ctaaaagaag gatttgcttt
     2521 catttctagc tcaagttttg cttcacgaac ttttgcttca ggactaaaaa caacttgatt
     2581 tggagatgga aaaggcggat aggattttaa aaaactcata aataaagctt ctttagaata
     2641 attcccatct tcattttgtg gataaactga catatcagga ttaaattcac cttcatttga
     2701 aggtccttgc tccatgcttt gcggagaaaa gtcaagtttc ataaggttca tacccaaatt
     2761 catagtagaa tacttaatcg cttgtgcttc gtgaaattgt tccgcattaa atatattttt
     2821 tacaattttt tctttgtttt cattacgacc ataatttagt ccttttggta attgctctaa
     2881 atcagcttcg ctaaaacttg ttttatcatt tggaaatgca cttattactt gattaaaact
     2941 attataatag gatttaacaa tagaagccat atcaaaacta ttataataat taccactagt
     3001 ttcatcagcc ataccatgtt gattaaatct ctctatctca tccaaagtag atttatgtat
     3061 cttaaaatct tcaggtaatc ctgcagcatt gttaaaatca cttcccatat aaccatcttt
     3121 atctacacta taaccatagg ctgtatcagt gcttaaatct acttgtttat attttagagt
     3181 ataaatagag tttttaaatt cacttgatat atcataatta ggagaacttg ttttagtagc
     3241 attattaata ctaaggttag tattgctact atttgatata ttagtagaat ttgaattatt
     3301 acttaatgca ttgttgttac ttaatatttc acctcttgct agagtttgtg aatttttact
     3361 ttctatatca cttaacttgc tggcattttg ttttaaaaaa gcattagcaa aacttatttt
     3421 agaattttct ttactttctt tattagcttt tgcttgtgaa agtatagaac catagtttga
     3481 gttatcattg atgctaaaga tactcatatt aattccttaa tttagatttt tctatttttt
     3541 tatatagata aacaagtttt taaacctact tatccataac ccttaaaccc tagtttgtcc
     3601 tataagatta tttaatctat ccattataga atcagcgtag gaattaatgg tgctaggttt
     3661 tgctttccag ccattggcaa tggcttgttt aatttcagca tctaaagccc aattacccat
     3721 agcagattct ttaggaatgt tattttcata catataaagt tgcccttcta attttccatt
     3781 tttactagct agatatttaa atagacttgc aaaatctact ttgcctgtca taatatcacc
     3841 tatatctaca ctagtagttg aaaaactctc tttagccata gctgtattgt aagcttctac
     3901 ttttggatta agtgtggttt ttggactctc aacaggttgt ccaccttgag attttaaaaa
     3961 actcataaat aaagcttctt tagaataact tccatcttca ttttgtggat aaactgacat
     4021 atcaggatta aattgccaat cttcaccttt agaaacattt ttgatttctt ctaaggataa
     4081 acctaaagtt ttaggcaata atccatcaat catatatcca gaatcagccc aaagatcatt
     4141 agcttctttt gcttgttcag gggttttata aatatttgaa attaaagaat ttgaaaaatc
     4201 ttttaaacct gtaatattca ttctattgct tggatcatta aagtccatcc attgcgttcc
     4261 acttacacca taaccactag gcatagaatt tatatctgct tcactaaaac ttgttttatc
     4321 atttggaaaa ctttgaccta aagcattaga aaaaagatta taatattgtt ttatggtttc
     4381 agccatatcg atattagtat aatactcgct tacgcctaag tattcttttg tacttgaaac
     4441 aacaggatca ttttcggcag cttttttaat ctcatccaaa gtagatttat gtatcttaaa
     4501 atcttcagga agtcccgcag ctttgttaaa atcacttccc atataaccat ctttatccac
     4561 actataacca taggctg
//
LOCUS       DBBXOW010000100         4560 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.101, whole genome shotgun sequence.
ACCESSION   DBBXOW010000100 DBBXOW010000000
VERSION     DBBXOW010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.101"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            63..734
                     /locus_tag="ACJE1S_001788"
     CDS             63..734
                     /locus_tag="ACJE1S_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HGG0807308.1"
                     /translation="MEKLAVINGVGVELEVQGADQVTCTSLSVAEVFNKNHKNIIRKI
                     NEFPKDNFTKLNFEPSKYIDSTGRILPCYKITRDGFSLLVMGFTGEKAYKWKIEFIKA
                     FNEMEKRLRNIEYEKHDKLAFRQSLGYKSQLAQQKQKYENEIKALKYDLEQSKNNFKD
                     KLNCILAKNGLYAFDFKTFKNYALKLEKMLKDLKNDENKENKLLLRMQNDFLECLELY
                     KSVNI"
     gene            812..1846
                     /locus_tag="ACJE1S_001789"
     CDS             812..1846
                     /locus_tag="ACJE1S_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5309 family protein"
                     /protein_id="HGG0807309.1"
                     /translation="MALPSMGHTAPATENVKLKQSIYETIIKIGATETPILNKIGTSK
                     VTNPLTHSWLTDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLK
                     ANQYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAG
                     FFHYIAKGKDSFADGKRGNVLAFDEAGDWSGTATELTEDKLNQILQTIWNSGVTPKDV
                     FLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIA
                     GDFEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKA
                     KAVLKAAKGA"
     gene            1846..2250
                     /locus_tag="ACJE1S_001790"
     CDS             1846..2250
                     /locus_tag="ACJE1S_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002796938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807310.1"
                     /translation="MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVP
                     SVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDEALSFAVINYVCYLITR
                     CEEKDFLALCDKIINEYIANDGKELDDERTWL"
     gene            2231..2425
                     /locus_tag="ACJE1S_001791"
     CDS             2231..2425
                     /locus_tag="ACJE1S_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807311.1"
                     /translation="MKEHGCECNFTNKFNRALSYKDYAQSINSADFIAYLDDKKWLLA
                     MDDLLFFCEKRIKDSDYYEG"
     gene            2428..4089
                     /locus_tag="ACJE1S_001792"
     CDS             2428..4089
                     /locus_tag="ACJE1S_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807312.1"
                     /translation="MGTSLNELKTGREKLEIINQVLARISNVATALDNTRIEEIVGLK
                     EQVNNFYNQILELKNLVVKNSELTQSNTDFTKNKRNEIEKISNEIKNTLNNIEEIYNN
                     IIKSEKDISNGVNFVKDKYPELNEFNKNFEIIKIKLEEYYNIAVDFNAGLKKIEENKN
                     LTKSYLDLSIELKQQILQELEHAQSIKEDLHSNIELVNKLVSNIVATKNEIISITNNF
                     KNVKSEVQNIVNHAEATIKLKINTILFENQRLNQNMINLLKRCEKLEDEIVGKYEDIL
                     KIEDLINSSTQIINDLTEAVKQSEQISEDMRSFTAIINDFKTEISNLKADLESYGERL
                     KGQLDLKLAQANSSVDAKISSIETLKNQIEAYVETNKNTVDVALANFIERSKIANEDL
                     GRLAEVARTELSNDKTAIESYLLELKKSIVDEMKEVSNSVTDETSGILAQKNQIELII
                     SQGKSDLDALFNNFNSNYQNKLNEFNSNTNEKLASINSLSEKSITNIQNKTDENIGRL
                     DTASEEKLAKFDEIIKDNLGGIYSHIFSIENVLFDKKIIKLSYKE"
     gene            4093..>4560
                     /locus_tag="ACJE1S_001793"
     CDS             4093..>4560
                     /locus_tag="ACJE1S_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807313.1"
                     /translation="MADLKQVANDLNLASQSLQGLREKYDGALDLLDNKNTEITGALD
                     SVKSDALQEIQTIRDTATSQISQLKDTSLNLVNEAKNTATTEISNKKEEHKQELETKK
                     NEYMSEIVARANEYNLANINAQVQAMDTKITEQINGAKTELNSKIDNKVTKTGD"
BASE COUNT         1944 a          541 c          771 g         1304 t
ORIGIN      
        1 atataattat gctatatttt tacctaataa gtaaaaacta atcaaaacaa aaaggacaaa
       61 aaatggaaaa attagctgta attaatggtg taggtgtaga gttggaagtg caaggagccg
      121 accaagttac ttgcacttct ttaagtgtgg ctgaagtatt caataaaaac cacaaaaata
      181 ttatacgcaa aataaatgaa tttccaaagg ataattttac taagctcaat tttgagccga
      241 gtaaatatat tgatagcacg ggtagaattt taccttgcta caaaatcact cgtgatggtt
      301 tttctttgct tgttatgggt tttacaggcg aaaaggctta taaatggaaa atcgagttta
      361 tcaaagcttt taatgaaatg gaaaaaagat taagaaatat tgaatatgag aagcacgata
      421 agttagcttt tagacaaagc ttaggttaca aatctcaatt agcacagcaa aagcaaaaat
      481 atgagaatga aattaaagct ttaaagtatg atttagaaca aagtaaaaac aattttaaag
      541 ataaattaaa ttgtatattg gctaaaaatg gtttatatgc ctttgatttt aaaactttta
      601 aaaattatgc cttaaaacta gaaaaaatgt taaaagattt aaaaaatgat gaaaacaaag
      661 agaataaact acttttaaga atgcaaaatg atttcttaga atgtttagaa ctttataaaa
      721 gtgtaaatat ctaatttgtt tcaaaacaca ctatatttga aatagctatt tttggaaaaa
      781 tccttaaaac taaactaagg agaattcaaa aatggcttta ccttcaatgg gacatacagc
      841 acccgcaaca gaaaatgtta agttaaaaca atcaatatac gaaacgatta ttaaaattgg
      901 agctactgaa acaccaattt taaataaaat aggcacttca aaggttacaa atcctttaac
      961 ccatagttgg cttacagaca cttttgaaga accaaaaaag aacgcaaatt tggaattgag
     1021 caaatttgta ggggaaacaa aaaacacagc tcaaaaaact acaaatgcta ctcaaatatt
     1081 cattaccgaa gccatggtat caaaagcttt gttaaaagca aatcaatatg gtggcaatga
     1141 aatggagtac caaataggca aaaaaaccaa agaacataaa atggatatgg aatatgcttt
     1201 atttggtcta ggtagagata gtgatgtaaa aaaatcagtt ttcaaagatt atgttcaagc
     1261 acaagaagca acaagtggag aaatggctgg attttttcat tatatcgcta aaggaaaaga
     1321 tagctttgct gatggaaagc gtggaaatgt attagctttt gatgaagcag gagattggag
     1381 cggaactgca acagaactaa cagaagataa acttaatcaa attttgcaaa ccatttggaa
     1441 tagcggagtt acgcctaaag atgtcttttt aggagctgac ttaaaaggag ctatcaataa
     1501 atttgctaca agaattttag gcaatgaaac aaaactagca ggacaagtag taagccttga
     1561 aacagatttt ggaacggtaa atttccatat gcatagatta ttaagcccta aatatggttt
     1621 gggtgatgtt ttaattgctg gagattttga gtatatgaaa catgggcttt atattcctac
     1681 tatgattgaa gatgttccaa ctgatattac tgcaaaagca aaaagatttt atacgcaaag
     1741 cactttagaa gtaagaaatg ctgatgcttt tgctataggc gtgggattaa ctagtggaaa
     1801 taatgcaaag gctaaagcgg ttttaaaagc agcaaaaggt gcataatgct ttgtgctacg
     1861 gctaaaaaac tcattatcgc taaagttaaa aattcttaca aaatgataga agatgatgaa
     1921 gttttgaaag cctattttat ggaagcattt tattatattt tatcaaaatg tgttcctagt
     1981 gttcttttaa aaaatgtaga acaaggcgaa aaagttttca ggcaagttag aaataatcat
     2041 tttttgatta ttcctgatga gcctgatttt gacaatgaaa aagaacattt aatgatagat
     2101 gaagcactta gttttgctgt gattaattat gtttgttatt tgattacaag atgcgaagaa
     2161 aaagactttc tggcattatg tgacaagata attaatgagt atatagctaa cgatggcaag
     2221 gagcttgatg atgaaagaac atggttgtga gtgtaatttt acaaataaat ttaatcgagc
     2281 tttgagttat aaagactatg ctcaaagtat aaatagtgct gattttatag cttatttaga
     2341 tgataaaaaa tggcttttag ccatggatga tctgcttttc ttttgtgaaa agagaattaa
     2401 agatagtgat tattatgaag gttaaaaatg ggaacaagct taaatgagtt aaaaacaggt
     2461 agagaaaaac ttgagattat aaatcaagtt ttggcaagaa tttcaaatgt tgctactgct
     2521 ttggataata ccagaataga agaaattgta ggactaaaag aacaagttaa taatttttat
     2581 aatcaaattt tagagcttaa aaatttagtt gtaaaaaata gcgagcttac tcaaagcaat
     2641 actgatttta ctaaaaacaa aagaaatgaa attgaaaaaa taagcaatga aataaaaaat
     2701 actttaaata atatagaaga aatctacaac aacattataa aatcagaaaa agatataagc
     2761 aatggagtta attttgttaa agacaaatat cctgaactta atgagtttaa taaaaatttt
     2821 gaaattataa aaataaaact tgaagaatat tacaacatag ctgttgattt taatgcaggt
     2881 cttaaaaaaa tagaggaaaa caaaaatctt accaaatcct atttagattt atccatagaa
     2941 cttaagcaac aaatcttaca agaattagaa cacgcacaaa gtattaaaga agatttgcat
     3001 tctaatatag agcttgtaaa taaacttgtt tcaaatatcg tggcaacaaa aaatgaaatt
     3061 atatctataa ccaataattt taaaaatgta aaatcagaag ttcaaaatat agttaatcat
     3121 gctgaagcaa caataaaact taaaataaac actattcttt ttgaaaatca aagattaaat
     3181 caaaatatga ttaatctact aaagcgttgt gagaagttag aggatgaaat agtaggaaaa
     3241 tatgaagata ttttaaaaat agaagatctt ataaactcat caactcaaat tataaatgat
     3301 ttgacagaag cagtaaaaca aagcgaacaa ataagcgaag atatgagaag ttttacagct
     3361 attatcaacg atttcaaaac agaaatttct aatctaaaag cagatttaga aagctatggg
     3421 gaaagattaa aagggcaact tgatttaaaa ttagcacaag caaattcaag tgtagatgct
     3481 aagatttcaa gcattgagac tctaaaaaat caaattgaag catatgtaga aactaataaa
     3541 aataccgtag atgtggcttt agctaacttt atagaaagat ctaaaatagc taatgaagat
     3601 ttaggaagat tggctgaagt agcaagaaca gaactctcta atgataaaac agctattgaa
     3661 agctatttgc tagaacttaa aaaaagtatc gttgatgaaa tgaaagaagt gtcaaatagc
     3721 gttacagatg aaacaagtgg aatactagct caaaaaaacc aaatagagct tatcatatca
     3781 caaggaaaat cagatttaga tgctttattc aacaacttta actcaaatta tcaaaacaaa
     3841 cttaacgaat ttaattctaa tactaatgag aaattagctt ctattaattc actcagtgaa
     3901 aaaagcataa caaatataca aaataaaaca gatgaaaata taggcagatt agatacagcc
     3961 agcgaagaaa aactagctaa atttgatgaa attataaagg ataatttggg tggaatttat
     4021 tctcacattt tttcaatcga aaatgtttta tttgataaaa aaataattaa attaagttat
     4081 aaggagtaaa gaatggcgga cttaaagcaa gttgcaaatg atttaaattt ggcatcacaa
     4141 agcttacaag gtttaagaga aaaatatgat ggtgctttag atttgctaga taataaaaat
     4201 acagaaataa caggtgcgct agatagtgta aaatctgatg cgctacaaga aatacaaact
     4261 ataagagata cagctacaag tcaaatttcg cagttaaaag acacatcctt aaatttggtc
     4321 aacgaagcta aaaatacagc tacaactgaa atatcaaata aaaaggaaga gcataaacaa
     4381 gagttagaaa ctaagaagaa tgaatacatg agtgaaattg ttgcaagagc taatgagtat
     4441 aatcttgcca atattaatgc gcaagttcaa gctatggata ccaaaataac cgagcagatc
     4501 aatggtgcaa aaacggaatt aaattcgaaa atagacaata aggtaacaaa aactggagat
//
LOCUS       DBBXOW010000101         4403 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.102, whole genome shotgun sequence.
ACCESSION   DBBXOW010000101 DBBXOW010000000
VERSION     DBBXOW010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4403
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.102"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(47..268)
                     /locus_tag="ACJE1S_001794"
     CDS             complement(47..268)
                     /locus_tag="ACJE1S_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG0807314.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLINLAKLD"
     gene            complement(268..1329)
                     /locus_tag="ACJE1S_001795"
     CDS             complement(268..1329)
                     /locus_tag="ACJE1S_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HGG0807315.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLKTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDVLIVVTQSPDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            complement(1319..2881)
                     /locus_tag="ACJE1S_001796"
     CDS             complement(1319..2881)
                     /locus_tag="ACJE1S_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG0807316.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFNKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLRAEFNFSSYDDSLSFDNFKEASLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEIKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVFDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDARMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKEIEKNSALVSFQ
                     NLNFKGLIIHEN"
     gene            complement(2878..3294)
                     /locus_tag="ACJE1S_001797"
     CDS             complement(2878..3294)
                     /locus_tag="ACJE1S_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HGG0807317.1"
                     /translation="MLNTTLNLPLHHIGVACKNLEKERECFFKLGFYKESEFIDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNIAQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            complement(3287..4180)
                     /locus_tag="ACJE1S_001798"
     CDS             complement(3287..4180)
                     /locus_tag="ACJE1S_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG0807318.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYI
                     QDGISIEEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWIAHIKVRKYFSQYLKNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKMVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKLKTYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            complement(4177..>4403)
                     /locus_tag="ACJE1S_001799"
     CDS             complement(4177..>4403)
                     /locus_tag="ACJE1S_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG0807319.1"
                     /translation="KQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLEEE
                     FEIKFNKEDLSLLKSQSALLEKIQTLKAEK"
BASE COUNT         1445 a          704 c          610 g         1644 t
ORIGIN      
        1 ggagataaat ttgaattaga gataaaagat taaaacctta aaggttttaa tcaagctttg
       61 ctaaattgat taaatcactc actttttgac aatttttcaa gtcctcggct gtgattttta
      121 aagcaaaaag atttttataa agcaccatca cagatacaaa agccaaacta tcccactcat
      181 ctatatcatc aagtagcata tcttcattta agtcttcatc tctatgcata gcttctttaa
      241 gctcttctaa aaattcagtt tttgtcatta tttctccttt gtgtaaatta aaatatcttt
      301 tgtgtataaa tctttgaaat tcaacaccgc acttccccag ctaagccctg caccaaaagc
      361 acttaaactc gctttaaatt cttttggagt atctagttcg caaagtaggg caggtagtga
      421 acaagcgctt aaattagcgt atttttccat gataaaatta ggaactttat catcattaag
      481 ttttaattct tctttaatac aatcaaccaa atacgcatta gattgatgaa aaagatgaaa
      541 agcaatgtct ttttcttcta ccttggaaaa ttctaaaatt tctttaaagc ttttaggttc
      601 gcattctaaa gccatattaa aaatatttgc tccgtccata taaagatttt ctaattgtct
      661 aaactcctca gtttgcatga gtgaatcatc gttgaaaata tctgctttag gtattctcat
      721 cgcacctttt ggaatgatga gtttatcaaa atgtcttcca tcgcttccaa gctcaaaaaa
      781 agcttcatta aaatccgttt tttcaattaa agttgcactt actccatcgc caaaaatagg
      841 ggctaaattc atatttttag ggtggatgaa tttgcttaaa gtatctccac aaatgagtaa
      901 aattttacct aagccacttt gtattaaaga atgagcgaca aataagccgt ataaataccc
      961 tgcacaagct tgccctaaat caaaagctat ggttttagag cttaaattta aaagctgatg
     1021 taaataacaa gccgtagaag gcatgaaaaa atcaggactt tgagttacta cgatgagtac
     1081 atcaagacta tttttatcta tatttaaacc ttgtaaaagt gtattggctg cgtgtttgcc
     1141 aagatcgctt acacaagtgt tttcatcaca aatataacgt gtttttaagc ctatgacttt
     1201 tttcattctt ttaagggttt taatatcatt tgaaaaaacg ctttctaact catcatcaat
     1261 gcaaatttta tgttcaggta cgcttacgca aatgcctgaa attttggctt tatcaaatct
     1321 agttttcatg gattataagt cctttaaagt ttaaattttg aaatgaaaca agggctgagt
     1381 ttttttcaat ttctttagaa atttgttcta aaaagctcaa aaatggcata tttctttcgc
     1441 ctttttgata gtaaagcctt gcattattgt ttttaagatc aaagaaatgt aaagctagtt
     1501 caaaggcttt aaaaaacatt ctagtttcaa gttttctacc taaagcccta caagaaatgc
     1561 aaagatcatc gataaataaa tttccttctt tgcaagaaaa aacaaaaata gcgataatcc
     1621 cactatcgct taatttatca ctcatgctca cacttacaat gagttctttt tgcatgtgtt
     1681 gtgcgacttt ttcttgattt aagcgtgtgt aattagcgat aaattgattg gttttgccta
     1741 aaagttcgct aatgcgaggg atattttgca gatcattttt gctaaaattt aagctgattt
     1801 caagattttg aaaatattct tcatcgctta agcttttaag ctcttctctt aaagcattgg
     1861 ctgctatatc tttggcacga atttgatctt ctttggtatt tgaaagtttt aaaagattag
     1921 gaaaaagttt gattttataa agtatatttt catcgcataa aagtgtttta acgcctgtaa
     1981 atttcgtatt ttcaagctcg gcgatattat catctataaa aagcatagcg ttagtattta
     2041 tattaaattt tttagcaatt tttaagatat tttcaccttt tggctcccaa ttgatcattc
     2101 tagcatcaaa atcatcccat tgtaagatga aatctttcct tatttcaaaa agtttttttg
     2161 cgtctttttc ttcatttttt gaagctaggg caagtaaaaa cccttgtttt ttaaaagttt
     2221 taattttttc ttgtaaggtt ttgtgcaaag gacttaaatt aagattatct ataccctctt
     2281 cacctaaaat tccttgatac aaggtattat caagatcaaa tacaagagct ttaagagcgg
     2341 gttttacaag tgcagggatg agactaagtc ctaaaatttg tgctaaaaaa atcaaggctt
     2401 tattattaag cttagagcct gtaagttctt ctttagctaa gtctaaaata tcttcttcat
     2461 caaaatactc ttttatgagt ttttctatgt taaaaatttc acaatttaaa atttttttat
     2521 ctgttttaat ttctcctaaa ctaagaacta aaatagggtt ttgtgaaatt tttcttagtt
     2581 ctaaaagtct ttcttctata aaattttgca cattattttt atagcgggtt aaatctagcc
     2641 ataaaagttc taaactagct tctttaaagt tatcaaaact caagctatca tcataagagc
     2701 tgaaattaaa ctcagctctt aaattagcaa aatgtaaaaa aggagcaatg atactttgca
     2761 ctccttcaaa agcatgattt ctatggacat taataagaag atcttgactt ttgttaaagt
     2821 ctaattcttt ggcgaatttt ataagctcat tgcgttttaa atggggtgaa aaaagattca
     2881 ttttagctcc acaagttcga ttaaaagcct atttggcatc atgataaaac aaagtttagc
     2941 aaaatagctt gcttgcataa taggaacaat acaaatgcct ccttgttgtt ccaaaagaat
     3001 taaatcttgg gcgatgtttt tactttcata ggctaaatga tacattttgg tattattttt
     3061 taaatagcta tctagcggtc ctttatcgtt taaattttgc aaaagttcaa atctatactg
     3121 tggaaatgct tcattacaag gaatgataaa ttcgcctctt accccttgtt tttcatctat
     3181 aaattctgat tctttataaa aacctagttt aaaaaaacat tccctttctt tttctaaatt
     3241 tttacaagcc acgcctatat gatgaagggg taaattgagt gttgtattaa gcatttaaaa
     3301 ctactgccat agtgatagca tttttaaatt tcaatgcttt ttctaaacta taatcatttg
     3361 ccataaaaca ttcataagtc ttaagcttta agcctgattt ttctatcaaa tctttaactt
     3421 catcaggatg ggaaaataaa taaatatgat caatagcagg agcattgata ggaatagttg
     3481 caaaaatttc ccctccatcg ctaagaagtt ctttagatct tttaaggaat tcaagaggtt
     3541 tttctacgtg ttctagcact tctccaatca ctatcaaatc agctttttta tcaaaatcat
     3601 aagtaaaaaa atcttgacat aaaaaatcac attttgtaat caatccccct acttgttgtt
     3661 ttaccatttt ttgagtaagt tcgcaacttg ttggagagat atcaagtcca taaaaggcgg
     3721 aaaatttacc acttttaact gctcttgcaa aatattctcc atggccaggg cctatttcaa
     3781 aataagttgt ttttggagta aaatttttta aatattgtga aaagtacttt ctcactttaa
     3841 tatgagctat ccaaacaaaa gaagaaagag ctaggcctat catgtattgt ttcatatagc
     3901 tttcattaaa ataaacttta tccttaactt catcaaagct agaataacga taagccccat
     3961 tttctatgaa aaattttgtt tcttctaaag tatcgttaag gatcaataaa taacaatcgc
     4021 attgttcttc tatgctgata ccatcttgaa tataataaga aattaattta tcaaattcct
     4081 cttcgtcttc ttgtgaaaat tcaatttttt taagatattt agaatggata ggattttttt
     4141 gagcgatggc ttgaaataat ttttcaatat tttctttcat ttttctgcct ttagggtttg
     4201 aattttttct agtaaagcgc tttgagattt taagagactt aaatcttctt tgttaaattt
     4261 gatttcaaat tcttcttcta aactcatgat gatatcaata tgagctaaag aagtccagtt
     4321 cttgcagttt tccatgctta aatttgtatt ttcatctact ttggtttcaa gtatattttc
     4381 taaaatttca taaaattgtt ttt
//
LOCUS       DBBXOW010000102         4356 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.103, whole genome shotgun sequence.
ACCESSION   DBBXOW010000102 DBBXOW010000000
VERSION     DBBXOW010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4356
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.103"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            307..510
                     /locus_tag="ACJE1S_001800"
     CDS             307..510
                     /locus_tag="ACJE1S_001800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807320.1"
                     /translation="MALGLILCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFI
                     TLANWYPKKSGEFIQLFGISRTI"
     gene            659..826
                     /locus_tag="ACJE1S_001801"
     CDS             659..826
                     /locus_tag="ACJE1S_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate transporter"
                     /protein_id="HGG0807321.1"
                     /translation="MLYAVKGSPKNEGLVDITEINEMRGIKTEEIKAIETPNLSSFEI
                     FYHYVLKNKNA"
     gene            1044..1220
                     /locus_tag="ACJE1S_001802"
     CDS             1044..1220
                     /locus_tag="ACJE1S_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807322.1"
                     /translation="MSYVVGASLGTKAIGWAVDYYGSWNAGLIMFLSACILCILCSIL
                     CHFGAKKKEDICKK"
     gene            1208..1984
                     /gene="cdtA"
                     /locus_tag="ACJE1S_001803"
                     /pseudo
     CDS             1208..1984
                     /gene="cdtA"
                     /locus_tag="ACJE1S_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782080.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cc-CdtA"
     gene            2017..2810
                     /gene="cdtB"
                     /locus_tag="ACJE1S_001804"
                     /pseudo
     CDS             2017..2810
                     /gene="cdtB"
                     /locus_tag="ACJE1S_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782078.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cc-CdtB"
     gene            2820..3391
                     /gene="cdtC"
                     /locus_tag="ACJE1S_001805"
                     /pseudo
     CDS             2820..3391
                     /gene="cdtC"
                     /locus_tag="ACJE1S_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782075.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cc-CdtC"
     gene            complement(3445..4320)
                     /gene="zupT"
                     /locus_tag="ACJE1S_001806"
     CDS             complement(3445..4320)
                     /gene="zupT"
                     /locus_tag="ACJE1S_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HGG0807323.1"
                     /translation="MEFTLEQILVAMALTILAGLSTAIGSVIAFFSRNDNLRILSFGL
                     GFSAGVMIYISFMEILPSAFTDFKKYYNSNYGELLALLCFFGGIFLSAIIDKFIPEDV
                     NPHDPKEDLSELKICPLPQKNEKAPAFHAGEPLKKINVKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLSFGVAIAVAVAIHNIPEGMAVSLPIYHATKDKKKAFIYSALSGVA
                     EPMGAIVGAFLILPIMNELTLAITFAVVAGIMVFISFDELLPAAKTYDKAHDSLYGLV
                     LGMAVMAVSLILLNP"
BASE COUNT         1397 a          742 c          816 g         1401 t
ORIGIN      
        1 aaagggaggc ggagcatgca tgtttgattt tttcaaacct aaggcaaaag ctattaaatt
       61 tcctaaagag gaaattttac ctagatatta caaaatgaga acttggagtt taagtggggt
      121 ttttatagga tatatgggat attatcttgt gtgaaataat atcactcttt caactccatt
      181 tatacaaaat caacttaatc tcagtaaatc agacatcgga acaatcacag gctcaatgct
      241 tataacttac gggattagca aaggtgaaat gagcgttata agcgataaag ctgatcctaa
      301 aaatacatgg ctttaggtct tattttatgt gctcttgtaa atgttttact tggtttttca
      361 aattcttttt acgcttatgt aggttttgtt atcgcgcttg gggtttttca aggtatgggg
      421 gtaggtcctt cttttatcac tcttgcaaac tggtatccta aaaagagcgg ggaatttata
      481 cagctatttg gaatatctcg cacaatttag gaggaggtat aatcgctcct atagtgtcgc
      541 tttctggatt tgctttagca gcatttttag gcgtaagctt ggcagatttt atgaaacaca
      601 ttagcatatc aatcattttt atgttcctgc tttttgtgct gtgcttatta gcctttatgt
      661 gctttatgca gtcaaaggaa gtcctaaaaa tgaaggtttg gttgatatta ctgaaatcaa
      721 tgaaatgcga gggattaaaa cagaagaaat caaagctata gaaactccaa atttaagcag
      781 ttttgaaatt ttttatcatt atgtacttaa aaacaaaaat gcttagtatg tggcttggat
      841 ggatactttt gtttatatgg tgcattttgg gcttatttct tggcttccta tttacttgct
      901 agaaacaaaa ggctttaata aagaacaaat gggtattgcc ttttggcttt ttgaataggc
      961 tgctatacct tctactttac ttgcaggata tatttcagat aaaattttta aaggctatag
     1021 aatgcctcct gctataggtg cttatgagtt atgtagtcgg cgcttcactt ggaacaaaag
     1081 ctataggctg ggctgtggat tactatggta gttggaatgc tggtcttatc atgttcctta
     1141 gtgcttgtat actttgtata ctttgctcta tcttgtgtca ttttggtgct aagaaaaaag
     1201 aggatatatg caaaaaataa aattaagcct aatgtttttg attgtaacaa tcattttttc
     1261 agcttgttct tcaaaagaac aacaaatcaa tcctttagga agatcttatg gtaaatttaa
     1321 cgataacgat cctttaaaac ttggttcaaa acctacaccc cctgtcaaac aaaaaacacc
     1381 aagcttggta gaaggtaaaa aatttcccgc cataccactt gtcccacctg taatcactcc
     1441 taataccttt aaaggagata atgccgtcaa aggtccattg ccaaggctaa aatctccaaa
     1501 cgaatttgct tcaaatgctt tatacgaaaa cacaggtatg gtaagtgatt ttgtcactat
     1561 tatgaatcct aatggagcat ctttaacaat ctgggcttta aatcctggca attggatatg
     1621 gggatatagt ttatttgcta gtagaccttt tggagatgca agagcttggc agcttattga
     1681 atttccaaac aatacagtaa tgattaaaaa tgcaaaaaca tttacttgct taaacgccta
     1741 tagaaatggc atcgttcatt atccttgtga tcaaacaaat tttgcgcagt tttagagact
     1801 ttatccgatg actaatggag cttatcaaat tcaaaatttt gccacccaac aatgtataca
     1861 aacacctgtt tcaaatgtaa tggaagaatt taatttgagc ttttataata tttatttaac
     1921 cgattgtttg aaagaaaaag aaaagaattt ggatagacag tggtatatag gcgctcctat
     1981 ttaatttttt cgctatgaaa ggaagataat gaaaaaatag tatttttgat tttaagtttt
     2041 aatgtattat ttgccgcttt agaaaattac aacaccggaa cttggaattt gcaaggctca
     2101 tcagctgcaa ctgaaagcaa atggaatgtt agtataagac aactcataac cggtgcaaat
     2161 cctatggatg ttttagctgt tcaagaagcg ggggttttac ctagtacagc tatgatgact
     2221 cctagacagg tacgacccgt gggcgtgggt attcctatac atgaatacat atggaattta
     2281 ggctctgtat caagacctag ctctgtttat atatattatt ctagagtgga tgtaggagca
     2341 aatcgtgtga atttagctat cgttagcaga gtgcaagcgg atgaagtttt tgttttaccc
     2401 ctccaacagt tgcttcaaga cctattatag gcatacgcat aggcaatgat gcttttttca
     2461 atatacacgc tctagcaagt gggggaaatg acgcaggagc cattgtcgct gctgtggata
     2521 tgttttttag aaatagacat gatattaatt ggatgatttt aggcgatttt aatagagaat
     2581 caggcgcctt agtaaccttg ctagatcctg acttaagagc gcgcactcgc gtagttgttc
     2641 cgccttcttc tacgcaaaca agtggaagaa cgattgatta tgctatcact ggaaattcca
     2701 acactgcagc tttatacaac ccaccaccga tagttgcgat tttagcttta gcaggattaa
     2761 gaaccttttt ggcttcagat cattttcctg taaattttag aagaccttag gagcttaata
     2821 tgaaaaaaat ttttatttta ttttttgccc ttttgagctt tttgaaagca gagcctagct
     2881 tggatgaatt agcagacttt actcctatgt ttgctataag atctttagaa acaggaattt
     2941 ctttaagtcc ttttagaaaa acttcaaaaa ggttagaaga tcaaaattgg tttttaaaag
     3001 agattgtagc aaatgatgag ctaaaagcta gggatatgca cgcaaaagat ttgccttttg
     3061 gctatgttca gtttataagc cctaggggcg atgatatatg cctagctgtt ttaagtgaaa
     3121 aaagttttgg caccaaatct tgcaaacaag atttgcaaga tggaacaatg cagactattt
     3181 ttctatcata ctaatgacaa atggttctat acaaattaga tctttaacca atggtggcaa
     3241 tcaatgcatg agcacttttc ctgactctag tatcgccata gaaaatcgct ttggtttagg
     3301 agaatgcctt ttggatcgtt ctatcgtaac tgtattaagc aaacttttct tcttctcccc
     3361 tgctataatc gaagcaagtg caatttacta acacttttct aacaaaacca agctttcatg
     3421 gcttggttta taacttgatt taactcaagg atttaacaaa atcaaactca ccgccattac
     3481 cgccattcct aaaacaagtc cataaaggct atcgtgggct ttatcataag tctttgccgc
     3541 aggcaataac tcatcaaaag agataaacac catgatccca gccactacag caaaggtgat
     3601 ggctaaagta agctcattca tgataggcaa gatcaaaaac gctcccacaa tcgctcccat
     3661 aggctcggct acacccgaaa gtgcagagta aataaaggct tttttcttat cctttgtagc
     3721 atgataaatc ggtaaagaaa ctgccattcc ttcagggata ttgtgtatag ctacagccac
     3781 agcgatagcc acaccaaagc taagattatc aaggcttgag ataaaagtcg caaaaccctc
     3841 aggaaaatta tgtatcgcta tggcaagtgc agtaaatatc cctgttcttt tcaatgcctt
     3901 tacattgatc ttttttaaag gttcacctgc atgaaaagcg ggtgcttttt catttttttg
     3961 aggcaaaggg caaattttaa gctcgcttag atcttcttta ggatcgtgag ggttgacatc
     4021 ttcggggata aatttatcga tgatggctga taaaaaaatt ccaccgaaaa aacacaaaag
     4081 tgctaaaagt tctccatagt ttgaattata gtatttttta aaatctgtaa aagcagaggg
     4141 taaaatttcc ataaaagaga tatatatcat cactccagca gaaaaaccaa ggccaaaaga
     4201 aagaattcta agattgtcat ttctgctaaa aaatgctatc acagaaccaa tagcggttga
     4261 aagtccggca aggatggtca aagccatcgc tactaaaatt tgttctaatg taaattccat
     4321 aaaaagcatt atagcaaaaa tcagtaaata aatttt
//
LOCUS       DBBXOW010000103         4282 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.104, whole genome shotgun sequence.
ACCESSION   DBBXOW010000103 DBBXOW010000000
VERSION     DBBXOW010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4282
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.104"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            18..932
                     /locus_tag="ACJE1S_001807"
     CDS             18..932
                     /locus_tag="ACJE1S_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HGG0807324.1"
                     /translation="MSTQKIAIDIGYGDTKVFFNGKTLKFPSAVSEVRQAQVDLSETK
                     TDVYTYNGTQYRVGEKAITNAIATRGFNFLNKYSPLLVFHALNQTGVDLSQPIEIATG
                     LSILNYHSANDFKEVIENFTINKIHLEPSVFLFAQGQGIFLEYPNHEDSLVGVIDIGY
                     NTLDFLVFEDKEPRSDLCFANQGGANRIIVDLQKILTREFRVDFSEQEAKKVFLNKEV
                     KIAGKVIDFKDEIKSMTERYIDFVLDEFANKCGDLMMRSDGVIIGGGGAYFLDQEYIK
                     ETHPNIILAPSPHEFSNVRGYYKGVFEN"
     gene            949..1443
                     /locus_tag="ACJE1S_001808"
     CDS             949..1443
                     /locus_tag="ACJE1S_001808"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807325.1"
                     /translation="MLSLILNMDVRYFLFILIFIAVICFLLWKSFEEELNFTSRMILI
                     CLSLIFIFASYKFYDAFYYEENSAKKEAVQNYIQTIENKIDPRFKDKIKEQFSSIPNT
                     FGFNLCYENNYTGETCLNYLFYFENKVKDEVKKAREEFFKSRDINNNINDNFNKGEKN
                     ESRN"
     gene            1427..1648
                     /locus_tag="ACJE1S_001809"
     CDS             1427..1648
                     /locus_tag="ACJE1S_001809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807326.1"
                     /translation="MNQEIKNVEVPMNENTYKKWQRVPKDMQEKAIEAALTMLWRDEV
                     FFYTFFNGHIEEGENRIEAKREEKVEFPY"
     gene            1703..1978
                     /locus_tag="ACJE1S_001810"
     CDS             1703..1978
                     /locus_tag="ACJE1S_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807327.1"
                     /translation="MKTFNTDDYIAIVKIIPFSERRTCFCDFAKQNEIKIEKINWKNY
                     INKEDLKKVYAIYKNKPHERNFFHEKKLIVKAFEDVEKFLRSENEIK"
     gene            1965..2384
                     /locus_tag="ACJE1S_001811"
     CDS             1965..2384
                     /locus_tag="ACJE1S_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YopX family protein"
                     /protein_id="HGG0807328.1"
                     /translation="MKLSDFDFRIWNNNSKTYEAGSIIESLGFITSVFNQLTYEKPTI
                     DYEIELWTGLYDKNDKKIYEGDVIKYVYIFKHELLDKGMIKKLPKKVSIGCIGIDNFL
                     GFKILKNKELQCFMKDIANIEIIGNIHENKELLNVRL"
     gene            2371..2787
                     /locus_tag="ACJE1S_001812"
     CDS             2371..2787
                     /locus_tag="ACJE1S_001812"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807329.1"
                     /translation="MLDYNSWQEAQAKVEPLRKQVMEAILKDERFNATIPSKIGDRDN
                     LLRVDIKNTIFDLIFDLGNFHIEASFNLFSLGFLEHSSNVIIFQGDYDLYEGNVKRIV
                     DDLYFELSREMPNIRRALKDLIKDCKRVLKLKVNDK"
     gene            2830..3039
                     /locus_tag="ACJE1S_001813"
     CDS             2830..3039
                     /locus_tag="ACJE1S_001813"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807330.1"
                     /translation="MKISELIKSLEDKKKELGDIEVVIEASYPDSHYNYLSYNIEICK
                     EENVVAYINDDNKGRKIFDTCLLLF"
     gene            3051..3716
                     /locus_tag="ACJE1S_001814"
     CDS             3051..3716
                     /locus_tag="ACJE1S_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807331.1"
                     /translation="MTEIQFNEIKERLADWRSERGLTYENQREEFLGNVFEKVSEYFR
                     AKDDLERVEALCDIAVFFFNAFELKFGAFSNIKRAGMIHLIDHFTSYFLERNNKTVYN
                     NSKDEDFEYLLIVEIEILVKNLGFDFYKCMLEKIKEIESRIGFYDERLNRFVEKIGAY
                     YEREAFDLAINDFKLTNVPNKYFLDKEGSDFWCIRIEDNNGDYEDYYIRKWYKADYKS
                     YRL"
     gene            3718..3909
                     /locus_tag="ACJE1S_001815"
     CDS             3718..3909
                     /locus_tag="ACJE1S_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807332.1"
                     /translation="MLNIILVLLFVLFFILMFFNYKYQKAQVELLEQNKKTLELNIKI
                     LELNIKKIELLEKRIKEKQ"
     gene            3906..4256
                     /locus_tag="ACJE1S_001816"
     CDS             3906..4256
                     /locus_tag="ACJE1S_001816"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807333.1"
                     /translation="MKDNENKSTRVTFFINDEKVASILEQLPKGVRSMFIEQAILEYS
                     SKKPKVEFFFHGITKTRRINKVKQQDKNSEENNLQSKISKENNVQANINELKNDNKAQ
                     KKSGGMMFNFGNKE"
BASE COUNT         1744 a          393 c          739 g         1406 t
ORIGIN      
        1 aaaaaaagga gtaaataatg tcaacacaaa aaattgccat tgatatagga tatggagata
       61 caaaagtatt cttcaatgga aaaactttaa aatttccatc agctgtttct gaggtgagac
      121 aagctcaagt agatttatct gaaacaaaaa cagatgtata tacctacaat ggaactcaat
      181 atagagtagg ggaaaaagca attacaaatg ctatagcaac taggggtttt aattttttaa
      241 ataaatactc tcctttgtta gtttttcatg ctcttaatca aacaggagta gatttatcac
      301 aacctattga aatagcaaca ggactttcta ttttaaatta tcatagtgca aatgatttta
      361 aagaagtgat agaaaatttt acaattaata agattcatct tgaaccaagt gtatttttat
      421 ttgcacaagg gcagggtata tttttagaat atccaaatca tgaagatagt cttgtgggtg
      481 taattgatat aggctataac actttagact ttttggtttt tgaagataaa gagccaagat
      541 cagatctttg ttttgcaaat caaggcggag caaatcgtat tatagtagat ttacaaaaaa
      601 tattaacaag agagtttaga gtagatttta gtgagcaaga agctaagaaa gtattcttaa
      661 ataaggaagt taaaattgct ggtaaagtaa ttgatttcaa agatgaaatt aaatccatga
      721 ctgaaagata tattgatttt gtattagatg aatttgctaa taagtgtggt gatttgatga
      781 tgcgttctga tggcgttatt ataggcggag gcggtgctta tttcttagat caagaatata
      841 taaaagaaac gcacccaaat attattttag cacctagtcc gcatgaattt tcaaatgtta
      901 gaggttatta taaaggtgtt tttgaaaact aaggtaagga gatagataat gctttcttta
      961 attcttaata tggatgttag atattttctt tttattctaa tttttatagc tgtaatatgt
     1021 tttcttctat ggaaatcttt tgaagaagaa ttaaacttta caagcagaat gattttaata
     1081 tgtttatcgc ttattttcat ttttgcgagt tataagtttt atgatgcttt ttattatgaa
     1141 gaaaatagtg ccaaaaaaga agctgttcaa aactatatac aaactataga aaacaaaatc
     1201 gatccaagat ttaaagataa aatcaaagaa caatttagtt ctatacctaa tacttttggt
     1261 tttaatttat gctatgagaa taattataca ggtgaaactt gtttaaacta tcttttttat
     1321 tttgaaaata aggtcaaaga tgaagttaaa aaagctaggg aagagttttt taaaagtaga
     1381 gatattaaca ataatatcaa tgataatttt aacaaaggag aaaaaaatga atcaagaaat
     1441 taaaaatgta gaagttccaa tgaatgagaa tacttacaag aaatggcaaa gagttccaaa
     1501 agacatgcaa gaaaaagcta ttgaagctgc tcttacaatg ttatggagag atgaagtatt
     1561 tttctatact ttttttaatg gacacattga agaaggcgag aatagaatag aagcaaagcg
     1621 tgaagaaaaa gttgaatttc cttattagga tattcaacgc atgaatcact ttaggcacat
     1681 attataatac agaagagaat atatgaaaac ttttaatact gatgattata ttgcgattgt
     1741 aaaaatcata ccatttagtg aaagaagaac ttgtttttgt gattttgcaa aacagaatga
     1801 aataaaaatt gagaagataa attggaaaaa ttacataaac aaagaagatc ttaaaaaagt
     1861 ttatgcaatt tataaaaaca aaccacatga aagaaatttc tttcatgaaa aaaagcttat
     1921 tgtgaaagct tttgaagatg ttgaaaaatt tttaaggagt gaaaatgaaa ttaagtgatt
     1981 ttgattttag gatttggaac aataattcta aaacctatga agcaggaagt ataatagagt
     2041 cgttaggttt tataactagc gtatttaatc aattaaccta tgaaaaacct actatagatt
     2101 atgaaattga gctatggact gggctgtatg ataaaaatga taaaaagatt tatgaagggg
     2161 atgttattaa atatgtttat atatttaaac atgagcttct ggataaaggt atgattaaaa
     2221 aattacctaa aaaagtaagc ataggttgta taggaattga taattttctt ggttttaaaa
     2281 tattgaaaaa taaagaactt caatgcttta tgaaagatat tgcaaatatc gaaatcatag
     2341 gtaatatcca tgaaaacaag gagttattaa atgttagatt ataattcttg gcaagaagca
     2401 caagcaaaag tagaaccact tagaaaacaa gttatggagg cgattttaaa agatgaaaga
     2461 tttaacgcaa ctattcctag taaaatagga gatagagata atcttttaag ggttgatatt
     2521 aagaatacca tttttgattt aatttttgat ttaggaaatt ttcatattga agctagtttc
     2581 aatttgtttt cacttggttt tcttgagcat agtagtaatg ttattatttt tcaaggagat
     2641 tatgacttat atgaaggaaa tgtaaaaagg attgttgatg atttatattt tgagttatca
     2701 agagaaatgc caaatataag aagggcatta aaagatttaa taaaagattg caaaagagtt
     2761 ttaaagctta aagttaatga taaataatga atatcatata aaatttagaa aaaacaatta
     2821 ggattaaaaa tgaaaattag cgaacttata aaatctttgg aagacaaaaa gaaggagttg
     2881 ggagatattg aagttgtgat agaggcaagt tatcctgatt ctcattacaa ttatttaagc
     2941 tataacattg aaatttgcaa agaggaaaac gttgtggcgt atattaatga tgataataaa
     3001 ggcagaaaaa tattcgatac ttgcttatta ttgttttaaa aggattgaaa atgacagaaa
     3061 tacaatttaa tgaaattaaa gaaagattag ccgattggag aagtgaaaga ggtttaacct
     3121 atgaaaatca aagagaagag tttttgggta atgtttttga aaaagtaagc gagtatttta
     3181 gagcaaaaga tgatttagaa agagttgaag ctttgtgtga tattgcagta tttttcttta
     3241 atgcttttga attaaaattt ggagcatttt caaatataaa aagagcaggt atgattcatt
     3301 tgattgatca ttttacaagc tatttcttag aacgcaataa taagacagtt tataataata
     3361 gcaaagatga agattttgaa tatttattaa ttgttgagat agagatttta gttaaaaact
     3421 taggttttga cttctataaa tgtatgctag aaaaaattaa agagattgaa agtcgtatag
     3481 ggttttatga tgagagatta aatagatttg tcgaaaaaat aggagcttat tatgaaagag
     3541 aggcttttga tttagcaatt aatgatttta aattaacaaa tgtgccaaat aaatattttt
     3601 tagacaaaga aggtagtgat ttttggtgca taagaatcga agataataat ggagattatg
     3661 aagattatta tattagaaaa tggtataaag ctgattataa aagttacagg ttataaaatg
     3721 ttaaatatca tcttagtttt actttttgta ttatttttca ttctgatgtt ttttaactat
     3781 aaatatcaaa aagcacaagt tgagctttta gaacaaaaca aaaaaacatt agaattaaat
     3841 attaaaatct tggaattaaa tattaaaaaa attgagcttt tagaaaaaag aattaaggag
     3901 aaacaatgaa agataatgaa aataaatcaa caagagtaac tttttttata aatgatgaaa
     3961 aagttgcttc gattttagaa caattaccga aaggcgttag gagcatgttt atcgaacaag
     4021 ctattttaga atattcttca aaaaaaccta aagtagaatt cttttttcat gggattacca
     4081 agacaagaag aataaataag gtaaaacagc aagataaaaa ctctgaagag aataatttac
     4141 aatctaaaat ttcaaaagaa aacaatgttc aagctaatat aaatgagctt aaaaatgata
     4201 ataaggctca gaaaaaaagc ggtggaatga tgttcaattt tggcaacaaa gagtaatatt
     4261 aattccactt gtcctaaatc ta
//
LOCUS       DBBXOW010000104         4062 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.105, whole genome shotgun sequence.
ACCESSION   DBBXOW010000104 DBBXOW010000000
VERSION     DBBXOW010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4062)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4062)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4062
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.105"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(32..742)
                     /locus_tag="ACJE1S_001817"
     CDS             complement(32..742)
                     /locus_tag="ACJE1S_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HGG0807334.1"
                     /translation="MKKTNIIDFGLMGKQISALFYLLGHEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNNIVFS
                     NSSSLSMDDLNCDFIHFFNTIYIKLIELCDSNLERFTPLKDLKKLGFHIICSKGNRGA
                     LANLLLFNEISSFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIGIELCNKICKN
                     LKEDDENFYHPKIFKKAL"
     gene            complement(762..1356)
                     /locus_tag="ACJE1S_001818"
                     /pseudo
     CDS             complement(762..1356)
                     /locus_tag="ACJE1S_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910212.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            complement(1467..2621)
                     /gene="legC"
                     /locus_tag="ACJE1S_001819"
     CDS             complement(1467..2621)
                     /gene="legC"
                     /locus_tag="ACJE1S_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HGG0807335.1"
                     /translation="MFEKEISFIKSLFNKESIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVTRFEEALKEKTKTRFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKLIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKDENLRNIFLEECLK
                     NNIFVRPIWKSLPSLKAFQNCQSNELINTKNLEKRLVNLPSSVRIANKKE"
     gene            complement(2614..3585)
                     /gene="legB"
                     /locus_tag="ACJE1S_001820"
     CDS             complement(2614..3585)
                     /gene="legB"
                     /locus_tag="ACJE1S_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HGG0807336.1"
                     /translation="MRNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSPFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
     gene            complement(3582..>4062)
                     /locus_tag="ACJE1S_001821"
     CDS             complement(3582..>4062)
                     /locus_tag="ACJE1S_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF115 domain-containing protein"
                     /protein_id="HGG0807337.1"
                     /translation="PLSLNKQNEFLLKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYL
                     SLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLTQFELNLARIYVLNPKTK
                     EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR"
BASE COUNT         1277 a          658 c          554 g         1573 t
ORIGIN      
        1 tttgttttat ttttctacct aaaattcctt tttataaggc ctttttaaag atttttggat
       61 ggtaaaaatt ttcatcatct tcttttaaat tcttacaaat tttattacaa agttctatgc
      121 ctatagtgtc gataatattt aacaaatttc ttttttcata aagcaaatca taaactgttt
      181 gacattcttt gaaattataa tcgtattttt ctataatttt aaaaaatgat gaaatttcat
      241 tgaacaaaag taaatttgcc aaagctcctc gattgccttt actgcaaatg atatgaaatc
      301 ctaatttttt aagatctttc aatggggtaa atcgttctaa attagaatca caaagttcta
      361 ttaatttgat ataaatagta ttgaaaaaat gtataaaatc gcagtttaaa tcatccatac
      421 tcaaagaact tgaattcgaa aaaactatat tattattgtc tctaagaatt tgcatgattt
      481 ctttttttaa atttaaatct tcatttaagc tttctatagt caagctattt ttaagatctt
      541 ctatatgttg gtaaatgttt atttttccgg cgttaaaatt agaaaaatct atttttcttt
      601 gtagaagttt tatttgtttt tcaaattcgt atatattgag cttgctttta ttataaacac
      661 ctatttcatg gcctaacaaa taaaataaag cacttatttg cttacccatt aaaccaaagt
      721 ctatgatatt agtttttttc attgtttttt tcttgtttta attatatttt tatgaaaaat
      781 aagttgattg gatgtgtagt tttgctaata atactacctg cgcttactat gcagttatct
      841 tctaagttta cgcaaggcaa cgggctaact ctagtagcta aaaaacaatt ttttcctatg
      901 cttgaatttc cattaagtgt agcataaggg cttaaaatac ttccttctcc taccttacaa
      961 ccatgagcta tgcttgaata aatattacaa agcacaaaat ctcctatatt tgaattagca
     1021 ttaatggtta caaaaggaca cactataacc ccttgtccta ttttagcttc ttttgaaaca
     1081 aaagattgag gatgtataaa agtgataaaa ttacatgatt tttttgaaag ttttacaagg
     1141 atttttttct taaattgatt tgtcctacac ctaaagcaaa agatgctttt tgaatcaact
     1201 ttttatcgaa gttatcttca ttgcctagat attttaagtc aaaaaaatat tttcttgtat
     1261 atcaatatag cctataattt cgtaatttgc atcttttaaa taagaataaa gctctctagc
     1321 aaagccaccc gctcctatga tgatgacatt tttcacgcac ttctcctaaa agaagaagta
     1381 aaaaaatcaa atcccccccc cccgctactc tcatattttt tcttattaaa atttttttaa
     1441 tgctttgaat taaattttgc aacgcatcat tcctttttat ttgctattct aacgctacta
     1501 ggtaaattaa ccaaacgttt ttctaaattt ttagtgttta taagctcatt gctttgacag
     1561 ttttgaaaag cttttaaact cggtaagctt ttccatatag gacggacgaa aatattattt
     1621 ttcaagcatt cttctaaaaa gatatttctt aaattttcat ctttaaaaag caaggtattg
     1681 agccaaaaat tgcttttttc attgcttttt tcatcgataa atttacattt atcgtgattt
     1741 ttaaaaaaat ccttgtaaat tttagcaagt tctcttttgt tttctaaaaa aagttctaaa
     1801 ttttcaagtc ctgcaagcaa gattgctgcg tttatattgc aaagacggta attataagct
     1861 atcctatcat gatcgtattc gtaaggatgg gggattttag ctgtggtgct aaggtgtctt
     1921 gcaagtttag ctaaattttc atcatcgctt aatatcgccc caccgcatcc acctgtgatg
     1981 attttattgc cattaaaact taaaattcca cactttccaa aagtgcctaa ggccttgttt
     2041 tcataggtgc ttcctaaggc ttctgcggca tcttcaatta aaaggatgtg gtatttttca
     2101 caaagttctt tgatggcttt tatatgagcg cttaaaccaa aggtgtgcat aataacacaa
     2161 gctttgatga gtttgtgtgt ggttttgtta tagctaagat tatctttttg ataagtttga
     2221 ttttctaaaa aatgctctaa agccttagga cttaaactta gagtgttttc atctatatct
     2281 aaaaaaacgg gttttgcacc tgtataagcg atagcattgg ccgtagcgac aaagcttatg
     2341 ctttgagtga tgacttcgca gttttcatcg ataccattag ctagtaaagc gatatgaagg
     2401 gctgctgtgc ctgtatttgt agcgatgaca aagcgtgttt tggttttttc ttttaaagct
     2461 tcttcaaaac gcgttacaaa ttctcccacg cttgaaacaa aaccgctatc aatgcactct
     2521 aaaagatatt ttttctcatt gcctataaaa caaggctcat gtagggcgat actttcttta
     2581 ttaaaaagac tttttataaa agaaatttct ttttcaaaca ttataaagct cacttttata
     2641 attttctaaa ttttctttaa aatactctat gctttgtctc aagccttctt ctagacttat
     2701 tttgctttgc caatttgtag cttttttaag cttgtttgca tcgcaacaaa gtctaaaaac
     2761 ttcgctattt ttaggacgca atctttgttc atcttggatg atttttactt tagaatctaa
     2821 aattttttgt atgagatcaa gtacttcttg catggagtat tccactcctg agcctatatt
     2881 ataaacttct ccaaaatgtt ttaaatttaa aagagagata aaaccctcgc aagtatctag
     2941 cacaaaattt aaatcccttt tagggcttaa atctcctagt ttgatttcct ttgctccact
     3001 taaaatttgt gtgatgatgg taggtatgat agcccttgcg ctttgtcttg gtccataggt
     3061 gttaaaaggg cgtgcaatat tgacatttaa attaaaagaa ttataataac tcagcgccat
     3121 catatctgca gcgattttgc ttgcagaata agggctttga ggttgcaaag ggtgtttttc
     3181 atcgataggc acataaaagg ccgtgccata aacttcactt gttgaggtgt ggataaaatg
     3241 cgaaatttcg ttttttttag ctgcttcgag catatttaaa gtgccattga cattggtatc
     3301 cacatagctt tgtggggctg tgtaggagta ggggatagcg attaaagcgc caagatgaaa
     3361 gatcgcatct atatttttgg tgattttttc gcaaaaaaaa ctgtctctta aatctccact
     3421 tataacttcc atgtctttta aaaaaggact tttttctaaa tgtccccaaa aattaaaaga
     3481 attatactga cttaaagctc tgactttaaa accttttttg accaaacttt cacaaagatg
     3541 agaacctata aaaccatcag cacctgtaac taaaatattt ctcaccttct caccctttcc
     3601 atccatttat ctaattttct ttctttaagt ttttcttcta aaggaagtat attttttatc
     3661 aaagcatttt cttgtgcttt aatatgtcca taaactaatt ccataaattc taaatgttct
     3721 tttatccaaa gaatactttt attaaaagca tcttctttgg ttttaggatt taagacataa
     3781 attctagcaa gattaagttc aaattgagtt agcaaaggac ttaaaatttc atataaatct
     3841 tgcatttgtt ttatatcttc aagtttattt ttaaactcat ctattttttc aatagctaaa
     3901 tttaaatatt cttctttttc atttaaactc aaatatacac tttgtatttt ttcaaaatca
     3961 ttgctgagta ttttactaaa atctctacaa tgttcaatac tttgacaaac tttataataa
     4021 gccttaagta aaaactcatt ttgtttattt aaacttaaag gt
//
LOCUS       DBBXOW010000105         4033 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.106, whole genome shotgun sequence.
ACCESSION   DBBXOW010000105 DBBXOW010000000
VERSION     DBBXOW010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4033
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.106"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            16..588
                     /locus_tag="ACJE1S_001822"
     CDS             16..588
                     /locus_tag="ACJE1S_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HGG0807338.1"
                     /translation="MKIFISFFVLATCLWAKEIAYTDEVVSLYLNKDDTKVTGRLLPT
                     NAFEILKSDKDRVLIKVDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQTSAGKN
                     GKWDKVSLEIWADKKDFAKDNKEMLSRAKNLFAENCGICHALHPEKEFTANAWPAVFR
                     SMADRTGIDKKDRWLVIQYLQKNAKDFKAK"
     gene            600..3116
                     /locus_tag="ACJE1S_001823"
     CDS             600..3116
                     /locus_tag="ACJE1S_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HGG0807339.1"
                     /translation="MLDRRRFLKIGAALSTLPLIPTLGAGKSAEATKVSLGLVKNGEV
                     ITAAHWGILKLTIKDGKIIKSEPWEKITKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAIKLIAKELKKTREAKGTSAIFGGSYGWKSSGNMQN
                     ARILLHRFLNVTGGFVGATGDYSTGASQIIMPYVVGSIEVYEQQTSWENILEHSKYVV
                     IWGADPISTLRIAWTASEQRGLAYFEKLKEKKIKVICIDPVKTDTAQFLNAKWVAPRP
                     NTDVALMMGMASHLIAQNKVNYEFLENYTTGFDKFKDYLDGKEDGIKKDVKWASKICG
                     IDEKMIKNLAEIFYDNPTMIMSGWGMQRAHYGEQPHWMLVTLASMIGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGINAESLGIWKNGKFQGLAKSNQASGGAEWLQNAASYSFP
                     VARIADALLNPGKTIDHNGSKITYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIVMPATSSYERDDITMSGDYSNMHIVPMKQAVEPVGESKDDYII
                     FADICKVYGQNVYNAYTEKGKKAKDFIKEYYDSALKQTQSFGEAFATPMPNFEEFWAK
                     NEPITFEATAESLEWTRFSEFIEDPILNALGTESGLIEIYSQTIKNYNYDDCKAHPTW
                     FEPIEWLGNATKEAPFHLLTNHPKDRLHSQLCHTSLRDTYAIKDREPILINTKDAKKL
                     GVKNGDVVRVFNKRGEVLAGVIISDDIIQGVVRLCEGAWYDPDENGLCKCGNANVLTI
                     DIPSSKLANGNIAHTGLVNIEKFTGTLPALNAFSAPKGAI"
     gene            3286..3633
                     /locus_tag="ACJE1S_001824"
     CDS             3286..3633
                     /locus_tag="ACJE1S_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002845970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807340.1"
                     /translation="MQLSIRKKMLMLGAICFISMLATFAIFYYNNLKGSQKIAQTTKN
                     LINKEIDIKVELLTKSMAIALGDLIKDVDDEKEKIKISLPQLKILDLKRIKADTFLSI
                     KKQPSKPILLEKT"
     gene            3630..>4033
                     /locus_tag="ACJE1S_001825"
     CDS             3630..>4033
                     /locus_tag="ACJE1S_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HGG0807341.1"
                     /translation="MIGTDLHNAKDENGIFYVRELYQRALDKGGFVTFHFTKPQPNGE
                     NTIAEKTAYSYLIPNADDLWISTGVYKDTLEPYIDRSLEELLSFFSKSFFKTVLFSII
                     FILIIIPFIFIFYRNLIVGVQGIDANITSFFN"
BASE COUNT         1457 a          610 c          754 g         1212 t
ORIGIN      
        1 tatcaaagat tgacaatgaa aattttcatt tctttttttg tcttggcgac atgtttatgg
       61 gctaaggaaa tagcctatac agatgaagtt gtatcgcttt atcttaacaa agatgatact
      121 aaagttacag gaaggctttt acctacaaat gcttttgaaa ttttaaaaag tgataaagat
      181 agggttttaa taaaagttga tggatatgta aatcccaaag ctccttctgt gatttatttt
      241 aacgattccc aaagaatcat tgttgctgct ttttctaaaa atacaaaact caatttctca
      301 caaacaagtg cgggaaaaaa tggtaaatgg gataaggtga gccttgaaat ttgggcagat
      361 aaaaaagatt ttgctaaaga caataaagaa atgttaagtc gtgcaaaaaa tctttttgct
      421 gaaaattgcg gaatttgcca tgccttacat cctgaaaaag aatttaccgc taatgcttgg
      481 cctgctgttt ttcgctctat ggcagataga acagggattg ataaaaaaga tagatggcta
      541 gtaatacaat atttacaaaa aaacgcaaaa gattttaaag caaaataaaa ggaaaggcta
      601 tgttagatag aagaagattt ttaaaaattg gtgcagcatt aagtacttta ccccttattc
      661 cgactttagg tgcaggaaaa agtgcagaag ctacaaaagt aagtcttgga cttgtaaaaa
      721 acggtgaagt catcacggca gctcattggg gaattttaaa gcttaccata aaagatggta
      781 aaatcattaa aagtgaacct tgggaaaaaa tcactaagat ggataatcct ttgcagcatt
      841 acaccgcaga tatggtttat aaatctcgcg taaaatatcc ttatgtacgc aaatcctatc
      901 ttgaaaaccc tgacaatcct aaacctgaac ttcgtggaaa agatgaattt gttcgtgtaa
      961 gttatgatga agctataaaa cttatcgcaa aagaactcaa aaaaacaaga gaagctaagg
     1021 gtacaagtgc tatttttggt ggaagttatg gttggaaatc aagtggtaat atgcaaaatg
     1081 ctagaatatt attacataga tttttaaatg ttacaggtgg ttttgttggc gctactggag
     1141 actattctac aggggcttct cagattatta tgccttatgt ggttggttcc attgaagttt
     1201 atgaacagca aacctcatgg gaaaatattt tagagcattc taaatatgtc gttatttggg
     1261 gcgctgaccc gatttctact ttacgcattg cttggactgc atcagaacaa agaggtttgg
     1321 cttattttga aaaacttaaa gaaaagaaaa taaaagttat ttgcattgat cctgtaaaaa
     1381 ccgatacagc tcaattttta aatgcaaaat gggtagcacc acgcccaaat accgatgtag
     1441 ctttgatgat gggtatggca agtcatttga ttgctcaaaa taaagttaat tatgaatttt
     1501 tagaaaatta tactactggc tttgataaat ttaaagatta tcttgatgga aaagaagacg
     1561 gtatcaaaaa agatgttaaa tgggcaagca aaatttgtgg tatcgatgaa aagatgatta
     1621 agaatttagc tgaaattttc tacgataatc ctactatgat tatgagtggt tggggtatgc
     1681 aaagagctca ttatggcgag caaccacact ggatgcttgt aactttagct tctatgatag
     1741 gacaaatcgg taccaaagga ggtggttttg ggcttagtta ccattatagc aatggaggtg
     1801 tgccaacttg caaaggtggg gtaatcggcg gaatcaatgc tgaaagctta ggaatttgga
     1861 aaaatggtaa atttcaaggt ttggctaaat caaaccaagc aagcggtggc gcagaatggc
     1921 ttcaaaatgc tgcaagttat tctttccctg tagcaagaat agcagatgct ttacttaacc
     1981 ctggcaaaac catagatcac aatggtagca aaattactta tcctgatatt gattttatct
     2041 actgggtagg tggaaatccg ctcgtgcatc atcaagatac caataccaat gtaaaagcat
     2101 ggcgaaaacc tcgtactgta gtagttaatg aaatttattg gactccaaca gcgaaaatgg
     2161 cagatattgt aatgcctgca acttcatctt atgaaagaga tgacattact atgagtgggg
     2221 attattctaa tatgcatata gtgccaatga aacaagccgt tgaaccggtg ggtgaaagca
     2281 aagatgatta tataattttt gctgatattt gcaaagttta tggtcaaaat gtatacaatg
     2341 cttatacaga aaagggcaaa aaagcaaaag acttcatcaa agaatattat gatagtgcct
     2401 taaaacaaac tcaaagcttt ggtgaggctt ttgctactcc tatgccaaat tttgaagaat
     2461 tttgggcaaa aaacgaacct attacttttg aagccactgc agaaagctta gaatggacac
     2521 gtttttcaga atttatagaa gatccaatcc ttaatgcttt aggcacagaa tcaggcttga
     2581 ttgaaattta ctctcaaaca atcaaaaatt acaattatga tgattgcaaa gcgcatccta
     2641 cttggtttga accgattgaa tggcttggaa atgctaccaa agaagcacct tttcatctac
     2701 tcacgaacca tccaaaagat cgcttgcatt ctcagctttg ccacacaagt ttaagagata
     2761 cttatgcgat aaaagataga gagccgattt tgataaatac caaagatgca aaaaaacttg
     2821 gtgttaaaaa tggtgatgtt gtaagagtct ttaataaacg cggagaggtc ttagcaggtg
     2881 taattataag tgatgatatc atacaaggcg tagtaagact atgtgaaggc gcttggtatg
     2941 atcctgacga aaatgggctt tgcaaatgtg gaaatgcaaa tgtcttaacc atagatattc
     3001 caagctcaaa acttgcaaat ggtaatatag cgcatacagg acttgtaaat atagaaaaat
     3061 ttacaggcac acttccagct cttaatgctt ttagcgctcc aaaaggtgct atttaactct
     3121 atcttaaaga aagtcttagg actttcttta gcttaaaaac acataaaagc aatctaatcc
     3181 aaaaaattaa aacatctaaa tcaaaatgac aattgtttca aatttaatat gaattaaaac
     3241 ctttataggc aaaatatgcg ctcaaaaatc agttcaggag tgtttatgca attatcaatt
     3301 cgtaaaaaaa tgcttatgtt gggagccatc tgttttattt caatgttggc aacttttgca
     3361 attttttatt acaacaatct aaaaggaagt caaaaaattg cccaaacaac aaaaaattta
     3421 atcaacaagg aaatagacat taaagttgaa cttttaacca aatcaatggc tattgcttta
     3481 ggggatttaa tcaaagatgt tgatgatgaa aaagaaaaaa taaaaatatc gctaccgcaa
     3541 ttgaaaattt tagatttgaa gaggattaaa gcggatactt ttttgtctat caaaaaacaa
     3601 ccgtcaaagc ccatcctgtt agaaaagact tgattggcac agatttacat aatgcaaaag
     3661 atgaaaatgg aatcttttat gttcgagaat tataccaaag agcattagat aaaggagggt
     3721 ttgttacctt tcactttaca aaacctcaac ccaatggaga aaatacaatt gcagaaaaaa
     3781 cagcatatag ctatttaata cctaacgcag atgatttatg gatttccact ggtgtgtaca
     3841 aagacacttt agaaccttat atcgatagaa gtttggaaga attattatca tttttttcca
     3901 aaagcttttt caagactgta ttgttttcta taatctttat attaatcatt ataccattta
     3961 tttttatatt ctatagaaat cttattgttg gagttcaagg aatagatgca aatatcacct
     4021 ctttcttcaa ctt
//
LOCUS       DBBXOW010000106         3835 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.107, whole genome shotgun sequence.
ACCESSION   DBBXOW010000106 DBBXOW010000000
VERSION     DBBXOW010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3835
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.107"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(11..1648)
                     /locus_tag="ACJE1S_001826"
     CDS             complement(11..1648)
                     /locus_tag="ACJE1S_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002803230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HGG0807342.1"
                     /translation="MNRLGISARLYFSFALIIFIMLFIAVFSIAKVNFLDKTLTTATG
                     ENALISRQAINFRGSIHDRSILIRDVVLVQDQEDLRKTLAEIQKLEKDYEEAELILND
                     IIAKGGGDSNVRSMMEDIAKTKKNTVQIYQKIIDAVVKENDIQSATKMVLDSARPEFI
                     LWLAQTNKLIDYKELANQELTQIALLESKSFQFIMMSIIIIALIISMVIAYLIVRYIK
                     KSVGGEPRDVNRIITEVANGNLTQPIHTEYKQSILYSISRMQNQLRNIVQKMITISNE
                     LNHKADLVVGRISETEKAVIFQGETSRESALKIREISQKTQNVSKMALETEENSKNTT
                     QVCQNNKKYAEDTASQMEYIASNSSRVSQQIALLSEHAKNIGTSTELISEITDQTNLL
                     ALNAAIEAARAGDVGRGFAVVADEIRKLAEKTGGATDQIAIINKQIQEETIATVGVIE
                     ESIPLISQGKSLSEEVRDSVDLIYKQANDSLFKAQEVNQEVAAQVKLMEEIEEKIITV
                     ADISSKTQQAVSENKNAMTELKNISDNLQAEIAIFKL"
     gene            complement(1715..2482)
                     /locus_tag="ACJE1S_001827"
     CDS             complement(1715..2482)
                     /locus_tag="ACJE1S_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type cleavage/methylation
                     domain-containing protein"
                     /protein_id="HGG0807343.1"
                     /translation="MKKFIKSKDTSDAFTLFELVLVVLILGLVISIAQINLKQDRLMQ
                     GAKQILNDIRYVRTLAMTQESFRDLELAVAKREWYKSRWQLYFINSAATNYEQTYTIF
                     LDKNGDGNANLGKTEINIDREIAVDIINPKKLMNSGQSGVIDKSDSKTTQRFNIFKKF
                     GIKKVEFKGSCRGSTRIVFDERGRLYSPLRTSQGVYDKNLAKTNQDCVIRLSSIQANQ
                     ICIIVNPLSGFAYIPKFQDFNKQMIMINGVLSQCSKI"
     gene            complement(2451..3674)
                     /locus_tag="ACJE1S_001828"
     CDS             complement(2451..3674)
                     /locus_tag="ACJE1S_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HGG0807344.1"
                     /translation="MEKIKNYKLIILLLAFDLLALLYGISTLSISVDEAKIYFEEKGS
                     FLFFNHSLLYYLTHFGTFVFGQNDFGLRIPILFFHFLSCILLYILALKYTKTHFDSFL
                     SLLLFVLLPGTVASALLVNEASIVIFLTLAIICAYEYEKKWIFYPLLILALFVDKSFN
                     ILFLTFFFFGIYKRNSFLLTLALVLFGLSISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFIYFFYVVYRLTFKEQKSLLWFLMSVTFIFCSLLSLRQKLYLEDFLPFCVICTPLL
                     IKTLMASYRVRLPQFRLRYKIFIECSIIFLLFCYFVIIGNQILYYFVSDPKYNFANNY
                     HLAKELSKELKKQEIFKLRVGTSLQPRLKFYGIEDSNTFYLKSIKNKDQLDKNKKNIT
                     IKLGKFEKIYQIQRY"
BASE COUNT         1350 a          645 c          470 g         1370 t
ORIGIN      
        1 ttataggtgc ttagagcttg aaaatagcta tttcagcttg aagattatcc gaaatatttt
       61 ttagttctgt cattgcattt ttattttcac taaccgcttg ttgagtttta gaagaaatat
      121 ctgccactgt tataattttt tcttcaattt cttccattaa ttttacttgg gcggctacct
      181 cttgatttac ctcttgtgct ttaaaaagac tgtcattagc ttgtttgtag attaaatcca
      241 cactatctct tacctcttca cttaaacttt taccttgaga aatcaatggt atagactctt
      301 ctataacgcc tactgttgct atcgtttctt cttgaatttg tttgttaatt atagcaattt
      361 gatctgttgc cccgcctgtt ttttcagcca atttacgaat ttcatcagca acgacggcaa
      421 aacctctacc tacatctccc gctctagcag cttctatggc tgcgtttaga gcaagtaaat
      481 tagtttgatc tgtaatctcg ctaataagtt ctgtacttgt tcctatattc ttagcatgtt
      541 cgctaagcaa ggcaatttgc tgagaaactc tagaagaatt gcttgcgata tattccattt
      601 gagaagctgt atcctcggca tattttttat tattctgaca aacttgagtg gtattttttg
      661 aattttcttc tgtttctaga gccattttgg aaacattttg tgttttttga ctgatttctc
      721 gaattttaag agcagattct ctagaagttt cgccttgaaa aatcactgcc ttttcagttt
      781 cacttatacg acctaccacc aaatcagctt tgtggtttaa ctcattagaa atagtaatca
      841 ttttttggac tatatttcgt aattgatttt gcattctaga aatagaataa agtatacttt
      901 gtttatattc tgtatgaatt ggctgtgtta aatttccatt agcaacttcg gtaataattc
      961 tatttacatc tcttggttca ccacctacgg attttttaat atatctcact atcaaataag
     1021 caataaccat agaaataatt aaagcaatta taatgatact catcatgata aattgaaaag
     1081 atttactttc taaaagtgct atttgagtta attcttgatt ggctaactct ttataatcaa
     1141 tcaatttatt tgtttgagct aaccataaaa taaattctgg tctagcagaa tctaaaacca
     1201 ttttagttgc tgattgaata tcattttctt tcaccactgc gtcaataatc ttttgataaa
     1261 tttgcacggt atttttctta gtttttgcaa tatcctccat catagagcgt acatttgaat
     1321 caccaccacc cttagctata atatcattta aaataagctc agcttcttca taatcttttt
     1381 ccaatttttg tatttcagct aaagtttttc ttaagtcctc ctgatcttgt actaaaacga
     1441 catcacgaat taaaattgat ctatcatgga tacttcccct aaaattaatc gcttgacgag
     1501 aaatcaaagc gttttcccct gttgctgttg taagagtttt atctaaaaaa ttcactttag
     1561 ctattgaaaa aacagctata aacagcataa taaaaataat caaagcaaaa ctgaaataca
     1621 atcttgctga aattcctaat cgattcatta ttttctcctt tgtttaatat ttgcattcaa
     1681 attatagcaa atttatatta aaaattaaag cattctaaat tttagaacat tgagaaagta
     1741 caccatttat cattatcatt tgcttgttaa aatcttgaaa tttaggtatg taagcaaaac
     1801 cactaagcgg attgactata atgcaaattt gatttgcctg tattgagctt aagcgtatga
     1861 cacagtcttg attagtttta gctaaatttt tatcataaac accttgagaa gttcgcaaag
     1921 gagaatataa tcttcctctt tcatcaaaaa ctatccttgt agaaccccta cacgaacctt
     1981 taaattctac tttttttata ccaaattttt taaaaatatt aaatctttga gtagtcttac
     2041 tatcgctctt atcaataact ccactttgtc ctgaattcat taattttttg gggtttataa
     2101 tatctacagc aatttcacga tcaatattga tttcagtttt tcctaaatta gcgtttccat
     2161 caccattttt atctaaaaat atcgtataag tttgctcata atttgttgct gctgaattga
     2221 taaaatataa ttgccatcta cttttatacc actctctttt tgccactgct aattccaaat
     2281 ccctaaaact ctcttgagtc attgctaaag ttcttacata gcgtatgtca ttaagaattt
     2341 gctttgcacc ttgcatgagt ctatcttgtt ttagattgat ttgtgctatg gaaatcacaa
     2401 ggcctaagat taaaacaact aaaactagct caaaaagcgt aaaagcatca ctagtatctt
     2461 tggatttgat aaattttttc aaattttcct agctttattg taatattttt tttattttta
     2521 tcaagctggt ctttattttt aatacttttt agataaaaag tattactatc ttcaatacca
     2581 tagaatttca atcttggctg caaagatgtg ccaactctta atttaaaaat ttcttgtttt
     2641 ttaagctctt tgcttaattc tttagcaagg tgatagttat tagcaaaatt atattttgga
     2701 tcagaaacaa aataatataa aatttgattt cctatgataa caaaataaca aaatagtaaa
     2761 aaaatgatag agcattctat aaaaatttta tatcttaatc taaattgcgg taaacgcacc
     2821 ctataacttg ccatcaaggt tttaataagt agcggagtgc aaatcacaca aaatggcaaa
     2881 aaatcctcca aataaagctt ttgcctcaaa gaaagcaagg aacaaaaaat aaaggttacg
     2941 ctcattaaaa accatagtaa acttttttgc tctttaaaag ttaaacgata aactacataa
     3001 aaaaaataaa taaaaacaag cggcgaaaaa caagcggcga aaattcccaa agtatccaaa
     3061 aaatatcctc ttggacgccc acctgtatca aaaccataaa agcttatgct caaaccaaaa
     3121 agtacaaggg ccaaagtcaa taaaaaagaa tttcttttat aaattccaaa aaagaaaaag
     3181 gttaaaaata aaatattaaa agacttatct acaaataaag ctaaaatcaa aagcggataa
     3241 aaaatccatt ttttttcata ttcatacgca caaattatag ctagcgttaa aaaaatcact
     3301 atagaggctt catttaccaa caaagcactt gcaaccgttc ctggcaacaa tacaaaaagc
     3361 aaaagagata agaagctatc aaaatgagtt tttgtatatt ttaaagccaa aatataaagt
     3421 aaaatacaac ttaaaaaatg aaaaaataaa ataggaattc ttaaaccaaa gtcattttgt
     3481 ccaaaaacaa aagttccaaa atgtgtgaga taataaagca aactatgatt aaaaaaaaga
     3541 aaacttcctt tttcttcaaa ataaatttta gcctcatcaa cactaatgct aagggttgaa
     3601 attccataaa gcaaagcaag taaatcaaaa gcaagtaaaa gaataataag cttataattt
     3661 ttgatttttt ccataaattt gattttacaa aattaaactt aaaatatcaa ctgatgtaaa
     3721 tttcaaaaaa taatcccatg cctaatgtat aaaataaaaa tatttttata aaaagccaac
     3781 cttgtaacac cccattttat ttcttttata acttttgaat gaattcataa atttt
//
LOCUS       DBBXOW010000107         3562 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.108, whole genome shotgun sequence.
ACCESSION   DBBXOW010000107 DBBXOW010000000
VERSION     DBBXOW010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.108"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..351
                     /locus_tag="ACJE1S_001829"
     CDS             <1..351
                     /locus_tag="ACJE1S_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF115 domain-containing protein"
                     /protein_id="HGG0807345.1"
                     /translation="NSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQF
                     ELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKL
                     KERKLDKWMERVRR"
     gene            348..2207
                     /locus_tag="ACJE1S_001830"
     CDS             348..2207
                     /locus_tag="ACJE1S_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HGG0807346.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVKNAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYVILGKYGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRTYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELTGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWTKEKLNITTYNCTEGGARIEG
                     TIEKPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKTKKYLQKSILESKEFIKKT
                     QTQLQKLRYTLEKNDKDFQTLEKIKNDLLNLFKEFKKLKLFNELCQAIYFHNECEILK
                     FEVLNINKQKENLIDFLKIQHNWFIQGLGYLDTQNKTIEKSLENWNFDDIIKK"
     gene            2220..>3562
                     /locus_tag="ACJE1S_001831"
     CDS             2220..>3562
                     /locus_tag="ACJE1S_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HGG0807347.1"
                     /translation="MIFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNL
                     DINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNH
                     QHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSR
                     IYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPKDALQGIEQFVYNLPQMI
                     THPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHG
                     IKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVST
                     YASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDY
                     KNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKFFNITT"
BASE COUNT         1404 a          453 c          488 g         1217 t
ORIGIN      
        1 aattctcaaa aaaatgaaat ttttattcaa gaaattattc aagatataga taaaaccaaa
       61 actcaaatag atgaacttta caatactcaa aaagatttga tacaaatttt aggtccctta
      121 ctaactcaat ttgaacttaa tcttgctaga atttatgttt taaatcctaa aaccaaagaa
      181 gatgctttta ataaaagtat tctttggata aaagaacatt tagaatttat ggaattagtt
      241 tatggacata ttaaagcaca agaaaatgct ttgataaaaa atatacttcc tttagaagaa
      301 aaacttaaag aaagaaaatt agataaatgg atggaaaggg tgagaaggtg agagaagagc
      361 tttttttaaa aaatactcaa gctttgtttg aggtcgatga gtttttagct tgtacactaa
      421 gatcacttaa atacttaact tttgcactta tccaagatga aaatggaata aattttaaaa
      481 aagatgatat ttttctttat gaaaatccca ataaagagct tttggaaaac cttactctgt
      541 ttaaaaccga atataacaaa tatcctgttt tgttttttta tggctttgga aatggaatgt
      601 tttataaaac tttatgtaaa aacaaacaac ataaacacat tatcattttt gaagacaatc
      661 ttgaaatttt aactttagct tttcatttat ttgattttag cgaagaatta aaaaaagaac
      721 aactaatact tttttatact ccaaatatta atacagcaca actcaccaca ctttttactt
      781 atgaaatcat tcaaaaaagt gtaaaaattt ttaatctttt tatccataat gatttttatc
      841 aacaatttta tagcactcaa atacaaaata taaatactca actgatagaa atgatacgat
      901 ttatcgtttt aaacaaaggt aatgatccac atgattcttt agttggaatc aaacataccc
      961 tagataatct ccctaaaatg ttaaatcatg gaatttttca agaatttctc aaagaaagaa
     1021 gagctaaggt taaaaatgct atcattgttt ctacaggacc aagtcttata aaacaacttc
     1081 ctttattaaa aaagtatgct aataaagcta cgattttttg tgcagatagt gcttatgtta
     1141 tccttggaaa atacggtata aagcctgatt atgtttgcat gctagagcgt gatgatatag
     1201 tttctaaatg ttttgataat gattttggcg attttaacaa aggcatactt ttcatacttg
     1261 cttctgtggt tcacaaagaa gtattagatt ttttagaaaa agatcaaaga acttatatgc
     1321 ttgtacatcg ccctttaaat tttgcagcta gtttaaaact tgatgaatat ggatatcttg
     1381 gagtaggaca cagtgtttcc aatatgatct atgaactaac aggagcttta agatttgaaa
     1441 atatcatttt tataggacag gatttagctt atggcgagga tggaagttca catcctaaag
     1501 agcatataca tggaagtcaa ggtgaagaaa tcagaggaga aaaatataca ctagcttatg
     1561 ggggaaaagg caaagtaaga acacaactta cttggaattt atttcgtcaa gcttttgaaa
     1621 aagatatatt ttggacaaaa gaaaaactca atatcaccac ctacaactgc accgaaggtg
     1681 gagcaaggat agaaggaact atagaaaaac cttttttatg ggcttgtgag aatttacttg
     1741 ataaagattt aaataaacct tttgattttc caaaatttct agataaaaaa ctagccaaag
     1801 aaaaattaga aaaaacaaaa aaatatctcc aaaaaagcat tttagaatcc aaagaattta
     1861 taaaaaaaac tcaaactcag cttcaaaagc ttagatacac tttagaaaaa aatgataaag
     1921 attttcaaac tcttgaaaaa atcaaaaatg atcttttaaa tctttttaaa gaatttaaaa
     1981 aactcaagct ttttaatgaa ctttgtcaag ctatttattt tcataacgaa tgcgaaattt
     2041 taaaatttga agttttaaac ataaataagc aaaaagaaaa tttaatagac tttttgaaaa
     2101 tacaacacaa ttggtttatc caaggtttag gataccttga tactcaaaac aaaaccatag
     2161 aaaaaagttt agaaaattgg aattttgacg atataatcaa aaaataatta ggatttccaa
     2221 tgatcttcac ccctactcaa aaagaactct ttaacaaaaa cattgaggct ttaagtaata
     2281 ttcttttaaa agaaagttta aaagaaatta aatcaagtaa atttgaactt atcttaggta
     2341 aagataatct agatatcaat ctaaaagata caagtgataa tacttttctt tatgaaaatg
     2401 ttattgatga attaaacact atgctaaaca cttataatga taaatatcta ctttatcctg
     2461 tattgtattt ttatggtttt ggaaatggaa ttttatttaa agctttattg caaaataaaa
     2521 atcatcaaca tattgttgtt tttgaaaaag atatagaaat catttggata atgtttcata
     2581 tcttagattt ttcaagtgaa ttgcaaaatt caagattgat ggttttgaat acaaataaac
     2641 tagaaattca agattataat gaactttgtt cttctaaacc tttctttcaa ttttctagaa
     2701 tttatttttt agaactgatg agtcattatt atgaaagatt tcatgaagat attttaggat
     2761 tgaataaaaa attagcagaa aattttaaaa attctattgt ttctcatggt aatgatccaa
     2821 aagatgctct tcaaggcata gagcaatttg tttataatct tcctcaaatg attactcatc
     2881 ctagttataa agaattactt tctaaaagaa agggtgtaag tgatacagct atcattgttt
     2941 ctacaggacc atctcttact aaacaattgc ctttattaaa aaagtatgct aataaagcta
     3001 caattttttg tgcggattct tcttatccta ttttagctaa acatggtata aagcctgatt
     3061 atgtgctttc tttggaaagg attcctttaa cttctgaatt ttttaacaat gattttgggg
     3121 aatttgataa ggatattttg tttgttctaa aatcctatgt ccaccctcat actacaaaat
     3181 atcttcaaaa aaataataga aattttatgc ttgtatctac atatgcaagt tttatacaat
     3241 atttaaaatt agattatttt ggatatttta acatgggcaa aagtgtagca aatatgagct
     3301 acctacttac agaatattta aactataaaa acattattct cataggacag gatttagctt
     3361 atgcaaaaga tggattttcc catactaaag attataaaaa tcttgataaa catgaaggac
     3421 attttcaaag agataagggc aaatttcaat gtttagctta tggaggtaac ggaaaagttg
     3481 aaagctctga aatttggact atgtttcgac taatttttga aaatgatatt aattattttc
     3541 aaaaattctt taatatcacc ac
//
LOCUS       DBBXOW010000108         3427 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.109, whole genome shotgun sequence.
ACCESSION   DBBXOW010000108 DBBXOW010000000
VERSION     DBBXOW010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.109"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..493)
                     /locus_tag="ACJE1S_001832"
     CDS             complement(<1..493)
                     /locus_tag="ACJE1S_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807348.1"
                     /translation="MIPNFIASFDVALGRKSLRERKGYLKLSNTIAYGGLSVDALALY
                     IQLAKLSEKTIVSEIYLREFIKVKNNQRMSLNRLRIAKKELIELRLLEIKKVRNGSLN
                     FYEWILKDENYQVKKHFNKSLSLLKNSDEKLSKTLKNNASSIDRKLTTENEKKENLHY
                     IETR"
     gene            complement(661..816)
                     /locus_tag="ACJE1S_001833"
     CDS             complement(661..816)
                     /locus_tag="ACJE1S_001833"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807349.1"
                     /translation="MNFGWMFVAILQTYLSVGEKERIENEKGNEKSMELAGALLENDK
                     NLSLNKT"
     gene            complement(740..958)
                     /locus_tag="ACJE1S_001834"
     CDS             complement(740..958)
                     /locus_tag="ACJE1S_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807350.1"
                     /translation="MKKIDFFDFTKILSNHYTVISVKKIRTNKSRPSFKKQIEFKKLY
                     GIPHEFWVDVRSNLTNIPKRGRKRKDRE"
     gene            1070..1804
                     /locus_tag="ACJE1S_001835"
     CDS             1070..1804
                     /locus_tag="ACJE1S_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG0807351.1"
                     /translation="MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIES
                     SEATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFNEVILQDVFRNDNQINFRYFPDI
                     YASAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFII
                     VDRSKNSLGAISNADIVIFRKNDDLFCKKIKKEPFEDYIFLVSENKKYEDKKVDNSEF
                     EQCEILGAVVSKMAVETFKNFIEVVG"
     gene            1804..2304
                     /locus_tag="ACJE1S_001836"
     CDS             1804..2304
                     /locus_tag="ACJE1S_001836"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807352.1"
                     /translation="MNIKELLSIEKYPKIQQTYILPSLENSKSLKIELQCDDDKYHKE
                     NFILDISRSSVQFQRKTNQYRYNVVNIIARIDFYSSHTNPEFNPNKIPSDKRLSELME
                     KYSEFRFRNENHIHIFMENYADKWAFPLSEFNIKTNDDFLNQSYDFCQFCNIININFA
                     KGDLFC"
     gene            2298..3062
                     /locus_tag="ACJE1S_001837"
     CDS             2298..3062
                     /locus_tag="ACJE1S_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1828 domain-containing protein"
                     /protein_id="HGG0807353.1"
                     /translation="MLNIENLMSSYFSYIKSNFDISKIENNIYEITTPFLDKSNDNIL
                     FYIEKKDDLIELSDGGETLRNLSLSGFDFNSQKRLKELEIILNGFNIQKNNDILFTRA
                     NENNFAKKQHNLIQALISVNDMFVLAQGKIQSFFFDDVKNFFEENFIRYTENISLDGK
                     SHLNHKFDFLITKSSQQKERLIKIINNPKNDNLKATLFSFMDLPQERKANADNIIIFN
                     NKEGRNMDALVNASKEHNVKAFLWSKRKEYIHYLVA"
BASE COUNT         1314 a          427 c          428 g         1258 t
ORIGIN      
        1 tgcgtgtttc tatataatgc aaattctctt ttttttcgtt ttcagtagtt aattttctgt
       61 cgattgatga agcgttattt ttaagagttt tgcttagctt ttcatcactg tttttaagca
      121 aagataaaga tttgttaaaa tgctttttaa cttgataatt ttcatctttt aaaatccatt
      181 cataaaaatt taaagagcca tttctaacct ttttaatttc taaaagtctt agttcaatta
      241 attctttttt agcaattctt agtctgttta agctcattct ttgattgttt ttaactttta
      301 taaactctct tagatagatt tcacttacaa tcgttttttc actaagcttt gctaattgaa
      361 tatacaatgc cagagcatca acactaagac caccataagc tatagtgttt gataatttca
      421 aatagccttt tctctctctt aggcttttac gccccaaagc tacatcaaaa cttgctataa
      481 aatttggtat caacaactct cctttatgtt ataatttaaa ttaaaaaggc tttttatgtt
      541 taattctttc ttaatttgtc ctcactaccg taatccgttt taaaaagtcc tttgctataa
      601 tttttttgca cccaatcaag aaaaggactt atcaaaatgg ataaattacc taggagaaat
      661 ctaagtctta ttaaggctta gatttttatc attctcaagc aaagcaccag caagctccat
      721 actcttttca ttgccttttt cattctctat cctttctttt tctcccacgc ttaggtatgt
      781 ttgtaagatt gctacgaaca tccacccaaa attcatgagg tattccatag agttttttaa
      841 actctatttg ttttttaaaa cttgggcgtg atttatttgt tctaatcttt ttaacactaa
      901 taaccgtata gtgattactc aatatttttg taaaatcaaa aaaatctatt tttttcataa
      961 cgaaagtata aaataaagaa acttaataaa tatttaatta tgtttctaat tatggaacat
     1021 tatttgcttg aaaaaagtgt ataattttta tactaaaaaa ggagagaata tgggaagaaa
     1081 tggagatata ttcgattttc attttgatac tgaaaaattt aaattttatt taaaaaatag
     1141 agataaaaaa gttacatatc aagatttgat ggaaatttta tataaaaatg gcatagaaag
     1201 ctcagaagca acaataaaaa aatggttgat gtctaaagaa gataataaaa caaaacctaa
     1261 accacaatat ataaaaattt tatgtaatgc attggatatt cctttcaacg aagtgatatt
     1321 gcaagatgtt tttagaaatg ataatcaaat aaatttcaga tattttccag atatttatgc
     1381 aagtgcagga cttggaacat catctcaaag tgaagaagtt aaaatagttt ccgttgatga
     1441 aaattttcta aaagaaattt tagatatacc tataaagaag agttatgata ttataaaaat
     1501 taatggcgat agcatggaac ccattttatc taatggagat tttattattg tggatagaag
     1561 caaaaattca cttggggcta tttcaaatgc agatattgtt atttttagaa aaaatgatga
     1621 tttattttgc aaaaaaatta aaaaagaacc ttttgaagat tatatttttt tagtttctga
     1681 aaataaaaaa tacgaagata aaaaagtaga taatagcgaa tttgaacaat gcgagatctt
     1741 aggtgctgta gtatcaaaaa tggctgttga aacctttaaa aattttatag aagtggtggg
     1801 atgatgaata taaaagaatt attaagcatt gaaaaatatc caaaaataca acaaacttat
     1861 atattgccaa gtcttgaaaa ttctaaatct ttaaaaatag aattacaatg cgatgatgat
     1921 aaatatcata aagagaattt tatacttgat atttcaagat ctagcgtaca atttcaaaga
     1981 aaaacaaacc aataccgtta taatgtggtt aatataatag caagaattga tttttattct
     2041 tctcatacaa atccagaatt taatccaaat aaaattccaa gcgataaaag attatcagag
     2101 cttatggaaa aatatagcga atttagattt agaaacgaaa atcatatcca tatttttatg
     2161 gaaaattatg cagataaatg ggctttccct ttaagtgaat ttaatattaa aacaaatgat
     2221 gattttttaa atcaaagtta tgatttttgc caattttgta atataataaa tataaatttt
     2281 gcaaaaggtg atttattttg ttaaacatag aaaatcttat gagttcttat ttttcttata
     2341 ttaaaagcaa ttttgatata tcaaaaatag aaaataacat atatgaaatt acaacaccat
     2401 ttttagataa aagcaatgat aatattttat tttatataga aaaaaaagat gatttgatag
     2461 aattaagcga tggcggagaa actttaagaa atttatcatt aagtggtttt gattttaatt
     2521 ctcaaaaaag attaaaagaa ttagaaataa ttcttaatgg cttcaatatt caaaaaaata
     2581 atgatatctt atttactcgt gcaaatgaaa ataactttgc aaaaaaacaa cataatctca
     2641 tacaagcact tataagcgtt aatgatatgt ttgtgttagc tcaaggcaaa atacaaagtt
     2701 tcttttttga tgatgtaaaa aatttttttg aagaaaattt tattagatat acagaaaata
     2761 ttagtttgga cggaaaaagt catttaaatc ataaatttga ttttttaatt acaaaatctt
     2821 cacaacaaaa agaaagactt ataaaaataa ttaataatcc aaagaatgat aatttaaagg
     2881 caacattatt ctcttttatg gatttacctc aagaaagaaa agctaatgct gataatatta
     2941 ttatttttaa caataaggaa ggtagaaata tggacgcttt agtcaatgct tcaaaagagc
     3001 ataatgtaaa agcatttctt tggagcaaaa gaaaagaata tatacattat ttagtggctt
     3061 aaatataata ggcaaaaata aaaaaactca taattttacc gttgctagca actcttttct
     3121 tttttcataa attaagatta aatcaggtct tatgacaatc cctaatccct tttagttttc
     3181 cttttaatcg tggtctttgt attttagctc taaaatttcg tttttgcaaa aaagatttaa
     3241 acttccatta tcagctttaa atcttctttg cttagttttt tagcttcttt aataaatttc
     3301 ttgcttaaaa aagttcttaa ataaaccctt ccacttaaaa gcttctatgc attttctata
     3361 gttaaggtca ttttacactg cttaataaat cctaatttat ccttaaaaat tataccacaa
     3421 aaatatt
//
LOCUS       DBBXOW010000109         3271 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.110, whole genome shotgun sequence.
ACCESSION   DBBXOW010000109 DBBXOW010000000
VERSION     DBBXOW010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.110"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            41..286
                     /locus_tag="ACJE1S_001838"
     CDS             41..286
                     /locus_tag="ACJE1S_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HGG0807354.1"
                     /translation="MALLITKDCVCCDACREECPDEAIYEHSPIYVIDADLCSECVND
                     FSEPACIVACPYECIIPDPDNVESIEELKLKNRNREF"
     gene            286..1746
                     /locus_tag="ACJE1S_001839"
     CDS             286..1746
                     /locus_tag="ACJE1S_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HGG0807355.1"
                     /translation="MAKKTAVVDLGSNSIRMVVFEKTSRYSFYTTCEYKRKVRLGENA
                     YNNGKILQEDSMQRAENALAFFKQCALKHKCKKIFIIGTSALRDAPNSKDFIKRIKDK
                     LNLNIRCIDGKNESYLGGLATLNLLSPFKDGTTLDIGGGSSELCLIKNNKIISCISLD
                     LGTVRLKELFYDKGKADALDDFIKPILEQIPSEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNIHDFRYMLEDEKEHILKIFNSKADALINFGIKKDRFDTIKEGIFIFLKIAEKL
                     KAKQIITSGVGIREGVYLQDLLRPKHTFPVNFNPSLKSLQDRFLQGNINNKTPYFSIQ
                     IFKVLQGLHKIHEKYQQSLLNAAKLCHLGEYLNFYFANEHSAYFILNGLNYGFSHQEK
                     VLIATLIKLNGKKVNPYNLEPYRQLLPNTHIISWLNFILSLAKILSTNENKIEIAFVN
                     NTLYIYSESKILDLPKDELKKITKPATIALAINQKP"
     gene            complement(1743..2534)
                     /locus_tag="ACJE1S_001840"
     CDS             complement(1743..2534)
                     /locus_tag="ACJE1S_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807356.1"
                     /translation="MKVLLLSILALPLFAVELISYNIYDRNDRVDLMLSFDSAYGGKI
                     SQKKEKNLTLLTLSDLKYSKEELKSLNSGLVDKISISSKDNNTYIMLQNKEPISLELS
                     SINDKFGVRIRAVQQGKESINPEQSNLSTNEEPILNSKKTSLEGYDYTNYILVMLVLF
                     VLLIMLWWLKRTLAFKNTGVSRDFRMVFQRFLDKNNQLIVFEYASKRYTMIVGNSNIV
                     LEEIEIPDYEPKVTEKSEKNFDSFFEENKKRIQSLIEQRQKNKKS"
     gene            complement(2534..2842)
                     /gene="fliN"
                     /locus_tag="ACJE1S_001841"
     CDS             complement(2534..2842)
                     /gene="fliN"
                     /locus_tag="ACJE1S_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HGG0807357.1"
                     /translation="MGSDIDFGDRHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(2842..3264)
                     /locus_tag="ACJE1S_001842"
     CDS             complement(2842..3264)
                     /locus_tag="ACJE1S_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HGG0807358.1"
                     /translation="MLKVLEYSITHFFEHILRLHIEKAEDIVGELYGASIPVMEKSGR
                     EYHFYLFFPKEFLQTIANVLVRDEKFKEDDWCDLSKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGRVDFSSIILDESLTYSFENHYFRIGYCK"
BASE COUNT         1148 a          539 c          451 g         1133 t
ORIGIN      
        1 tataaactaa aaattatttt taaaattttg aaaggtgata atggctcttt tgattactaa
       61 agattgcgta tgttgtgatg cttgtagaga agagtgtccg gatgaggcta tttatgaaca
      121 tagtcctatc tatgtgattg atgctgatct ttgttcagag tgtgttaatg atttttcaga
      181 acctgcttgt atagtggcat gtccttatga atgtatcata cctgatcctg ataatgttga
      241 aagcatagaa gagttaaaat taaaaaatcg taatagagaa ttttaatggc aaaaaaaacc
      301 gctgttgtag acttaggatc aaattccatt agaatggtgg tttttgaaaa aacttcgaga
      361 tatagttttt atactacttg tgaatacaaa cgcaaagtta gacttggaga aaatgcttat
      421 aacaatggca aaattcttca agaagactct atgcaaaggg ctgaaaatgc tctagctttt
      481 tttaaacaat gtgcgctcaa acacaaatgt aaaaaaatat tcattatagg tacttcagct
      541 ttaagagatg ctccaaattc taaagatttt attaaaagaa ttaaagataa gctaaactta
      601 aatattcgat gtattgatgg aaaaaacgaa agttatcttg gcggtcttgc aaccttaaat
      661 ttattaagtc cttttaaaga tggcaccaca cttgacatag gtggaggttc aagcgaactt
      721 tgtcttataa aaaacaataa aatcatctct tgtatttcat tagacttagg aacggttaga
      781 ttaaaagaat tgttctatga taaaggtaaa gcagatgctt tagatgattt tatcaaaccc
      841 attttagaac aaatcccttc tgaattttgc aatcaaaatc tcattgcaat aggtggaagt
      901 ttaagagcca tttcaaattc cattatgcaa aaaaactctt atcccttaaa aaatatacat
      961 gattttagat atatgctcga agatgaaaaa gagcatatct tgaagatttt taactctaaa
     1021 gcagatgcat tgattaattt tggtatcaaa aaagatcgtt ttgatactat taaagagggt
     1081 atttttatct ttctaaaaat agcagaaaaa ctcaaagcca aacaaatcat tactagcggg
     1141 gtaggcattc gcgagggtgt gtacttgcaa gatttgctac gccctaaaca cacttttcct
     1201 gtaaatttta accctagttt aaaatctcta caagatagat ttcttcaagg aaatataaac
     1261 aacaaaacac cttatttttc tatacaaatt tttaaagtct tacagggtct tcataaaatc
     1321 catgaaaaat atcaacaaag cctattaaat gccgcaaaac tttgtcattt gggtgaatat
     1381 ttgaattttt actttgctaa tgaacactct gcatatttta ttttaaatgg attaaattat
     1441 ggcttttcac accaagaaaa agtgttgatt gcaactctta ttaaattaaa tggcaagaag
     1501 gtaaatcctt ataatcttga gccctataga cagcttttgc caaacacgca tatcatttct
     1561 tggttgaatt ttattcttag cttagctaaa atactaagca caaatgaaaa taaaatcgaa
     1621 attgcttttg tcaacaatac actttatatt tatagtgagt caaaaattct tgatctacct
     1681 aaagatgaac tgaaaaaaat caccaaacca gccacgatag ccttagctat caatcaaaag
     1741 ccttaagatt ttttattctt ttggcgttgc tctataagac tttggatacg ctttttattc
     1801 tcttcaaaga aagaatcaaa atttttttca gatttttctg taacctttgg ctcataatct
     1861 ggaatttcaa tctcttctaa tacaatatta gaattgccca ctatcatagt ataacgcttg
     1921 cttgcgtatt caaaaactat caattgatta tttttatcta aaaatctttg aaataccata
     1981 cgaaaatctc tagaaacacc cgtattttta aaagctaaag ttctcttaag ccaccaaagc
     2041 attataagca agacaaataa aaccagcatt actaaaatgt aatttgtata atcatagcct
     2101 tctaagcttg tctttttaga atttaaaatc ggctcttcat ttgtacttaa attgctttgt
     2161 tcaggattta tgctttcttt accttgctga accgctctta tcctaactcc aaatttatca
     2221 ttaatagagc ttaattctaa ggagattggc tctttgttct gtagcatgat atatgtatta
     2281 ttatctttag aactgatact gatcttatcc acaagtcctg aatttaaact tttgagttct
     2341 tctttgctgt attttaaatc actcaaggtt aaaagagtaa gatttttttc ttttttctga
     2401 gaaattttac ccccataagc actatcaaaa gatagcatta aatctactct atcatttcta
     2461 tcgtaaatat tataactgat taattctaca gcaaaaaggg gcagtgcgag tatgctcaat
     2521 aataaaactt tcattaaatt tcttttttga aatattgaag tacggtttta gaatctagaa
     2581 tttcattaat tctaattgct aaatttttct cataaaccat aacttcgccc ttaccaaaga
     2641 tgcgcttatt gatatacaat tcaacacttt ccccagcagg tttttcaaga tcgataaccg
     2701 aacctacttc aagttttaaa agttcagcta cactcatatt ggtagtgcca agctcactaa
     2761 caaaatctac tgtgatatct aagatatctt cataagactg caaaagtccg tgacgatctc
     2821 caaaatcaat gtcactgccc attatttaca atatcctatt ctaaaataat gattttcaaa
     2881 gctataagtt aaagattcat ctaatataat agatgaaaaa tcaaccctac ctaaatactc
     2941 tggtatgcca agtttatact catcatctcc cttagcatca ttgagtaaat tttttgcata
     3001 gcctatgatt tgattggcgc attctttact taaatcacac caatcatctt ctttaaattt
     3061 ttcatcacga actaaaacat tagcaattgt ttgtagaaat tcttttggaa aaaataaata
     3121 aaaatgatat tctctaccac ttttttccat tacaggaata ctggctccat aaagttcacc
     3181 tactatatct tcagcctttt cgatatgaag tcttaggata tgttcaaaaa aatgtgttat
     3241 tgaatattca agaactttca acataatatc a
//
LOCUS       DBBXOW010000110         3241 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.111, whole genome shotgun sequence.
ACCESSION   DBBXOW010000110 DBBXOW010000000
VERSION     DBBXOW010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3241
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.111"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            179..1093
                     /gene="ilvE"
                     /locus_tag="ACJE1S_001843"
     CDS             179..1093
                     /gene="ilvE"
                     /locus_tag="ACJE1S_001843"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HGG0807359.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELEKAQIELLKVNDFKNNVYIRPVIFL
                     GDGVMGLYHVKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFVRNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGLTVLRQRISRDEVYTADEAFFTGTAAEITPINNVDARIIGSGIRG
                     SITKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            1109..2191
                     /locus_tag="ACJE1S_001844"
     CDS             1109..2191
                     /locus_tag="ACJE1S_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HGG0807360.1"
                     /translation="MPADLNDYFNKKNGNSNNNNNRQNFNFKAPEFNFKGFGKFSPFV
                     YGVIIIVLFLIIAKPFMVINSGEMGIKSTTGRYDPNPLEPGLHFFIPFIQKITTIDTR
                     VRQINYASIEGSNENLTSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQTIA
                     TWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNAIATQIEEGIRKTIEAQPNEPV
                     ELRAVQLREIILPLKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEANAT
                     IISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAKIF
                     LTPGGAVPNIWVDTKDAKKQSSTNMN"
     gene            2202..2732
                     /locus_tag="ACJE1S_001845"
     CDS             2202..2732
                     /locus_tag="ACJE1S_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HGG0807361.1"
                     /translation="MERLKEIVHFYTTHLYLVDYMLILFVFFLFTCVLLLCIFLRHKP
                     VAALLIIALNIIICFLIYTYGYKFIDSEVRSRKTTIVEQKFIQSSEALIIDFNITNTS
                     KNDFKQCKVIARIFKDKLPEDNLINEYKNQLIPFRQKSREIFNLKKNTTQFQRISFDN
                     FNYDNNYTIRLNSECF"
     gene            2732..3241
                     /locus_tag="ACJE1S_001846"
     CDS             2732..3241
                     /locus_tag="ACJE1S_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HGG0807362.1"
                     /translation="MQFTIFHILAFVILLLCFILVCILIFLKVKQKEFALISYTIATI
                     FTALLIYSVFLTINQFTTQASLSKLTFSRDLRHESIIITGRVQNLTKFNIRKCYLMLS
                     ILNKKRVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNP
                     EFYHTLKCI"
BASE COUNT         1169 a          488 c          525 g         1059 t
ORIGIN      
        1 cagaaaaagg ccatatcctt aataaaatcg actcgataaa ttctaaaagt ttgattttat
       61 tttttattaa aatccttcat aaatgtttaa atttatactt tatatatcaa gctatcatta
      121 atttactttt gctaaaatta aaagtttttt aacaaaaata tgactattaa ggctaaaaat
      181 gatctcagca gataaaattt ggatggatgg aaaattagtt gattttaaag atgcaacctt
      241 gcacttttta acccattctt tacattatgg taatgctgtt tttgaaggaa caagagctta
      301 taaaacagat aaaggcttag cgattttcag acttgaagat cacactaaaa gacttttaga
      361 atctgctaaa attactcttt taaactgccc tttttctcaa aaagagcttg aaaaggcaca
      421 aattgaactt ttaaaagtaa atgattttaa aaacaatgtc tatattcgcc ctgtaatctt
      481 cttaggagat ggagtaatgg gactttatca tgtaaaagcc cctgtacgcg ttggcatcgc
      541 tgcttgggaa tggggtgctt atttgggtga agaaggttta gaaaaaggta ttaaagtaaa
      601 aatttcatct tttgtaagaa atagtgtaaa atcttgtatg ggtaaagcaa aagcgagcgc
      661 aaactatctt aactctcaaa ttgcaaaatt tgaagctatt gaagcaggat atgaagaagc
      721 tttgatgctt gatgaagagg gttttatagc agaaggtacg ggagagtgct tctttatcgt
      781 aaaagatgga gttttaatca ctccacctaa tgatttttct ttaaaaagta tcactcaaga
      841 cacagttctt aaaatcgctc acgatcttgg tttaactgta cttcgtcaaa gaatttcaag
      901 ggatgaggtt tatactgctg atgaagcatt ttttactgga actgctgcag aaatcactcc
      961 tattaataat gttgatgcaa gaattatagg cagtggtata agaggttcta ttactaaaaa
     1021 acttcaagat gcttattttg atgtagttta tggacgcaat gaaaaatacg catctatgct
     1081 aacttatatt taaagataaa ggaaataaat gccagctgat ttgaatgatt atttcaataa
     1141 aaaaaatgga aattctaata acaataacaa ccgacaaaat ttcaatttca aagctcctga
     1201 atttaatttc aagggttttg gaaaattttc tccttttgtt tatggtgtaa ttattattgt
     1261 tttgttttta attatcgcaa aaccttttat ggtgataaat tctggagaaa tggggattaa
     1321 atccactaca ggtagatacg acccaaatcc tttagagcca ggactccatt tttttatacc
     1381 ttttatacaa aaaataacta caattgatac gagagtaaga caaatcaatt atgcttctat
     1441 agaaggaagt aatgagaatt taacttcagg ttcaggtgtg attaataaaa acagcatttc
     1501 cgtgcttgat tcacgcggct tgcctgtttc tattgatgta acagttcaat accgcttaaa
     1561 tcctttacaa gttcctcaaa ctatagcaac ttggagttta aattgggaaa ataaaatcat
     1621 agatcctgtg gtgcgtgatg tggttcgaag tgttgtagga aaatatactg ctgaagagtt
     1681 gccaacaaat cgtaatgcaa tcgcaaccca aatcgaagaa gggataagaa aaaccataga
     1741 agcacaacct aatgagccag tggaacttcg tgcggttcaa cttagagaaa ttatattgcc
     1801 tttgaaagta aaagagcaaa ttgaacgcgt gcaaattgca aaacaagaag cagaaagaac
     1861 taaatatgag gtagaaagag caaatcaaga agctttaaaa aaagctgctt tggctgaagg
     1921 ggaagcaaat gcaaccatca tcagtgctaa aggtaaagca atggctgtaa aaatagaagc
     1981 agatgcgcaa gcttattcta ataaagaaat tgcgaatagt ttaaatactc ctttgcttaa
     2041 cttaaaacaa attgaaaccc aaaaagaatt taatgaagcc ttgaaagtca atcaagatgc
     2101 taaaattttc ttaactcctg gtggagcagt accaaatatt tgggtggata ctaaggatgc
     2161 taaaaaacaa agttctacta acatgaacta ggatatataa agtggaaaga ctaaaagaaa
     2221 ttgtgcattt ttacactact cacttatatt tagtggatta tatgctgatt ttatttgtct
     2281 ttttcctctt tacttgcgtt ctactcttgt gtatcttttt acgccacaaa cctgtggcgg
     2341 ctcttttgat catcgcactt aatataatta tttgtttttt gatttataca tatggatata
     2401 aattcataga tagcgaagta aggagtagaa aaacaaccat tgtagaacaa aaattcatcc
     2461 aaagctctga agctttaatt attgatttta atatcacaaa tacttctaaa aacgacttta
     2521 aacaatgtaa agtgattgct agaattttca aggataaatt acccgaagat aatctcatca
     2581 atgaatataa aaatcaactc attcccttta ggcaaaaaag cagggaaatt tttaatctga
     2641 aaaaaaatac aactcaattt caaagaattt cttttgataa tttcaactat gacaataatt
     2701 acaccatacg cctcaattcg gagtgttttt aatgcaattt acaatttttc atattttggc
     2761 ttttgttatc ttgcttcttt gctttatttt agtttgtatt ttaatttttt taaaagtgaa
     2821 gcaaaaagaa tttgctctta tttcctatac tatcgcgacc attttcaccg cacttttaat
     2881 ttattctgta tttctcacta tcaatcaatt cacaacccaa gctagtctta gcaaacttac
     2941 cttttctaga gatttaagac atgaaagtat tattattaca ggaagagtgc aaaatcttac
     3001 caaatttaat attcgtaaat gctatttaat gctaagtata ctaaataaaa agcgagttgg
     3061 aggtgaaatt ttcaatgata aaaatatccg taacgctaaa atgcaaaata caagtgtttc
     3121 ttatactata gaaatcatag acacactccc gggtaatacc tataaagaat ttagagctag
     3181 cgttcctttt cctccaactt ttaataatcc tgaattttat cacaccttaa aatgtatttg
     3241 a
//
LOCUS       DBBXOW010000111         3232 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.112, whole genome shotgun sequence.
ACCESSION   DBBXOW010000111 DBBXOW010000000
VERSION     DBBXOW010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.112"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            2..784
                     /gene="fdhD"
                     /locus_tag="ACJE1S_001847"
     CDS             2..784
                     /gene="fdhD"
                     /locus_tag="ACJE1S_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HGG0807363.1"
                     /translation="MESLFTTQILKYKGKDLFTCDDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAVGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPQSIEASKITSEAKFNKDEILKQMSEFYTQCDLYEKTGCVHTAKLF
                     VDKDTFFIGEDIAQHNTIDKALGKARLAGVELSKCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARGENINIYSGENRING"
     gene            777..1508
                     /locus_tag="ACJE1S_001848"
     CDS             777..1508
                     /locus_tag="ACJE1S_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HGG0807364.1"
                     /translation="MDKNKKILAYMKELLNSNEKLDCGTAFKIAKKFDVAIEEIGKIA
                     DINGIRIDNCELGQFGHLDFEKAKIEVLRKVEPSLDEKRRIFCKDARNIAKEGCGLKS
                     MRSALKAYKIDVKYCQLGCFKEKKGKQFVVRTKTWIENADGDLLFGKGKTELLELIGQ
                     TGSLLHASKLMGINYKKAWMHLQVLQKNSQEILVSSRQGRSKESGTKLTPRAMELMEN
                     YATLQKDIEEYANKRFKELFFKHKK"
     gene            1633..2205
                     /gene="yedF"
                     /locus_tag="ACJE1S_001849"
     CDS             1633..2205
                     /gene="yedF"
                     /locus_tag="ACJE1S_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HGG0807365.1"
                     /translation="MRIDCRNLECPKPIVETKKALQNLQNNEILEIVLNSVISKNNVL
                     KFLTSLNLHADIEENNNEFYIRVKKQELDFSKASTDEYNVLFLKTDKVGDGKLGENLL
                     VGFLSTLKNVENIPSKILCVNESVFINVDENHRAHLAMKELEKLGVEIISCGACLEFF
                     GKSKELKIGSIGNAYEILNELCGKAKIITL"
     gene            2213..>3232
                     /gene="selD"
                     /locus_tag="ACJE1S_001850"
     CDS             2213..>3232
                     /gene="selD"
                     /locus_tag="ACJE1S_001850"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:2261..2263,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HGG0807366.1"
                     /translation="MEYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQTSPALLSDIG
                     NNEDASVFQISPELALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCHHELNVLQELLQGANDKVQECGGIIVGGHTIESGELFFGLSVTGKVHPKKFI
                     ANNTAKEGDLILLTKPLGTGILSTALKAQMLEEKHLDRMLESMMGLNYKSSQIALRFG
                     VNAMSDVTGFGFLGHLREMLNDSISFMIFKDKLPYLEGVKEYFDMGLIPGGAYKNLDF
                     IQEFYPGLNEEDLLLCDPQTSGGLLISIEEKKALECLKALEDENIKAKIVAKAVAKQD
                     DRFIFS"
BASE COUNT         1170 a          397 c          661 g         1004 t
ORIGIN      
        1 gatggaatcc ttatttacaa ctcaaatttt aaaatataaa ggcaaagatt tatttacttg
       61 tgatgatact ttagtgcgtg aaatcaagct tgaaattttt atcaatgatg aaaaagtagg
      121 cgctttaatg gcaactcctg tagatgagca agctttggcg gtggggtatt tgatgagtga
      181 aaatatcatt gctaaggtgt ctgatataga aagcatagaa actaaagatg atggcatgag
      241 tgtgcatatt aaagccaaga ttgataaaga aaatttagct aaactcaatg ctgaaggtgt
      301 ggtgataagt ggttgtggta gagctcatac agccaatatt gacccacaaa gtatagaagc
      361 aagtaaaatt acaagtgagg caaaatttaa taaagatgaa attttaaaac aaatgagtga
      421 attttatact caatgcgatc tttatgaaaa aacaggttgc gtgcacacag ccaaactttt
      481 tgtcgataaa gatacctttt ttataggcga ggatatagcc caacacaata ccatagataa
      541 agctctagga aaggcaagac ttgcgggagt agagcttagc aaatgctttt taatggttag
      601 tggtaggctt agttctgaaa tggtggctaa ggcagtgatg cacaaaattc ctgttcttgt
      661 ttcacgcaca gctcctactt gtttaggtgt catgatagca agaaaatttg atttaacact
      721 ttgtggcttt gcaaggggtg aaaatatcaa tatttatagt ggagaaaata gaatcaatgg
      781 ataaaaataa aaaaatacta gcttatatga aagagctttt aaatagcaat gaaaagcttg
      841 attgcggaac ggcttttaaa atcgctaaaa aatttgatgt agctatagaa gagataggca
      901 aaatagcaga tatcaatgga attcgcattg ataattgtga gcttgggcaa tttggccatc
      961 ttgattttga aaaagcaaaa atagaagttt taagaaaggt agagcctagc ttagatgaaa
     1021 agcgtagaat tttttgtaaa gatgcaagaa atattgccaa agagggttgc ggattaaaat
     1081 caatgcgttc tgctttaaaa gcatataaaa tcgatgtaaa atattgccaa cttggttgtt
     1141 ttaaagaaaa aaaaggcaag cagtttgtag ttaggactaa gacttggata gaaaatgcag
     1201 acggagattt gctttttgga aaaggaaaaa ccgagctttt agaactcata gggcaaacag
     1261 gaagtttgct tcatgcttca aaacttatgg ggataaatta taaaaaagct tggatgcatt
     1321 tacaagtttt acaaaaaaat tctcaagaaa ttttagtaag ttcaagacag ggtcgctcta
     1381 aagagtcagg caccaaactt acaccaaggg ctatggaact tatggaaaat tacgctactt
     1441 tgcaaaaaga tatcgaagaa tatgccaata agcgttttaa agaattattt tttaagcata
     1501 aaaaataatt gctaggtttg gttttgtaat tttaaatgca agtaatttta ataaacttgc
     1561 atatttcctt gatttaaaga caaaaaaagc aagaaagtat tattattttg tttattaaat
     1621 gaaggagaaa taatgagaat tgattgtaga aatctcgagt gtcctaagcc tattgttgag
     1681 acaaaaaaag cactccaaaa tcttcaaaat aatgaaattt tagaaattgt gttaaattct
     1741 gttatttcta aaaataatgt tttgaaattt ttaacttctt tgaatttgca tgctgatatt
     1801 gaagaaaata ataatgaatt ttatataaga gtaaaaaaac aagaacttga tttttccaag
     1861 gctagtacag atgaatacaa tgttttattt ttaaagacag acaaagtagg cgatggcaaa
     1921 ttaggagaaa atttacttgt aggtttttta agtactttaa aaaatgtaga aaatatccca
     1981 agtaaaattc tttgtgtcaa tgaaagtgtt tttatcaatg tagatgagaa ccatagggct
     2041 catttagcaa tgaaagaact tgaaaaatta ggtgttgaga ttataagctg tggagcttgt
     2101 ttagaatttt ttggaaagag caaggagctt aagataggaa gcattggcaa tgcttatgag
     2161 attttaaatg agctttgtgg caaggcaaaa atcatcactt tataaggaaa atatggaata
     2221 caaaaaccag aatctaacgc actttgtaaa agcagcaggt tgagcagcga aattaagccc
     2281 gggtggtctt aaaacaattt taaatttcat gcaaacaagc ccagctttac tcagtgatat
     2341 cggcaataat gaagacgcaa gtgtttttca aattagtcct gaattagcct tagtgcaaac
     2401 gcttgatttc atcacaccta tagtagatag tgcttatcat tttggtgcta ttgctgcagc
     2461 caatgcctta agtgatgtgt ttgctatggg tgcagaggtg attaatgctt taaatatagt
     2521 gggttttgat acttgccatc atgaattaaa tgtcttgcaa gaattattac aaggtgcaaa
     2581 tgacaaggtt caagaatgtg gtggcattat cgtgggtgga catactatag aaagtggtga
     2641 gcttttcttt ggacttagtg taacaggaaa ggtacaccct aaaaaattta ttgctaataa
     2701 taccgctaaa gaaggggatt tgattctttt aaccaagcct ctagggacgg gtattttaag
     2761 tacagcttta aaagctcaaa tgttagaaga aaaacattta gatcgtatgc ttgaaagcat
     2821 gatgggttta aattataaat ccagccaaat tgcacttcgt tttggggtta atgcgatgag
     2881 tgatgttacg ggctttggtt tcttaggaca tttaagagaa atgttaaatg atagcatttc
     2941 atttatgatt tttaaagata aacttcctta tttagagggc gtaaaagaat attttgatat
     3001 gggtttgatt cctggtggag cttataaaaa tttagatttc attcaagagt tttaccctgg
     3061 tttaaatgag gaagatttac tgctttgtga tcctcaaact tcaggagggc ttttaatttc
     3121 tatagaagag aaaaaggctt tagaatgtct taaggcttta gaagatgaaa atattaaagc
     3181 caaaattgtt gccaaagcag tagctaaaca agatgataga tttatatttt ct
//
LOCUS       DBBXOW010000112         3051 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.113, whole genome shotgun sequence.
ACCESSION   DBBXOW010000112 DBBXOW010000000
VERSION     DBBXOW010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.113"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            29..613
                     /locus_tag="ACJE1S_001851"
     CDS             29..613
                     /locus_tag="ACJE1S_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HGG0807367.1"
                     /translation="MQTIDQIFQAQIEIKKSTFLSYLCPFKDFKNLLVNLKKEHPKAV
                     HFVYAYRTLNEYNQIIEDKSDDGEPKGTSGIPSLNVLRGYDLVNTAVITVRYFGGTKL
                     GTGGLVRAYSDAANAAINNASLLTFEFKKNIKIAIDFKNLNRFEHFLRTHSLEFERDF
                     KNEKVILSLNLNEEEEQKFEIFCAQFTPFEIEKL"
     gene            complement(645..1022)
                     /locus_tag="ACJE1S_001852"
     CDS             complement(645..1022)
                     /locus_tag="ACJE1S_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807368.1"
                     /translation="MQVSYKTISSYEYDAISGQYKQVDKQVEDYSSTSDSDFMDILSK
                     LEENSGISSTEENLQNNTQSSNSNSSQYAQMSSMYAYRFRQNEGELSLKAQSASVHND
                     LLNQNANGQNKDSSLLGDLLNAI"
     gene            complement(1073..1408)
                     /locus_tag="ACJE1S_001853"
     CDS             complement(1073..1408)
                     /locus_tag="ACJE1S_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807369.1"
                     /translation="MMAKFRIQYSAGFGHFTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYNTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKIRDENCKRAKEEFIRDNELD
                     VEHLPTHGD"
     gene            complement(1398..2975)
                     /locus_tag="ACJE1S_001854"
     CDS             complement(1398..2975)
                     /locus_tag="ACJE1S_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HGG0807370.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCEIRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLELKGISKAYDKELFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIANAIAPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVALCISHDRELVSAFANRIWHLKDGE
                     LTDFRGTYQEFLGENDG"
BASE COUNT         1012 a          592 c          399 g         1048 t
ORIGIN      
        1 aatcataata ccaaataaaa aggcgaaaat gcaaacaatt gatcaaattt ttcaagcaca
       61 aattgaaatt aaaaaatcta cttttttatc ctatctttgc ccttttaaag attttaaaaa
      121 tttgcttgta aatttaaaaa aagaacaccc caaagccgtt cattttgttt atgcttatcg
      181 aactttaaat gaatacaatc aaatcataga agataaaagt gatgatggcg agcctaaggg
      241 cacttcaggc ataccttctt taaatgtttt aagagggtat gatcttgtca acactgcagt
      301 catcactgta agatattttg gtggcaccaa acttgggaca ggaggacttg taagagctta
      361 tagtgacgcg gcaaatgcag cgattaacaa tgcctccttg ctaacttttg aatttaaaaa
      421 aaatatcaaa attgccatag attttaaaaa tctcaatcgc ttcgaacatt ttttaagaac
      481 tcactctttg gaatttgagc gagactttaa aaatgaaaaa gtgattttaa gcttaaattt
      541 aaacgaagag gaagagcaaa agtttgaaat cttttgcgcc caatttacac cttttgaaat
      601 agagaaatta taatctatct taaagcctcg tttgaggctt taatttaaat cgcgttaagt
      661 aaatcaccta aaagactact gtctttattt tgtccatttg cattttgatt taaaagatca
      721 ttatgcacac tcgcactttg agcttttaaa gaaagttcgc cctcgttttg cctaaaacga
      781 taagcataca tgcttgacat ttgtgcgtat tgagaggaat tagaatttga actttgggta
      841 ttgttttgta aattttcttc cgtactagaa atacccgaat tttcctctaa tttacttaat
      901 atatccataa aatcagaatc agaagtcgaa gaataatctt ctacttgctt atccacctgc
      961 ttatactgac cactaatcgc atcatattca tatgagctaa tagttttata acttacttgc
     1021 atagctttct cctttcaaaa tatgcaaaaa ctatacaagc aaaaagtgtt ccttaatcac
     1081 catgagttgg taaatgctcc acatcaagtt cattatctct tataaattct tcttttgctc
     1141 tcttgcaatt ttcatcgcgt attttacgat attcattgcg tatggtgatt tctttgtcgc
     1201 ttaaaggtct atcttctaaa aaactgatat gaaaataagt atcatcgctt tttgaataag
     1261 tattgtaaaa atctatataa tcaaaataat ccttgccatt gtcaaattcc actacttctt
     1321 ctatataaat agtaggtcca aagcctttat gattttgggt aaaatgtcca aagcctgcgc
     1381 tatactgaat tctaaattta gccatcattt tctcctaaaa attcttggta agttccacga
     1441 aaatcagtca gttctccatc ttttaagtgc caaatacgat tagcaaaagc agaaaccagc
     1501 tccctatcgt gacttataca aagtgcaaca cccttgaaat tatacaaagc ttcaccaagg
     1561 gctatgatac tctcaagatc caaatggtta tcaggctcat ccaaaagtaa aaaatttggg
     1621 cgctctagca tcaaacgcga aagcattaaa cgatgttttt cccctccgct taagctcgct
     1681 gccattttct cttgatcact accactaaaa agcattctac ctaaacactt tcgaatttca
     1741 tccaaatctt tgaatttttc actcataagc cattcgtaaa gtttcaaatt ttcacaaatt
     1801 aaattacttg tatcttgggg aaaatatcca agttctatag tcgctccaag gtgtatagaa
     1861 ccgctatcag gagcaatagc attggcaatg attttagcca aagttgactt gcctacacca
     1921 tttgcaccaa ttaaagcaat tttgtcattt ttttcgattt ttaattctaa atttgaaaac
     1981 aattctttat cataagcctt actaataccc ttaagctcta aaacttcatt tcctatttca
     2041 cgatttgttc taaaaactat acttggatcc ctgcgacttg aaattttaat ctcttcaagc
     2101 tccaatttct ccaaagcctt tgcacgactt gtagcttgtt ttgccttaga agcattcgca
     2161 ctaaaacggc ggataaaatt ttctaattct tctctttctt ttaaagtttt atcgcgctta
     2221 agttcagctt gtttagctaa aagtgttgaa gccatatacc aatcatcata atttcccgca
     2281 aaatcacgaa tttgtttaaa atctacatct aaaattcttg tacaaatttt atttaaaaaa
     2341 tgcctatcat gagaaatcac caccaaggtt ccctcatgtc ttaaaagttc attttcaagc
     2401 caagaaattg cctctaaatc aaggttattt gtaggctcat ctaaaaaaag cacatcggca
     2461 cctaaaaaca aaacttgagc taacaaaact ttaaatttat ccgcactttg taaggtgctc
     2521 attaaagcat caaaatcttt aatctttaaa gaacttaaaa ttttttcaca acgtatttca
     2581 caatcataat ttggatcttc ttcagccgtt attatctcaa gctcacctaa acgctcattg
     2641 atctcatcag taaattcctc gctcatataa agcttttctt tttcttttaa ggcctcatat
     2701 aaacgcttat ttgcacacat cactgcatct ttgatggtgt agttttcaaa agcaaattga
     2761 tcctgtccta aaactgcgat tttcaagcct tcatcaaata ctatttcacc actacttgac
     2821 tcaatttctc ctgaaagaat ttttaaaaaa gtcgattttc ctgcaccatt agctcctatt
     2881 agtccgtatc tttgtcctcg aacaagcttt aaattaacat tttcaaataa aagctgattt
     2941 gcaaaacgca tagtaagatt ttttacttca accatgattt tccttaaatt ttttacttat
     3001 aaaaattttt aagaaattgt agcgaaaaag gcttgaattt ttaattttaa a
//
LOCUS       DBBXOW010000113         2920 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.114, whole genome shotgun sequence.
ACCESSION   DBBXOW010000113 DBBXOW010000000
VERSION     DBBXOW010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.114"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..911
                     /locus_tag="ACJE1S_001855"
     CDS             <1..911
                     /locus_tag="ACJE1S_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HGG0807371.1"
                     /translation="PRFLNLQIFWLKISISFGIYFMLVFILVFFMGRKLAKSFKKILE
                     FLNFINDSKPIILEKSIFKELNLLNKKLLKTKEKILKNTQKNKKQSDKISLKNTQLAS
                     VISAISHELKNPLSVIDLSLEMLKDENLKDEKLKNELLEKISRQSLKLNALTHKLNFV
                     FNLNHEALQMQEFDLFTLCEKIVKNPGFERVILRGKSTRVKADEFLIEQVIINLLSNA
                     LKYSQKEVILIAQDQKISVLDFGKGIEKNQLKFITKKFYKIDTKSNNSFGLGLFLVKK
                     ILSIHKSYLEISSTVSQGSKFSFKLH"
     gene            920..2851
                     /gene="abc-f"
                     /locus_tag="ACJE1S_001856"
     CDS             920..2851
                     /gene="abc-f"
                     /locus_tag="ACJE1S_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protection-like ABC-F family protein"
                     /protein_id="HGG0807372.1"
                     /translation="MALIDLIDASKKFGEKIVLNEANFSANEGEKIAIIGKNGEGKSS
                     LLKALLGTLALDSGRAVRQNGKSIAMLSQTVDFNANLSVKEAIKIELEEIYNTLKEYE
                     ASQSKLEKEPTNKEYLKQMDDLIALIDSKDAWNIEAKITRVLKEFSLLDYSDRLVCTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEDLLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVDQGKLSVFKGGYTNYLEKKTQILESLAKSHETLLKHLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFTGEKIPNRKKMLFEL
                     KNVSKNLGEKALFADFSSRILQGERIAIVGKNGCGKSTFLKMLLGELKQDSGEIKRGE
                     IKIGYFDQARSLVNSDKTLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     SILSGGEKNRVALALLFTEEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFENGAKINILHTLYTEYLENEKEMQEFDDYVSSLDLQEQTRMQKE
                     KSSKKLSYKENEILKNHPEKIEMLEKQISKLNSDLSNPSVYQEIGINTLYEELEQAQK
                     ELEKVESEYFEVLEKSENL"
BASE COUNT         1139 a          358 c          510 g          913 t
ORIGIN      
        1 atccaagatt tttaaatttg caaatttttt ggctaaaaat cagcataagt tttgggattt
       61 atttcatgct tgtttttatt ttagtatttt ttatgggaag aaaactagca aaaagtttta
      121 aaaaaatttt agaattttta aattttatca acgattcaaa acccattatt ttagaaaaga
      181 gtatttttaa agagctaaat ttactaaaca aaaaactttt aaaaacaaag gaaaaaatct
      241 taaaaaatac tcaaaaaaac aaaaaacaaa gtgataagat ttctcttaaa aatactcaat
      301 tagcaagtgt tatttctgct atctctcatg agcttaaaaa tcctttaagt gtgattgatc
      361 ttagcttaga aatgcttaag gatgagaatt taaaagatga aaaactcaaa aacgaattac
      421 tagaaaaaat ttcacgccaa agcctaaagt tgaatgcttt aacacataag cttaattttg
      481 tttttaatct caaccacgaa gccttgcaaa tgcaagaatt tgatcttttt actttgtgtg
      541 aaaaaattgt taaaaaccca ggttttgaaa gagtgatttt acgcggaaaa agcactagag
      601 taaaagcgga tgagttttta atcgagcaag tgattattaa cttactttct aatgctctaa
      661 aatacagcca aaaagaggtt attttgattg cgcaagatca aaagattagt gttttggatt
      721 ttggcaaggg tatagaaaag aatcaattaa aatttattac gaaaaaattt tataaaattg
      781 acactaagag caataattct tttggacttg ggcttttttt ggtaaaaaaa attttaagca
      841 tacataaaag ctatttagaa atttctagca ctgtatcgca gggttctaaa ttcagtttta
      901 aacttcatta aggaaaaaaa tggcacttat tgatttaatt gacgcttcaa aaaaatttgg
      961 ggaaaaaatt gttttaaatg aggcaaattt tagcgctaat gaaggcgaaa aaatagccat
     1021 cataggaaaa aatggagaag gaaaatcaag tcttttaaaa gcgcttttag gcactctagc
     1081 tctagatagc ggcagagcgg taaggcaaaa tggaaaaagt atagccatgc tttcgcaaac
     1141 cgttgatttt aacgcaaatt taagcgttaa agaagccata aaaatcgaac ttgaagaaat
     1201 ttataatact ttaaaagaat atgaagcatc gcaaagcaaa ctcgaaaaag agcctacaaa
     1261 caaagagtat ttaaaacaga tggatgattt aattgcttta atcgatagca aagatgcttg
     1321 gaatatcgaa gctaaaatca cgcgtgtttt aaaagaattc agcctattgg attactctga
     1381 tcgtttggtt tgcactttaa gcggtggtga aattcgcaga gtaggtcttt gtatactttt
     1441 acttaaaaat cctgatattt tattgcttga tgagcctaca aaccaccttg atgtttatat
     1501 gacaagcttt ttggaggatt tgttaaaaaa ttcaaaaatg tgtgtgattt ttatctcgca
     1561 tgatagatat ttcatcgatg caattgcgca taaatgtgta gaagttgatc aaggtaaact
     1621 tagtgtgttt aagggtggtt atacgaatta cctagagaaa aaaactcaaa ttttagaaag
     1681 tttagctaaa agccatgaaa cacttttaaa gcatttaaaa agcgaggaag aatggcttag
     1741 aagaggtgtt aaagcaagac ttaaaagaaa tgaagggcgc aaggagcgta tttttaaaat
     1801 gcgtgaagaa gctaaaaaaa atcctggtgc catcaagcgt ttaaagcttg aaatttcaag
     1861 ggcagcttta aattttacag gagaaaaaat tcctaatcgt aaaaaaatgc tttttgagct
     1921 taaaaatgta agtaaaaatt taggagaaaa agctcttttt gcagattttt caagtcgtat
     1981 tttacaaggt gaacgcattg ctatagtagg caaaaatggt tgtggaaagt ctactttttt
     2041 aaaaatgctt ttaggagaat taaagcaaga tagtggagag atcaagcgtg gagagattaa
     2101 aatagggtat tttgatcaag ctagaagtct tgtaaattca gataaaacct tgcttgaaat
     2161 tttttgccct aatggaggcg acagggttga agtacgcgga aaaaatatgc atgtttatgg
     2221 gtatttaaaa aatttcttat ttcctaaaga atttttagat aaaagcgttt ccattttaag
     2281 tggcggagaa aaaaatcgcg ttgctttggc tttacttttt acagaagaat atgatgtttt
     2341 aatcctagat gagcctacaa atgatcttga tatagcgact attaatattt tagaagagta
     2401 cttgcttagc tttgaaggag ccattttgct agtatctcat gatagatatt ttgtagataa
     2461 aattgctacc aaactttatg cttttgagaa cggcgctaag atcaatattt tgcatacgct
     2521 ttatactgaa tatcttgaaa atgaaaaaga aatgcaagaa tttgatgatt atgtttcaag
     2581 tcttgatttg caagagcaaa ctcgtatgca aaaagaaaaa agtagcaaaa aactaagcta
     2641 taaagaaaat gaaattttaa aaaatcatcc cgaaaaaatc gaaatgcttg aaaaacaaat
     2701 ttctaaactc aatagcgatc tttcaaaccc aagcgtatat caagaaatag gtataaacac
     2761 tctttatgaa gagctagaac aagcacaaaa agaattagaa aaagtagaaa gcgaatattt
     2821 tgaagttttg gaaaaaagtg aaaatctata aatttttatc aataaaatat gaaatttatt
     2881 gacaaaaatt attaaaattt attataattt gacttcaaat
//
LOCUS       DBBXOW010000114         2891 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.115, whole genome shotgun sequence.
ACCESSION   DBBXOW010000114 DBBXOW010000000
VERSION     DBBXOW010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.115"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            119..1525
                     /gene="aspA"
                     /locus_tag="ACJE1S_001857"
     CDS             119..1525
                     /gene="aspA"
                     /locus_tag="ACJE1S_001857"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HGG0807373.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFNISHERLKDFPR
                     FVRALARVKKAAAMANYELGLLDKDIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIALELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMMGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPNYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYAVIGADVTVTFASEGGQLQLNVFEPVIAYSLFNSIVMLEKAMHTLADKCIDGIS
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMSTGKRVADIALERGLLSKEQI
                     DEILTPANMLNPHMEAKK"
     gene            1542..2879
                     /locus_tag="ACJE1S_001858"
     CDS             1542..2879
                     /locus_tag="ACJE1S_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HGG0807374.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVVLGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSKPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVAIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFVPGVLAIAIAVALGFVIAPMLM"
BASE COUNT          921 a          424 c          592 g          954 t
ORIGIN      
        1 gtatttctaa agaataaata ttgttaacca attattaact aaaattacaa tatgattata
       61 ctgatatgag tacaagtaat aaagcttgta tgaaaaatta aattaagaaa ggtttcaaat
      121 gggaacaaga aaagagcacg attttatcgg ggaattagaa atttctgatg aggtttatta
      181 tggagtgcaa acctttagag cggtggaaaa tttcaatatt tcacacgaga ggctaaagga
      241 tttcccacgc tttgtaagag ctttagcaag ggttaaaaaa gcagctgcta tggcaaatta
      301 tgaattaggt cttttagata aagatatcca agatgctatt attaaagctt gcgataaaat
      361 tttagagggc ggatattacg atcaatttgt agttgatatg atacaaggtg gagctggaac
      421 aagtacaaat atgaatgcca atgaagtgat agccaatata gcacttgagc ttatgggtca
      481 taaaaaaggt gaataccaat atcttcatcc aaatgatcat gtgaatttaa gtcaaagtac
      541 aaatgatgct tatcctactg ctttgcatct tgctttgcat gattatctaa gtgatttagc
      601 aaaagctatg gaacatctta aaaaagctta tgagagaaaa gcagaagaat ttaaagatgt
      661 attaaaaatg ggtagaaccc aacttcaaga tgcagtacct atgactttgg gtcgtgagtt
      721 taaaactttt gcagtaatga tgggtgaaga tatacaaaga gttttagaag ctagaaaact
      781 gattttagaa atcaatttag gcggaacagc tataggaaca ggtattaatt ctcatcctaa
      841 ttatccaaaa gtagtagaaa gaaaaataag agaagtaacc ggctttgaat acactgtggc
      901 agaagatctt atcgaagcaa ctcaagatac aggagcttat gtccaaattt caggtgtttt
      961 aaaacgcgtt gcaacaaaac tttctaaagt atgtaatgac ttaagacttc taagcagtgg
     1021 tccaaaatgc ggtcttaatg aaatcaattt gccaaaaatg caaccaggta gttctatcat
     1081 gccaggtaaa gtaaatcctg ttatccctga agtggtaaat caagtttgtt acgctgtaat
     1141 tggagcggat gtaaccgtta cttttgcaag cgagggcgga caattgcagc ttaatgtttt
     1201 tgaacctgta attgcttata gtttatttaa ttctattgtt atgcttgaaa aagcaatgca
     1261 tactttagca gataaatgta tagatggtat tagtgctaat gaaaaaattt gttctgattt
     1321 tgtttataac tcagtaggga tcgtaactgc tttaaatcct tatataggtt atgaaaattc
     1381 agccagtatt gctaaagagg ctatgagtac aggtaagaga gtagctgata tcgcacttga
     1441 aagaggactt ttaagcaagg agcaaattga tgaaatttta actcctgcaa atatgttaaa
     1501 tccacatatg gaagctaaaa aatagcattt taggatttaa tatggatata atgataattt
     1561 tgcaagtaat cgttcttctt ggggcgattt ttattggtat tcgtctaggt ggtattgcta
     1621 taggctatgc aggaggactt ggtgttgttg ttttaggact tgttttggga atgaaaccag
     1681 gaaatattcc ttgggatgta attttaatca tagctgcagc tattgcagct atttctgcga
     1741 tgcaacaagc tggtgggctt gattatatgg ttagggttac agaaaaaatt ttaagatcca
     1801 agcctaaatt tattaattat cttgctccag cttgcggatg gttgcttact atcttagcag
     1861 gaacaggaaa tgcagtattt tctttaatgc ctgttgtagt tgatgttgca aaatctcaaa
     1921 atataaaacc tagtgttcca ctttcattaa tggttgtttc ttcgcaaatt ggaatcactg
     1981 cttctcctgt gagtgcagct gtggtttata tgagcggggt tttagaacca ctaggatgga
     2041 attatccaac tttaattgga atttggatca gtacaacttt tatagcttgt atgcttacag
     2101 cttttatagt gagtttaatc actcctatgg atttaagcaa agatagcgtt tatcaagaac
     2161 gcttaaaagc aggacttgtt aaagatgcag gagctatttt acatggtgaa gataaaccag
     2221 gtgctaaact ttcagtagca atttttctta tcactgtttt ggcagttgta ctttatgcaa
     2281 ccgcaatttc aagcaatatt aaatggattg atcctgttgt ggttccaaga gatgcagcta
     2341 ttatgagctt tttacttact gcagcaactt tgatcacttg gctttgtaaa gttgaaccag
     2401 gtaaaattct tgataccagt gtatttaaaa gtggtatgac tgcttgtgtt tgcgtttttg
     2461 gtgtagcatg gcttggaaat acttttgttg caggacacga agcttctatt aaagaagtag
     2521 caggcgactg ggttaaacaa acccctgcta tgttagcagt tgcatttttc tttgcaagca
     2581 tgcttttata ttctcaagca gcaaccgcaa aggccattgt acctgtaatt atcaccgctt
     2641 taggaatttc agcagcaaat ccgcatgatt cttatatgct tgtagcttgt tttgcagcag
     2701 tttcggcact ttttgtgctt ccaacttatc caaccttact tggtgctgtg caaatggatg
     2761 atacaggaac gactagaatt ggtaaattta tatttaatca ctctttcttt gtaccaggag
     2821 ttttagctat tgcaattgct gtagctttag gctttgtaat cgctcctatg ttaatgtaat
     2881 agcccttttt t
//
LOCUS       DBBXOW010000115         2848 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.116, whole genome shotgun sequence.
ACCESSION   DBBXOW010000115 DBBXOW010000000
VERSION     DBBXOW010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.116"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            173..871
                     /locus_tag="ACJE1S_001859"
     CDS             173..871
                     /locus_tag="ACJE1S_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HGG0807375.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNETIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQPIMQQQTPQASSYQSVSLTSNSEFLKEIKSAIDEALIY
                     PRQARKMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYE
                     KTFHIKIPLVYKLS"
     gene            complement(944..1498)
                     /locus_tag="ACJE1S_001860"
     CDS             complement(944..1498)
                     /locus_tag="ACJE1S_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-guided endonuclease InsQ/TnpB family
                     protein"
                     /protein_id="HGG0807376.1"
                     /translation="MQRKQSRRILKTKKEKTKLSHNFKKTQLKLNKIYEKSSNIKKDS
                     YHKITSKLIQEFDLLAVEDLQIKNMCKRAKLKNIKAKSGLNKSILNTSFYQFSQYLEY
                     KAKHNGKFFIKVNPQYTSKTCSVYGNIKKNLMFKDRVYLCEKCGNTLHRDINAANNIL
                     KRGLKSFGLGISLEDYKLKAFRIS"
     gene            complement(1503..1766)
                     /locus_tag="ACJE1S_001861"
     CDS             complement(1503..1766)
                     /locus_tag="ACJE1S_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG0807377.1"
                     /translation="MNTFFKMRYHRDLPNTYKFNQITIIKNHNKYYLAFSIIYDESNV
                     SLISSKDFDIKKAVDIDLNINEITLSSGELIATNSKLLSRAEY"
     gene            complement(2196..2290)
                     /locus_tag="ACJE1S_001862"
                     /pseudo
     CDS             complement(2196..2290)
                     /locus_tag="ACJE1S_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1059 a          440 c          321 g         1028 t
ORIGIN      
        1 agaagtaaat agcaaaaatt aaatatcttt tagatacaag cttgattatt tgattgttat
       61 ttttctctgt gaaatttgtt tcaaaattta tctttttaaa caatttacca tagaatgtgt
      121 ttaagaaata aagatattta aatcaaaaaa taaaatcata acggagtaaa agatgaaaac
      181 atttataagc aatcataaaa accaatcttc ttttatcact ttatttgttt ttacaccttt
      241 attttttgtt tttctttatt ctaaagattt tttacacata caacccaatg aaactattaa
      301 agaaaataaa tttaatatgg caattaaaca ttttgtacag aattcctccg atatgaaacc
      361 gacacaaccc acacaaacta tacaagagcc ttcgaatgtg caacccaaag aacctgtgca
      421 agaaataaaa aaaataaaac cgagaaagga aaaacctatt gctaaaccta aaaaaataat
      481 ccctccagca aatgcaaaag caataagtca acccaaaaaa gatacaaaca tgcaacaacc
      541 aatcatgcag caacaaactc cacaagccag ctcttaccaa agcgtatctt taactagcaa
      601 tagtgaattt ttaaaagaaa taaaatcagc aatcgatgaa gccctaatct accctagaca
      661 agctagaaaa atgcgtatga gtggggaggt tcttgtagaa tttacctgga caaaagaaaa
      721 gaaattagaa aatttaaaaa tacttaaacc ttcaaaatat gattttctaa ataaaagtgc
      781 tttagaaact atacgcatag cttctaaaaa atttccacaa tatgaaaaaa cttttcatat
      841 aaaaatacca ttggtatata aattaagcta aatctttcac aatatactct atttttttgc
      901 taacgcttag aagtagaagc ttcctagcta aagctaacta gtattagcta attcgaaagg
      961 ctttgagttt atagtcctca aggctaattc ctaacccaaa cgactttaat ccacgcttta
     1021 agatattatt tgcagcatta atatctctat gtaaagtatt gccacatttt tcacaaagat
     1081 acactctatc tttaaacata agattttttt tgatatttcc atatacacta caagttttgc
     1141 ttgtatattg tggattgact tttataaaga atttgccatt atgctttgct ttatactcta
     1201 gatattgaga gaattgatag aatgaagtat taagaataga tttatttaaa ccacttttag
     1261 cttttatatt ctttaattta gctcttttac acatattctt aatttgcaaa tcttcaactg
     1321 ctagcaagtc aaattcttgt atgagttttg aagttatctt gtgataacta tcctttttga
     1381 tatttgaact tttttcatag attttattta attttaattg tgtttttttg aaattatggc
     1441 ttaactttgt tttctccttt tttgttttta atattctcct gctttgtttt ctttgcaatc
     1501 ttttaatatt cagctctact aagtagcttt gagttagtag ctattaactc tccactgctt
     1561 aaggtaatct cattgatatt taaatcaatg tcaactgctt ttttaatatc aaaatctttg
     1621 ctagatatta aagaaacatt tgattcatca taaatgatac taaaagctaa atagtattta
     1681 ttgtgatttt tgataatagt gatttgatta aacttataag tatttggtaa atctctgtga
     1741 taacgcattt taaaaaatgt attcataagt ctaaatatct taaacttagt agtatcacta
     1801 tctttgattt tgtaggcttg attattctaa ttaaagcttt gctttgcaaa tttagagttt
     1861 ttaaatttgg gaaagccttt gtttttatct ctaattgctt gctctaaggc acgagaagat
     1921 taatccttgc ttgttgggtt acaacacttt tatagcttaa ttctcttgct tttataaggc
     1981 tagttttatt gattatctat cttacttgcc tttaaataac tcctatcttt tttatctaaa
     2041 ttcttatttt tatcccactt ctcttgctgt aaatttaaac aaatattata ggcttgatat
     2101 agatgaaaca ttgatgatta ataagctttt gttgttcttt gtttaggtag aattctatat
     2161 ttaaaacctt tggttatttg cattgctttg ttccattagg gctttttttc tttttggtta
     2221 tatatttttt cttagggtaa ttatcttcta tgccttgatt ttctgcatat tttttaagag
     2281 tttctagcat tattccgcat aggtattcta taaaaattac tgattatgtc aaatacctaa
     2341 ctagagccgt acaactaaca ctgtaagcaa ttcatctccc acttaagaag tgagagtttt
     2401 attgaataaa aaaagataaa tttaaagcaa gtaatctttt tttagacaac actaaacctt
     2461 acagcaatat ttatttcatc ataaacaacc cccaaccata aaacctcaat aaacactata
     2521 aaataaactt gagtgattaa aaatccaacc caattattga acaaacccaa gctacataat
     2581 aaaatataaa ctagacatat aaagaacaat tgacacataa aaatagattg aataaataaa
     2641 cctatacaag taaacataaa gattaattat tgatacaaaa gatttaataa ataaaaagaa
     2701 taattgagat ataaaaacat ataaactaaa caactcaaac aaccaaacta ataaacaacc
     2761 atagcttaag ctgacaaccc aaccaatcaa tttaaatata aaactacaaa ttaaatcaac
     2821 ccaagctaat taaacttcaa actaatta
//
LOCUS       DBBXOW010000116         2759 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.117, whole genome shotgun sequence.
ACCESSION   DBBXOW010000116 DBBXOW010000000
VERSION     DBBXOW010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2759
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.117"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..793
                     /locus_tag="ACJE1S_001863"
     CDS             <1..793
                     /locus_tag="ACJE1S_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807378.1"
                     /translation="EHLELGYKKQNSTCSIQEIRLPVFAPIKRYTPSSAIYKDFLKNK
                     RTRTINTQWGNVTIRGSLLTQIHKDILDLIILNNTKIQILKDQRISVDFCISNVLKSY
                     GDAGFNYKWFKNILEDIMGAVIKIKLENQTEFYFHIISAMGYNEKGDFGGIILSKEYL
                     DFYQKTIAINYNKEIQSIVLIENSLVKSIIRFFLSHNQINITLENLLIALGLEINTKD
                     RYFRKIKQEIKVSKNIFSNFKIEFNENKNTFEYKGNNSVNFLFTN"
     gene            768..2264
                     /locus_tag="ACJE1S_001864"
     CDS             768..2264
                     /locus_tag="ACJE1S_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HGG0807379.1"
                     /translation="MSISCSQTKNSLTEEQQAVVDFNIDDILIVNAYAGTGKTSTLVQ
                     FCEARKDFKILYLSYNSSMRKEAETKFKHLKNVEVKTMHSLAYVELEVQKKYKDRLGS
                     LRAIDLFDFIGDLKEDVRSFYATAILKAVRYFCNSNLEPKEFLKEIAKEPSKYEISPK
                     MDLSYISKKTEKLWNDLQSQDCALVYEHDFYLKSYQLSKPKLEYDFILVDEAQDINAC
                     VIDIVLNQKQAKKVFIGDTFQSIYKFRGAVNSLEVLASMPKSHILYLTQSFRCPQSIA
                     TIANSYLGILNAPRDFKGTLKSRKGNNENEAKAIICRTNAKLFDIAVENLNKKLFFVG
                     GVNSYSFDELLDIQNLLFKKHKYIKNQFIAKFADLKELLEYINETKEVDLKQKIFVLF
                     KYVHSDIIKLIKDIEKSCVKKQEQADLILSTGHKSKGLEWNNVEIIDDFLNIKQELEE
                     REQITIAKEELNLLYVAVTRAKNSLNINKDYLLEKDFIEKNLERITIE"
     gene            2261..2473
                     /locus_tag="ACJE1S_001865"
     CDS             2261..2473
                     /locus_tag="ACJE1S_001865"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG0807380.1"
                     /translation="MKIIKKLQEDGSFKEQTYYSVDEVAKMHSVTHTTVRIWISRGVL
                     KSLKLGKGYYISKETILNFQKTDSLS"
     gene            2493..2726
                     /locus_tag="ACJE1S_001866"
     CDS             2493..2726
                     /locus_tag="ACJE1S_001866"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG0807381.1"
                     /translation="MGSTVKDKHVEMRDFLFNKYKKMTFSRKECAEILGVSLQTLDRL
                     TKNKKIESMNITRFVIFSIEEIAKILSGSKQMK"
BASE COUNT         1150 a          328 c          410 g          871 t
ORIGIN      
        1 agaacattta gaactcggat acaaaaaaca aaatagcact tgtagtattc aagaaataag
       61 actacctgtg tttgcaccta ttaaaaggta tactccatca tcagctattt ataaagattt
      121 tctaaaaaat aaaagaactc gcactattaa tacacagtgg gggaatgtca ctataagagg
      181 ctctttactc acacaaattc ataaggatat actcgatctt attattttaa ataatacaaa
      241 aattcaaata ttaaaagatc aaagaattag cgttgatttt tgtattagca atgtgcttaa
      301 aagctatggc gatgcaggct ttaattataa atggtttaaa aatattttag aagatataat
      361 gggagccgta attaaaatta aattagaaaa ccaaaccgaa ttttattttc atattatttc
      421 cgccatggga tataatgaaa agggtgattt tgggggtatt attttaagca aagaatattt
      481 agacttctac caaaaaacta tcgctataaa ttacaataaa gaaatacaat ctattgtttt
      541 aattgaaaat tctttagtaa aatccattat ccgttttttt ctaagtcaca atcaaatcaa
      601 tataactctt gaaaatcttt taattgcttt agggctagaa atcaatacaa aagatcgtta
      661 ttttagaaaa ataaaacaag aaattaaggt aagtaaaaat attttttcta attttaaaat
      721 tgaatttaat gaaaacaaaa atacctttga atataaagga aataatagtg tcaatttctt
      781 gttcacaaac taaaaattct ctcactgaag agcaacaagc tgtggttgat tttaatattg
      841 atgatatatt aatagtgaat gcttacgcag gcacaggaaa aacctctact ctagtgcaat
      901 tttgtgaagc aagaaaagat tttaaaattt tatatctatc ttataactct tccatgcgaa
      961 aagaagctga gactaaattc aaacacttaa aaaatgtaga agttaaaacc atgcactctc
     1021 ttgcatatgt agagttagaa gttcaaaaaa aatataaaga tagattggga agcttaagag
     1081 ctatagattt atttgatttt ataggagatt taaaagaaga tgttagaagt ttttatgcaa
     1141 ctgctatttt aaaagctgtt cgatattttt gcaacagcaa tcttgagcca aaagaatttt
     1201 taaaagaaat agcaaaagag ccttctaaat atgaaattag tccaaaaatg gatttatctt
     1261 atatttcaaa aaaaacagaa aaattgtgga atgatttaca aagtcaagat tgcgctcttg
     1321 tctatgaaca cgatttttat ttgaaatcct atcaactttc aaaaccaaaa ttagaatatg
     1381 attttatatt agtagatgaa gcacaagata ttaatgcttg tgttattgat attgtgctta
     1441 accaaaagca agctaaaaaa gtttttatag gagatacatt ccaaagcatt tataaattca
     1501 gaggtgctgt aaattcctta gaagtattag catctatgcc aaaatctcat attttgtatc
     1561 taactcaaag ctttagatgc ccacaaagca tagctactat tgccaattct tatttgggaa
     1621 ttttaaatgc cccaagagat tttaaaggaa cgctaaaatc aagaaaggga aataatgaaa
     1681 atgaagcaaa agctataata tgcagaacta atgctaaact atttgatata gcagtagaaa
     1741 atttgaataa aaaattattt tttgtaggag gggtgaatag ttatagtttt gatgagttat
     1801 tagacataca aaaccttctt tttaaaaaac acaaatatat caaaaatcag tttattgcta
     1861 agtttgccga cttaaaagaa cttcttgaat atatcaacga aactaaagag gttgacttaa
     1921 aacaaaaaat atttgttctt tttaaatatg tgcatagcga tattataaag cttatcaaag
     1981 atattgaaaa aagctgtgtt aaaaaacaag aacaagctga tttgatatta agcacaggac
     2041 acaaaagcaa aggtttagag tggaataatg ttgaaattat tgatgatttt ttaaacatca
     2101 agcaagaact tgaagaaaga gaacaaatta ccatagcaaa agaagaatta aatcttttgt
     2161 atgtggcagt tacaagagct aaaaattctt taaacattaa caaagattat ttgcttgaaa
     2221 aagattttat agaaaaaaat ttagaaagga taacaataga atgaaaataa ttaaaaaact
     2281 acaagaagat ggaagcttta aagagcagac ttattattct gtcgatgaag ttgcaaaaat
     2341 gcactctgta actcatacaa cagttcgtat atggatctca agaggtgttc taaaaagcct
     2401 caaattagga aaaggttatt acatatcaaa agaaactatt cttaattttc aaaaaacaga
     2461 tagtttatca taaaaaaatt taaggagaaa aaatgggcag tacggtaaaa gataagcatg
     2521 ttgaaatgag agattttttg tttaataaat ataaaaaaat gaccttcagt agaaaagaat
     2581 gtgctgaaat tcttggtgta tctttacaga ctttagatag attaacaaaa aataaaaaaa
     2641 tagaatcaat gaatataact cgttttgtaa tattttctat tgaagaaata gctaaaattc
     2701 tctctggaag caagcaaatg aagtaaattt tttatgtaaa aaataataaa tttttactt
//
LOCUS       DBBXOW010000117         2632 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.118, whole genome shotgun sequence.
ACCESSION   DBBXOW010000117 DBBXOW010000000
VERSION     DBBXOW010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.118"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            150..533
                     /locus_tag="ACJE1S_001867"
     CDS             150..533
                     /locus_tag="ACJE1S_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA transfer protein"
                     /protein_id="HGG0807382.1"
                     /translation="MKKTKQVNIRLTLEEYNLLTVKAQSHGLTLSRYLRDLSMNYPIT
                     CIVDQKVAHDVLNIAGDIGRLGGLFKHWLVRNEDNKVNFSNKRTYNDIDEIVDQILDL
                     QILLKEQAKRIIQNDNQKDSKQKAE"
     gene            496..>2632
                     /gene="traI"
                     /locus_tag="ACJE1S_001868"
     CDS             496..>2632
                     /gene="traI"
                     /locus_tag="ACJE1S_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI/MobA(P) family conjugative relaxase"
                     /protein_id="HGG0807383.1"
                     /translation="MIIKKIPSKKQNKSSFKNLSNYILDKDNNNAKVLVDYMLDKNNE
                     MDKVEGYHFTNCSFDNDEDNINEIINTQKLNTTTKQDKTLHLVVSFQEDENPTLEILQ
                     AIEEEIAKSLGMEDHQRLSVVHSNTNNLHIHIAINKVNPHTLKVINPYNDVRILQETA
                     MKLEKKYNLKLDNHISQKDKQSNKYNIHTMNCNFETWVKEKLSKQVDLMLKDEKTTFK
                     DIKQFLAEYDLEFRERRKGFVIASKSEKLFCKASSIHRELSKQALEKRFKELDLKQEK
                     ENTQNIEEEKREIKERYQRPNKETSKTLWEKYLRIENEKKAELDKELRMLKLRRNEFK
                     TSIPSMKFNKNTFAHVKNQRMIFKNKQKELYQKYKRVSYRDFLISESLSGNEEATRAL
                     RRTKTKINENENTLSSTQEKPKIFENVDYITKEGYAVYKSGFNKAIDKGEMLKVSLIN
                     DKDDKEFLLNSLLMAIDRFGNHLNITGDDKFKRNILEVANDYNLNVSFSDQRMQKIQE
                     ENNNKRQEMKTRKVLKNIIELKIKLTEQDKDIDENIKEKELKALKFSLKKISNSTPSI
                     FKGELKKLGFSYKEIDSMDTESVCIEIDGFIVNSANKEGLIAMNEEIKQTLIDDEEIK
                     RFEKFEHLFLNTNKITDIAKGFYTNRKIDADEYIKRFSMQESKINKVANAISMLSDKN
                     IDIMEKYAKKLEKDLKYQYLKKVEVIENND"
BASE COUNT         1188 a          286 c          407 g          751 t
ORIGIN      
        1 caaattatag tgtattttag taaaatgatt aaaatgtttg taaaaatagc ttaaattttg
       61 ttataattgc ttggagtaat aagacaggat atgtatttgc tatacaaata caaagtttta
      121 tcgctaaagc tctaaaatag gacgccaaaa tgaaaaaaac aaaacaggta aatattagac
      181 tgactttaga agaatataac cttttaacag taaaagcaca aagtcacggc ttaacacttt
      241 caagatattt gcgtgattta tcgatgaatt atcctattac ttgcatagta gatcaaaaag
      301 tcgcacacga tgttttaaat attgcggggg atataggaag attgggcgga ctttttaaac
      361 attggttggt tagaaacgaa gataataaag tcaatttttc aaacaaaaga acttataatg
      421 atattgatga gattgtagat caaattttag atttacaaat acttttaaaa gaacaagcca
      481 aaaggataat acaaaatgat aatcaaaaag attccaagca aaaagcagaa taaatcaagt
      541 tttaaaaatt tatcaaacta tattttagac aaagacaata ataatgcaaa agtattggtt
      601 gattatatgc ttgataaaaa caatgaaatg gataaagtgg aaggttatca ttttacaaat
      661 tgttcttttg ataacgatga agataatatt aatgagatta tcaatactca aaagcttaat
      721 accacaacaa aacaagataa aaccttgcat ttagtagttt cttttcaaga agatgaaaac
      781 cctactttag aaattttaca agcaattgaa gaagaaatcg caaagtcttt aggaatggaa
      841 gatcatcaaa gattaagcgt ggttcattcc aatacaaata atcttcacat acatattgca
      901 attaataaag ttaatccgca tacactaaaa gttattaatc cttacaatga tgttagaatt
      961 ttacaagaaa cagcgatgaa acttgaaaag aaatataatt tgaagttaga caatcatatt
     1021 tcacaaaaag ataagcaaag taataaatat aatatccaca ctatgaattg taattttgaa
     1081 acctgggtaa aagaaaagct ttctaaacaa gtagatctta tgttaaaaga tgaaaaaact
     1141 acttttaaag atattaaaca atttttagct gaatatgatc ttgaatttag agaaagaaga
     1201 aaaggttttg ttattgcttc taagagtgaa aaattgtttt gcaaagcaag tagtatccat
     1261 agggaattat ctaaacaagc tttagagaaa agatttaaag aattagattt aaaacaagaa
     1321 aaagagaata cacaaaacat tgaagaagaa aaacgggaaa taaaagagcg ataccaacga
     1381 ccaaataaag aaacttctaa aacattatgg gaaaagtatt taagaattga aaatgagaaa
     1441 aaagcagagc ttgacaaaga acttagaatg ttaaagctta ggcgaaatga atttaaaact
     1501 tcaataccat caatgaaatt taataaaaat acctttgcac atgttaaaaa ccaaagaatg
     1561 atttttaaaa ataaacaaaa agagctttat caaaaatata aaagagtgtc ttatagagat
     1621 tttttaatta gtgaatcctt atcaggaaac gaagaggcta caagggcttt gcgaagaact
     1681 aaaacgaaaa tcaatgaaaa tgaaaatact ctatcatcaa cccaggaaaa acctaaaata
     1741 tttgaaaatg tagattatat aacaaaagaa ggttatgctg tatataaaag tggttttaat
     1801 aaagccatag acaaaggaga aatgctaaaa gtatctctta tcaatgataa agatgataaa
     1861 gaatttcttt taaattcttt gcttatggca attgatagat tcggaaatca tcttaatatt
     1921 acaggagatg ataaatttaa aagaaatatt ttagaagtcg caaatgatta taatttaaat
     1981 gtaagttttt cagatcagag aatgcaaaag atacaagaag aaaacaataa caagcgtcaa
     2041 gaaatgaaaa ctagaaaggt tttaaaaaat attattgaat taaaaatcaa actcacagaa
     2101 caggataaag atatagatga aaatattaaa gaaaaagaat tgaaagcttt aaaattttca
     2161 cttaaaaaaa tatcaaactc tacaccttca atatttaaag gcgagctgaa aaaattaggc
     2221 tttagctata aagaaataga ttccatggat actgaaagtg tttgtattga aattgacggc
     2281 tttattgtaa attctgccaa taaagaagga cttatcgcaa tgaatgaaga aattaaacaa
     2341 accttgatcg atgatgaaga gataaaaagg tttgaaaaat ttgaacattt atttttaaat
     2401 actaataaaa taacagatat tgccaaggga ttttatacaa atagaaaaat tgatgctgat
     2461 gagtatataa aaagattttc aatgcaagaa agcaaaatta ataaggtggc aaacgctatt
     2521 tctatgttaa gcgataagaa tattgacata atggaaaagt atgcaaaaaa acttgaaaaa
     2581 gatttaaaat atcaatactt gaaaaaggtg gaagtaattg aaaataatga ta
//
LOCUS       DBBXOW010000118         2578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.119, whole genome shotgun sequence.
ACCESSION   DBBXOW010000118 DBBXOW010000000
VERSION     DBBXOW010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.119"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..243
                     /locus_tag="ACJE1S_001869"
     CDS             <1..243
                     /locus_tag="ACJE1S_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HGG0807384.1"
                     /translation="TTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDF
                     AAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ"
     gene            complement(274..2160)
                     /locus_tag="ACJE1S_001870"
     CDS             complement(274..2160)
                     /locus_tag="ACJE1S_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HGG0807385.1"
                     /translation="MREENNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNL
                     DINIIKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALK
                     RIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSY
                     NLHIANDFYEHYKEDILKLNKLNMQTIKNHNLMHGNDPKDALQGIEQFVYNLPQMITH
                     PSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIK
                     PDYVCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQ
                     PFARCLGLDDYGYISGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIH
                     ANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGA
                     RIESAIEKPFKELCEDLLENKKDKKFKKLQVLNTKEQIKLGLKIYQKIKKNMNLSLNF
                     KKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQS
                     ILTPLYLKDIKDESDKQNKLFAWIYAHESLIENIIELLEVQDKRLKIAILPLQDFLEK
                     KKAL"
     gene            complement(2157..>2578)
                     /locus_tag="ACJE1S_001871"
     CDS             complement(2157..>2578)
                     /locus_tag="ACJE1S_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF115 domain-containing protein"
                     /protein_id="HGG0807386.1"
                     /translation="SIEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFK
                     NKLEDIKQMQDLYEILSPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMEL
                     VYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR"
BASE COUNT          834 a          386 c          332 g         1026 t
ORIGIN      
        1 acaacaaatc ttgatcaaat cagagccgac attggttcgg tgcaaaatca acttcaagtt
       61 actataaaca acatcactgt tactcaagtc aatgttaaag cagctgaatc aaccataaga
      121 gatgtagact ttgcagctga aagtgcaaat ttttctaaat ataacatcct tgcgcaatca
      181 ggttcttatg ctatgagtca ggctaatgca gtgcagcaaa atgttttaaa acttcttcaa
      241 taatttctta gatgctttta tgcatctaag cttttaaagt gcttttttct tttctaaaaa
      301 gtcttgcaaa ggcaaaatag cgattttaag tcttttatct tggacttcta aaagttctat
      361 gatattttct atcaaagatt catgcgcata aatccaagca aaaagtttat tttgtttatc
      421 agattcatct ttgatatctt taagatataa aggcgttaat atactttgtt cgtgatgtaa
      481 agtagggcct aaaatttctt gcaaaaagag atatttttta tttgaaagtt tttctttgat
      541 tttgtctata ttttgattta tttgttcaag agagagtttg ttctttccat gggtaagatt
      601 gtgaatttgt ttttgaactt ttttacactc ttttttaaaa ttcaaggata aattcatatt
      661 ttttttgatt ttttgataga tttttaatcc gagttttatt tgttctttag tatttaaaac
      721 ttgtaatttt ttaaattttt tatctttttt attttcgagt aaatcttcac aaagttcttt
      781 aaaaggtttt tctatagcgc tttctatcct agcacctcct tcagtgcaat tataagtttt
      841 acttttgcta aaagcaatga aattttcaaa aatttgtcta aaaagtgtcc aaatttcaga
      901 actttgaact ttgccatttc ctccataagc tgtagtgcta aatctatcta agtccctttc
      961 atagtctcca ttgtgtaaat tagcatggat aaaaccttga gagtgtgttt gcccatcttt
     1021 ggcataagct aaatcctgac ctatgagaat gatgttttta tgtcctaaat tttcagccag
     1081 ttcataagcc atgtgagata cactcatacc tccgctaata tatccataat cgtctagccc
     1141 caagcatcta gcaaaaggct ggccttttat gattaaaatg tattttcttt gatttttttc
     1201 aagataagaa atggtttttt tatgcaccaa agaagctact agaaaaatga tgtctttatc
     1261 aaaatcttta aaatcattat taaaacattc agctactatt tcatcgcgtt ccaacataca
     1321 aacataatca ggctttatac catgtttagc taaaatagga taagaagaat cagcacaaaa
     1381 aattgtagct ttactagcat attttttcaa taaaggcaat tgtttagtaa gagatggtcc
     1441 tgtagaaaca atgatagctg tatcacttac accctttctt ttagaaagta attctttata
     1501 actaggatgg gtaatcattt gaggaagatt ataaacaaat tgctctatgc cttgaagagc
     1561 atcttttgga tcattaccat gcataagatt gtgatttttg atggtttgca tattgagttt
     1621 attaagtttt aaaatatctt ctttatagtg ttcataaaaa tcattagcaa tgtgtaggtt
     1681 ataagaacga taaaacaaat cccctatcaa acgaaaaact ttatccattt taggaagatt
     1741 aatatcatca tgatgtaaaa taatgagtcg ccctaagctt aaatctttgc taaaatctat
     1801 gaaatttaaa gccaaaaaga taagttctaa ttctttttca aagatgatta ttcttttaag
     1861 tgcttgattt tgaagtagaa ttttatataa aattccattt ccaaaaccat aaaaaaaaag
     1921 cacaggatag cgtgtaaaat ctttaaaata ttctaaattt ttttcaagct ctttgatggg
     1981 atcttgatac atttttttta aatttctttt ttttatgata ttgatatcaa gattatcttt
     2041 tccttgagtg aaagtaaatt ctctaagctc ttttagatcc tcaagttttt tgcgtaagtt
     2101 gttatactca aaaccgctta aagcttttaa atttttgtta aaattatttt cttctctcac
     2161 cttctcaccc tttccatcca tttatctaat tttctttctt taagtttttc ttctaaagga
     2221 agtatatttt ttatcaaagc attttcttgt gctttaatat gtccataaac taattccata
     2281 aattctaaat gttcttttat ccaaagaata cttttattaa aagcatcttc tttggtttta
     2341 ggatttaaaa cataaattct agcaagatta agttcaaatt gtgttagtaa aggacttaaa
     2401 atttcatata aatcttgcat ttgttttata tcttcaagtt tatttttaaa ctcatctatt
     2461 ttttcaatag ctaaatttaa atattcttct ttttcattta aactcaaata tacactttgt
     2521 attttttcaa aatcattgct gagtatttta ctaaaatctc tacaatgttc aatacttt
//
LOCUS       DBBXOW010000119         2529 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.120, whole genome shotgun sequence.
ACCESSION   DBBXOW010000119 DBBXOW010000000
VERSION     DBBXOW010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.120"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            1057..1488
                     /locus_tag="ACJE1S_001872"
     CDS             1057..1488
                     /locus_tag="ACJE1S_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807387.1"
                     /translation="MPKTDTKPNAKNRIYKAIETWFTKIYLNKIIHNAKDTSIFINKS
                     SCLAFILSIYGKTDENKSKMTPAVIAHINTTKNTFTAKLKRVKNHESIIDLQAKYPKL
                     DIVSAYQFLTLKDKFKITKSEIQDFETLIDILSKNAQKSKK"
BASE COUNT          951 a          463 c          255 g          860 t
ORIGIN      
        1 gagaaaatta cagcaaaact gcatttattt tgacttattt ttttattttt tttacctatc
       61 atttttcatt ttcattttta ttttttttac ctatctttac tctaaaattt ttgtaaattt
      121 ttcaactaaa aaatactcca aatccaaacc cactaaaaga caaaaaatag ttttaaatta
      181 agtattaaaa agtctaggtt taagcaaggg catttttgta cctaacctaa agcaaagaat
      241 gcctattttt agggacttta atttttaatt aagcattaaa aagtccaagt ttaagcaagg
      301 gcatttttgt acctaaccta aagcaaagaa tgcctatttt tagggacttt aatttttaat
      361 taagcattaa aaagtccaag tttaagcaag ggtatttttg tacctaacct aaagcaaaga
      421 atgcctattt ttaaggactt taatttttaa ttaagcatta aaaagtccaa gtttaagcaa
      481 gggtattttt atgcctaacc taaagcaaag aatgcctatt tttaaggact ttatagcata
      541 gcttattgcg atttgtcttt tttttaatat tgcacctaaa aaatttttgt acccaacatt
      601 cattaacttc gttaataata ttgccatttt tatacccaag ctaaaccgtt tcaccccctt
      661 aaatagaaaa gctttcttct cgccctttat cacctcattt attccccctt ctttatccgc
      721 tacatttcat tgaataattt tcatcattta tcccctcatt tatcaccccc tttataccca
      781 tctcccattc ctccctatct tgcattctac gcattcaaat ctcatcttaa cgctatcctt
      841 aacacaaatc cttatagcct ttatactcat tctttctctc atttatcacc tcatttattg
      901 cctttttctc accactattt caatcctaaa tccctgttta tttctaacca cttttgatat
      961 aaactatacc ccacatataa aaacacttat ttactaccca agtttaataa aaatacggta
     1021 taattccaca aaactaccaa atacatagga gcatttatgc ctaagacaga tacaaaacca
     1081 aacgcaaaaa atcgaatata caaagctata gaaacttggt ttaccaaaat atacctaaac
     1141 aaaataattc acaacgccaa agacactagc atctttatca acaaaagcag ttgcctagca
     1201 ttcatactct caatctatgg caaaacagat gaaaacaaaa gcaaaatgac acctgctgtt
     1261 attgctcata ttaacaccac taaaaacact ttcaccgcca aactaaaaag agttaaaaac
     1321 catgagagca ttatcgattt acaagccaaa tacccaaagc ttgatatagt ttcagcctat
     1381 cagtttctaa cactcaaaga caaattcaaa atcaccaaat cagaaatcca agattttgaa
     1441 acactaatcg atattctttc aaaaaacgcc caaaaatcaa aaaaataacc ctaaaacgat
     1501 aaaacccatt aaaaaaatca ttttagcctt ttaaaggcta attctgtcat tttaaaccct
     1561 atatccattc aagataccca cttgcaatta aaaaaaaaca caaaaaacct acaaaaatcg
     1621 caacacaaaa caaaaaccac agcccatttc aaaactgcaa agcatttttg aaaattcgca
     1681 agaacttcta aaataagccc tagctctcat attatcgcta taaatcaagc acaatcaaaa
     1741 atacacgcca tgaagaaaat tttgcagttt ttagctctaa agtctatttt tgccaaaaat
     1801 cttactcaat aactcgatta tcaataatgc ttaaaaacct acaaaataga tattttaaaa
     1861 gctttttaca aatcgcaaaa tgtcggtaaa acattagcat aatttgccta caacaataag
     1921 ctttaaacgc ctatatttag gctatattat tgcattatgt ccattggctc aactttttac
     1981 attttttcaa aaaagcaaaa gagcctaaaa ataagggttt tagtataata agccctgaat
     2041 attgatattt tattttttta ttacactttt tagtatattt tttcaacaat aaaaattaaa
     2101 ttaatattaa aaaccctata aaatagtatt ttaaataaac tcttttttgt agttaagttg
     2161 taataaagtt gcactcaagt tatagtaaaa ataacattaa ctacatatta actacacttt
     2221 tacttcaaaa aacatgcaaa ttttcacatt tttgtagtta aagtgtagtg aaagtgtaat
     2281 aaagttgaac tcaaattgta gttaagttga aaataattgt aataaagttg aattcaagtt
     2341 gtaattatgt tgtagttaag ttgtagttaa gttgaaaata aaatgcagtt tatcaagtag
     2401 cgtttttttg ccctcaagtt gtagtcaagt tgcactcaag ttgtagttat gttgtagtca
     2461 agttgaaaat aaagtgtgat ttatttcaaa aaaaagtata attaagttgt tttttatgtt
     2521 tattttatg
//
LOCUS       DBBXOW010000120         2436 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.121, whole genome shotgun sequence.
ACCESSION   DBBXOW010000120 DBBXOW010000000
VERSION     DBBXOW010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.121"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(12..662)
                     /locus_tag="ACJE1S_001873"
     CDS             complement(12..662)
                     /locus_tag="ACJE1S_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HGG0807388.1"
                     /translation="MKKLMILPLLATLALADYTQYKPSEDFAKYFTKQSCSQVLDKFY
                     YLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYD
                     RGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
                     NLVNYDSNPQRIKNNIAIPSSYTKILKGDNFKECYQVPNHEVEDENIRSYQIKCQF"
     gene            complement(681..1328)
                     /locus_tag="ACJE1S_001874"
     CDS             complement(681..1328)
                     /locus_tag="ACJE1S_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807389.1"
                     /translation="MNYEALTIKPKVFGAIFVLCLLATFFLIVSFLWIPIGIYIKNFL
                     PSYLSLFYVVVSLFAFGVLVKIFSLFVTMFFVKDKMNKLRSINESLSSLLLSSLIGIV
                     FTASQSFFSLELFLNNKPYNPDNMISVALFSLGNYFVENSYFYYLLGASLIAFLFFRF
                     YLLRNKIVLELETTETTFSEKEKFYLSLLACVILIFVTIGAFFMLFWFLVLLINK"
     gene            complement(1343..1561)
                     /locus_tag="ACJE1S_001875"
     CDS             complement(1343..1561)
                     /locus_tag="ACJE1S_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807390.1"
                     /translation="MKILDLLKVKVYYFCSYKANKEDKIITGSCLVDYSRYFWKKTDF
                     EVVYHLISNQIKKDLKATGIYFTQFHKL"
     gene            complement(1558..2034)
                     /locus_tag="ACJE1S_001876"
     CDS             complement(1558..2034)
                     /locus_tag="ACJE1S_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807391.1"
                     /translation="MNYKKFQTMSKEEYFKKYNVGIRFLFGCDLNQKNETEMISLRVF
                     LPKKHFQEYKNIDIFKTMDLFKKTPLFKELIEQSIKIDFEKREFVMPDFFIKHDIEII
                     PYFTQGGEKEEELSKEKFFELLKQNKIKELNYLCFLFFGSFCKEEYEYFYNQELLK"
     gene            complement(2153..>2436)
                     /locus_tag="ACJE1S_001877"
     CDS             complement(2153..>2436)
                     /locus_tag="ACJE1S_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807392.1"
                     /translation="GFLFNARNTIYKLLSYTKIHAIFINLRTLLFLILVFNADLSYMG
                     TVLFLVDLMTAISIFFAYAQLAYGFSIKDCMFYLVCGKIDKEWLKEIQK"
BASE COUNT          892 a          364 c          260 g          920 t
ORIGIN      
        1 tttgtggagc gttagaattg acacttgatc tgataagatc ttatattctc atcttctact
       61 tcatgattag gcacttggta acattcttta aaattatcac cttttaaaat cttagtgtaa
      121 gagcttggaa tagctatatt gttttttatt ctttgtggat tactatcata attaaccaaa
      181 tttaaaactt ctaaacttcc aagttttaaa gccacttgtc tttctctttt ttcaatttta
      241 ttccaaactc tttgattgat ttgtggattt tgaggagtga tattactcat caaaaaagtg
      301 cttctttgag cttgagttgt ttttctcatt gaagcattag aaagagtgtg tcccctgtcg
      361 taaccgctgt ttttataatc actccatgta gtgcggtatt ttttaggtat atttgtatca
      421 tcttcaaagc gtgggcgttt tttgatttgt tcgcctttta aattttccgc ttctaattta
      481 taagctacag ctttagtgcc tttataatta taatcataac aatttagata ataaaactta
      541 tctaaaactt gtgaacaact ttgcttagta aaatacttag caaaatcttc acttggtttg
      601 tattgagtat aatcagctaa ggctagagtt gctagcaacg gtaaaatcat aagttttttc
      661 attgtttctc ctttatataa ttatttattt atcaatagaa ctaaaaacca aaataacata
      721 aaaaatgccc ctatagtaac aaatatcaat attacacaag ctaatagact aagatagaat
      781 ttttcctttt ccgagaatgt agtttctgta gtttctaatt ctaatactat tttatttctt
      841 agcaaataaa acctaaaaaa caaaaaagct atcaaagaag ctcccaataa ataataaaaa
      901 tatgaatttt caacaaaata attgcctaag ctaaataatg caaccgagat catgttatca
      961 ggattataag gtttattatt taaaaatagt tctaatgaaa aaaatgactg agaagctgta
     1021 aaaacaattc ctattaaaga tgataataat aaagatgaca acgattcatt tatgcttctt
     1081 aatttgttca ttttatcttt tacaaaaaac attgtaacaa ataagctaaa aattttcacc
     1141 aaaacaccaa aagcaaaaag actaacaact acataaaata aagacaagta gctaggtaga
     1201 aaatttttta tataaatacc tataggtatc catagaaaac taactattaa aaaaaacgtt
     1261 gccaataaac acaatacaaa aattgcccca aaaacttttg gcttaatggt taatgcttca
     1321 taattcattt taattctccg atttataatt tatgaaattg cgtgaaataa ataccagtag
     1381 cttttaaatc tttttttatt tgattagaaa taagatgata aacaacttca aaatctgttt
     1441 ttttccaaaa atatctacta taatctacta aacaactgcc tgttataatt ttatcctctt
     1501 tatttgcctt ataactacaa aaataataaa ccttgacttt caataaatct aatattttca
     1561 ttttagtaac tcctgattat aaaaatactc atactcttct ttacaaaaag agccgaaaaa
     1621 taaaaagcat aaatagttta attctttaat cttgttttgc tttaaaagtt caaaaaattt
     1681 ctctttgctt aattcttctt ctttttcgcc accttgcgta aaataaggaa tgatttctat
     1741 atcatgttta ataaaaaaat caggcattac aaattctctt ttttcaaaat caatcttaat
     1801 gctttgctct attaattctt taaataatgg tgttttttta aataagtcca ttgttttaaa
     1861 aatatcaatg tttttgtatt cttgaaagtg cttttttggc aaaaaaactc taagacttat
     1921 catctcagtt tcattttttt gattgagatc gcacccaaac aaaaacctaa ttccgacatt
     1981 atatttttta aaatattctt ctttgctcat tgtttgaaat tttttataat tcattttcta
     2041 taaatccttt ataaactgcc caaaatttca tttttaaaaa tgcaaattaa agcgataatt
     2101 gctataaaaa ttgcataaga aaatatttct tttttaatta atttttcttc agtcattttt
     2161 gtatctcctt taaccattct ttatctattt ttccacacac aagataaaac atacaatctt
     2221 taattgagaa accataagct aattgagcat aagcaaaaaa tatagatata gctgtcatta
     2281 aatcaactag aaataaaact gttcccatat aagatagatc cgcattaaat accaatatta
     2341 aaaaaagtag agttcttaaa ttaataaaaa tcgcgtgaat ttttgtgtaa cttaatagtt
     2401 tgtatattgt atttctagca ttaaataaaa atccac
//
LOCUS       DBBXOW010000121         2354 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.122, whole genome shotgun sequence.
ACCESSION   DBBXOW010000121 DBBXOW010000000
VERSION     DBBXOW010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.122"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            28..1047
                     /gene="mutY"
                     /locus_tag="ACJE1S_001878"
     CDS             28..1047
                     /gene="mutY"
                     /locus_tag="ACJE1S_001878"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HGG0807393.1"
                     /translation="MQKQMIQNLQDKLLLWYDKNGRKNLPWRNLESKDCDERLKDIDR
                     AYGVYISEIMLQQTQVKSVLEKFYFPFLQKFPTLQSLAKANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFEGKLPKKLDELKNLSGIGTYTAGAIACFAYDQKVSFVDGNIRRV
                     LSRLFALENPKMSELERKAKELLNLADAFNHNQALLDIGALICVSKNAKCGICPLYDF
                     CQGKFNTELYPGIKKTSYENANLSLFVFEWDKKFAIQKSQDKLYKGMYNFPFFKKEEG
                     EIFKNMKLLGEFKHHYTKYKLNIKVYHQILKEENKNYQFKSLKELESTALSILSLKAL
                     RLIKL"
     gene            complement(1033..2295)
                     /locus_tag="ACJE1S_001879"
     CDS             complement(1033..2295)
                     /locus_tag="ACJE1S_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG0807394.1"
                     /translation="MQELTRAKKIRSIVAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPIVQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVVSVVLMALGSFMIAAL
                     PSKDVVGDFAIILLLLARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMLFFFSIDEMKDYAWRILFVVGGILALGSLLVRKVMNESATQIHKHE
                     DRGTLKALFTSSWKQFLMVLGITAGGSLAFYTITTYTKTFMENSGMDKTLVNNLFLGA
                     LFILMIIQPLFGYIGDKIGHKRSLIIFCILAFVGIYPIFNLISSNAQSNASLVFILVV
                     LLFIILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAIFGGSAPWVALQFKNAGIE
                     NGFFVYIAVLTLLMFIATLCLPKKSELN"
BASE COUNT          867 a          385 c          400 g          702 t
ORIGIN      
        1 tatgcaattt ttgttatact ctaacccatg caaaaacaaa tgattcaaaa tttacaagat
       61 aaattacttc tttggtatga taaaaatgga cgcaaaaatt tgccgtggcg caatttagaa
      121 agtaaagatt gtgatgaaag attaaaagat attgatagag cttatggagt ttatatcagt
      181 gaaattatgc tccagcaaac tcaggtaaaa tcagttttag agaagtttta ttttcctttt
      241 ttgcaaaaat ttcctacctt acaaagttta gctaaggcaa acgaagatga gcttttaaag
      301 gcttggcagg ggcttgggta ttacactcgt gctagaaatt taaaaaaagc agctttagag
      361 tgtgtggata aatttgaagg caaattaccc aaaaaacttg atgaattaaa aaatttaagt
      421 ggtataggaa cttataccgc aggagccatt gcttgttttg cttatgatca aaaagtttct
      481 tttgtagatg gcaatatacg ccgtgtgctt tcacgccttt ttgccttgga aaatccgaaa
      541 atgagtgagc ttgaaagaaa ggctaaggag cttttaaatt tagcagatgc ttttaatcac
      601 aaccaagcct tacttgatat aggtgcttta atatgtgtga gtaaaaatgc aaaatgtgga
      661 atttgcccct tgtatgattt ttgccaagga aaattcaata cagagcttta tcctggaatt
      721 aaaaaaacat cttatgagaa tgcaaactta agtctttttg tatttgaatg ggataaaaaa
      781 tttgctatac aaaaaagtca agataagctt tataagggta tgtataattt tccttttttt
      841 aagaaagagg aaggcgaaat ttttaaaaat atgaaattgt taggagagtt taaacatcat
      901 tatacaaagt ataaattaaa tattaaagtt tatcatcaaa ttttaaaaga ggaaaataaa
      961 aattatcaat ttaaaagctt aaaagaatta gaaagtaccg cactttcgat actttcttta
     1021 aaggctttaa gattaattaa gctctgattt tttaggcagg cacaaagttg ctataaacat
     1081 aagcagagta agcacggcga tataaacaaa aaagccattt tctattcctg catttttaaa
     1141 ttgtaaagcc acccaaggtg cagatcctcc aaagatggca ttagatatcg cataacccaa
     1201 gcctgtgcct aaggctctta catgttcagg gaaaagtttg gctttaaaaa ttccagccac
     1261 tgaagtataa aaacttagaa taataaataa aagcaccact aagataaaca ctaaagaagc
     1321 attgctttga gcattgcttg atataagatt gaaaatagga taaattccta caaaagctaa
     1381 gatacaaaag ataattaagg atcgcttatg tcctatctta tcgccgatat atccaaaaag
     1441 cggttgtata atcataagta taaataaagc acctaaaaag agattattaa ccagtgtttt
     1501 atccatacct gaattttcca taaaagtttt ggtataggta gtgatagtat aaaatgccaa
     1561 agatccacct gcagtgatac caagtaccat taaaaattgt ttccaagagc ttgtaaataa
     1621 agctttgagt gtccctctat cctcatgttt gtgaatttgt gtcgcgcttt cattcatcac
     1681 tttgcgcaca agaagagagc caagggctaa aattccaccc acaacaaaaa gtattctcca
     1741 agcataatct ttcatttcat caatgctaaa aaagaaaagc attatactaa tactagctac
     1801 tgctaaaagc tgtccgccta tgagggttac gtattggaaa gaagagtaaa aaccccgctt
     1861 gccttctgtg gcaagttcgg aaagataggt cgctgctatg ccgtattccc cacctacact
     1921 tagtccctgt atgagtcttg caagtaaaag caagataata gcaaaatccc ccaccacatc
     1981 tttactaggt aaagctgcta tcataaaaga gcctaaagcc attaaaacca cagatacaac
     2041 catggatttt ttacgaccca ctttatcagc taaagaacca aaaagccaag agcctatagg
     2101 acgcataaaa aagcccgcag caaagactcc aaaagcattg atttgctgca cgataggatt
     2161 atcagaggtt gaaaaagtat gagcaaaata agttgctgta aaagcataaa tataaaaatc
     2221 aaaccattct accaaatttc cgctacttgc agctacaata gaacggattt ttttcgctcg
     2281 agtaagttct tgcataaaat ttccttcatt ttaaagtttt aattttttca agtataatgt
     2341 ggattttatt taaa
//
LOCUS       DBBXOW010000122         2313 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.123, whole genome shotgun sequence.
ACCESSION   DBBXOW010000122 DBBXOW010000000
VERSION     DBBXOW010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.123"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            35..298
                     /gene="rpsT"
                     /locus_tag="ACJE1S_001880"
     CDS             35..298
                     /gene="rpsT"
                     /locus_tag="ACJE1S_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HGG0807395.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAAKNDK
                     NAANEALKIANKSIHAMVSRGFLKKQTASRRVSRLALLVNKIA"
     gene            315..1382
                     /gene="prfA"
                     /locus_tag="ACJE1S_001881"
     CDS             315..1382
                     /gene="prfA"
                     /locus_tag="ACJE1S_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HGG0807396.1"
                     /translation="MLASKLDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEP
                     IVLKAKEYLKTLDSIEENKTLLNDAELGELAKEELKNLEELKPKLEEELKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGAGAFSRLKYEGGTHRVQRVPQTESQGRIHTSAITIAVMPEVDDIEIEINPNDL
                     KIDVMRSSGHGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAQESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAILQDGLF
                     DEVIEPLIAHYQAESLQEQNL"
     gene            complement(1413..2168)
                     /locus_tag="ACJE1S_001882"
     CDS             complement(1413..2168)
                     /locus_tag="ACJE1S_001882"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004392 - heme oxygenase (decyclizing)
                     activity [Evidence IEA];
                     GO_process: GO:0042167 - heme catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HGG0807397.1"
                     /translation="MSFESIISHMNDHHQSNLIDLCKKFGAVKDPKGVRLVGVDFEGL
                     DIAYNDKENLRIEFPKKANEETLKDAIIELCMSAKTKKDLSGVAREAKEFMLSFNSVS
                     LATLSADKEVVCSYAPFVNTPWGNYIYISEVSEHFNNIKENPNNIEIMFLEDESKAAS
                     VILRKRLRYKVKASFIERGEVFDKIYDEFEKQTGGEGGIKTIRNMLDFHLVKLEFQKG
                     RFVKGFGQAYDIENENVTHVGANSSPHKFPHKH"
BASE COUNT          828 a          411 c          369 g          705 t
ORIGIN      
        1 taatttagtc tttaatttca aaaaaggaaa ataaatggca aaccacaaat ctgctgaaaa
       61 aagagcaaga caaactatca aaaaaacaga aagaaataga ttttatagaa caagacttaa
      121 aaacatcact aaagccgtaa gagaagctgc tgctaaaaac gataaaaacg ctgctaatga
      181 agctttaaaa attgcaaaca aaagcattca cgctatggta agtcgtggct ttcttaaaaa
      241 acaaacagcg tctcgtcgtg taagtcgcct agctcttcta gtaaataaaa ttgcataatc
      301 tttcataatt tttaatgtta gctagtaaac tagatccttt tttaaaacgc tttgaagagt
      361 taaattctct tcttagtagt tctgatatca tcagtgatat cagtaaaatg actgcgcttt
      421 ctaaagagca aaagaattta gaacccatcg tcttaaaagc taaagaatac ctaaaaactc
      481 tagatagcat agaagaaaac aaaactttgc ttaatgatgc tgagcttgga gaacttgcaa
      541 aagaagagtt aaaaaattta gaagaattaa aacccaaact cgaagaagag cttaaaattt
      601 tgctattacc caaagatccg aatgatgaaa gaaatatttt tcttgaaatt cgtgcaggaa
      661 caggcggaga tgaagcttct ttatttgtag gcgatcttgt taaagcctat gcaagatatg
      721 ctgaaaatcg tggctataaa cttgaaatcg ttagttctag cgaaggaagt gtgggcggtt
      781 ttaaagaaat tatcatgcta gttaaaggtg caggagcttt ctcaagactt aaatatgagg
      841 gtggaacaca tcgcgttcaa cgcgttccac aaaccgaatc tcaaggacgc atacacactt
      901 ctgctataac tatagcggtt atgcctgaag tagacgatat agagatagaa atcaatccca
      961 atgatcttaa aatagatgtt atgcgctctt caggacacgg ggggcaaagt gtaaatacta
     1021 cagattctgc tgtgaggatc actcaccttc ctacaggtat agttgtagtc aatcaagatg
     1081 gaaaaagcca gcataaaaat aaagaaagtg ctatgaaagt cttaaaagca agactttacg
     1141 aaatgcaaga aagcgagcgt ttggctcaag aaagcgaagc aagaaaatcc caagtaggaa
     1201 gcggcgatag aagtgagcgc atacgcactt ataattttcc acaaaatcgt atcagcgacc
     1261 atcgcatcaa tcttacccta tatcgtttag atgctatttt acaagatggg ctttttgatg
     1321 aagttatcga acctttgata gcacattatc aagcagaatc attacaagag caaaatttat
     1381 agtttcatta gtcttgaaaa caagactaat gattagtgtt tatgcgggaa tttgtgcggg
     1441 ctgctatttg caccaacatg ggttacattt tcattttcta tatcataagc ttgtccaaaa
     1501 ccttttacaa aacgaccctt ttgaaattca agttttacaa gatggaaatc aagcatattg
     1561 cgtatggttt ttattccgcc ttcgccgcct gtttgttttt caaattcatc ataaatttta
     1621 tcaaacactt ccccacgctc gataaaacta gccttaacct tataacgcaa tcttttacga
     1681 agtataacag aagctgcctt gctttcatcc tctaaaaaca ttatttctat attgtttgga
     1741 ttttctttga tattattaaa atgctcgctt acttcactga tataaatata atttccccat
     1801 ggagtattta caaacggtgc ataagaacaa accacctctt tatctgcact taaagtcgct
     1861 aaagaaaccg aattaaaact caacataaac tcttttgctt ctcttgccac tccgctaaga
     1921 tcttttttag tctttgcact catacaaagt tcgataatag catctttaag ggtttcttcg
     1981 tttgcttttt taggaaattc tatgcgtaaa ttttctttat cattataagc tatatccaag
     2041 ccctcaaaat caactccgac caatcttact cccttaggat ccttcactgc cccaaatttt
     2101 ttacaaagat cgatcaaatt ggattgatga tgatcgttca tatgagaaat aatactttca
     2161 aaactcatta tctttatcct ttctttaaat ttatagaaca aaatataagt taaaaatggt
     2221 atcaattatc aaattaaaaa ttacttaaaa agattaaaat cgtttaattt tcaaaaattt
     2281 attctaattt aagcttataa aagataaatt ttc
//
LOCUS       DBBXOW010000123         2283 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.124, whole genome shotgun sequence.
ACCESSION   DBBXOW010000123 DBBXOW010000000
VERSION     DBBXOW010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.124"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            138..1513
                     /locus_tag="ACJE1S_001883"
                     /pseudo
     CDS             138..1513
                     /locus_tag="ACJE1S_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
     gene            complement(1510..>2283)
                     /locus_tag="ACJE1S_001884"
     CDS             complement(1510..>2283)
                     /locus_tag="ACJE1S_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta domain-containing
                     protein"
                     /protein_id="HGG0807398.1"
                     /translation="FFSLLNADELDNALKNNQNKWQKFNYQATQKAPTIKEENIDFKS
                     ALNGILSNVLENKNGIDKTDGNLDFQNENVQIKNLNSLYEGENNSLLFQKEFYATQDS
                     YNYSGGLINRYEKDDFLLGINGFIDGQKEQKESKSFGAELGYYQFVKAYSNYYVPNEA
                     DENLQFGVSFTIPSYSAFIFDISKDSEKINYQVSYSPYSVLSLKILRRDFSANEAIDD
                     TVLQVGFSFNFNESFVKQLRKKDNALQEVNRYDFLQRVR"
BASE COUNT          735 a          359 c          355 g          834 t
ORIGIN      
        1 gagaaattta gtaacacgat taaaaaaatt gattttacta aaaacttgtt ttaattattt
       61 aaactatgtt ctatttattt tttgctaaac ttttagaatt aacttaatct ctaaaagtgg
      121 aattataagg agttattttg gaaactttaa gtcaaacctt tgcagaaaga aaacctccat
      181 tatataaacg tatgtttaaa agtttgggtt tttgggttat tgtaggtatt gttgcaggca
      241 ttgtgcttgg ctatgtaaat aaagaaatgg ctatagcgag taaacctgga gttgattatt
      301 ttataagcgc tttaaaagtt cttattggtc ctattatttt tgttacccta gttttaggta
      361 tcattagcct tgaaagcctt aaaaaagttg gaagtatagg tgctaaagca gttatttatt
      421 ttgaagttgt aagtacctta gcgcttgctt taggtatttt tatggcaaac ataatgcaac
      481 ctggtcacgg gatgaatctt gatccaaaac aacttgatac tacaagcgtg caaaaataca
      541 tttctcaaac aactgaagta agtgcaagtt cagagatcat gcatatttta caagatgcta
      601 tgccaaggga tatcataact ccttttaccg agggcaaaac tatgcaagtt ttagttattg
      661 ctatcattac agctcttatt atttctttaa tgagaataga agatagacaa gctattcaaa
      721 gagttcttga agtaattcaa aactttgtct ttaaaatttt acaagttatc atgtatttta
      781 gtccagttgc tgctttttcg gctatggcgg tacttatagc ccaatacggt ttaggctctt
      841 taattaatct tgcatattta ttactagtta tgcttgtatc atgtcttatt tttatttttg
      901 gaattttagg tttaatttgt tattttgcaa aagtcaatat atttaaattt atgcgcttta
      961 tttctagaga agtacttata gtatttgcaa caagctctag cgaatccgct cttgctcctt
     1021 tgatgagaaa acttgaaaaa gcaggtcttt ctaaggccac tgtcggactt gttttaccaa
     1081 caggttatag ttttaatctt gattgtacaa tatataccta gctatgagtt tgattttctt
     1141 agctcaagct ttcaatgtaa atttaagctt agctcatgaa ataagtattc taatagtctt
     1201 gatgatagct tcaaaaggtg cagtaggtgt tacaggatca ggatttattg ttcttggaag
     1261 tactctagcc gctttaggca atatggaaat ttctgaagca aatgcaactt tagcacaagt
     1321 tttacctgta gctgcgatag gagttctttt aggggttgat aaatttatgt cagaaatgag
     1381 agcggttgga aatctttgtg gaaattcagt tgcagcttta atcgtagcaa tatgggataa
     1441 gcaaattgac tgggaaaaat tccgctacgc tctagataat ccagaaaaat tccacaatgc
     1501 tggtatgcat taacgcaccc tttgcaagaa gtcataacga ttaacttctt gcaaggcatt
     1561 atcctttttt ctaagttgct tcacaaagct ctcattaaaa ttgaaactaa aacccacctg
     1621 caaaacagta tcgtcaatag cttcatttgc actaaaatca cggcgtaata tttttaaact
     1681 caaaacacta tagggcgaat acgacacttg ataatttatc ttctcactat ccttgctgat
     1741 atcaaagata aaagcactat aagatggtat agtaaaactt actccaaact gcaaattttc
     1801 atctgcttca tttggaacat aataattact ataagctttt acaaattgat aataacccaa
     1861 ttcagctcca aagcttttac tttctttttg ctctttttgc ccatcaataa agccatttat
     1921 acccaataaa aaatcatctt tctcataacg attgattaaa ccacctgaat aattataact
     1981 atcttgtgta gcataaaatt ctttttgaaa aagcaaagaa ttattctccc cctcataaag
     2041 cgagtttaaa tttttaattt gcacattttc attttgaaaa tctaaatttc catccgtttt
     2101 atcaatacca tttttatttt ctaatacatt agataatata ccatttaaag cacttttaaa
     2161 atcaatattt tcttccttta ttgtcggtgc tttttgggta gcttgataat taaatttttg
     2221 ccatttattt tgattatttt ttaaggcatt atctaactca tcggcattta gcaaagagaa
     2281 aaa
//
LOCUS       DBBXOW010000124         2042 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.125, whole genome shotgun sequence.
ACCESSION   DBBXOW010000124 DBBXOW010000000
VERSION     DBBXOW010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.125"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1146)
                     /locus_tag="ACJE1S_001885"
     CDS             complement(<1..1146)
                     /locus_tag="ACJE1S_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807399.1"
                     /translation="MTINSANPYQNLALSNPLQNSQALNLIKDKKGSNLEENENNLEN
                     LNYIFNTTSYASEFSFRIDEKGFFEKDLNKIANIPESYNINIKSVRNIAKELTRQDAT
                     LNYNKIDLPYLLNSYYSSLKSVNLEFSENDNANLSRDMISKFATGFSTENGEFLGKIS
                     RIYNNQEELNSALNKTLSLNTLMLDNKITNFHFDRALNNTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNDNELNFFMKPASLDLNAHTNFQKILRGEMDIKDYIKQQNEQK
                     MSFDLYLYVNGVDKKTASQDKLSVFFQQYVNYQKDMDLREFANSSSIFQIYIDENHSE
                     FNSLKEEYQSQNKDLEKLDNANNMRSSSIENFLDRRQKQANLNKILNS"
     gene            1299..1490
                     /gene="rpmI"
                     /locus_tag="ACJE1S_001886"
     CDS             1299..1490
                     /gene="rpmI"
                     /locus_tag="ACJE1S_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HGG0807400.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRGLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            1584..1937
                     /gene="rplT"
                     /locus_tag="ACJE1S_001887"
     CDS             1584..1937
                     /gene="rplT"
                     /locus_tag="ACJE1S_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HGG0807401.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSKFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
BASE COUNT          705 a          272 c          326 g          739 t
ORIGIN      
        1 agaatttaat atcttattta aattggcttg tttttgacga cgatctaaga aattttctat
       61 ggagctagaa cgcatattat tagcattatc tagcttttct aaatctttat tttggctttg
      121 atattcttct ttaagagagt taaattcgct atgattttca tcaatataaa tttgaaagat
      181 agagcttgaa tttgcaaatt ctcttaaatc catatctttt tgataattga catattgttg
      241 aaaaaaaact gaaagcttat cttgagaagc ggttttttta tctactccat tcacataaag
      301 atataaatca aagctcattt tttgttcgtt ttgttgtttg atatagtctt ttatatccat
      361 ttcccctcta aggatttttt gaaaattagt atgagcattg agatccaaac tcgcaggttt
      421 cataaaaaaa ttaagctcgt tatcattttg tgttttgata tcatgataaa taaaattcat
      481 caaaagccct gattttgaaa cttcagcatt tttggttagg taaggtttta aaatttcatt
      541 agatgaggta ttgtttaaag ctctatcgaa gtgaaaatta gtaattttgt tatctagcat
      601 taaagtattt aggcttagag ttttgtttag cgcggagttt aattcttctt gattgttgta
      661 aattcttgaa attttgccta aaaattcccc attttcagta gaaaatccgg tggcaaattt
      721 tgaaatcata tcgcgactta aattagcatt atcattttcg ctaaattcta aattgacaga
      781 ctttagcgag ctataatagc tgtttaaaag atagggtagg tctattttgt tataatttaa
      841 agttgcatct tgtcttgtta attctttggc tatatttcta acacttttga tgttgatatt
      901 ataagattca ggtatattag cgattttatt taaatctttt tcaaaaaaac ctttctcgtc
      961 tatcctaaag ctaaattcac ttgcataaga agtggtgtta aaaatataat ttaaattttc
     1021 taaattgttt tcattttctt ctaaatttga acctttttta tctttgatta aattcaaagc
     1081 ttggctattt tgtaaaggat tggatagggc caaattttga taagggtttg ccgaatttat
     1141 agtcatttta aatctttcaa aaatattgct agttttttat aagcaaaagg tgtgccaagt
     1201 tttttaaata caaaattcag tcaaaaatta gcaaaaattt gctagcattt agcttttctt
     1261 tttgaaaaaa tttaaaaatt tatccgaaag gaaagcgtat gccaaagatg aaaagcgtaa
     1321 aaagcgcagt taaacgcttt aaagtaggta aaaataaaat caaaagaggc tctgctttta
     1381 gaagccatat tttgactaaa aaacctgcaa aaagaatgcg tggtcttcgc acagctaaat
     1441 atgtgcacag cactaatgta aaagctgtag aaaaaatgct aggaatttaa gtttttgaca
     1501 taagtcattc aaactctcct taagttgcta aaaatttaag ggcaagctcc aaaatggacg
     1561 ccactttatg aaaggaaata aaaatggcaa gagtaaaaac aggtgttgta agacgccgca
     1621 gacataaaaa agttctaaaa ttagcacgcg gtttttatag cggacgccgc aaacatttta
     1681 gaaaagcaaa agaacaatta gaaagaagtc ttgtttatgc gtatcgtgat agacgccgca
     1741 agaaaagaga ttttcgccgt ctttggattg tgcgtatcaa tgctgcttgc agattaaacg
     1801 atttaagtta ttctaaattt atcaatggac ttaaaaaagc aggcattgag cttgatagaa
     1861 aaattctagc tgatttagca atgaatgatg ctgctgcttt tgcaaaaatc gcagaagctg
     1921 caaaaaaagc gctttaattt aatgagttaa gatttaaatc ttaactcatg attgtcaata
     1981 taaactgcat ttaaatttta aaatacaact cattaaaaac taattttatt taggatttat
     2041 ta
//
LOCUS       DBBXOW010000125         1780 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.126, whole genome shotgun sequence.
ACCESSION   DBBXOW010000125 DBBXOW010000000
VERSION     DBBXOW010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.126"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..224)
                     /locus_tag="ACJE1S_001888"
     CDS             complement(<1..224)
                     /locus_tag="ACJE1S_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HGG0807402.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDALGI"
     gene            complement(321..>1780)
                     /locus_tag="ACJE1S_001889"
     CDS             complement(321..>1780)
                     /locus_tag="ACJE1S_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HGG0807403.1"
                     /translation="KVYKVVLFDCVAKDLEIQIAMIFDQQSILEYLSLYEMFISSHYY
                     LKYYETSILSLNELCIKSASVAIRNADITCFLPLLTHGQFLQNIPSMLESIPFQRILS
                     QRKNKFENAIVVSAGPSLTKQLPLLKAYQDKAVIFCADGALSMLEKEGIVPDYVLNID
                     FKDCHAMKFFQNKENLKQSIIALECATHPNVARSLNAENCMIVLRNKALYQRFNLNDF
                     GYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFDEEGNSHSKGFDFGEKFEEEHKKY
                     KLKIPAYAGKGEVLTHTTWNDYRIKLEYLFACNDQKAKFYNATEGGARINFTEELSFK
                     ECCEKLLTKEKPKFELPKSLTKNRSDKLLVKFKEKIQKDQENAKRFLDDALALKQILE
                     NILSKDFLLPLEFLEKVYQNIENFNHSLDEDEFIQDEVLRGAFAYRGKMIADVLKLHI
                     KDETHFITAYIKAYHEWLLYFIEKLEQKYKSLSKV"
BASE COUNT          604 a          290 c          236 g          650 t
ORIGIN      
        1 aagataccta aagcatcgtt accattagat atagcttgac ctaaagtatt agcttgagat
       61 cttaaactat ctgctatcgc catccctgaa gcatcatctg ctgcggagtt gattctaaga
      121 cctgaactaa gtctgcttaa agaagcatct aaacttttac tatttaaatc agcgtttgct
      181 ttagcattta aagctgcaac attggtgtta atacgaaatc ccattttaaa tccttttaaa
      241 aaaattcaag ctcatccatg aacttgttaa atgctatatc gtgcaatcaa aaaaatattt
      301 tatactttag taataaaatt tcatactttt gacaaagact tgtatttttg ttctaatttt
      361 tctataaaat aaagcaacca ttcatggtaa gctttgatat aggctgtgat aaaatgtgtt
      421 tcatctttta tatgaagttt caatacatca gcaatcattt ttccacgata agcaaaagct
      481 cctcttaaaa cttcatcctg tataaactca tcttcatcta aagagtgatt aaaattttct
      541 atgttttgat atactttttc taaaaattct aaaggtaaaa gaaaatcttt actgagtata
      601 ttttctaaaa tttgttttaa agctaaagca tcgtctaaaa atcttttagc attttcttga
      661 tctttttgta ttttttcttt gaatttaact aggagtttat cacttctatt tttagttaaa
      721 ctttttggaa gttcaaattt gggtttttct tttgtaagga gtttttcaca acattcttta
      781 aaggaaagtt cttcagtgaa attaatcctt gctccacctt ctgtggcatt gtaaaattta
      841 gccttttgat cattgcaagc aaaaagatat tcaagtttta tacgataatc attccaagtt
      901 gtatgggtta aaacttcacc tttacctgca taggcaggga ttttaagttt atatttttta
      961 tgctcttctt caaatttctc cccaaaatca aaaccttttg agtgtgaatt tccttcttca
     1021 tcaaaggcta aatcttgtcc tatcatgatg atatttttaa atcccaaagc caaagctaaa
     1081 gtataagaaa aatgacttac atgagtaccc gtatctatat agccaaagtc attaagattg
     1141 aagcgttggt aaagggcttt atttcttaaa acaatcatac aattttcagc atttaaacta
     1201 cgcgcgacat taggatgcgt agcacactca agagcgataa tgctttgttt taaattttct
     1261 ttattttgaa aaaatttcat tgcatgacaa tctttaaaat cgatatttaa aacataatca
     1321 ggcactatac cttctttttc aagcatactt aaagccccat cagcacaaaa gatcactgct
     1381 ttatcttgat aagctttaag taaaggaagt tgtttagtaa gagaaggtcc tgcagaaact
     1441 actatagcat tttcgaattt gttttttctt tggcttaaga ttctttgaaa aggaatgctt
     1501 tcaagcatag aagggatgtt ttgtaaaaac tgtccatgtg ttagcaaagg taaaaaacaa
     1561 gtaatatctg cattccttat tgctacactt gcacttttaa tacaaagttc atttaaagat
     1621 aaaatagaag tttcatagta tttaagataa taatgcgagc taataaacat ttcatataaa
     1681 cttaaatact ctaaaatact ttgctgatca aaaatcatag caatttgaat ttctaaatcc
     1741 tttgcaacac agtcaaataa tacaacctta taaactttca
//
LOCUS       DBBXOW010000126         1749 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.127, whole genome shotgun sequence.
ACCESSION   DBBXOW010000126 DBBXOW010000000
VERSION     DBBXOW010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.127"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..486
                     /locus_tag="ACJE1S_001890"
     CDS             <1..486
                     /locus_tag="ACJE1S_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807404.1"
                     /translation="SLQTTLKNKDSLLSFQSQHGTAKQRIQNQLSYKLGQTMIINSKN
                     IFGILFMPVYIISTLLSHKQEQKIYQEKIKKDPSLKLPSLESYPDYKEALKFKNHLSY
                     KLGQALIKANKTWYKGGYVRFLFELRKIYKQKTMKNSLILYKNRDSNKKDTTRSIGGG
                     G"
     gene            674..1411
                     /locus_tag="ACJE1S_001891"
     CDS             674..1411
                     /locus_tag="ACJE1S_001891"
                     /inference="COORDINATES: protein motif:HMM:NF025663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp fold amidoligase family protein"
                     /protein_id="HGG0807405.1"
                     /translation="MEYDISNGQIYKLLSKNIDELSEELKNTNKCSYLPEIYGIYKHT
                     DEIDFDFLPNSFVIKTNHDWGGVVVVNNKAEFLADSSKKIESLTKLQKHLDRNYYDVS
                     KEWHYKNITPRIFIEENLSQKNNDLKDYRFHVFNHKTQFIQVANSAHTCNNLYYPDWK
                     IFPIMYLNKRDSKEIQKPYKLKKMLKLASLLSIDFDYIRVDMYLVDSKIYIGELTFTP
                     NCGKAKIEPAEWDLKLGQMWRSDVFKL"
     gene            1395..>1749
                     /locus_tag="ACJE1S_001892"
     CDS             1395..>1749
                     /locus_tag="ACJE1S_001892"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HGG0807406.1"
                     /translation="MFLNYNILFFCIGCIIGWGAFALPGLLFLDMGLINSIVGLLLGA
                     LFIIIIATNYFKLSQMFPQTGGEFLYTLHFFGKKHGFVCGWFLILAYLCIIPLNLTAI
                     SLLFDHLQFNYLQNNI"
BASE COUNT          672 a          213 c          267 g          597 t
ORIGIN      
        1 tccttgcaaa caactttaaa aaacaaagat agtttactat ctttccaatc ccaacacggc
       61 acagctaaac aaagaattca aaaccaactc tcctataaac taggtcaaac tatgataata
      121 aattcaaaaa atatatttgg tatattattt atgcctgtat atataatatc aactctatta
      181 tctcataaac aagaacaaaa aatctatcaa gaaaaaataa aaaaagatcc ttctttaaaa
      241 ctaccttctt tagaatctta tcctgattat aaagaagctt taaaatttaa aaaccatctt
      301 tcttataaac taggacaagc tcttataaaa gcaaataaaa cttggtataa gggtggatat
      361 gttagatttt tgtttgagct aagaaaaata tataaacaaa aaacaatgaa gaatagtttg
      421 atattgtata agaatagaga tagtaataaa aaagatacaa caagaagtat aggggggggg
      481 ggataggtta gcgttaggat tagatgagca atattttata aaaagacatg agagtttttt
      541 tcattataaa ccagattttc gcaaccccaa gacatttaat gagaaaataa tacataggat
      601 tttatttgac agaagagata tttacacttt tttagcagat aaaatcaaag taaggcttta
      661 tatacaattt atcttggagt atgatatatc aaatggacag atttacaagc ttttatcgaa
      721 aaatatagat gaattatctg aagaactcaa aaatactaat aaatgcagtt atctaccgga
      781 aatatatggt atatacaagc atacagatga gattgatttt gactttctgc ctaattcttt
      841 tgttataaag acaaaccatg attggggtgg agttgtggtt gttaacaata aggcagagtt
      901 tttggcagat tctagcaaaa aaatagagtc tttaactaaa ctacagaaac atttggatag
      961 gaactattat gatgtttcaa aagaatggca ttataaaaat ataactccta gaatatttat
     1021 agaagaaaat ttaagccaaa aaaacaatga tttgaaagat tataggtttc atgtttttaa
     1081 ccataagaca caatttatac aagtagccaa ttctgctcat acttgcaata atttatatta
     1141 tcctgactgg aaaatatttc ccattatgta tctcaataaa cgagactcta aagaaattca
     1201 aaaaccatat aaattaaaaa aaatgttaaa attggcatca ttactatcta ttgattttga
     1261 ttatatcaga gtggatatgt atttggtgga ttctaaaatt tatataggtg agcttacatt
     1321 tacgccaaat tgtggaaaag ctaaaataga gcctgctgaa tgggacttaa agttaggtca
     1381 aatgtggaga agtgatgttt ttaaattata atatattatt tttttgtata ggttgtatta
     1441 ttggctgggg agcatttgct ttaccgggct tattgttttt agatatgggt cttataaatt
     1501 ctatagtagg tttgttgcta ggggcattat ttataattat tattgcaaca aactatttta
     1561 aactttctca aatgtttcct cagactggag gagaattttt atatacttta catttttttg
     1621 gaaaaaaaca tggatttgtt tgtggatggt ttttgatttt agcatatttg tgtatcatac
     1681 ctttaaattt aacagctata tcgttactat ttgatcactt gcaatttaat tacctacaaa
     1741 ataatattt
//
LOCUS       DBBXOW010000127         1737 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.128, whole genome shotgun sequence.
ACCESSION   DBBXOW010000127 DBBXOW010000000
VERSION     DBBXOW010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.128"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            22..240
                     /locus_tag="ACJE1S_001893"
     CDS             22..240
                     /locus_tag="ACJE1S_001893"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807407.1"
                     /translation="MKLEINISVNDIKEIHVEDVVYLYEKLNQEQQDLFLGLINATKN
                     MGENKTIEILKTHFSGLVKDFIQEINKK"
     gene            248..754
                     /locus_tag="ACJE1S_001894"
     CDS             248..754
                     /locus_tag="ACJE1S_001894"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807408.1"
                     /translation="MKLKIDSTGLILLFIILMSVFLINAEYLIKPTYNELYRIFFTIL
                     ASLLSAILVETQDKKFIKECYNFEGIICSIIGSLVISIISSCFIEFNDSLGSASYTVF
                     LAVVDFLTILIAMIGFDRILIICEKDSYVIKRSNDINIESYTQKQNNKILIIDNTQDD
                     LFRISISD"
     gene            825..1025
                     /locus_tag="ACJE1S_001895"
     CDS             825..1025
                     /locus_tag="ACJE1S_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807409.1"
                     /translation="MENKEINLTLSYNEMVIVKEVFQNFVRTNQNINFELGRIKEIEN
                     YLEILKKIENGLNQELKIRTER"
     gene            1039..1536
                     /locus_tag="ACJE1S_001896"
     CDS             1039..1536
                     /locus_tag="ACJE1S_001896"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807410.1"
                     /translation="MDLIYFFLDITWVEAVVTSFFLSFILIAPIYTRLIGVICFIFCI
                     IFVFFGFVIDGGGDREVNLFPPSPYYVEKVVKKYELQEFLYSYPSGLKLEMALKSSTM
                     GFGICLLNKYEGFLCSGYLKYFENKLIGYKNEILEKRSEGKKEDKKAYDGAIERQRNI
                     DNHFN"
BASE COUNT          698 a          159 c          278 g          602 t
ORIGIN      
        1 aataaaaatc aaggagaaaa aatgaaacta gaaataaata taagtgtaaa cgatatcaaa
       61 gaaattcatg tagaagatgt tgtttattta tatgaaaaat taaatcaaga acaacaagat
      121 ttatttcttg ggttaattaa tgccactaaa aatatgggtg aaaataaaac cattgaaatt
      181 ttaaaaactc actttagtgg tttagtaaaa gattttatcc aagaaataaa taaaaaatag
      241 gaaaaaagtg aagctaaaaa tagatagcac aggtttaata ttacttttta taatattaat
      301 gtctgtgttt ttaataaatg cggaatattt aataaagccc acatataatg aattatatag
      361 gatatttttt acaatattag catcactgct ttcggctata ttggttgaaa cgcaggataa
      421 aaaatttatt aaagaatgct acaattttga gggcattatt tgttcaataa taggttcgct
      481 agtaatatca ataatctcat catgttttat agaatttaat gattcccttg gtagtgcttc
      541 atatactgta tttcttgcag tagtagattt tttaacaata cttatagcaa tgattggttt
      601 tgatagaata ttaattattt gcgaaaaaga ttcttatgtt atcaagcgtt ctaatgatat
      661 aaatattgaa agttacactc aaaagcaaaa taataaaata ctaataattg ataatactca
      721 ggatgattta tttcgtattt ctatatcaga ttagagaaat aaagaaaaac attgaaaaat
      781 gcaaaagaaa aattactaaa attaaaaaaa gcaaggaggt tcacatggaa aacaaagaaa
      841 ttaatctaac cctatcttac aatgaaatgg ttattgtcaa agaagtcttt cagaattttg
      901 taagaacaaa tcaaaatata aattttgagc ttggaagaat aaaagaaatc gaaaattact
      961 tagaaatatt aaaaaaaatc gaaaacggct taaatcaaga attaaagata cgaactgaaa
     1021 ggtaggagga ttaacaatat ggatttgatt tatttctttt tggatataac ttgggtagaa
     1081 gctgtagtta catcgttctt tttatcattt attttaattg cgcctatata cacaagactt
     1141 attggtgtga tatgttttat attctgtatt atatttgtgt tttttggatt tgtgattgat
     1201 ggaggaggtg atagagaagt aaatcttttt ccaccaagtc cttattatgt tgaaaaagta
     1261 gtcaaaaaat atgaattgca ggaatttcta tacagttatc cttcaggttt gaagttagaa
     1321 atggcattga agtcatcaac tatgggtttt ggaatttgtt tattgaataa atatgaaggt
     1381 tttttatgct caggctactt aaagtatttt gaaaataagc ttattgggta taagaatgaa
     1441 atattggaaa aaagatctga aggaaaaaaa gaggataaaa aagcctacga tggagctata
     1501 gaacgacaaa gaaacataga taatcatttt aattaaatat agtcaggagc taaaatgaag
     1561 ttattaggta aattaaaaaa agaacaaatt tattttttag gattgttttc gttagttttg
     1621 atgttaatat ctaatatttt taatattgac attttgtggg gtatttcctt atgttttctt
     1681 ataattattt ctttggcttt aattaaaaaa gataagaatt ataaggagta aaaaatg
//
LOCUS       DBBXOW010000128         1730 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.129, whole genome shotgun sequence.
ACCESSION   DBBXOW010000128 DBBXOW010000000
VERSION     DBBXOW010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.129"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            56..667
                     /gene="plsY"
                     /locus_tag="ACJE1S_001897"
     CDS             56..667
                     /gene="plsY"
                     /locus_tag="ACJE1S_001897"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HGG0807411.1"
                     /translation="MENLIIYAIAYLLGSIPFGLILAKQFAQINIQNQGSKSIGATNV
                     LRVVKEKDPALAKKLAIATIVLDFAKATIPLLVLKFLNYDLNLLWTVAVLTVFGHCFS
                     IYLLFEGGKGVATGAGAMIVLLPLELITAFIVWFIVGKIFKISSLASLLALLVFIGSS
                     FIFNYDMQTIKTHAPVFIIAFIIIYKHLPNIKRLVFKEECKVI"
     gene            652..969
                     /locus_tag="ACJE1S_001898"
     CDS             652..969
                     /locus_tag="ACJE1S_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HGG0807412.1"
                     /translation="MQSHINIKMQFKCIIGILKFERKKKQKVCIYLTAKANDFLDYAK
                     VSKKIKKYYKKEQFLTLEESLEFVCAKLHRKFPQIYYIKIKTYKPEIIKNARVGVKLK
                     KFY"
     gene            1048..1719
                     /gene="hsrA"
                     /locus_tag="ACJE1S_001899"
     CDS             1048..1719
                     /gene="hsrA"
                     /locus_tag="ACJE1S_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HGG0807413.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLASWNLPDGDGAELVNTIKHKSPRTSVMIMSAKADKDTEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
BASE COUNT          638 a          236 c          264 g          592 t
ORIGIN      
        1 ttgatttatt tatttttttt gcatataatg cttcaattat ttcttaaggt taataatgga
       61 aaatttaatc atttatgcaa ttgcttatct tttaggctct attccttttg gtttaatttt
      121 agccaagcaa tttgctcaaa tcaatataca aaatcaaggc tcaaaaagta taggcgcaac
      181 caatgtatta agggttgtta aagaaaaaga tccagcttta gctaaaaaac ttgcaatcgc
      241 tactattgtt ttagactttg caaaagcaac tataccctta ctcgtactta aatttttaaa
      301 ttatgattta aatttacttt ggactgtcgc agttttaacg gtatttggac attgcttttc
      361 catctatctt ttatttgaag gcggcaaagg ggttgcaact ggagcgggtg ctatgatagt
      421 acttttacct ttggaactca taacagcatt tatagtttgg tttatcgtgg gtaaaatttt
      481 taaaatttca tccttagcgt ctttattggc tttattagtt tttataggaa gttcttttat
      541 ctttaattat gatatgcaaa ctataaaaac gcatgcacct gtatttatta tagcttttat
      601 aatcatttat aaacacttac ccaatatcaa aagattggtt tttaaagaag aatgcaaagt
      661 catataaata tcaaaatgca gtttaaatgc attataggaa tattaaaatt tgaacgcaag
      721 aaaaaacaaa aggtttgtat ttatcttaca gctaaagcaa atgatttttt agattatgcc
      781 aaggtatcaa aaaaaatcaa aaaatactat aaaaaagaac aatttcttac cctagaagaa
      841 tctttagaat ttgtttgtgc gaaattacat agaaaatttc cgcaaattta ctatattaaa
      901 atcaaaactt ataaacctga aataatcaaa aatgcaagag ttggtgtaaa attaaaaaaa
      961 ttttattaaa ttttgtttaa agatatctaa acatttactt aaactatgtt atactttttt
     1021 aaaaatttct taatgaagga tataatgatg aggattttag ttatagagga tgagattagc
     1081 cttaataaaa ctattataga taatcttaat gaatttggtt atcaaactga ctcttcagaa
     1141 aatttcaaag acggtgaata ttttatcggt ataagacact acgacttagt acttgcaagc
     1201 tggaatttgc ctgatggcga tggtgcagaa cttgtcaata caattaagca taagtctcca
     1261 agaacttctg tgatgatcat gtctgcaaaa gcagataaag atacagaaat taaagcactc
     1321 aaagctggag cagatgattt tgtaaaaaaa cctttagatt ttgatatttt attggccaga
     1381 atagaagcaa gacttagact tggtggtaca aatgtaatca aaatagaaga tttagttatt
     1441 gaccctgatg aagagaaaat aacctataaa ggccaagata tagaacttaa aggaaagcct
     1501 tttgaagttt taactcattt agcaagacat tcagatcaaa ttgtatctaa agaacaactt
     1561 ttagatgcta tttgggaaga acctgaactt gttacgccta atgtaattga agtagcgatc
     1621 aatcaaatac gccaaaaaat ggacaaacct ttaaatatct ctactataga aactgttaga
     1681 cgcagaggat atcgcttctg ttttcctaaa aaatcctaag cattttgcac
//
LOCUS       DBBXOW010000129         1716 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.130, whole genome shotgun sequence.
ACCESSION   DBBXOW010000129 DBBXOW010000000
VERSION     DBBXOW010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.130"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..301
                     /locus_tag="ACJE1S_001900"
     CDS             <1..301
                     /locus_tag="ACJE1S_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807414.1"
                     /translation="EFVKFIFSNLDFICGNFANFVSEDNIIFFPVTTLLIVFTIAICA
                     VWGLSNVLSLSLFIMPIFVAVFYIFNIDISLKNLYSSYFIFLIIINGLLWSANQR"
     gene            298..801
                     /locus_tag="ACJE1S_001901"
     CDS             298..801
                     /locus_tag="ACJE1S_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807415.1"
                     /translation="MKKITIVAYAICFLSGLWFLFSTIKEYFGILSFILGIALIYFGV
                     INIKKISNKVHKNKTEFETLLNTTNDIFALFGSVMLLVFIIFFTFQNEINIKFFSDQG
                     LVIEDDKKISIYFKSKEVKTLDSSKYKDISTMYSDDYVNVIFKNKDDNSSLILRCDES
                     GCKEEKK"
     gene            798..1340
                     /locus_tag="ACJE1S_001902"
     CDS             798..1340
                     /locus_tag="ACJE1S_001902"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807416.1"
                     /translation="MRENILIKKLYVDNDIIRDLYKKSLDFAINEREKAIDFLYKKTS
                     KGTYNLLSEIKITLESLENSINENMILFGKFAFFFKNPKYYTRQSHQIIAKISSCYDL
                     LLGLFYHYGFFQDEKQINDILHKLFEAFKVKSDFSLDFQNKSPNAKFKEVKLYFEPHF
                     ATFYDYLEFEKYLYESEKGE"
     gene            1341..>1716
                     /locus_tag="ACJE1S_001903"
     CDS             1341..>1716
                     /locus_tag="ACJE1S_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraM"
                     /protein_id="HGG0807417.1"
                     /translation="MNKKELIEEIAKKHHIILDENDPILAVVSANEIIFDDFLKKIDL
                     LFTKHKTDLESYKFNILNEIREYSKNNQEALKDILIQAQTNQNTIKPSQEKTEDTKEK
                     KNTNINFWIIAIAGQIIFLLVGL"
BASE COUNT          678 a          174 c          228 g          636 t
ORIGIN      
        1 ggaatttgta aaatttattt tttctaattt agatttcata tgtggtaatt ttgcaaattt
       61 tgtaagcgaa gataatataa tattttttcc agttacaact cttttaatag tatttactat
      121 agctatttgt gctgtttggg gattatctaa tgttttatct ctctcattat ttataatgcc
      181 tatatttgtc gcagtttttt atatttttaa tattgatata agtttaaaaa acctttatag
      241 ctcttatttt atatttttaa tcattattaa tggtctttta tggagtgcaa atcaaagatg
      301 aaaaaaatta caatagtagc atacgcaata tgttttttat cgggcttatg gtttttattt
      361 agtactatta aagagtattt tggcatttta tcttttattc ttggaatcgc acttatttat
      421 tttggtgtta ttaatataaa aaaaatatca aataaagtcc ataaaaataa aacggagttt
      481 gaaactctac ttaatacaac aaatgatatt tttgcattgt ttggttctgt aatgctttta
      541 gtatttatca tcttttttac atttcaaaat gaaataaata ttaaattctt ttcagatcaa
      601 ggacttgtta tagaagatga taaaaaaata tctatttatt ttaaatctaa agaagttaaa
      661 acgcttgata gctctaaata taaggatata tcaacaatgt atagcgatga ttatgttaat
      721 gttattttca aaaataaaga tgataatagt agcttaattc taagatgtga tgaaagtggc
      781 tgtaaagagg agaaaaaatg agagaaaata tattaataaa aaaactttat gtagataacg
      841 acattataag agatttatat aaaaaaagct tggattttgc tattaatgaa agagaaaaag
      901 ccattgattt tttgtataaa aaaacaagta aaggaacata taatttatta tcagaaataa
      961 aaataacttt ggagtcttta gaaaactcca ttaatgaaaa tatgatttta tttggaaaat
     1021 ttgctttttt ctttaaaaat ccaaaatatt atacgcgaca aagccatcaa atcatcgcaa
     1081 agatatcttc ttgttatgat ttgctcttgg gtttatttta tcactatggt ttttttcaag
     1141 atgagaaaca aataaatgat attttacata aattgtttga agcctttaaa gtaaaaagcg
     1201 atttttctct tgattttcaa aataaaagtc caaacgctaa atttaaagaa gtcaaattgt
     1261 attttgaacc tcattttgct actttttatg attatttaga gtttgaaaaa tatttatatg
     1321 agagtgaaaa aggggagtag atgaataaaa aagaacttat tgaagaaatt gcaaaaaaac
     1381 accatataat cttagatgaa aacgatccta tattagcagt cgttagtgca aatgaaatca
     1441 tctttgatga ttttttaaaa aaaatagatc tgcttttcac aaaacacaaa acagatttag
     1501 aaagctataa atttaatata ttgaatgaaa taagagaata tagcaaaaac aatcaagaag
     1561 ctttaaaaga tattttaata caagcacaaa caaatcaaaa tacaattaaa ccatcacaag
     1621 aaaaaacaga agacactaaa gaaaagaaaa atacaaatat taatttttgg attatcgcta
     1681 ttgctggtca aattattttt cttcttgttg gtttaa
//
LOCUS       DBBXOW010000130         1714 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.131, whole genome shotgun sequence.
ACCESSION   DBBXOW010000130 DBBXOW010000000
VERSION     DBBXOW010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.131"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1236)
                     /locus_tag="ACJE1S_001904"
     CDS             complement(<1..1236)
                     /locus_tag="ACJE1S_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HGG0807418.1"
                     /translation="MYGKADNYDARTRDYFKGAVKANGLYVTPSYLDLTTNLPCFTYA
                     TPLYKEGKFIGVLAIDILVKDLQREFENLPGRTFVFDSENSVFVSTDKELLKPGYDVS
                     PVANIAKDKKDYEPFCYARPLDGTQRFGVCAKVLGEYTACVGEPIDYIEEPVFKIAYI
                     QIAIVIITSIISVLLLYFIVSRYLSPLAAIQTGLTSFFDFINHKTKNVSTIEIKSNDE
                     FGQISKTINENILATKQGLEQDAKAVKESVETVGVVESGNLTARITANPRNPQLIELK
                     NVLNRLLDVLQTKVGSDMNAIHKIFEEYKSLDFRNKLDNANGSVEVTTNALGDEIVKM
                     LKQSSDFANHLASESSKLQSAVQNLTSSSNSQAASLEETAAALEEITSSMQNVSVKTS
                     DVITQSEEIKNVTGIIGDIA"
     gene            complement(1237..1512)
                     /locus_tag="ACJE1S_001905"
     CDS             complement(1237..1512)
                     /locus_tag="ACJE1S_001905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HGG0807419.1"
                     /translation="MVKSESNYVRTAKNSMEAFKARNTAALESLAKNILKLPYEQISN
                     QEALMRYVGKDLKVFRDAGGFLAVYIAQPDGELVVTDPDSDEKGLNF"
BASE COUNT          590 a          298 c          227 g          599 t
ORIGIN      
        1 tgcaatatct ccaataatac ctgtaacatt cttaatctct tcagattgag tgataacatc
       61 actggtttta actgaaacat tttgcataga agaagtaatc tcttctaaag cagctgcggt
      121 ttcttctaaa gaagctgctt gagaattaga agatgaagta aggttttgaa ctgcactttg
      181 aagttttgaa ctttcactag ctaaatgatt agcaaagtca gaactttgtt ttaacatctt
      241 aacgatttca tctcctaaag cattagtagt aacttcaaca ctaccattag cattatcaag
      301 tttatttcta aagtctaaag acttatattc ttcaaagatc ttatgaatag cattcatatc
      361 tgatcctact ttagtttgta aaacatctaa aagtctattt agaacatttt taagttctat
      421 taattgtgga tttctaggat tagctgtaat tcttgcagta agattaccac tttctactac
      481 tcctacagtt tcaacacttt cttttactgc tttagcatct tgttctaaac cttgcttagt
      541 agcaagaatg ttttcattga tagttttaga gatttgacca aattcatcat tgctttttat
      601 ttctatagta gaaacatttt tagttttatg gttgataaaa tcaaagaatg aagttaaacc
      661 tgtttggata gctgcaagtg gggagagata gcgtgataca ataaaataaa gtaaaagaac
      721 gctaataata cttgtaataa ttactatagc aatttgtata taagcaattt taaacacagg
      781 ctcttctata taatcaatag gttctcctac acaagctgta tattctccta acaccttagc
      841 acatacacca aatctttgag ttccatcaag tggtcttgca taacagaaag gctcatagtc
      901 ttttttatct ttagcgatat tcgcaacagg gctaacatca taacctggtt ttaaaagctc
      961 tttatcagta gaaacgaaaa ctgaattttc gctatcaaac acaaaagttc ttcctggtaa
     1021 gttttcaaat tctctttgca gatcctttac caaaatatca attgctaaaa ctccgataaa
     1081 ttttccttct ttataaagcg gtgtagcata agtaaaacaa ggtaggttag tagttaaatc
     1141 aagataagaa ggagttacat acaagccatt tgcttttaca gctcctttaa aataatccct
     1201 tgttctagca tcataattgt ctgctttacc ataaattcag aaatttaaac ctttttcatc
     1261 agaatcagga tctgtaacaa caagttcacc atcaggctga gcaatataaa ctgctaaaaa
     1321 ccctccagca tctctaaaca cctttaaatc cttacctaca taacgcatta aagcttcttg
     1381 attgctgatt tgttcataag gaagttttaa aatattttta gccaagcttt caagagctgc
     1441 ggtatttctt gctttaaaag cctccataga atttttagca gttcttacat aattactttc
     1501 agacttaacc acttgattaa aaacctcatc cttaacaaag ataaatgtta taatccctaa
     1561 aaaaattaga cacacaattg ctatcaaatt tgcaataagt gagactttaa ttttgacact
     1621 tttcacagat tttacacctt tctttaaaaa attttaaaag agaatttttg atgttgtaat
     1681 tataaataag caaatttaaa cttaaattaa aaaa
//
LOCUS       DBBXOW010000131         1595 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.132, whole genome shotgun sequence.
ACCESSION   DBBXOW010000131 DBBXOW010000000
VERSION     DBBXOW010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.132"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..374
                     /locus_tag="ACJE1S_001906"
     CDS             <1..374
                     /locus_tag="ACJE1S_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807420.1"
                     /translation="MKEVRGGAFQSVGNCLSGTNSCLSLAVSQTITGTHYRDFKAILT
                     NEEPHSTNYHIGFVAQKNWSISSLGKPYSFLTYSAIIFDRASGTMYKQSSQVLNNNGI
                     VRELSYRYKNQFDRQLGGLSR"
     gene            424..1380
                     /locus_tag="ACJE1S_001907"
     CDS             424..1380
                     /locus_tag="ACJE1S_001907"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807421.1"
                     /translation="MINTAYINNHHKGGYSTQKLKDISQATTQSLGISKNYKIDATQM
                     QTLVKNLSQNKHFDTIDFTKTLENAYKVFSNLMQFSKNELPLGFEMDKNSFEILKIYD
                     KAQDLENNFLNENNSYKGSKVVINLKDLNSKDKSFMNFANVVFNQFGGGYLIEGQSNI
                     SGKLMGFDKNMDKNQIQDLNDFIKNNSFIANGSMEKLMEALDLFSSNLSIEEFKQKWL
                     NLTINLEPSNKTIEQIVREDLKAKEEQKPRTPIQSESQNKETYKDDSKMNELVKKLLE
                     NKFGKSEELELLFGVKFSDDDAGEFNKFLSSNSAPKSIDIKA"
     gene            complement(1410..>1595)
                     /locus_tag="ACJE1S_001908"
     CDS             complement(1410..>1595)
                     /locus_tag="ACJE1S_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002821140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807422.1"
                     /translation="ANSYSLYPNITNGKIIGFRVRKFKDINSLQKLKDNAEELFYLDK
                     QRVLKAKEAQSYKNLFI"
BASE COUNT          636 a          205 c          258 g          496 t
ORIGIN      
        1 agatgaaaga ggttagggga ggtgcgtttc aatctgtcgg taactgttta agtgggacaa
       61 attcttgctt aagtcttgcc gtaagtcaaa ctataacagg aactcattat agagatttta
      121 aagctattct tacaaacgaa gagcctcata gcacaaatta tcatataggg tttgtcgctc
      181 aaaaaaattg gtctatatct agtcttggaa aaccttatag ttttcttaca tactctgcca
      241 tcattttcga tagagcttct gggacaatgt ataaacaaag cagtcaagta ttaaataata
      301 atggaattgt tagggagctt agttatagat ataaaaatca atttgatagg caattaggcg
      361 gattatcaag gtaaaaacca taaagccgat ttaaattaag ataaatcagc aaggagtgag
      421 agtatgataa acacagctta tataaataac catcataaag gtggttattc tactcaaaaa
      481 ttaaaagata tatctcaagc aacaacgcaa agcttgggaa tttcaaaaaa ttataaaatt
      541 gatgcgacac aaatgcaaac actagttaaa aatctttctc aaaataaaca tttcgacact
      601 atcgatttta ccaaaacgct agaaaacgcc tataaagtgt tttctaattt aatgcaattt
      661 tctaaaaatg aacttccgct aggttttgaa atggataaaa atagttttga aattttaaaa
      721 atttatgaca aggcacaaga tttagaaaat aattttttaa atgaaaataa ttcttataaa
      781 ggaagcaaag tggtcataaa tttgaaagat ttaaactcaa aggataaatc ttttatgaat
      841 tttgcaaatg tagtttttaa tcaatttggt ggcggttatc ttattgaagg acaaagcaat
      901 ataagcggta agttaatggg atttgataaa aatatggata aaaatcaaat ccaagattta
      961 aatgacttta taaaaaataa ttcttttata gctaacggct caatggaaaa acttatggaa
     1021 gcactcgatt tgtttagtag caatttaagc atagaagaat ttaaacaaaa atggctaaat
     1081 ttaacaataa atttagagcc aagcaataaa accatagagc aaattgtaag agaagatctt
     1141 aaggctaaag aggagcaaaa acctcgcact cccatacaaa gcgaaagtca aaacaaagaa
     1201 acttacaaag atgatagtaa aatgaatgaa cttgtaaaaa aactgctaga aaataaattt
     1261 ggtaaaagtg aagaattgga acttcttttt ggtgtgaaat ttagtgatga tgatgcagga
     1321 gaatttaata aatttctttc ttcaaattct gcaccaaaaa gtatagatat taaggcttga
     1381 aacattaaaa actttgattt aaaatacaat caaataaaaa gatttttata actttgggct
     1441 tctttagcct ttaaaactct ttgtttatcc aagtagaaaa gctcttcggc attgtctttg
     1501 agtttttgca aggaatttat atccttaaat tttctaactc taaatcctat tatttttcca
     1561 tttgttatat taggataaag agaatacgag tttgc
//
LOCUS       DBBXOW010000132         1484 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.133, whole genome shotgun sequence.
ACCESSION   DBBXOW010000132 DBBXOW010000000
VERSION     DBBXOW010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.133"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(171..377)
                     /locus_tag="ACJE1S_001909"
     CDS             complement(171..377)
                     /locus_tag="ACJE1S_001909"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807423.1"
                     /translation="MDYNVFLLNIQDKINQEDFFNLKLKFEQLQNKKEALSNLVFLRL
                     QDPIKPLIMSMICGFFKFRLVGNR"
     gene            complement(427..780)
                     /locus_tag="ACJE1S_001910"
     CDS             complement(427..780)
                     /locus_tag="ACJE1S_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807424.1"
                     /translation="MKCFNAKFMFVGILAVFLSACSSGILKCSDQDVQNVLTEIILEH
                     NFGRFSEVDRKKLKFTYSGFMSDLTDKESKTQYCKAQVKANGSIDSRPYKWDAWIEYF
                     ARYTDDGMVYVEITR"
     gene            complement(1032..1453)
                     /locus_tag="ACJE1S_001911"
                     /pseudo
     CDS             complement(1032..1453)
                     /locus_tag="ACJE1S_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778403.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          562 a          290 c          130 g          502 t
ORIGIN      
        1 accaaataat gcccaataat agaaaaattc caaacaaccc gaaaaaaatt tcagaaatat
       61 ccgagttaga atcattttca tagctaattc ctagtatcaa aaataacaca caaggaaata
      121 aagataatat tatacgcaat attcctaatg catagtcttt tatcataaat ctatcgattg
      181 ccaaccaacc taaacttaaa aaaaccacat atcatactca taattagagg ttttatagga
      241 tcttgaagtc ttaaaaatac caaatttgat aaagcttctt ttttattttg taattgttca
      301 aacttaagct ttaaattgaa aaaatcttct tgatttattt tatcttgtat atttaaaaga
      361 aaaacattat aatccatatc cagtctcctt aaaattaact ttttaaggca tttttgcctt
      421 aaaaagttat ctagtaattt ctacatatac cataccatca tcagtatatc tagcaaaata
      481 ctcgatccaa gcatcccatt tgtaagggcg agaatcaata cttccatttg cttttacttg
      541 agctttacaa tactgtgttt tactttcctt atcggttaaa tcgctcataa aaccactata
      601 agtaaatttc aactttttac gatcaacctc agaaaatcta ccaaaattgt gttctaaaat
      661 aatctcagtt aaaacatttt gtacatcttg atcactacat tttagaatac cgctactaca
      721 agcactcaaa aatactgcca aaattccaac aaacataaat ttcgcattaa aacatttcat
      781 taatttcctc cttttttgtt cacctaaata atattttagt ttctattcat ctgtaccaag
      841 ttcaccattt tacttgtaat ctctaaaaaa acctgtgcaa tatttggagc aacagacaaa
      901 atatttaaaa gcaattttct ttattgctta agaattctaa atctcacttg ccacaaaaac
      961 aaaatttact aaaaacttaa taaaaatatt ttgcaaactt atttttgatt gtttttcata
     1021 aaaactcgaa attattgtat aatatttgca atcttttcaa aattttgttt tcttaatttt
     1081 ttacccacta aaaacatatc tacaatccac caaatccaat taacaagcca caacaaacca
     1141 tatattatcc ctaaagcact atatataatc attaaaatac cacaaaacat agctacaatt
     1201 gtaattccca agcgtataag ccctaaaccc aatctcctat cataaaacga cccactccaa
     1261 aagcaccaaa taaaaaagtc cctacccaaa atactaaagc gggacttttt agttttatca
     1321 ttggaagctg tgctactact tctttttgtt tatcctcatt taaacgatca aatttctctt
     1381 ttagcatcac ggtagatgtt gcatcttttg gcaatttatc gccaatgctg aaaagaaccg
     1441 aattgaaatc cataactact ccttgaaaat taaaaaatat ctcg
//
LOCUS       DBBXOW010000133         1427 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.134, whole genome shotgun sequence.
ACCESSION   DBBXOW010000133 DBBXOW010000000
VERSION     DBBXOW010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.134"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..1425)
                     /gene="dcuC"
                     /locus_tag="ACJE1S_001912"
     CDS             complement(<1..1425)
                     /gene="dcuC"
                     /locus_tag="ACJE1S_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HGG0807425.1"
                     /translation="MICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYITGTP
                     IPKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINASAKLA
                     FLANKPLGKIKNKYLILSGTFIVGMALKIVISSYAGLLLLLLACIYPVLISLKIRPIT
                     AVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVMVIAILIPFY
                     FAWVDKRDKEKGVLNDEVEIPPIIDPKCPTFYILFPWLPVVFLFIAYFFTIKLDVVTA
                     NFLSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGIKALG
                     GVNILANAVSNLGTGNFAWFGILLSITVLSFLVYFATVIMGSGIAAFNAFGKLAPDIA
                     TKLGVAPITFVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLLIAML
                     VNVLVAFYLAQTNPLPKEQNTTKIA"
BASE COUNT          537 a          252 c          230 g          408 t
ORIGIN      
        1 tgctattttt gtagtgtttt gttcttttgg caaaggattg gtttgtgcta gataaaaggc
       61 tacaagcaca tttacaagca tagcgataag taaaagagga gtggttcgtt ttataatatc
      121 cattggagct acttttgcaa atccagctaa agctatgatt ccgcctgcta ttggtgaagc
      181 tgcacgacct aaacaagatg caatttctat aggtaaaaca aaagtgatag gggcaacgcc
      241 taattttgta gctatatcag gagctaattt cccaaaagca ttaaaagcag caatcccact
      301 tcccataatc actgtagcaa aataaactaa aaagcttaaa acagtgatgc ttaaaagtat
      361 gccaaaccat gcaaaatttc ctgttccaag atttgaaacc gcgttagcaa ggatattaac
      421 tccaccaagt gctttaatgc cttcagcaaa tactccagcg gcgatgatta tgcttacgac
      481 tgagataaaa atttcagcca tagcttttaa aatcaccatc atatcttcgc ctaattttct
      541 agcatttctg tgtcttgcaa attcaacaag aaaaactaaa gaaatgctta aaaaatttgc
      601 tgttacaaca tcaagcttga tagtaaaaaa atatgctata aataaaaata cgacaggcag
      661 ccaaggaaag agtatataaa aagtaggaca tttaggatca atgattggtg gaatttcaac
      721 ttcatcattt aaaacacctt tttctttatc tcttttatca acccaagcaa agtaaaaagg
      781 tattaagata gcaataacca tcacataagc aatcacgcta taaatttgat aatttaaaaa
      841 aagccccacg acattatcgc tttgtcctac catatctgcc atattgattg aatttccatc
      901 ttttggacca taatcaagcg caatcaaaga aagcacacat acagctgtaa taggacggat
      961 tttaagtgag attaaaacag gataaataca tgctaataaa agcaaaagaa gtccagcata
     1021 gctagaaata acaattttta aggccattcc aacgataaaa gttccgctta aaatcaaata
     1081 tttatttttg atttttccta aaggtttgtt tgctaaaaaa gcgagtttag ccgaagcatt
     1141 gatatgtttc atataagcag caaaacctgc cacactcatg ataataagtc ctactccaga
     1201 aagctgactt ttaaaagtcg ctgtgataaa agcatagcta tcaagtaaaa cattcaaaaa
     1261 gcttgcatgt tctctgctcg gggcttttgg tataggtgtt cctgtgatgt aaaaagcaaa
     1321 aataagcaag ataatacctg aaagaaaaaa tacaaaaata ggattgtatt ttttaagtat
     1381 ataataagca acgacaatta ccgctaaaag tgtagaacat atcataa
//
LOCUS       DBBXOW010000134         1393 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.135, whole genome shotgun sequence.
ACCESSION   DBBXOW010000134 DBBXOW010000000
VERSION     DBBXOW010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.135"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            14..1135
                     /locus_tag="ACJE1S_001913"
     CDS             14..1135
                     /locus_tag="ACJE1S_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HGG0807426.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDTEETPSAKEIFLNGVASDLNINEFIDDEIKEENL
                     QLFFNPNKDKLDKLNPIYLSYFVKWNSYSNYIFAKSRGFTDLEGEWDRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLDNKCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ"
     gene            1153..>1393
                     /locus_tag="ACJE1S_001914"
     CDS             1153..>1393
                     /locus_tag="ACJE1S_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HGG0807427.1"
                     /translation="MQNSLEAYTMKYNENGYGLLFPDGHVVRFYERILKYKLNKINGN
                     LLDFGCGNGVHSAYFQSKGFKTFGIDIVPSLKEIWK"
BASE COUNT          539 a          161 c          249 g          444 t
ORIGIN      
        1 gaagggatgg ggaatgattt attgtgatca ctgcgtgatg ccaaatacta gacctggtat
       61 taattttaca aaagataaag aaggtaaaaa tatctgttca gcttgcatca atcataaaaa
      121 taaagaaaat attgattata aagcaagatt taaagagctt gaagccttat gcgataaata
      181 ccgcagaatg aatggaaaat ttgaatatga ttgcgctatt gccgtaagtg gaggtaaaga
      241 ttcgcatttt caagtgcata tcatgaaaga aaaacttgga atgaatccta ttctttttag
      301 cgttgaagat aatttcacca tgactgaagc aggtaagaaa aatcttaaaa atttaagtga
      361 aacttttggt tgtcatatta ttagcttaaa gcctgatatc aaaactcaaa aaaaagttat
      421 gctaaaaacc tttgaaaaat atggaaaacc cacttggttt attgatagac tgatttacag
      481 ctatcctttt gctatggctt taaaatttaa tacaccttta ttggtttatg gagaaaatgt
      541 tagttatgaa tatggaggta gtgataccga agaaactcct agcgctaaag aaatattttt
      601 aaatggtgta gctagtgatt taaatataaa tgaatttata gatgatgaaa tcaaagaaga
      661 aaatttgcaa ctctttttca atccaaacaa agataaactc gataaactta accctatcta
      721 tctaagttat tttgtaaaat ggaattctta tagcaattat atttttgcta aaagtcgtgg
      781 ttttactgat ctagaaggcg aatgggatag aacaatgtgt gcagaaaatt ttgatcaagt
      841 tgatagtata ggctatatcc tacacgcttg gatgaaatac cctaaatttg gtcatgcttg
      901 tgcgagtgat tacgcagctc gtttcgtgcg ttatggactt ttaagcagaa aagaagctat
      961 tgaacttgtg caaaaaagag atcataagct tgacaataaa tgcgttgaag atttttgcaa
     1021 tttcataggt attagtaaaa ctacattttg gaaaatagta gaaaaacatt acaatatgga
     1081 tttattttat aaaaatgatt ttggagaatt taaattaaaa aacaaattac aataaaaata
     1141 taaaggaaaa aaatgcaaaa ctcattagaa gcttatacaa tgaaatataa tgaaaatgga
     1201 tacggattac tttttccaga tggtcatgta gtacgttttt atgaaagaat tttaaaatac
     1261 aaactaaata aaataaatgg aaatttactt gattttggtt gtggcaatgg tgtacattca
     1321 gcgtattttc aaagcaaagg gtttaaaact tttggaatag atatagttcc aagtttaaaa
     1381 gaaatttgga agc
//
LOCUS       DBBXOW010000135         1350 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.136, whole genome shotgun sequence.
ACCESSION   DBBXOW010000135 DBBXOW010000000
VERSION     DBBXOW010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.136"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(27..341)
                     /locus_tag="ACJE1S_001915"
     CDS             complement(27..341)
                     /locus_tag="ACJE1S_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002815121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore coat protein CotS"
                     /protein_id="HGG0807428.1"
                     /translation="MRSSLEKVIKNYSENFSNKRDNDFTQGLIKYLYENDIIGENDKI
                     FLEKNFQYIRVINEKEKRLINVYFCEKPIIDFFQNAEYEKELQYYGINEKDFISLQRS
                     KK"
     gene            complement(541..1293)
                     /locus_tag="ACJE1S_001916"
     CDS             complement(541..1293)
                     /locus_tag="ACJE1S_001916"
                     /inference="COORDINATES: protein motif:HMM:NF021182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YopX family protein"
                     /protein_id="HGG0807429.1"
                     /translation="MKLKDFDFRIWDKDEKCFLDPYTKSRAVVKNLPNEKLLNLEIEL
                     FTGLCDKNGNKIYEGDILYSFEDCSEDEAFKYKVVFKEEAFYLVECGDNGEEYDEDLI
                     SEFRLTELEIMGNIHENAELLKVKDDEAEENDIFFKGNMIVWLFGNYYSVYEVVKAYE
                     ESYIISDLMGRQIEIDPRVAMNGGYKDAKDDLFLWYFEVMENEEIKIYPKKLTYNQML
                     EECKKNDIYIIKPLYSLGYTYNNNREDFKNYN"
BASE COUNT          417 a          236 c          128 g          569 t
ORIGIN      
        1 aagaaaaaat aaaagcgtta ctgaaatcat tttttactcc tttgaaggct tatgaaatct
       61 ttttcattta ttccataata ttgcaattct ttttcatatt ctgcattttg aaaaaaatca
      121 attattggtt tttcgcaaaa atacacatta atcaatcttt tttctttttc attgattact
      181 ctaatatatt gaaaattttt ttctaaaaaa attttatcat tttctcctat gatatcattt
      241 tcataaagat actttattaa accctgtgta aaatcattat ctcttttatt tgaaaaattt
      301 tcactatagt tttttatcac tttttctaag ctagaacgca taaaaaacct ttctattttt
      361 tctcgagcaa ttaggacatt tgaaaataaa tttttcattc ggctgaaact caacataaat
      421 cttttctccg cattttttgc actcgatttc tgtgcataaa atcatagaat gatttttgat
      481 tttatcattg agcaaatatg aatacatagt atttttcaaa cttattcctt ttgacttatt
      541 ttagttgtag ttcttaaaat cttccctatt attattgtag gtatatccca aagagtataa
      601 tggctttata atgtatatat cgtttttctt acactcttct agcatttgat tataagttaa
      661 tttttttgga tatattttaa tttcttcatt ttccattact tcgaaatacc ataaaaataa
      721 atcatctttg gcatctttat agccaccatt cattgccacg cgaggatcga tttctatttg
      781 tcttcccatt aaatccgata taatatatga ttcttcatat gctttcacta cttcgtaaac
      841 agaatagtaa tttccaaata accatactat catatttccc ttgaaaaata tgtcattctc
      901 ttcggcttca tcatccttga ctttcaataa ctccgcgttt tcgtggatat tgcccataat
      961 ttctagttct gttaaccgaa attcacttat taaatcttca tcgtattctt cgccattatc
     1021 accgcattca accaaataga aggcttcttc cttgaaaaca actttgtatt taaaagcttc
     1081 atcttcagag caatcttcaa aagaatacag tatatcaccc tcataaatct tatttccgtt
     1141 tttatcgcaa agccctgtaa aaagttctat ttctaaattt aataattttt catttggtaa
     1201 attttttaca actgctctgc tttttgtgta aggatctaaa aagcattttt catctttgtc
     1261 ccaaatccta aaatcaaaat cttttagttt cattgttttt ccttattagt ttcattaaca
     1321 attgcttttt tatctttaaa gagtatatac
//
LOCUS       DBBXOW010000136         1349 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.137, whole genome shotgun sequence.
ACCESSION   DBBXOW010000136 DBBXOW010000000
VERSION     DBBXOW010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.137"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..242
                     /locus_tag="ACJE1S_001917"
     CDS             <1..242
                     /locus_tag="ACJE1S_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807430.1"
                     /translation="QKQYPEVHSLEESLAILKKYKDDLTKEQYEGIKSVICGHAIEDM
                     FANEKDVIDMIKIAKDEANADEIIAEYKREWGVND"
     gene            235..918
                     /locus_tag="ACJE1S_001918"
     CDS             235..918
                     /locus_tag="ACJE1S_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family protein"
                     /protein_id="HGG0807431.1"
                     /translation="MIDKVLKFLDDGIPKNDFDRQLLASNLVGATNLIELNKREREIT
                     LKKQLKLQLNPIKGNFDYQHLKDIHKALFEDVYTWAGQDRMQMGLKEKFAKYAPNGAI
                     INFVPGKELDKYSKIIFDELAKNNYLKNSKDLNHFAKNLAKFMGEINALHPFREGNGR
                     TQRIFLNELAKNAGYKLDLNLISKHKMIHACAEASQLKPGRLEALIKDNLKNFRQNLD
                     LEQNKGISL"
     gene            923..>1349
                     /gene="lepB"
                     /locus_tag="ACJE1S_001919"
     CDS             923..>1349
                     /gene="lepB"
                     /locus_tag="ACJE1S_001919"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HGG0807432.1"
                     /translation="MRKTIAIFAFSFVFLLILSYLIFYFGGFHFNHTRSMPLGLYKEI
                     SSSIFNKNDIVLLKIPQKKEILLKKIVAINGDFVEVNRQGVFINKTLMPDSKIFSFDS
                     EGNPLEFKPFKCKLKENELFVMGENIKSYDSRYFGVINIF"
BASE COUNT          549 a          162 c          212 g          426 t
ORIGIN      
        1 tgcaaaaaca atatccagaa gtgcatagct tagaagaaag ccttgcgata cttaaaaaat
       61 ataaagatga tttgactaaa gagcaatacg aaggtattaa atctgttatt tgcggacacg
      121 ctattgaaga tatgtttgca aatgaaaaag atgttatcga tatgataaaa attgcaaaag
      181 atgaagcaaa tgccgatgaa ataatcgccg aatataaaag agaatgggga gtaaatgatt
      241 gataaagttt tgaaattttt agatgatggt attcctaaaa atgattttga cagacaactt
      301 ttagcttcta atttagtagg tgcaacaaat ttaatagagt taaataaacg agaaagagaa
      361 attacattaa aaaaacaatt aaaactacaa ctcaatccca ttaaaggcaa tttcgattat
      421 cagcatttaa aagatataca taaagcactt tttgaagatg tttatacttg ggcaggacaa
      481 gatagaatgc aaatgggact aaaagaaaaa tttgcaaaat atgcacccaa tggagcaatt
      541 attaattttg ttcctggaaa agagttagat aaatactcta aaataatttt tgatgaactt
      601 gcaaaaaata actatctaaa aaactccaaa gatctaaatc attttgcaaa aaatttagca
      661 aaatttatgg gcgaaatcaa tgctttacac ccttttagag aaggtaacgg cagaactcaa
      721 agaatatttt taaatgagtt ggctaaaaat gcaggttata aacttgattt aaatttaatt
      781 tctaagcata aaatgataca tgcttgtgca gaagcttcac aattaaaacc tggaagattg
      841 gaggctttaa ttaaagacaa tctaaaaaac tttagacaaa atttagattt ggagcaaaat
      901 aaaggaatat cattataatg ctatgagaaa aactattgca atatttgcct tttcctttgt
      961 atttcttcta atcctctcat atcttatttt ttattttggt ggctttcatt ttaaccatac
     1021 aagatcaatg cctttgggct tatataaaga aattagctct tccattttta acaaaaacga
     1081 tattgtgctt ttaaaaatac cacaaaagaa agaaatttta ttaaaaaaga ttgttgcaat
     1141 aaatggagat tttgtagaag ttaatagaca aggtgtgttt attaataaaa cacttatgcc
     1201 tgattctaaa attttttcat ttgatagcga aggtaatcca ctagaattta aaccttttaa
     1261 atgcaagtta aaagaaaatg aactttttgt tatgggtgaa aatataaaaa gttatgatag
     1321 tagatacttt ggagtgataa atatattcc
//
LOCUS       DBBXOW010000137         1314 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.138, whole genome shotgun sequence.
ACCESSION   DBBXOW010000137 DBBXOW010000000
VERSION     DBBXOW010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.138"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            11..949
                     /locus_tag="ACJE1S_001920"
     CDS             11..949
                     /locus_tag="ACJE1S_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG0807433.1"
                     /translation="MKLKNTTISEDLERWIEAYLKHIQALSYSNNTFLLYRRILLEFV
                     EYSLDYQDEMQINDIKTTFLVNFLNYLENNSKNGNKLSKKTKITYLRVLTSFFSFISD
                     NNDDLFVFSFDMKKIRFRTEKSEEKLNYLNENEIIRLNNVLEKEKAKKEVYNSFRNSL
                     LIKLMLYGGLRISEALNVKLCDFEEVDDEILKISIIGKGGKEQFAFIKKEEVDDELEY
                     FKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRHTLAMRLTAKG
                     TNLVVIQKILRHANLNTTTIYAKATNDTVKAALLNN"
     gene            complement(992..>1314)
                     /locus_tag="ACJE1S_001921"
     CDS             complement(992..>1314)
                     /locus_tag="ACJE1S_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807434.1"
                     /translation="ENKENREKLIKTLIIHLNSYLEAENNLQKIKILVKIYQNLQKCS
                     RTPDLIDIEELEFNKEDIFEELFYALGGLGGMYSVEMIQSRIANFIKILGGEPKLLLE
                     RFTA"
BASE COUNT          515 a          150 c          181 g          468 t
ORIGIN      
        1 tataaataaa atgaaactta aaaatactac aataagcgaa gatttagagc gttggataga
       61 agcttatttg aaacatattc aagcattatc ctattcaaat aatacttttt tactttatag
      121 gcgtatttta ctagaatttg tagaatattc tttagattat caagatgaaa tgcaaataaa
      181 cgatataaaa acgacttttt tagtcaattt tcttaattat ttagaaaata attcaaaaaa
      241 tggcaataaa ctatcaaaaa aaacaaaaat aacttatttg agagtattaa ctagcttttt
      301 ttcttttata agcgataata atgatgattt gtttgttttt tcctttgata tgaagaaaat
      361 tagatttaga acagaaaaat cagaagaaaa attaaattat cttaatgaaa atgaaattat
      421 aaggctaaat aatgttttag agaaagaaaa agcaaaaaaa gaagtttata atagttttag
      481 aaactcttta ctgataaaac ttatgcttta tggaggactt agaatttctg aagctttaaa
      541 tgtaaaactt tgtgattttg aagaggttga tgatgaaata ttaaaaatat ccataatagg
      601 caagggcggt aaagaacaat ttgcatttat taaaaaagaa gaagtagatg atgagcttga
      661 atattttaaa gaaaatatcc aagatagtga ttacataatg caaactagca caggaaaaca
      721 tttaaataga agtaatgctt ttttgattgt aaataatatt tacgctaaag ctttgatcag
      781 caaaaaagga cttcatttgc ttagacacac tttagccatg agattaacag ctaaaggaac
      841 aaatcttgtg gtcatacaaa aaattctaag acatgcaaat ctaaatacta ctactatata
      901 tgccaaagca acaaatgata cagtaaaagc tgcgttattg aataattaat ttttctaaaa
      961 ttgattattt acatagactt ctttttgaag tctatgctgt gaatctttct aataaaagtt
     1021 taggttctcc gccaagtatt ttgatgaaat ttgcaattct tgattgtatc atttctacgg
     1081 aatacatacc tcctaaaccg cctaaagcat aaaataattc ttcgaaaatg tcttctttgt
     1141 taaattcaag ttcttctata tcaataagat caggagttcg gctacatttt tgtaaatttt
     1201 gatatatctt gactaaaatc ttgatttttt gtagattatt ttcagcctct aaataagaat
     1261 ttaagtgtat tattagagtt tttatgagtt tttctctatt ttctttattt tcaa
//
LOCUS       DBBXOW010000138         1266 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.139, whole genome shotgun sequence.
ACCESSION   DBBXOW010000138 DBBXOW010000000
VERSION     DBBXOW010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.139"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..467
                     /locus_tag="ACJE1S_001922"
     CDS             <1..467
                     /locus_tag="ACJE1S_001922"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0807435.1"
                     /translation="TNESIDIILNGFKDKNFSNYFLPSNISTGLNFATKIIIIGLSLK
                     KGDIFIIENPEIHLHPKAISKFADFFAFLVSKGIQVIIETHSNYLLSKLRYINFKKEF
                     KDEDCIIYYKDQQTDFVPIFIHSGKFTNINREKINFPTGFFDTDLDKLMEIR"
     gene            464..1171
                     /locus_tag="ACJE1S_001923"
     CDS             464..1171
                     /locus_tag="ACJE1S_001923"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807436.1"
                     /translation="MKFSLVLDDEVLIEFEKFKNSLECDKNIIENLFKYYKPTHLINL
                     KQIQKLEESNLVIDSDIKSAFLQSGYANLTLEKLSQKTTLKIILTNDKNKSFPYLYIK
                     DEKIENNLCATFKQKESREKAFEYFKNLFLEANSIFIYDQYLTQENLNDFIEICSINK
                     NIYLPKYIYSRINPHNEMIKIDKQNNRYLGCHDRYILIYYPTYKIELILTSGIDYLLD
                     TEKDFTYIVRVITSSTS"
BASE COUNT          542 a          158 c          137 g          429 t
ORIGIN      
        1 cgacaaatga aagtatagac attatactca atggatttaa agataaaaat ttttctaatt
       61 atttcctgcc atctaatata tccactggct taaattttgc tactaagatt attattattg
      121 ggttatcttt aaaaaaagga gatatattta taatagaaaa cccagaaatt catttgcatc
      181 caaaagctat ctctaaattt gcagatttct ttgcattttt ggtttcaaaa ggaattcaag
      241 ttatcatcga aactcattct aattatcttt tgagtaaatt aagatatata aatttcaaaa
      301 aagaatttaa agatgaagat tgtattattt actataaaga tcaacaaaca gattttgtac
      361 caatttttat tcattctgga aaatttacca acataaatag agaaaaaatt aattttccta
      421 caggattttt tgacacagat ttggataaat taatggaaat aagatgaaat tttcacttgt
      481 gcttgatgat gaagtattaa tagaatttga aaaattcaaa aattctcttg aatgcgacaa
      541 aaatatcatc gaaaatttat tcaaatacta taaaccaaca catttaatca atttaaagca
      601 aattcaaaaa ttagaagaat caaatctagt tatagacagt gatataaaaa gtgcttttct
      661 ccaaagtgga tatgctaatc taaccttaga aaaactctca caaaaaacta ctctaaaaat
      721 cattttaaca aatgacaaaa acaaatcttt tccatatctt tatataaaag atgaaaaaat
      781 agaaaacaat ttatgtgcaa catttaaaca aaaggaatct agagagaaag cttttgaata
      841 ttttaaaaat ttgtttttag aagctaatag tatttttata tatgatcagt atttaacaca
      901 agaaaattta aacgatttta tagagatatg tagtattaat aaaaatattt atttgcctaa
      961 atatatttac agtagaataa atcctcataa cgaaatgata aaaatagaca aacaaaataa
     1021 ccgctacttg ggttgtcacg ataggtatat tttaatatat tatccaacct ataaaataga
     1081 actgatatta actagtggga tagattattt attagataca gaaaaagatt tcacttatat
     1141 tgttagagta atcacatctt ctacctctta gtaaaatact ttaattatat tattcactaa
     1201 ccaactcaaa caaaccaatg aatataacct aactgattaa attaaataaa ttaataaact
     1261 aatcaa
//
LOCUS       DBBXOW010000139         1234 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.140, whole genome shotgun sequence.
ACCESSION   DBBXOW010000139 DBBXOW010000000
VERSION     DBBXOW010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.140"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            96..704
                     /locus_tag="ACJE1S_001924"
     CDS             96..704
                     /locus_tag="ACJE1S_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6037 family protein"
                     /protein_id="HGG0807437.1"
                     /translation="MKMTGLENLYKDIKNKQMTYCIFNYTHNRIELEIMFDINPKPFK
                     LLIIKKYSNKTLLLDILNGFKLDIFLSKEKYQILLDILDILDIKGGGATPFSTKKFFE
                     ELNSAIPSAIVQYDLNSNLRHIISQIKNFEDADLIYVKHLIDWNKINSGKHVSQKNRD
                     KTEYLYPDIFKIIKDKNISVVYTNNKDSSKYTNIEDIEIING"
     gene            709..>1234
                     /locus_tag="ACJE1S_001925"
     CDS             709..>1234
                     /locus_tag="ACJE1S_001925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807438.1"
                     /translation="MNNILTYKIDTEQPIDIKELAESLIAIQNMYRKSIISNEASIKI
                     SEVRKGSYEFDIVVLGLGLTLPYIENFNSAIDFIKNLKNCYSFFKDNKFDNNTNQINI
                     DDAKNTSKIIQPIISIGNNSTVIIQNGYSDSECFSVISKEAAEVQKKFIVILKIKKEK
                     LKKNCKHINIFKIYL"
BASE COUNT          537 a          101 c          180 g          416 t
ORIGIN      
        1 gtaataatta taagaatgta ttaggttatt tagaatttta aataaaatct tagttgatta
       61 aaaaagtagt tatttgaatt aaaaaaggag aagcaatgaa aatgacagga ttggaaaact
      121 tatacaaaga tataaaaaat aagcagatga cttattgtat atttaattat acacacaata
      181 gaattgaatt ggaaataatg tttgatataa acccaaaacc atttaaattg cttataatta
      241 aaaagtattc taataaaact ttgttgctag atattttaaa tggctttaag ctagatatat
      301 ttctttcaaa agaaaaatat cagatattat tagatatatt agatatatta gatataaaag
      361 gtggtggcgc gactcctttt agcacaaaga aattttttga agaattaaat agcgcaattc
      421 catctgcaat tgtgcaatat gatttaaata gtaatttaag acatatcatt tctcaaataa
      481 aaaattttga ggatgctgat ttgatatatg ttaaacactt gatagattgg aataagatta
      541 atagcggtaa gcatgtgtcg caaaaaaata gggataagac ggagtattta tatcctgata
      601 tttttaaaat tataaaagat aaaaatataa gcgttgttta tacaaataat aaagattctt
      661 ccaaatatac taatatagaa gatattgaaa taataaatgg atagcgatat gaataatata
      721 ttaacctata aaatagatac cgagcaacct atcgatataa aagagttagc tgaaagttta
      781 atagctatac aaaatatgta taggaaaagt attattagca atgaggcttc tataaagatt
      841 agtgaagtta gaaaaggtag ttatgaattt gatattgttg ttttgggttt aggattaact
      901 ttaccttata tagaaaattt taattcagcg attgatttta ttaaaaattt aaaaaattgt
      961 tatagttttt ttaaggataa taaatttgat aataatacta atcaaattaa tattgatgat
     1021 gcaaaaaata ccagtaaaat aatacaacca attataagca taggcaataa ttctacagtt
     1081 attattcaaa atggttatag tgattctgaa tgttttagtg ttataagtaa agaagcagca
     1141 gaagtccaaa aaaaatttat agttatattg aaaataaaga aagaaaaact aaagaagaat
     1201 tgcaaacata taaatatttt caaaatatac ttgt
//
LOCUS       DBBXOW010000140         1153 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.141, whole genome shotgun sequence.
ACCESSION   DBBXOW010000140 DBBXOW010000000
VERSION     DBBXOW010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.141"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            90..1084
                     /locus_tag="ACJE1S_001926"
                     /pseudo
     CDS             90..1084
                     /locus_tag="ACJE1S_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343501.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004067 - asparaginase activity [Evidence
                     IEA];
                     GO_process: GO:0006528 - asparagine metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
BASE COUNT          386 a          166 c          244 g          357 t
ORIGIN      
        1 catcaatgaa acttaatttt aataaataag ggggctttgt gaaaaagtta cttttgtgtg
       61 tatgggtatt tttatctata ggagtatgta tggcagaagc caaaccaaaa attgctattt
      121 tggcaacggg cggaactata gcaggttcta ttgatagtgc tgtggctact acaggctata
      181 cagcaggtgt tgtgggtgta gatgttttaa tcaaagcagt gccacaaatt caagatttgg
      241 ctaatatcag cggggaacaa gtagcaaata ttgacagctc taatatgcgt gatgaaattt
      301 ggttaaagct tgctaaaaaa atcaataagc tttttgatga gggtgtagat ggtgtagtca
      361 ttactcacgg tactgatacc atggaagaaa ccgcttattt tttaaatttg accattaaaa
      421 gtgataagcc tgtagtttta ttggtgctat gcgtccatca actgctataa gtgccgatgg
      481 cccaaaaaat ctttacaatg ctgtagcatt agctgccgat aaagaagcta aaaataaagg
      541 cgttatggtg gctatgaatg ataaaatttt aagtgctagg ggcgtggtaa aaacccatag
      601 tttaaatgtt gatgcttttt cttctcctga ttttggagat ttgggctata tagtagatgg
      661 aaaagttttc ttctataata acataagcaa agcacacaca aaaaatagcc cttttgatgt
      721 aagtaaactc acaagcttgc caaaggtaga tatactttat acttactcaa atgatggtag
      781 cgctattgct gcaaaagctt tatttgacaa tggaaccaaa ggtattgttg tagcaggaag
      841 tggcgcagga agcatacatg aagatcaaaa aaatacttta aaagaactca tcaaacaagg
      901 gcttgatgtt gttgtaagtt caagggttgc agcaggacgc gttgcggtga gtgatgcgga
      961 taagaaattg ggttttatca gtgctgaaga tttaaatcca caaaaagcta gagttctttt
     1021 gatgctagct cttacaaaaa caaatgatcc taaaaaaatc caagaatact ttttaaaata
     1081 ctgaatttag gcatttctaa aagtttagag aggatattta tcttctctaa attcagtatt
     1141 ttcatccttt taa
//
LOCUS       DBBXOW010000141         1072 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.142, whole genome shotgun sequence.
ACCESSION   DBBXOW010000141 DBBXOW010000000
VERSION     DBBXOW010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.142"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            35..1066
                     /gene="pseI"
                     /locus_tag="ACJE1S_001927"
     CDS             35..1066
                     /gene="pseI"
                     /locus_tag="ACJE1S_001927"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HGG0807439.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKKAGADAI
                     KIQTYTPDSLTLNSDKEDFIIKGGLWDKRKLYELYESAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFMRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIVSLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKNIESEDSKFSLDFDEFKAMVDAVRQTESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEIFSEENVKSVRPSFGLHPKFYQELLGKKATKDIKFG
                     DALKQGDFQ"
BASE COUNT          407 a          159 c          198 g          308 t
ORIGIN      
        1 ttttagtcag gaaatttacc aaagaaagaa aaacatgcaa ataggaaatt ttaacaccga
       61 taaaaaagtt tttatcatag cagaacttag tgcaaatcac gcaggaagtc ttgagatggc
      121 acttcaaagc ataaaagcag ccaaaaaagc aggtgctgat gcgataaaaa tccaaaccta
      181 cactccagat agcctcacgc taaatagcga caaagaagat tttatcatca aaggaggact
      241 ttgggacaaa agaaaacttt atgagcttta tgaaagtgca aaaacccctt atgaatggca
      301 ttctcaaatc tttgaaaccg cacaaaatga aggcatactt tgtttttcaa gtccctttgc
      361 taaagaagat ttggaatttc taaaacgctt tgatcctata gcctataaaa tcgcttcttt
      421 tgaagctaat gatgaaaatt tcatgcgttt aatcgccaaa gaaaaaaaac ctactatcgt
      481 ttcaacgggc attgctacag aagaagaact ttttaaaatc tgtgaaattt ttaaagaaga
      541 aaaaaatcct gatttaatct ttttaaaatg cacttcggct tatcctactg ccatagaaga
      601 tatgaattta aaaggcatag taagtttaaa agaaaaattt aatgttgaag ttggactaag
      661 cgatcacagc tttggttttt tagctcctgt tatggcagta gcacttggag ctagagtgat
      721 agaaaagcat tttatgttag ataaaaatat agaaagtgaa gacagtaaat ttagtcttga
      781 ttttgatgaa tttaaagcta tggtagatgc ggttagacag accgaaagtg ctttaggcga
      841 tggtaagtta gatttagatg aaaaggcgct taaaaaccgt gtttttgcaa gaagtttata
      901 tgcaagtaag gatatcaaaa aaggtgaaat tttcagcgaa gaaaatgtaa aatcagtgcg
      961 tccttctttt ggactacatc ctaaatttta tcaagagctt ttaggaaaaa aagctactaa
     1021 agatataaaa tttggcgatg ctttaaaaca aggagatttc caatgacctt ca
//
LOCUS       DBBXOW010000142         1058 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.143, whole genome shotgun sequence.
ACCESSION   DBBXOW010000142 DBBXOW010000000
VERSION     DBBXOW010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.143"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            34..720
                     /locus_tag="ACJE1S_001928"
     CDS             34..720
                     /locus_tag="ACJE1S_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG0807440.1"
                     /translation="MIISVVNEKGGSGKTTLAVNLSARLAEDGDNVLLIDADPQKSTE
                     VFSDMRSQSNLEPLFSNVSKTGVSLGDEIKRMKNAFDSIIVDTGGRDSKEMRKAILSS
                     NIIIIPTIPSQYDVNVLDHMLEIYNEVIDINPNLLALVLVNRVSPNPFLAKELENLKE
                     YINEAKKEKGLDRVIMLESVIYERQAYRKAVIEGKSMKEFCDKNDKALNDFENFYQEL
                     LKITNEKLGV"
     gene            723..947
                     /locus_tag="ACJE1S_001929"
     CDS             723..947
                     /locus_tag="ACJE1S_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807441.1"
                     /translation="MGFKKLSSETPKNENDFVNSARGETGNAKTSNAKRNKKLVVNFT
                     EEEYQTLNQEANSIGLSLNSYVRFKIFRKE"
BASE COUNT          442 a          124 c          173 g          319 t
ORIGIN      
        1 tatttcaata taaattaaaa acaaggtttt attatgatta tatccgtagt aaatgaaaaa
       61 ggtggaagcg gtaaaactac attagcagta aatctttccg caagattggc tgaagatggc
      121 gataatgttt tacttatcga cgcagatccg caaaaatcga ctgaagtttt ttcagacatg
      181 agaagtcaat caaacttaga acctttattt tcaaatgttt caaaaacagg tgttagttta
      241 ggcgatgaaa ttaaaagaat gaaaaatgct tttgatagca ttatagttga tacaggcggt
      301 agggatagta aagaaatgcg aaaagctata ctttcatcaa atataattat tattcctaca
      361 attccaagtc aatacgatgt taatgttcta gatcatatgc tagaaattta taatgaagtg
      421 attgatatta atcctaattt attagctttg gttttagtca atagggtttc acccaatcct
      481 tttttagcaa aagaattaga aaatttaaaa gaatacatta acgaagctaa aaaagaaaaa
      541 ggattagata gagtaataat gcttgaaagc gtaatctatg aaagacaagc ttatcgcaaa
      601 gcagtaatag aaggtaaaag catgaaagaa ttttgcgata aaaacgacaa agctttaaat
      661 gactttgaaa acttttacca agaactttta aaaataacaa atgaaaaatt aggagtataa
      721 taatgggatt taaaaaactg agttcagaaa caccaaaaaa tgaaaatgac tttgttaatt
      781 cagctcgagg agaaacagga aatgcaaaaa ctagcaatgc aaaaagaaat aaaaagcttg
      841 tagtaaattt tacagaagaa gagtatcaaa ccttaaatca agaggctaat tcaataggtt
      901 tgagcttaaa ttcttatgta agatttaaaa tttttagaaa ggagtaaaaa aatgttttta
      961 gattttatag gcaacatact tatatttata tttatacact taatgattat atttatagca
     1021 aaatctcaca tcgctgtaat caaaacaggt tttcaaag
//
LOCUS       DBBXOW010000143         1015 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.144, whole genome shotgun sequence.
ACCESSION   DBBXOW010000143 DBBXOW010000000
VERSION     DBBXOW010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.144"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..892
                     /locus_tag="ACJE1S_001930"
     CDS             <1..892
                     /locus_tag="ACJE1S_001930"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HGG0807442.1"
                     /translation="VLYINLRGVKIALYIQNIFTIIIFISILFCVIGMMLSEFSWKNL
                     ATYISNQDISLQNILRVVAIAPWLYVGFDCAVQVIQDTKNKNSWFFNQLVCASILIGC
                     LIYILVLMIAAYSYPYTEFKKIIWIVGQGVENYFGFYGLFILSVGVFCAILSGVNGFF
                     IATSKVLYSLSENGIVSKRFIQTNQYNSPFYICFFIAIVSAILPFFGREYLLYVVDMS
                     SIGIIVSFVYISLINFKFLCFSVMDKIRSLFSLILSCIFMLLLFFPNSPAALKYPSVI
                     MLLFWIILGILFFKIKKIEC"
     gene            949..>1015
                     /locus_tag="ACJE1S_001931"
     CDS             949..>1015
                     /locus_tag="ACJE1S_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807443.1"
                     /translation="MKTVGVVIPIYNVEKYLRECLD"
BASE COUNT          310 a          109 c          161 g          435 t
ORIGIN      
        1 agtattatat atcaatctga ggggtgttaa gattgctcta tatatacaaa atattttcac
       61 aataattatt ttcatcagta ttcttttttg tgtgataggt atgatgttaa gtgagttttc
      121 ttggaaaaat ttagcaactt atatttcaaa tcaggatatt agtttacaaa atattttaag
      181 ggtagttgcc atagctcctt ggctttatgt aggattcgat tgtgctgttc aagttattca
      241 agatacaaaa aataaaaatt cttggttttt taatcaacta gtctgtgctt ctattcttat
      301 aggttgtttg atttacatat tggttttaat gattgctgct tattcatatc cctatactga
      361 atttaaaaag atcatatgga ttgttggaca gggtgtagaa aattattttg gtttttatgg
      421 tttgtttata ctttcagtgg gtgttttttg tgctatttta agtggcgtaa atgggttttt
      481 tatagcaaca agcaaggtgc tttattcctt gagtgaaaat ggtattgttt caaagcgatt
      541 tatacaaaca aatcaatata actccccttt ttatatttgt ttttttattg ctattgtatc
      601 agcaatatta ccttttttcg gaagagaata tttgctatat gtagttgata tgtcttctat
      661 cggaattatt gtatctttcg tgtatatcag tttaattaat tttaaatttt tatgtttctc
      721 agttatggat aaaattagaa gtttattttc attaatttta agttgtattt tcatgttgtt
      781 attgtttttt ccaaattctc cagctgcact aaaatatcct tctgtgataa tgcttttatt
      841 ttggataatt ttaggaattc ttttttttaa aataaaaaaa attgaatgct gatgctatta
      901 caaaagagtt tttgatataa tattaaaaat aatctaaggt caaatatcat gaaaaccgtc
      961 ggtgtagtaa tccctatcta caatgtagaa aaatatttaa gagaatgctt agata
//
LOCUS       DBBXOW010000144          966 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.145, whole genome shotgun sequence.
ACCESSION   DBBXOW010000144 DBBXOW010000000
VERSION     DBBXOW010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.145"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(58..498)
                     /locus_tag="ACJE1S_001932"
     CDS             complement(58..498)
                     /locus_tag="ACJE1S_001932"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807444.1"
                     /translation="MLNRASEHYGFFGLNRGGITYKEAKISCAPIPVLNEFHHAMSHL
                     CEVFLKDDARYTNLERAIPHFKRGMMDIYKTIIRDFLILNQDALGVKQEALKIRELEY
                     QTIGKPKKVTKNPTSNLISKKEEKVIPGYKELCERIVRQSKNTN"
BASE COUNT          285 a          145 c          133 g          403 t
ORIGIN      
        1 acaaaatagc aagtcaataa gccaaaactg catactaaag cttaattcat atcgctttta
       61 gtttgtattt ttactttgtc tgacaattct ttcacataat tctttatatc ctgggataac
      121 tttttcttct tttttgctga ttaggtttga ggtaggattt tttgttactt ttttgggttt
      181 tcctatggtt tgatattcta attctcttat ttttagagct tcttgtttga ctcctaaagc
      241 atcttggttt aatataagaa aatctctgat gattgtttta tatatatcca tcattccgcg
      301 tttaaagtga gggattgctc tttctagatt ggtatatcgt gcatcatctt ttaaaaatac
      361 ttcgcataaa tgcgacatgg catgatgaaa ttcatttaaa actggtatgg gggcacaaga
      421 gatttttgct tctttatatg ttattcctcc tctatttaat ccaaaaaaac catagtgctc
      481 tgatgcgcga tttagcattt ctatcgctat ttttttctat tttcaaatcc tatatttttt
      541 ctgaaggtat tgtatagatc aattgaatta taaaattcca caacacacga gcttaatatt
      601 tgagaaagat ctctatggtg attatccatg caaattattt tttctttata atgtattttc
      661 tctggtaatc tttcttgaca gcgtatagca ttgattattt ttgctacgat tttttgagta
      721 ttgtttttat ttaataaagc tctataataa agtaaaaagc aaaacacaag ttcatagttt
      781 cttccagaaa ttaaggattc tctatctatt ttgtaaaaat tgagaatata aaatatagta
      841 ttcgaagtct aattttatgc tacttttgcc gacttctcct tttaaaaact gatcttccaa
      901 ttcagtaaaa aaaagcattt gtttttttat taaatgcaac atttgcagga aatatcgcta
      961 ttcctt
//
LOCUS       DBBXOW010000145          942 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.146, whole genome shotgun sequence.
ACCESSION   DBBXOW010000145 DBBXOW010000000
VERSION     DBBXOW010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.146"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(9..938)
                     /locus_tag="ACJE1S_001933"
     CDS             complement(9..938)
                     /locus_tag="ACJE1S_001933"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HGG0807445.1"
                     /translation="MRGYKIFSGSANVEFAKQISKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCVPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIEAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKTKHF
                     KNAIVGSPDIGGVARARSVAKNLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKNKGAKSVMACCTHAVLSGKAYERIASGALDELVVTDTIPLR
                     EQLPNIKVLSVAPVFAEVIRRVYHNESVNSLFI"
BASE COUNT          310 a          199 c          133 g          300 t
ORIGIN      
        1 atagaaaatt aaataaaaag agaatttaca ctttcattgt ggtaaacgcg gcgtattact
       61 tcagcaaata caggagctac gcttaaaact tttatattag gcaattgctc tcttaaagga
      121 atggtatcag taactacaag ctcatcgagc gcccctgaag caattctttc ataagcttta
      181 ccacttaaaa ccgcgtgagt acaacaagcc ataacggatt ttgcaccttt gttttttaaa
      241 gcttcagcag cctttacaat agtacctgca gtatcaataa tatcatcgac taaaatcacc
      301 tctttatctt taacatctcc gataatattc ataacttcgc tctcattagc tttttcgcgt
      361 cttttatcta ctatcactat atcaagtcct aaatttttag ccacacttct agctcttgct
      421 acacccccta tatcaggact tccaacaatt gcatttttaa aatgcttggt tttgatataa
      481 tcattaaata ctatacttcc ataaagatta tcaacaggta tatcaaaaaa accttgaatt
      541 tgccccgcgt gtagatcgat agtagccaca cgatcaatcc ctgctgcttc gattaaattg
      601 gcaacaagtt tagcagtaat aggtaccctt ggatttgctt ttctatcttg tcttgcataa
      661 ccaaaataag gaataatagc tgtaatagaa tttgcacttg agcgtcgcaa agcatctgtt
      721 aagattaaaa gctccattaa attatcattg gtaggtacac aggtgctttg gataatgaaa
      781 acatctttac cacgtacgct ttcatcaatt tgaacgctaa tttctccatc gctaaaacgc
      841 tttactccag catcacttaa aggcaaagaa agatatttag aaatctgttt tgcaaattct
      901 acattagccg aacctgaaaa aattttataa ccgcgcataa aa
//
LOCUS       DBBXOW010000146          818 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.147, whole genome shotgun sequence.
ACCESSION   DBBXOW010000146 DBBXOW010000000
VERSION     DBBXOW010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.147"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..221
                     /locus_tag="ACJE1S_001934"
     CDS             <1..221
                     /locus_tag="ACJE1S_001934"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG0807446.1"
                     /translation="RTRVKYYNQINDFFTLTEREKIGKFPFKNTSYAFDAYEISKYFN
                     DDFLWKKEFGDVKYTFKEPAICKSRPLK"
     gene            313..>818
                     /locus_tag="ACJE1S_001935"
     CDS             313..>818
                     /locus_tag="ACJE1S_001935"
                     /inference="COORDINATES: protein motif:HMM:NF017497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 90"
                     /protein_id="HGG0807447.1"
                     /translation="MFRGAVYQKHRKEFFDSYFGRTFCDIGDTSKQPSQWKKNFLNKK
                     EQMKYKFIISLEGNDVASNLKWAMNSNSLVLAPKITCETWFMEGTLKPNYHFALIDND
                     NLATVIEHFISHPKDALEIINNAHQYVKKFLDKKKEFYIGILVLTKYFYYSGQLDLNK
                     DECKREIL"
BASE COUNT          338 a           89 c          115 g          276 t
ORIGIN      
        1 tacgaactcg ggttaagtat tacaatcaaa taaatgattt ttttacatta acagaaagag
       61 aaaaaatagg aaaatttcct tttaaaaata cttcttatgc ttttgatgct tatgaaatta
      121 gtaaatactt taatgatgat tttttatgga aaaaagaatt tggtgatgta aaatatactt
      181 ttaaagagcc ggccatttgt aaatcaagac ctttaaaata atacaaacaa cattttatta
      241 aaacttgata aaaataggca tttttgtttt ttaaaagaca atataaaata tgaaaataaa
      301 aaagatatag caatttttag aggtgctgta tatcaaaaac atagaaaaga attttttgat
      361 tcttattttg gtagaacttt ttgtgatata ggagatactt caaaacaacc tagccaatgg
      421 aaaaaaaact ttttaaacaa aaaagaacaa atgaaatata aatttataat ttctttagag
      481 ggtaacgatg tagcaagcaa cttaaaatgg gctatgaatt ctaattcttt agttttagct
      541 ccaaaaataa cttgcgaaac ttggtttatg gaaggaactt taaaaccaaa ttaccatttt
      601 gctttaattg ataatgataa cttagctaca gtaatcgaac attttatcag tcatccaaaa
      661 gatgcgctag aaatcattaa taatgctcat cagtatgtta agaaattctt agataagaaa
      721 aaagaatttt atatagggat tttagttttg actaaatatt tttactattc tgggcaactc
      781 gatcttaaca aagatgaatg caaaagagaa attttaga
//
LOCUS       DBBXOW010000147          773 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.148, whole genome shotgun sequence.
ACCESSION   DBBXOW010000147 DBBXOW010000000
VERSION     DBBXOW010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.148"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            27..722
                     /gene="ung"
                     /locus_tag="ACJE1S_001936"
     CDS             27..722
                     /gene="ung"
                     /locus_tag="ACJE1S_001936"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HGG0807448.1"
                     /translation="MKEITINIEDIKINNDWKEFLKEEFSKSYFLEIKKRYIQALNNK
                     AIIYPPSNLTFNAFNLTPLSELKIVLLGQDPYHQPNQAMGLSFSVPCGVKIPPSLLNI
                     YKELKADLNIEPSKSGDLSSWAKQGVLLLNSILSVEAGKPASHSSWGWQEFSDAVISK
                     LSLEKSGLIFILWGNYAKSKKALIDTKKHFILEAAHPSPLARTGFLGCKHFSKANEIL
                     KNLGKKPINWQLT"
BASE COUNT          285 a          108 c          118 g          262 t
ORIGIN      
        1 cctttaattt atttttggaa gtttttatga aagaaattac tataaacatt gaagatatca
       61 aaataaataa tgattggaaa gagtttttaa aagaagaatt tagcaaaagc tattttttag
      121 aaatcaaaaa acgctatata caagctttaa acaataaagc cattatctat cctccttcaa
      181 atttaacctt taatgctttt aatcttactc ctttgagtga gcttaaaatt gtacttttag
      241 gacaagatcc ttaccatcaa cccaatcaag ctatggggct tagtttttct gtgccttgtg
      301 gggttaaaat tcctcctagt cttttaaata tttataaaga attaaaagca gatcttaata
      361 tagaaccttc taaaagcggg gatttaagtt cttgggcaaa acaaggagtt ttacttttaa
      421 attccattct tagcgttgaa gcgggaaagc ctgcaagtca tagctcgtgg ggttggcaag
      481 aatttagtga tgcggtgatt tcaaagttaa gtcttgaaaa atcaggactt atttttatac
      541 tttggggaaa ttatgcaaaa tccaaaaaag ctttaatcga tacaaaaaaa cattttattt
      601 tagaagcagc acatcctagt ccactagcta gaacaggctt tttaggttgt aaacattttt
      661 caaaagctaa tgaaatttta aaaaatttag gaaaaaaacc tataaattgg caattgactt
      721 agaaaaatta tataaatgtt ttttaataat ttaaaaatac taagcccgat ttc
//
LOCUS       DBBXOW010000148          739 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.149, whole genome shotgun sequence.
ACCESSION   DBBXOW010000148 DBBXOW010000000
VERSION     DBBXOW010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.149"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(288..515)
                     /locus_tag="ACJE1S_001937"
     CDS             complement(288..515)
                     /locus_tag="ACJE1S_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HGG0807449.1"
                     /translation="MNNVLLHRITEKGNIRYYSIEIIATLFEEYMVERVYGNVRFKSC
                     TGRKNNVFSSFNEAQIFFERLKKQKMKKGYA"
     gene            complement(528..>739)
                     /locus_tag="ACJE1S_001938"
     CDS             complement(528..>739)
                     /locus_tag="ACJE1S_001938"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807450.1"
                     /translation="NENIQKNEILIPKRVLFDEKTLKMIEMMIPTYKDEISNTNKENE
                     KINQMIKLAIEKMFKNDFLNKINNF"
BASE COUNT          241 a           96 c           72 g          330 t
ORIGIN      
        1 ttagcctatt attaattgtt tatatgataa aatggcattt ttttgaataa aaccaagcaa
       61 aatgttttag cctattatta attgtttgta tgataaaata gtaattttat aatggaagct
      121 agagaatgtg ttttagccta ttgttaattg tttacatggt aaaattatta atttaatata
      181 tattttgagt atgcggtttt agcctattat taattgttta tatggtaaaa tagacttatc
      241 tcaaaagcct attttatcaa tgtttttctt gttttttaag caaaaactta cgcataccct
      301 tttttcattt tttgtttctt taacctctca aaaaaaattt gtgcctcatt aaaacttgaa
      361 aatacattat tttttcttcc tgtgcaactt ttaaaacgca catttccgta aactctctca
      421 accatatatt cctcaaatag agtggcaata atttctatgc tataatagcg aatgtttcct
      481 ttctcagtta ttctgtgcaa caaaacatta ttcataaaaa aacctaatta aaaattattt
      541 attttattca aaaaatcatt tttaaacatt ttttctatag caagcttaat catttgatta
      601 attttctcat tttctttatt tgtattagaa atttcatctt tgtaagtagg aatcatcatt
      661 tctatcattt ttaatgtttt ttcatcaaat aatactcttt ttggaattaa tatttcattt
      721 ttttgaatat tttcattat
//
LOCUS       DBBXOW010000149          738 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.150, whole genome shotgun sequence.
ACCESSION   DBBXOW010000149 DBBXOW010000000
VERSION     DBBXOW010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.150"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..734)
                     /locus_tag="ACJE1S_001939"
     CDS             complement(<1..734)
                     /locus_tag="ACJE1S_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807451.1"
                     /translation="MKYKTIVFSILAIIFSACSTHQEQNVFYQQNLFSQTCNKQFFQE
                     QQEKISQNKDVIFTGLNTGYIARDCKDFNLSNSIFDKVEDSYKYDVDLQSLSKKSTRA
                     LASTLINEGVNDYQGAWYERTMLNVYKGLNFMSLGDFVNARVEFNRALMRQEKAKEYF
                     ASEIKKAYQEASKEEKLRQNIDNNIKIVLKQYENLFKDFNAQKDYTNPYVTYISSIFF
                     FMDYDYKKAADLLKEVYVLNLNKEIE"
BASE COUNT          245 a          120 c           82 g          291 t
ORIGIN      
        1 ttttctattt ctttatttaa attcagcaca taaacttctt taagtaaatc cgctgctttt
       61 ttataatcat aatccataaa gaaaaatata gatgaaatat aagttacata aggattggta
      121 taatcttttt gtgcattaaa gtctttaaaa agattttcat attgttttaa aacaattttt
      181 atattattat cgatattttg ccttaatttt tcttccttgc tagcctcttg atatgctttt
      241 ttaatttcgg aagcaaaata ctcttttgcc ttttcttgtc tcatcaatgc gcggttaaat
      301 tccaccctag cattaacaaa atctcccaag ctcataaaat ttaaaccctt ataaacatta
      361 agcatggttc tttcatacca agcaccttga taatcattta caccctcatt tatcaaagta
      421 gatgcaagtg ctcttgtgct tttcttggat aaactttgca aatccacatc gtatttataa
      481 gaatcttcaa ccttatcaaa aatagaatta cttaagttaa aatccttaca atctcttgcg
      541 atataacctg tatttaaacc tgtaaaaatc acatctttat tttgactgat cttttcttgt
      601 tgctcttgaa aaaattgctt attgcaagtt tgagagaata aattttgttg atagaataca
      661 ttttgttctt gatgagtaga gcatgctgaa aaaattatcg ctaaaataga aaaaacaatt
      721 gttttatatt tcattata
//
LOCUS       DBBXOW010000150          720 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.151, whole genome shotgun sequence.
ACCESSION   DBBXOW010000150 DBBXOW010000000
VERSION     DBBXOW010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.151"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..>720
                     /locus_tag="ACJE1S_001940"
     CDS             <1..>720
                     /locus_tag="ACJE1S_001940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HGG0807452.1"
                     /translation="HEEAEQFLLDLSIELKKYGLSLNHKKTEIIKLPSSFEKPWKNKL
                     KLFKLDSYSGGIKYTGIMPFLDMALNLMKDNKNNAAILNYAFKILIKKKMTPSAKKYF
                     INIIHHLVLLYPYLIFLLDKIFNEKELITQENIEKISSDIFNLGKEKRNYEAMSYALY
                     FALKYNFKLKEKINLLEEAKRKEDCILMLLCYLYDKKNNKDTEEYKIIANNFIINTTS
                     KNTNFKILDDEYWLFAYEVLS"
BASE COUNT          319 a           76 c           85 g          240 t
ORIGIN      
        1 tcacgaagaa gctgaacaat ttctcttaga tttatccata gaacttaaaa aatatgggtt
       61 atccttaaat cataaaaaaa cagaaattat aaaattacct agctcatttg aaaaaccatg
      121 gaaaaataag ctaaagcttt ttaaattaga ttcttatagt ggtggaataa aatatactgg
      181 aataatgcca tttttagata tggctttgaa cttaatgaaa gataacaaaa acaatgctgc
      241 tattttaaac tatgcattta aaattttaat taaaaagaaa atgaccccaa gcgctaaaaa
      301 atattttatt aacataattc atcatttagt tttactatac ccatatttga tttttttgtt
      361 agataaaata tttaatgaaa aagagcttat tacacaagaa aatatagaaa aaatatcttc
      421 agatattttt aatctaggca aagaaaaaag aaactatgaa gcaatgtctt atgctcttta
      481 ttttgcacta aaatataatt ttaaattaaa agaaaaaatt aatctattag aagaagcaaa
      541 aagaaaagaa gattgcattt taatgttatt gtgttacctt tatgataaaa agaataataa
      601 ggatacagaa gaatataaaa taatagcaaa taattttatt ataaatacaa cttcaaaaaa
      661 tacaaatttt aaaattctag atgatgaata ttggttgttt gcctatgaag ttttatccag
//
LOCUS       DBBXOW010000151          709 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.152, whole genome shotgun sequence.
ACCESSION   DBBXOW010000151 DBBXOW010000000
VERSION     DBBXOW010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.152"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..663)
                     /locus_tag="ACJE1S_001941"
     CDS             complement(<1..663)
                     /locus_tag="ACJE1S_001941"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807453.1"
                     /translation="MRSFQFLKEITITPKEWLEQSIATKQNEFAFAWGGMINFSFLEN
                     IKLKFTNGIIFEDVAFGTILFAQTKNIYILPRVVYNYRIRQNSIMQSLKNSNLSEYLS
                     YMREYFISDSEVKSYHVVISKIITIEKLCAFITSFHNIEVSYLMRIAFFNYLRQWSLE
                     IFNLSKDPMDFFDQVVILTHDLFVHKNKKILYKEANSKDIFIWLSQIITLKNTLLQTK
                     DKT"
BASE COUNT          255 a          111 c           72 g          271 t
ORIGIN      
        1 ggttttatct ttagtttgca aaagagtatt ttttaacgta attatttgac ttaaccaaat
       61 aaagatatct ttagaatttg cttctttata taaaattttc ttatttttat gcacaaataa
      121 atcatgggtt aatatcacca cttgatcaaa aaaatccatg ggatccttgc ttagattaaa
      181 aatttccaaa ctccactgtc tcaaataatt aaaaaaagca attctcatta aataagacac
      241 ttcgatatta tgaaaagaag ttataaaagc acaaagtttt tctatggtta taattttact
      301 aatgacaaca tgatagcttt ttacctctga atcgcttata aaatattctc tcatataact
      361 taaatattct gacaaattac tattttttag agattgcata atgctatttt ggcgaatcct
      421 ataattatat acaaccctag gcaatatata aatattttta gtttgggcaa ataaaatcgt
      481 accaaatgct acatcttcaa aaataattcc attggtaaat ttcaatttta tattttctaa
      541 aaaactaaaa ttgatcatgc ctccccatgc aaatgcaaat tcattctgtt tcgttgcaat
      601 actttgttct aaccattctt taggtgtgat agttatttct tttaaaaatt gaaaagaacg
      661 caatctactc cattcttttt tatttttagt ctcatcaata aacatctca
//
LOCUS       DBBXOW010000152          707 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.153, whole genome shotgun sequence.
ACCESSION   DBBXOW010000152 DBBXOW010000000
VERSION     DBBXOW010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.153"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(1..702)
                     /locus_tag="ACJE1S_001942"
                     /pseudo
     CDS             complement(1..702)
                     /locus_tag="ACJE1S_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818182.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
BASE COUNT          244 a          130 c           83 g          250 t
ORIGIN      
        1 attgtattaa aatatgcgaa ctatttaaaa cataatcaca accgctctcc atttctcttc
       61 ctaaaatata atttaaaggt ggaacagccg aacccgaatt atcaatcacg ccatccacat
      121 accaaggagc tatttttgct atgagtaaag ataggtatcc tccataagac cccccccata
      181 aatttttggt aaatctgcaa gttttggaaa gcgtttaact agatctttta aagcattgat
      241 atgatcaata gctgccataa tgccaaaatt ttgataatct ccattaggcg ggataaaatc
      301 acaagaaagt cctatttttt ggctttcatc aaccaaacct gcttgtttaa tttctccagc
      361 tctttgctcg ataaaaggga taatttgttc aaaattatct tcattagcta gtaaatgtcc
      421 caaattaata ttttttaaaa tattattaat acgctccaaa tcatctttgt ttggaataag
      481 ttttggatta tacttttgat caatactttg tcttgcacaa aaacaatgat aaaaaacatg
      541 cactgctaca acatcaaaat ttttagcaat ataatttcta taagaatcta aaaaatatat
      601 atttgcattg gctccataac ctcctattat aaaaactata gctttaatct ctttttcatc
      661 atcataactt atacggtatt caagtttgct agttcttttt atattta
//
LOCUS       DBBXOW010000153          667 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.154, whole genome shotgun sequence.
ACCESSION   DBBXOW010000153 DBBXOW010000000
VERSION     DBBXOW010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.154"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..>667
                     /locus_tag="ACJE1S_001943"
     CDS             <1..>667
                     /locus_tag="ACJE1S_001943"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807454.1"
                     /translation="KIYESGFLDQKNDWTWFLGYNRNSGSKKISSKLWLERYKHIGHF
                     AFVWQGVINFRFLKNIDLKFIDGIFHQDVHFGFLLFAQSSYIYLLSKKLLVYRIRNGA
                     TTVRNFKNNLKDEIPFYIQELLSYFEIKTAKEYYSIYSWIQIILNVMHSHNIKNNLHS
                     DLYYLFIGNLSEQILKLKFSYKQDPMHLSGFINFIKTFVGLHRILQNNMQKNSVQLNQ
                     LQSK"
BASE COUNT          249 a           67 c          101 g          250 t
ORIGIN      
        1 taaaatatat gaatctggat ttttggatca gaaaaatgat tggacttggt tcttagggta
       61 taatagaaat agtggtagta aaaaaattag ttcaaaatta tggttagaac gatataaaca
      121 tattgggcac tttgcgtttg tttggcaagg tgtgataaat tttagatttc ttaaaaatat
      181 cgatttgaaa tttattgatg gcatttttca ccaagatgta catttcggtt ttttgctatt
      241 tgcgcaaagt agttatattt atttattatc taagaaatta ttggtatatc gtattcgaaa
      301 tggtgcaaca actgtaagaa attttaaaaa taatcttaaa gatgaaatac ctttctatat
      361 acaggaattg cttagttatt ttgaaatcaa aacagctaaa gagtattata gtatatatag
      421 ttggatacaa attattttaa acgttatgca ttcgcataat ataaaaaata atttacactc
      481 tgatttatat tatttgttta ttggaaattt gagtgagcaa attttaaagt taaaatttag
      541 ttacaaacaa gatcctatgc atttgagtgg ttttattaat tttataaaaa cttttgtagg
      601 cttacatcga atattgcaaa acaatatgca aaaaaattca gtccaactta accaacttca
      661 atctaaa
//
LOCUS       DBBXOW010000154          656 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.155, whole genome shotgun sequence.
ACCESSION   DBBXOW010000154 DBBXOW010000000
VERSION     DBBXOW010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.155"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..>656)
                     /locus_tag="ACJE1S_001944"
     CDS             complement(<1..>656)
                     /locus_tag="ACJE1S_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /protein_id="HGG0807455.1"
                     /translation="ERTEITAEFFNNDFWEFDKDIVFVCAGVVHPKAIEYLKDRNLVI
                     TQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP
                     DDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYN
                     CTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSI
                     "
BASE COUNT          229 a          112 c           76 g          239 t
ORIGIN      
        1 aatactttta caaactttat aataagcctt aagtaaaaat tcattttgtt tatttaaact
       61 taaaggttct aatttttcaa aaggtttatt taaatcttta tcaagtaaat tctcacaagc
      121 ccataaaaaa ggtttttcta tggttccttc tatccttgct ccaccttcgg tacagttgta
      181 ggtggtgata cccatttttc tagtatttgg aatcatttca ttttcaaacc aatttttaaa
      241 taaaagccat atactatgag tttcaacttt tccatttcct ccataagctg tagttaaaat
      301 atgttcatac atttgacttt cataattagc tgaattttga taatcatcag gatgagaatt
      361 gccattttca gcataagcta aatcctgtcc tataaaaatg atgtttttat gacttagata
      421 agttgctaga taagataatg tatgtgcaac actaaatcct acagcagcat aagaaaaatc
      481 tttaagattt atataatatg gaaaagcaag aactttttga gttatgacta aatttctatc
      541 ctttaaatac tcaatcgcct ttggatgaac aacccctgcg caaacaaaca caatatcctt
      601 atcaaattcc caaaaatcat tattaaaaaa ctcagcagta atttcagttc tttcta
//
LOCUS       DBBXOW010000155          653 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.156, whole genome shotgun sequence.
ACCESSION   DBBXOW010000155 DBBXOW010000000
VERSION     DBBXOW010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.156"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..611)
                     /locus_tag="ACJE1S_001945"
     CDS             complement(<1..611)
                     /locus_tag="ACJE1S_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0807456.1"
                     /translation="MLINQSFEIDSCDDVELGIKRTSKLEYRISYDDEKEIKAIVFVI
                     GGYGANANIYFLDSYRNYIAKNFDVVAVHVFYHCFCQRRSDVEKYSAYKYFQEEDIEN
                     IKNLLNQFHFSYGEINNDNALFLANSLVKHVENLKMQNKLDHNFKLNFTSTFISPNGD
                     YQNFGIMAALDHINALKDLVKCFPKFADLPKIYGGGSYGGYLA"
BASE COUNT          231 a          110 c           71 g          241 t
ORIGIN      
        1 aaggctaagt atcctccata tgaccccccc ccataaattt ttggtaaatc tgcaaatttt
       61 ggaaagcatt taaccaaatc ttttaaagca ttgatatgat caagtgctgc cataatgcca
      121 aaattttgat aatctccatt aggcgagata aaagttgaag taaaatttag tttaaagtta
      181 tgatcgagtt tattttgcat ttttaaattt tctacatgtt tcactaaaga attcgctaaa
      241 aaaagcgcat tatcattatt tatttcacca taagaaaaat gaaactgatt taataaattt
      301 ttaatatttt caatatcttc ctcttgaaaa tatttgtatg cactatattt ctcaacatct
      361 gaacgccttt ggcaaaaaca atgataaaaa acatgcactg ctacaacatc aaaattttta
      421 gcaatataat ttctataaga atctaaaaaa tatatatttg cattggctcc ataacctcct
      481 atgacaaaaa ctatagcttt aatctctttt tcatcatcat aacttatgcg atattcaagc
      541 ttactggttc ttttaatacc tagttctaca tcatcacaag aatcgatttc aaagctttgg
      601 tttatgagca tatattttcc tttttaatta atgatcaatt ttaactgatt ttc
//
LOCUS       DBBXOW010000156          632 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.157, whole genome shotgun sequence.
ACCESSION   DBBXOW010000156 DBBXOW010000000
VERSION     DBBXOW010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.157"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            67..>632
                     /locus_tag="ACJE1S_001946"
     CDS             67..>632
                     /locus_tag="ACJE1S_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG0807457.1"
                     /translation="MKKLSVKGNKGRNKRSYVQIMDILLTQLEENLPSKVVASRYDIT
                     LQTVYKWKKIYAKHLENYKKLKEEAKIKNADKENKDLQEEKIHNAACGKRLKLLRTSL
                     NLSQDRIAEILGITVAIYMRMEKGYTVLNSYIITKLYKFLGINPVYLITGEGDSFLIK
                     DPDLFKKINTEQKKYSNRNNTKENEEDL"
BASE COUNT          295 a           64 c           95 g          178 t
ORIGIN      
        1 atattctgcg aatagatttt agataaaatt aaaataatat tttaggcaca aggaaaaata
       61 aaaataatga aaaaattatc tgtaaaaggc aataaaggaa gaaacaaaag aagctatgtt
      121 caaataatgg atattttatt aacacaattg gaggaaaatt taccttctaa agtggtagct
      181 tcaagatatg atattacttt gcagactgtc tataaatgga aaaaaatata tgcaaagcat
      241 ttagaaaatt acaaaaaatt gaaagaagaa gctaaaatta aaaatgcaga taaagaaaac
      301 aaagatttac aagaagaaaa aattcataac gcagcttgtg gaaagagact aaaactttta
      361 agaacttccc ttaatttaag tcaagatcgt atagcagaaa tcttaggcat aacagtagct
      421 atttatatga gaatggaaaa agggtataca gtattaaaca gctacataat tacaaaactt
      481 tataagttct taggtattaa tcctgtttat ttaattacag gtgaaggaga ttcctttcta
      541 attaaagatc ctgacttatt taaaaaaatt aatacagaac aaaagaagta cagtaataga
      601 aataatacta aagaaaatga agaagattta tt
//
LOCUS       DBBXOW010000157          614 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.158, whole genome shotgun sequence.
ACCESSION   DBBXOW010000157 DBBXOW010000000
VERSION     DBBXOW010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.158"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(<1..224)
                     /locus_tag="ACJE1S_001947"
     CDS             complement(<1..224)
                     /locus_tag="ACJE1S_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HGG0807458.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDAIGI"
     gene            complement(372..>614)
                     /locus_tag="ACJE1S_001948"
     CDS             complement(372..>614)
                     /locus_tag="ACJE1S_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HGG0807459.1"
                     /translation="ITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDF
                     AAESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          186 a          108 c          109 g          211 t
ORIGIN      
        1 aagataccta tagcatcatt accattgttt atagcttgac ctaaagtagc tgcttgtgaa
       61 cgcaaagaat ctgctatcgc catccctgaa gcatcatctg ctgcggagtt gattctaaga
      121 cctgaactaa gtctgcttaa agacttatcc agctctctag cattaacaac tgaatttgca
      181 tgtgcgttta atgcaccgat gttggtgttt atcctaaaac ccattttaaa tcctttcaaa
      241 atattgcatc gaaaagatta aagcaagaag tgttccaagt tttagtttaa ttaaaaattc
      301 tagagtttaa aataaaaaaa gcctagtttt aaaaactagg cttggatttg tatatattac
      361 agctttttaa actactgtag taatcttaaa acattttgtt gaacagaatt agcctgtgcc
      421 atggcataag agccgctttg agctaagata tttgctttag agtagtttgc actctcggct
      481 gcaaagtcta catcacggat ttgcgattct gctgctttaa cgtttacttg agtaacagtg
      541 atgttgttta tagttgatgt aacttgattt tgcaccgaac caatgtctgc tctgatttga
      601 tcaagatttg ttat
//
LOCUS       DBBXOW010000158          585 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.159, whole genome shotgun sequence.
ACCESSION   DBBXOW010000158 DBBXOW010000000
VERSION     DBBXOW010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.159"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            191..>585
                     /locus_tag="ACJE1S_001949"
     CDS             191..>585
                     /locus_tag="ACJE1S_001949"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807460.1"
                     /translation="MEILLTIIPRVFYEEMITSSLILYFTAAIYLAILSILFMYYKEK
                     NNISHQAVMLGTFIFCIIFNGSIIYVICSFIFQYYTTEMPCLFLWKIFIFIMVISYVL
                     IFLLFPQSCFGGLIIVIFTAFGNLIFTPLS"
BASE COUNT          185 a           63 c           75 g          262 t
ORIGIN      
        1 tatttatatt tatatatgat gcaattgata aagagatata aaaggcttta atttcattgg
       61 gaatgcttta tctttcactt ttatagctgt attatcaatt atggctgcaa taggttcaat
      121 aatgttttta gggctttata cttatagatt agagaatttc taattaatta ttaaaactaa
      181 aggaataaaa atggaaatat tattaacaat aataccgcga gtattttatg aagaaatgat
      241 tacaagctca cttattttat attttacggc agctatttat cttgcaatat tatctatttt
      301 gtttatgtat tataaggaaa aaaataatat ttctcatcag gcagttatgc tagggacttt
      361 tattttttgc attattttta atggatcaat aatttatgtt atttgctctt ttatttttca
      421 atattacaca acagaaatgc cgtgtttatt tttatggaaa atttttatat ttataatggt
      481 tatttcttat gttttgattt ttttactatt tccacaatct tgctttggtg gattaattat
      541 agtaatcttt acagcttttg gtaatctcat ttttactcct ctatc
//
LOCUS       DBBXOW010000159          544 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.160, whole genome shotgun sequence.
ACCESSION   DBBXOW010000159 DBBXOW010000000
VERSION     DBBXOW010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.160"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(3..87)
                     /locus_tag="ACJE1S_001950"
     tRNA            complement(3..87)
                     /locus_tag="ACJE1S_001950"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(51..53),aa:Ser,seq:gga)
     gene            192..268
                     /locus_tag="ACJE1S_001951"
     tRNA            192..268
                     /locus_tag="ACJE1S_001951"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:226..228,aa:Met,seq:cat)
BASE COUNT          190 a           72 c           79 g          203 t
ORIGIN      
        1 ggcagacagg aagggattcg aaccctcgaa agcttgcact ttacacgcgt tccaggcgtg
       61 ctccttcaac cgctcggaca cctgtctaat taaaaattaa attatatcta aaaaagcttt
      121 aaataaaatt ttagtaaaaa agagtataat tacattttca ttttgtaaaa taatctttaa
      181 agatttatta tgtcagggta gctcagctgg ttagagcgct ggtctcataa gccggaggtc
      241 gggagttcaa gtctccccct tgacaccatt tttaaaactt cttttaaaaa atcaccctta
      301 aattatttta attacaaatt ttatcttaat agttttaaat tataaatttg tttttatctt
      361 agaatttaag ttctatttta aatttttggc atttaaattt gtaccatctt ttatatggct
      421 tgaaataaaa tttgtttgaa gagatggttt tgagataagg tatattttat aaaagataga
      481 aatttgatta ttgtatttta aagattaatg tttaaaaatt tatctcgaaa taatcaaaaa
      541 aata
//
LOCUS       DBBXOW010000160          480 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.161, whole genome shotgun sequence.
ACCESSION   DBBXOW010000160 DBBXOW010000000
VERSION     DBBXOW010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.161"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            210..>480
                     /locus_tag="ACJE1S_001952"
     CDS             210..>480
                     /locus_tag="ACJE1S_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807461.1"
                     /translation="MVSAYPKPIKIFKNTAIKVSNFPFDPNLKIKIYSLNSYIGNIIP
                     QFTNTKDSIIINFTGKSVTDDSRFRVEFLNNDKPIGFFFDFDVTLQ"
BASE COUNT          182 a           64 c           52 g          182 t
ORIGIN      
        1 aaatcacgaa aaaatcaatt ttaaaggcat tgttttatta tcatgaaaaa ttttttatag
       61 cagcaatatt tctgattata ttttcattaa ccttttatat tttatatgat aaaaaaaagg
      121 ataatgtgtt taaactcaat acctgccttc cattaaaatg tgatttaaat tctcaagatt
      181 gcaccttttt gtttaaagga aaataaattt tggtatctgc ttatcctaaa cctataaaaa
      241 tctttaaaaa taccgccatt aaagtaagta attttccctt tgatccaaat ttaaaaatta
      301 aaatttatag tttaaactca tatataggaa acattatccc acaatttaca aacacaaagg
      361 attcaattat tataaatttt acaggaaaaa gtgttacaga tgattctcgc tttagggttg
      421 agtttttaaa caatgataaa cccataggct ttttctttga ttttgatgtt actttgcaaa
//
LOCUS       DBBXOW010000161          468 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.162, whole genome shotgun sequence.
ACCESSION   DBBXOW010000161 DBBXOW010000000
VERSION     DBBXOW010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.162"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..>468
                     /locus_tag="ACJE1S_001953"
     CDS             <1..>468
                     /locus_tag="ACJE1S_001953"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807462.1"
                     /translation="VYLRDVAELFISMCSQAIKDDSHLDYHFLYPYQNKKSKILSDYK
                     QTLQWWGEIFGKENLIVRLFNKNEFYRGDLLKDFIYSVDLKWDEKFQIPIKENETLDL
                     IGFELLSRVNRLKPFMFKSRYFDIVEYFDRNCTNVKQYSHLKFQPPKEIMQSYI"
BASE COUNT          181 a           42 c           78 g          167 t
ORIGIN      
        1 gtatatttaa gagatgttgc tgagttgttt atatctatgt gttcacaggc tatcaaggat
       61 gatagtcatt tggactatca ttttttatat ccttaccaaa acaaaaaatc aaaaatttta
      121 agcgattata aacaaacact acagtggtgg ggagaaattt ttggtaaaga aaatttaatt
      181 gtaagactgt ttaataaaaa tgaattttat cgaggagatt tattaaaaga ctttatatat
      241 agtgtagatt tgaaatggga tgagaaattt caaattccaa taaaagagaa tgaaactttg
      301 gatttaatag gatttgagct tttaagtagg gttaatagat taaaaccttt tatgtttaaa
      361 agtagatatt ttgatatagt tgagtatttt gatagaaatt gtacaaatgt aaaacaatat
      421 tctcatctta aatttcagcc tccaaaagaa ataatgcagt cttatata
//
LOCUS       DBBXOW010000162          421 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.163, whole genome shotgun sequence.
ACCESSION   DBBXOW010000162 DBBXOW010000000
VERSION     DBBXOW010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.163"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            complement(40..>421)
                     /locus_tag="ACJE1S_001954"
     CDS             complement(40..>421)
                     /locus_tag="ACJE1S_001954"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807463.1"
                     /translation="LVYGIYIGIIALIYFFGKDFLLVFDNLKNFFLSVNPVYYMLILP
                     ISMFFVFIVISFLEKRGIKGVLVYLLTVIPLLFLFFHYSDAKLSVDYLNSEAMFIFFL
                     ILSFSLIVPVAIYEMFREKEEVEG"
BASE COUNT          196 a           67 c           40 g          118 t
ORIGIN      
        1 aagaaaaaat aaaagtccta ttgaaatcat ttttactcct taaccttcaa cttcttcttt
       61 ttctctaaac atttcataaa ttgccactgg tacgataaga gaaaatgaaa gaattaagaa
      121 aaaaataaac attgcttcac tattaaggta atcaacactc aatttggcgt cagaataatg
      181 aaaaaataaa aaaagtaatg gaataacagt taataaatat actaaaacac cctttatccc
      241 ccttttttcc aagaagctta ttacaataaa aacgaaaaac atgcttatag gcaaaatgag
      301 catataataa acaggattta ctgataagaa aaagtttttt aaattatcaa aaaccaacaa
      361 aaaatctttt ccaaaaaaat aaatcaaagc aataatgcct atataaatcc catagactaa
      421 a
//
LOCUS       DBBXOW010000163          414 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.164, whole genome shotgun sequence.
ACCESSION   DBBXOW010000163 DBBXOW010000000
VERSION     DBBXOW010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.164"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            5..91
                     /locus_tag="ACJE1S_001955"
     tRNA            5..91
                     /locus_tag="ACJE1S_001955"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Leu,seq:caa)
BASE COUNT          155 a           54 c           54 g          151 t
ORIGIN      
        1 taaagcctga gtggtgaaac tggtagacgc gccagactca aaatctggta agggtaacct
       61 tgtgtcggtt cgagtccgac ctcaggcacc attccacttg aatttaacta acttcaaaga
      121 ttttattata aaaatattta tcatttgtat ttttattgtt tccatttgtt ttgaaaaatt
      181 catttaatat tagtttttcc cagttaaagc atttattata atatatgaag aatattttta
      241 tgcaagcaaa tatgctttaa attatgttaa acatttaatt ataaattatt taaaaacaat
      301 aagctcactc tcttaaaata agataaaaat agccctatat tcttaaataa gattaaaaat
      361 gtatgattaa acttaaatta aattaaaatt tgatgtagtt cgcgcaatag agaa
//
LOCUS       DBBXOW010000164          386 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.165, whole genome shotgun sequence.
ACCESSION   DBBXOW010000164 DBBXOW010000000
VERSION     DBBXOW010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.165"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..>386
                     /locus_tag="ACJE1S_001956"
     CDS             <1..>386
                     /locus_tag="ACJE1S_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HGG0807464.1"
                     /translation="DEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNI
                     ANTTSFNGKQLLSGNFINQEFQIGASSNQTVKATIGATQSSKIGLTRFETGGRISSSG
                     EVQFTLKNYNGIDDFQFQKVVISTSVG"
BASE COUNT          149 a           66 c           65 g          106 t
ORIGIN      
        1 gatgagcaac ttaaaatctt agatacaatc aaaactaagg caactcaagc agctcaagat
       61 ggacaaagtt taaaaacaag aaccatgctt caagcagata tcaaccgttt aatggaagaa
      121 cttgacaata tcgcaaatac tacttcattt aacggtaagc aacttttaag tggaaatttt
      181 atcaatcaag aatttcaaat cggtgctagt tcaaatcaaa ctgtaaaagc taccatagga
      241 gcaactcaat cttctaagat aggtttaaca cgctttgaaa caggaggaag aatttcatct
      301 agtggcgaag tgcaatttac tcttaaaaac tacaacggta tagatgattt tcagtttcaa
      361 aaagttgtga tttcaacttc agttgg
//
LOCUS       DBBXOW010000165          371 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.denovo.166, whole genome shotgun sequence.
ACCESSION   DBBXOW010000165 DBBXOW010000000
VERSION     DBBXOW010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.denovo.166"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..>371
                     /locus_tag="ACJE1S_001957"
     CDS             <1..>371
                     /locus_tag="ACJE1S_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HGG0807465.1"
                     /translation="RKENSPYFFNNENYFIRTLLNKDHLILQSQKNKNIIYVSYHSKE
                     DPLTPANFKEQTMQILKILGYDVSLNLIDENKIDGKFIKNLDHGCGIPDKALFRKELP
                     LMLEKLQGRKSFMQENSISYP"
BASE COUNT          155 a           41 c           48 g          127 t
ORIGIN      
        1 gcgtaaagaa aattcacctt atttttttaa taatgaaaat tattttatta gaacattgtt
       61 aaataaggat catttgattt tgcaaagtca aaaaaataaa aatattattt atgtgagtta
      121 tcatagtaaa gaagatcctt taactccagc aaattttaaa gaacaaacca tgcaaatatt
      181 aaaaatttta ggttacgatg taagcttaaa tttgatagat gaaaataaaa ttgatggaaa
      241 atttattaaa aatttagatc atggttgtgg tatacctgat aaagccttat ttagaaaaga
      301 acttccttta atgcttgaaa aactacaagg aagaaaatct ttcatgcaag aaaattccat
      361 ctcttatcct t
//
LOCUS       DBBXOW010000166        21897 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Campylobacter coli isolate CA21CH-0351-6-1
            SAMN37599094-rid24027313.guided.023, whole genome shotgun sequence.
ACCESSION   DBBXOW010000166 DBBXOW010000000
VERSION     DBBXOW010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN37599094
            Sequence Read Archive: SRR26214839
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 19-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002477353.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002477353.1
            Genome Coverage       :: 117x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 00:29:31
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 1,979
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,900
            CDSs (with protein)               :: 1,900
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 28 of 35
            Pseudo Genes (incomplete)         :: 5 of 35
            Pseudo Genes (internal stop)      :: 6 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21897
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN37599094-rid24027313.guided.023"
                     /isolate="CA21CH-0351-6-1"
                     /isolation_source="Retail chicken"
                     /db_xref="taxon:195"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="52.6293 N 1.2979 E"
                     /collection_date="2021-10-15"
                     /collected_by="Quadram Institute Bioscience"
     gene            <1..644
                     /locus_tag="ACJE1S_001958"
     CDS             <1..644
                     /locus_tag="ACJE1S_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807466.1"
                     /translation="KQKDLNFLLGVRNKIALKVHNYMQEYSTSPKDLSLICLREHKHI
                     EFFQRFYKALAYFVAFRKKLDEEQKIKNLISNIHEYFGCHFINSDFNNLQNFQKNDFF
                     TLPEKCLQYFHLAMIHLCFMVLNPLNFKDSNRHLDKAINYLIDGTFEIYELIFKEYFL
                     LFPKDEELKDELKKIKNLEFKILMQEVSRVKLLNHYKEFCEEIFYNIELEKII"
     gene            706..1599
                     /gene="msrP"
                     /locus_tag="ACJE1S_001959"
     CDS             706..1599
                     /gene="msrP"
                     /locus_tag="ACJE1S_001959"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HGG0807467.1"
                     /translation="MIVTPEKLYKQRRDFFKLGAGALIGSSLIVSKLSALNFINDTNA
                     NKLEISNEELATNYINFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPFTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIDMAKPTSEAKFIKFTTLLDKNQFPD
                     QDALFPTVEYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFVKEQPIGTWEKYAPNEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYAGMDLKANY"
     gene            1599..2147
                     /locus_tag="ACJE1S_001960"
     CDS             1599..2147
                     /locus_tag="ACJE1S_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric reductase-like transmembrane
                     domain-containing protein"
                     /protein_id="HGG0807468.1"
                     /translation="MRTKYFKFLAYFAFLASLIYGFYHILKAFDFVKEAYIYTGVFAL
                     FFLNLSLLFSLCKFKKTKSYPKLLGIFAAFWAFLHFLNYFIFDRNANFLRLFDDISHR
                     LLEASGFFAFIIIFFMFLSSFRFFKRIEKIRKLGYVCLVLASYHYFLSPKVPMFWEWS
                     ALMLSLVYFMIRYLKFFKFKKA"
     gene            complement(2144..3856)
                     /locus_tag="ACJE1S_001961"
     CDS             complement(2144..3856)
                     /locus_tag="ACJE1S_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG0807469.1"
                     /translation="MVRLKEFLSLKNIEESQIYKELKCSKNEALILRELCKNYVISIS
                     SINAFTLLTGIFGSEKYSYLDTLEDLKRLIERGFVNQNSGFFKNIESNKSQNLILSLL
                     QSELSLSEYFLEFLEAKPRLNLDKKEAYGEYLEYLKDEFMRVELYERLSFIRSSTYSD
                     ELKAQIKLYEKHIKERLKKSKFYNILADIFKEYSLEYKEQIIFLALLKEEYTLSNENS
                     VSREMNSLLSLVSENDLEKHKNKSLLQENAPLLNLIEYDEYLNAFGDISKSFFITDEI
                     LQRIINFEPKQNKKIKIENVLKEQDIFELIEPSIDINDIIMPQNTKELLENILKQQDK
                     KVLERLNSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKTVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVESSSGSDKMHNQMQNIF
                     LEQIERFNGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKMWEKFLPRKASFE
                     KAFDVNLLANYELSGAQILMVVKNTALKVAVTEDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(3858..4679)
                     /locus_tag="ACJE1S_001962"
     CDS             complement(3858..4679)
                     /locus_tag="ACJE1S_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807470.1"
                     /translation="MKIGLLLCFFVSLVCAQIYKGEIYFYDLKDKQVFAIVYDNAPFV
                     PIFDRDVNQTSSSFLILSDLDTNIEIALFQTANSWEDGEKKYKISSSKELVFDNKKIQ
                     GNKLGTTTLELIKEQNNIRIKRSLDFLAHQDEIRQFRPMYNDIVSFEQIRQKPIVLKD
                     GKLSFEEWYYFYEEDNRAILELNNFVFDMDKKVFLSLNELYDVDNLKFKELLHQKLNL
                     VCDECFDDMEQVFFNNNFLITNLGLRLCYLPYENHYLNENICVDFNENEIKEFRK"
     gene            complement(4676..5158)
                     /locus_tag="ACJE1S_001963"
     CDS             complement(4676..5158)
                     /locus_tag="ACJE1S_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG0807471.1"
                     /translation="MRKIFIFFLILFFSACALKNQDYSSQKMKVVFSTPTIKINDFGF
                     LKKENKALNLEVYKLGQAFFKLKIREDICLNSVCYSKMVFNQKFFKNAYYEDILKDIL
                     EAKPLWNGKNMQKTQCGFNQNLNSANYEIFYEICDNKISFVDRISRIKIVLMNFKDKI
                     "
     gene            complement(5169..5660)
                     /locus_tag="ACJE1S_001964"
     CDS             complement(5169..5660)
                     /locus_tag="ACJE1S_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HGG0807472.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIEF
                     SEKDGVFKLHSSSEAKLDVLKDIVISKLIKRGINSSAIKELSRESGAMFRLNLKANDS
                     IDSENAKKINKAIKDSKLKVSSSIRGDEIRVVAKQIDDLQAVMKMVKELNLELNLSFK
                     NLK"
     gene            complement(5650..6585)
                     /locus_tag="ACJE1S_001965"
     CDS             complement(5650..6585)
                     /locus_tag="ACJE1S_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HGG0807473.1"
                     /translation="MKIVCLDAATLGDYDLSIFKNFGEFQSYALTDRKETIERLKDTD
                     VVMTNKVVIDKEVMDACPNLKLILETATGVNNIDVEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFIFAFLNHIPYYDKWSKEGKWCDSPIFTDFGRILNSMEGKKHGIIGLGSIGKEV
                     AKISSAFGAKICYYSTSGLNQNAEFECLNLEELLRTCDIVSIHAPLNEKTKNLLTYEK
                     LKLLKDNAILVNVGRGGIINENDLAKIMDEKNIRVGLDVLESEPMIKNHPLLNIKNKE
                     NLIITPHVAWASKEAVEKLMSMVYDNLKEWIENGK"
     gene            complement(6588..7757)
                     /locus_tag="ACJE1S_001966"
     CDS             complement(6588..7757)
                     /locus_tag="ACJE1S_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HGG0807474.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISDKLVCVSENEAN
                     AYYEAVNELYDMFVAAAQNVIDNNRFDELGIPFNLVDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWAILKQNGMDESKQFNSIYESLMDNFKRLI
                     TLEEDTQGFEEYYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFETDFSFVDEVEFS
                     EEGIFKEGVNYEYWFKLVPWEDIAIEEGELAMLLTQIMRNQKAIILNPAYTLLFQSKG
                     ILKILWELFPNHPLLLETRDVPLEGKDYVKKPVFGREGANISIIKEGKILHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(7767..8372)
                     /locus_tag="ACJE1S_001967"
     CDS             complement(7767..8372)
                     /locus_tag="ACJE1S_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HGG0807475.1"
                     /translation="MKKIKKIIQIGMISGLAAVAGGALVGCGSSNDNSDTLNQAANTQ
                     GAFVIIEEIAPGQYKIKDQFPSDETRVVLKDINGTERVLSKEEMDALIKEEAAKIDNG
                     TSNLTKEGGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTAGSASSASKSGFFGGGSKATSSSSSFGS"
     gene            complement(8575..8787)
                     /gene="rpsU"
                     /locus_tag="ACJE1S_001968"
     CDS             complement(8575..8787)
                     /gene="rpsU"
                     /locus_tag="ACJE1S_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HGG0807476.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            8933..10309
                     /gene="ccoG"
                     /locus_tag="ACJE1S_001969"
     CDS             8933..10309
                     /gene="ccoG"
                     /locus_tag="ACJE1S_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HGG0807477.1"
                     /translation="MENHITNYTKKRYFVYLIATIVIFCLPFITINGNHFFLLSFDHS
                     KLNLFFISFSTQELYLMPFLLIFLFLFIFFITTLGGRVWCAWSCPQTIFRVIYRDIIQ
                     TKLLKIRKNINNKQKEYEGYYFKKIIGVILFYFISLVAVSNLLWYFVPPEDFFAYIQN
                     PGEHLLLLGVLFCASLFLTLDITYLAEKFCIYVCPYARVQSVMFDRDTMQVIYDEKRG
                     GVIYDGHTKLYKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSVKAIETRKKVNYLRFRTIAYFIVLVIALIALMIMGSKKENMLLNIN
                     RSSELYQISHTNNGLEISNAYTFLFQNTDSKAHEYYFEASLEGIDNGIEIIRPSKAFT
                     LKAGEQAKKIVVIKATKKLADNDQKDVIFPLHIKAYAKDNDEIVIFRESIFVYPKSTI
                     LKGYNESK"
     gene            10296..10931
                     /gene="cmeR"
                     /locus_tag="ACJE1S_001970"
     CDS             10296..10931
                     /gene="cmeR"
                     /locus_tag="ACJE1S_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HGG0807478.1"
                     /translation="MNPNKTPSKKVLARREKIKNVAFDLFLTKGFQETSLSDIIKLSG
                     GSYSNIYDSFNSKEGLFFEILDDVCKKHFDLIASQTQTIKDKNLKEFLTSFGLTFVDI
                     FNQVQTVAFGKIIFSQVYDKHKHVKNWIENNQKIFSYSILIELFKKQDSSYISNNAQK
                     LAMLFCAMLREPYHSLNVLADTPLMNKQEQKEHVEFIVNIFLKGIENKTSI"
     gene            11039..12142
                     /locus_tag="ACJE1S_001971"
     CDS             11039..12142
                     /locus_tag="ACJE1S_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HGG0807479.1"
                     /translation="MNLFQKNTLLLLSALFLFSACNKEEAPQKQTLPQSVSTMSAKAE
                     NLPLNFTYPAKLVSDYDVIIKPQVSGVIVEKLFKAGDLIKKGQTLFIIEQDKFKASVN
                     SAYGKALMARANFDNASKDYNRSKTLYNKGAISQKEYDSALANFNNTKANLTSARADL
                     ENARIDLAYTEIKAPFDGIVGDALINIGDYVSSSSTELVRITNLNPIYADFYISDTDK
                     LNIVRNTQDGKWDLSNIYANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            12142..15264
                     /gene="cmeB"
                     /locus_tag="ACJE1S_001972"
     CDS             12142..15264
                     /gene="cmeB"
                     /locus_tag="ACJE1S_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HGG0807480.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAINDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQSPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALNTAKLVEAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFIPVSFISGFVGEIQKQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSIFSAGVAYMLKRTIRFVLIFCIMLGAIFYLYKQVPGSLVPEED
                     QGLMIGIINLPSASALHRTISEVDSMSQEILKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLEDWKDRNVSADEIIMELNKKFAPDRNAASVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDQIQEDVNKLVAAANQREELYGVRTTLDTSFPQYKLIIDRDKLKHFNLNMQDV
                     FSTMNATIGTYYVNDFTMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAISQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTGSYAFALGMVFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKKIFDAAIEAAKLRFRPIVM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            15257..16735
                     /gene="cmeC"
                     /locus_tag="ACJE1S_001973"
     CDS             15257..16735
                     /gene="cmeC"
                     /locus_tag="ACJE1S_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HGG0807481.1"
                     /translation="MNKIISISVIASLSLFISACSLSPNLNIPEANYSLDNKLGALSW
                     EKENNHTLSKEWWKEFDDEKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSDLLP
                     KLDGSASANRAKTPTNAPSNRTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGF
                     KASQYDYEAARLSIVSSVVQTYFNFVNANENEKALKDAYESAQEIYQINYEKFQVGAV
                     GEYEIAQSRANLESTALQYNEAKLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKD
                     FDIPSGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNT
                     LVEAGSRTWSIGGNFVMPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLVAAFGEIRYAL
                     IARKTIRLQYNNAQASELSYKRIYEISKERYDVGEMSLQDYLQARQDWLNATVAFNNT
                     KYSYANSIVNVIKAFGGGFEQGENISKNIEEESKTLDMSFRE"
     gene            complement(16764..17015)
                     /gene="cmeU"
                     /locus_tag="ACJE1S_001974"
     CDS             complement(16764..17015)
                     /gene="cmeU"
                     /locus_tag="ACJE1S_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmeU family protein"
                     /protein_id="HGG0807482.1"
                     /translation="MDKTKVVENLNALFKQRAEFYSYFDKNISKVGNTEVFDFSNAKD
                     LNAEEVYKQFYHLDYAMRKLLPAIYKAYEVSDSDLNRDF"
     gene            17140..18450
                     /locus_tag="ACJE1S_001975"
     CDS             17140..18450
                     /locus_tag="ACJE1S_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HGG0807483.1"
                     /translation="MNLFQNLALKYSHAMMEKSLHKSFNVELLKNPQEKQAKKDKTYM
                     LYAHIPFCHTFCPYCSFHKYYYDEELAKIYFENLRKELMLIKDKGFDFSSMYVGGGTT
                     LINENELLKTLELCKKLFNIKEISCESDPNHIIPEKLSMFKGIIDRLSCGIQSFDDEI
                     LKKIARYNKFGSSKQLQEKISKALGILPIFSLDLIFNFPSQTEEQLLNDLKIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVETKDNEFKYYQMIRNFFKDYQQNNGWSFSLEKNQ
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFDLNDYAKMIQEKQNANIAKASFTRKE
                     IIKYIFLTEMFAGKIQIDKFNQTLNCDLEKELFKELLGLKISNAIKKENGALITSEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDSKRLKNKDFINIMKENISSI"
     gene            complement(18483..18935)
                     /gene="hemJ"
                     /locus_tag="ACJE1S_001976"
     CDS             complement(18483..18935)
                     /gene="hemJ"
                     /locus_tag="ACJE1S_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HGG0807484.1"
                     /translation="MTEWINEYYSWIKWVHYLAFVSWMAGLFYLPRLFVYHAENKNNK
                     GFVDVVKIQERRLYFGIQNPAMIATVISGSLMLHAHKEVLMVGSGFMHAKLTCATLLI
                     IFHIHNYFCLKALANDTSTKSGRYFRIYNEFPTLMFIIIALMMVIRPF"
     gene            complement(18919..19389)
                     /gene="lspA"
                     /locus_tag="ACJE1S_001977"
     CDS             complement(18919..19389)
                     /gene="lspA"
                     /locus_tag="ACJE1S_001977"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HGG0807485.1"
                     /translation="MVKRYKTILIFILVFIAVFAFDQWVKSLTLSGLRWQSEYLDLTY
                     ALNTGVAFSMFSFLEHYLKYLHLALILALVIYLLWQKQFLREHLVAFGMMLGAGCSNL
                     LDRFIHGGVVDMFFWHKWFHFAIFNVADVMINISVALILIKEIFIKKEKNDRMD"
     gene            complement(19382..20719)
                     /gene="glmM"
                     /locus_tag="ACJE1S_001978"
     CDS             complement(19382..20719)
                     /gene="glmM"
                     /locus_tag="ACJE1S_001978"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HGG0807486.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSVTNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYYDDKLIQSSKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALYPSNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALFLKEQGK
                     LKSSVVATIMSNGALKEFLNGHGIELDTCNVGDKYVLEKLKVRGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLCKKKSASTILGQIKPYPQLLTNLKISEKKDLDKIKGLK
                     ELKQDLENKNINVLFRYSGTENLIRLLLEAKDAKILEKEMKNVVEFFKKALNG"
     gene            complement(20815..21840)
                     /locus_tag="ACJE1S_001979"
     CDS             complement(20815..21840)
                     /locus_tag="ACJE1S_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HGG0807487.1"
                     /translation="MKVKSLLIASLVAFSSLNAQSLIEEAKNSGLVALPKDQKGVDEI
                     LKANGVKATEFTLDKVELGKKLYFEPRLSKSGIISCNTCHNLGLGGADGISAAVGHKW
                     TANPHHLNSPTVYNAVLNTTQFWDGRAGTLADQAKGPIESEAEMATPAKLAVEKIASL
                     PEYVKEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDNFLNGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDENGMVKTPTLRNVVETAP
                     YFHNGAIWKLTDAIKEMGSVQLGIQISDKEAKSIETFLKSLTGTKPAVVYPQLPVSTE
                     KTPKPEL"
BASE COUNT         7512 a         3705 c         3068 g         7612 t
ORIGIN      
        1 taaaacaaaa agacttaaat tttttactcg gagtgagaaa caaaattgct cttaaagttc
       61 ataattatat gcaagaatac tccacttctc caaaagattt gagtcttatt tgcttaagag
      121 aacacaaaca tattgaattt tttcagagat tttataaagc cttggcttat tttgtagcct
      181 ttagaaaaaa acttgatgaa gagcaaaaaa ttaaaaattt gatttcaaat atccacgaat
      241 actttggctg tcattttatc aattctgact ttaacaattt acaaaatttt caaaaaaatg
      301 atttctttac actgcctgaa aaatgtcttc aatattttca tcttgctatg attcatcttt
      361 gttttatggt tttaaatcct ttaaatttta aggattctaa tcgacacctt gataaagcaa
      421 ttaactatct tatcgatgga acttttgaaa tttatgagct catctttaaa gaatattttc
      481 tattatttcc aaaggatgaa gagcttaaag atgaacttaa aaaaataaaa aatttagaat
      541 ttaaaattct aatgcaagaa gtttcaagag ttaaactact caatcattat aaagaatttt
      601 gtgaagaaat attttacaat atagagcttg aaaaaatcat ataaaattaa tcctatatta
      661 acattgttat agtttaataa taaaaatttt taataaggaa aaattatgat tgtaacgcct
      721 gagaaacttt ataaacaaag aagagatttt tttaaacttg gagcaggagc tttaatcggc
      781 tcttctttaa ttgtttccaa actttctgct ttaaatttta taaatgatac aaatgcaaat
      841 aaacttgaaa ttagcaatga agaacttgca acaaactata tcaattttta tgaattttca
      901 acggataaaa gaaaggcagt atctttagcg caaaatttta atactcaaaa ttggaaaatc
      961 gatataagcg gggaaataga aaagcctttc actcttagca tggaggatat tttaaaattt
     1021 cctttagaag aaagaattta tcgttttcgc tgtgttgaaa cttggtctat ggtagtgcct
     1081 tgggtgggtt ttgaactacg ccgtttaatc gatatggcaa aaccaactag cgaggcaaaa
     1141 ttcattaaat ttaccactct tttggataaa aaccaattcc ccgatcaaga tgctttgttt
     1201 ccaactgttg agtatcctta tgtggaaggc ttacgtatgg atgaggctat gcatccactc
     1261 actctacttg cagtgggtat gtataaaaag gctttaaaac cacaaaatgg agcaccaatc
     1321 cgccttgttg taccttggaa atatggattt aaaagtatta aatccatagt taaaatcgaa
     1381 tttgtaaaag agcagcctat tggcacttgg gaaaaatatg ctccaaatga atatggcttt
     1441 tatgccaatg tcaaccctaa tgtatcccat cctagatggt cgcaagctaa cgaaagggct
     1501 ttaggagact tttttaccaa acctacttta atgtttaatg gctatgaaaa agaagtagca
     1561 agtctttatg cgggcatgga tttaaaggca aattattaat gcgcactaaa tactttaaat
     1621 ttcttgccta ttttgctttt ttagcaagct tgatttatgg cttttatcat atattaaaag
     1681 cctttgattt tgtcaaagag gcttatattt atacaggagt ttttgcttta ttttttttaa
     1741 atttaagcct tttgttttct ttatgcaaat ttaaaaaaac caaaagctat cctaagctac
     1801 taggaatatt tgctgcattt tgggcatttt tacatttttt aaattatttt atctttgata
     1861 gaaatgcaaa ttttttaaga ctttttgatg atatctctca tcgtttattg gaagcgagtg
     1921 gtttttttgc ttttatcatc atctttttta tgtttttaag ctcttttaga ttttttaaaa
     1981 gaattgaaaa gataagaaag ttaggttatg tatgcttggt tttagcaagt tatcattatt
     2041 ttttaagccc taaagttcct atgttttggg aatggagtgc tttgatgctt agccttgttt
     2101 attttatgat acgctattta aaatttttca aatttaaaaa agcttaaaaa ccgacaattt
     2161 tgcttttatc aaaactagaa tttaattctt tttgtatact ctctataaaa tcttgcattt
     2221 taaatactcc atcttcagtc acagctacct tcaaagcagt atttttaaca accattaaaa
     2281 tttgcgctcc acttaattcg taatttgcta aaagattaac atcaaatgct ttttcaaagg
     2341 atgcttttct aggtaaaaat ttctcccaca ttttaagcct atctttaaaa tcaggctttt
     2401 taaattcaat cttataatca aatcttctcg aaaaagcact gtctaaactt tctaaaaagt
     2461 tagttgtagc aatgataaca ccattaaaac gctcaatttg ctctaaaaaa atattttgca
     2521 tttgattatg catcttatca cttccgctac tgctttcaac ccttgtgctt aaaaactgat
     2581 cagcttcatt taaaagcaat ataggacttt gtttgcaagt ttgaactatg tttttgtaag
     2641 tatcaaaaat tttccttaca ttttgttcgc tctcacccac ccatttactt aaaattttag
     2701 aacaatcaaa gctaagcact gtttttttca tcgattttgc catagctagg gctgacatcg
     2761 ttttccccgt tccagcaggt ccataaaaaa taatctttgc ttctatattt ttattgctct
     2821 ttatccccca agaatttagc ctttcaagta cttttttatc ttgttgtttt aagatatttt
     2881 ccaaaagctc tttagtattt tgaggcatga taatatcatt tatatctata cttggctcta
     2941 taagctcaaa aatatcttgc tcttttaaaa cattttcgat tttaattttt ttattttgtt
     3001 ttggctcgaa atttataatt ctttgtaaaa tttcatctgt aataaaaaaa ctcttagaaa
     3061 tatcaccaaa ggcatttaag tattcatcat attctattaa attaagaaga ggagcatttt
     3121 cttgcaataa acttttattt ttatgctttt ctaaatcatt ttcactgact aaagaaagta
     3181 aagaattcat ctctctagat actgagtttt cattgcttag tgtatattct tctttaagaa
     3241 gagctagaaa aataatctgc tctttatact caagactata ctctttaaaa atatctgcta
     3301 aaatattata aaatttactt ttcttaagtc tttctttaat atgtttttca taaagcttga
     3361 tttgtgcttt aagttcgtca ctatatgtgc ttgaacgtat aaaactcaat ctctcataca
     3421 gttcaactcg cataaattca tcttttaaat attctaaata ctctccataa gcttcttttt
     3481 tatccaaatt taaacgaggc ttggcttcta aaaattctaa aaaatactca cttaaactca
     3541 actcgctttg caataaacta agaattaaat tttggctttt attgctttct atatttttaa
     3601 aaaagccaga attttgattt acaaaacctc tttcaataag cctttttaaa tcctctaaag
     3661 tatctaaata cgaatatttt tcactaccaa aaattcctgt caataaagta aaagcattga
     3721 tagaagatat ggaaatgaca taatttttac aaagttctct caaaatcaaa gcttcattct
     3781 ttgaacactt taattcttta taaatttgac tttcttctat atttttaaga cttaaaaatt
     3841 cctttagcct gaccatttta ttttctaaat tcctttatct cattctcgtt aaaatcaaca
     3901 caaatatttt cattcaaata atgattttca taaggaagat agcacaatct taaacccaaa
     3961 tttgtaatta aaaagttatt attaaaaaaa acttgctcca tatcatcaaa acattcatcg
     4021 caaacaagat tcagtttttg atgcaagagt tctttaaatt tcaaattatc cacatcataa
     4081 agctcattta aacttaaaaa aactttttta tccatatcga aaacaaaatt attaagctct
     4141 aaaattgcgc gattatcctc ttcataaaaa taataccatt cttcaaaact aagctttcca
     4201 tcttttagta cgataggctt ttggcgaatt tgttcaaaac taacaatgtc gttatacata
     4261 ggacgaaatt gtctgatctc atcttgatgg gctaaaaaat caagactgcg tttgattctt
     4321 atattgtttt gctctttgat aagttcaaga gttgttgttc ctagtttatt tccttgaatt
     4381 tttttattat caaataccag ttctttagaa gaagaaattt tatatttttt ttctccatcc
     4441 tcccatgaat ttgctgtttg aaacaaagct atctcgatat ttgtatcaag atcgctcagt
     4501 attaaaaaac tagaactagt ttgattaaca tccctatcaa aaatgggtac aaaaggagca
     4561 ttatcataaa ctatagcaaa aacctgctta tcttttaagt cataaaaata aatttcaccc
     4621 ttataaattt gcgcacaaac caaactcaca aaaaagcata acaacagccc tattttcaaa
     4681 ttttatcctt aaaattcatt aaaacaattt ttatacgcga aattctatca acaaaactga
     4741 ttttattatc acaaatttca tagaaaattt cataatttgc gctgtttaaa ttctgattga
     4801 atccgcattg agttttttgc atattcttac cattccacaa aggctttgct tccaaaatat
     4861 cttttaatat atcttcataa taggcatttt taaaaaattt ttgattaaat accattttgc
     4921 tatagcacac cgaatttaaa caaatatcct ctctgatttt aagtttaaaa aaagcttgtc
     4981 caagtttata aacttctaaa tttaaagcct tattttcttt ttttaaaaag ccaaaatcgt
     5041 tgattttaat agttggtgtg ctaaatacaa ccttcatttt ttggctagaa taatcttgat
     5101 tttttaaagc acaagcacta aaaaacaaaa ttaaaaaaaa gataaaaatt tttctcaaca
     5161 ctcttaacct attttaaatt tttaaaacta agatttaatt ctaaattaag ctctttaacc
     5221 attttcatca cagcttgcaa atcatcaatt tgctttgcaa ctacacgaat ttcatctcct
     5281 cgtatagaag agcttacttt tagcttacta tctttaatag ccttattgat tttcttagca
     5341 ttttcactat caatgctatc attggctttt aaatttaaac gaaacatcgc tccactttcg
     5401 cgcgaaagct ctttaatagc acttgaatta atacctcttt tgataagttt tgaaatcaca
     5461 atatctttta gaacatcaag ctttgcctca cttgaagaat gaagtttaaa aacaccatct
     5521 ttctcgctaa attcaatttc acacttaata ccttttaaat catagcgaga atcaagctct
     5581 ttttttgctt gctcaaaagc atttttaagc tcttgtttat ccaaagccgc tgaaatatca
     5641 aaactatgtt cacttgccat tttctatcca ttcttttaaa ttatcataaa ccatagacat
     5701 caatttttcc accgcttctt tgcttgccca agccacatgt ggagtaatga tgagattttc
     5761 tttatttttg atatttaaga gaggatgatt ttttatcata ggttcactct ctaaaacatc
     5821 aagtcctacg cgtatatttt tttcatccat tatttttgcc aaatcattct cattaatgat
     5881 tccgcccctg cctacattga ccaaaatcgc attatctttt aaaagtttta acttctcata
     5941 agtaagcaaa tttttcgttt tttcatttaa aggagcgtga atgctaacaa tatcgcaagt
     6001 tcttaaaagc tcttccaaat ttaagcattc aaattcggca ttttgattga gtccgcttgt
     6061 tgaataataa caaattttag ccccaaaagc actagaaatt ttagccactt ctttacctat
     6121 actgcccagt cctataatac cgtgcttttt tccttccatt gaatttaaaa ttctaccaaa
     6181 atctgtaaag atagggctat cgcaccattt gccctcttta ctccatttat catagtaagg
     6241 aatatgattt aaaaaagcaa aaataaatgc aaaagtatgc tgaactacgc tcatagtaga
     6301 atatccagca gcatttttaa cgataatgcc cttttcttta gcatattcaa catcgatatt
     6361 atttacaccc gtagctgttt ctaaaataag ctttaaatta gggcaagcat ccataacttc
     6421 tttatcaata acaactttat ttgtcataac cacatccgta tcttttaaac gctctatggt
     6481 ttcttttcta tctgttaaag cataactttg aaattctcca aaattcttaa aaatacttaa
     6541 atcataatcc cctaaagttg ccgcatctaa acaaacaatt ttcatttcta atcctttata
     6601 atatgtccta caaatttaga ataattatca agcacaagtc ctccttttct aaatcctaag
     6661 ccacaccctt cataagcaaa gaaaacacct gcttgatagt attcgttttc acatgaatta
     6721 aactctacat attcttgata aatagcctta ttattcccat aaggacctac attctcatgt
     6781 aaaattttac cttctttgat tatactaata tttgcccctt ctctaccaaa aacaggtttt
     6841 ttcacataat cttttccctc taaaggaaca tctcgtgttt ctaaaagtaa tggatgattt
     6901 gggaaaagtt cccataaaat ttttaaaatt cccttagatt gaaataaaag cgtataagca
     6961 ggatttaaaa taatagcttt ttgatttctc atgatttgcg ttaaaagcat ggctagttcg
     7021 ccctcttcta tggctatatc ttcccaagga acgagcttaa accaatattc ataatttaca
     7081 ccctctttaa aaattccctc ttcgctaaat tctacctcat ctacaaaaga aaaatctgtt
     7141 tcaaatcctg cttcatttgc aatatgagca agtaattttg tagtgatttc ttcctcttta
     7201 cttcctgcca cacttgaaaa aagaattttc catccttgat aatattcttc aaagccttga
     7261 gtatcctctt caagggtaat caatctttta aaattatcca tcaagctttc ataaatgcta
     7321 ttaaattgct tactttcatc catgccattt tgctttaaaa tcgcccattg taaaatcgca
     7381 ctttcaaaaa gagcagtggg ggtatctgca ttaaattcta taagctttat aggcttgcca
     7441 tcaagtccac ccgctaaatc aaaacggcca tataaatgcc aatgaacctc attttcccaa
     7501 ctcattttaa tagcatcaac aagattaaaa gggattccaa gctcatcaaa acgattatta
     7561 tctataacat tttgtgctgc agctacaaac atatcataaa gctcattgac tgcctcataa
     7621 taagcattgg cttcattttc acttacacat actaatttat cacttatata atcacttcca
     7681 tcttcatctg tatgccaaga aaaacctata ttttctaaat aatctttttg aagtttgtct
     7741 acttgtagta attgcattat ttatccttaa gagccaaaag aagaactaga acttgtggct
     7801 ttagagcctc caccaaaaaa acctgatttt gaagcacttg aggcagagcc tgctgtgcct
     7861 gccttgttaa aactattaac acttctttga taagcacttt gatttgaaaa agcgcctcgt
     7921 tgttgattgg caaaattttg attattaaag agcttagagc ctatccagct acccaaaatt
     7981 gcacccgcag cacttgcaag taaggtctct cctaagctta atcctccact gctgatttga
     8041 ccgccctctt tagtcaaatt tgaagttcca ttatcaatct tagctgcttc ttctttgatg
     8101 agcgcatcca tttcctcttt gcttagcact ctttccgtgc cattgatatc ttttaaaaca
     8161 actctagttt catcacttgg aaattgatct ttgattttat attgacctgg ggcgatttct
     8221 tcaatgataa caaaggctcc ttgagtgttt gctgcttgat ttaaagtatc actattatca
     8281 ttgctacttc cacatcctac caaagctcca cctgcaacag ctgcaaggcc gcttatcata
     8341 ccgatttgaa taattttttt aatttttttc atagtcttga tcctcaaatg agatttagaa
     8401 tttatttttt gataaaattc taacaaaaaa taatcaatta aatcttacaa aaatgaaaat
     8461 attttaaaga aataaaatgc aatcttaata tatataaaat aaaactagga ttttaaaaaa
     8521 ggtaattttg caaagaaatc ttaaattaag aaaaaagccc tttcgggctt tgggttaaag
     8581 tcttgactcg tagcgtctaa gcatataaag tcttttaagc atttttttgc gagctgaaat
     8641 tttttgtttt ttacgaattt cagtcatagg ctcaaaaaat cttctcgctc ttacttcagt
     8701 aacaactaga tttctatcta cttgtttttt gaacttacga tacgcttcgt caaaagactc
     8761 gttaggatgt accttaattc ctggcactat cctcaccacc tttctgtgta aatttttgtt
     8821 gtgaattatg attatagaat atttcttatt aatccaaact tagaaagcat ttaaaaattg
     8881 ttttagtttt ttgggctata atcgtaatta ctaatttttt acgaggtttt tcatggaaaa
     8941 tcacatcacc aactatacta aaaagcgtta ttttgtatat ctaattgcaa caattgtaat
     9001 attttgttta ccttttatta caattaatgg caaccatttc tttttattga gctttgatca
     9061 ttctaagttg aatctatttt ttatttcatt ttcaactcaa gaattatatc ttatgccttt
     9121 tttgcttatt tttctttttt tatttatatt ttttataacc actttaggag gaagagtttg
     9181 gtgtgcttgg agctgtcctc aaactatttt tagagtgatt tatagagata ttatccagac
     9241 taaactttta aaaattcgta aaaatattaa caataaacaa aaagaatatg aaggatatta
     9301 ttttaaaaaa atcatagggg tgattttatt ttatttcata tctttagtcg ctgtaagtaa
     9361 tttgctttgg tattttgttc cgcctgaaga tttttttgct tatatacaaa atccaggaga
     9421 acacttactt ttattgggtg ttttattttg cgcaagtttg tttttaactt tagatattac
     9481 ctatttagca gaaaaatttt gtatttatgt atgtccttac gcaagagttc aatctgtaat
     9541 gtttgaccgc gataccatgc aagttattta tgatgaaaaa cgcgggggag tgatttatga
     9601 tggacatacc aaactttaca aaaaaccgcc tgagggtgaa tgtataggtt gtgaagcctg
     9661 tgtaagcatt tgtcctactc atatagatat acgcaagggt atgcaacttg aatgtatcaa
     9721 ttgtttagaa tgtgctgatg cctgttctaa agtgcaaagc aaatttaata gaccaagttt
     9781 gattaattgg accagtgtaa aggccataga aacacgcaaa aaagtaaatt atctccgctt
     9841 tagaaccatt gcttatttta ttgttcttgt gattgcttta attgctttaa tgattatggg
     9901 tagtaaaaaa gaaaatatgc ttttaaatat caatcgtagc agtgaacttt atcaaatttc
     9961 gcatactaat aatggtttag aaatttcaaa tgcttatact tttttgtttc aaaatactga
    10021 ttctaaagct catgaatatt attttgaagc tagcctagaa ggcattgata atggcataga
    10081 aatcattcgt ccaagtaaag cttttacatt aaaagcagga gagcaagcta agaaaattgt
    10141 tgtaataaaa gctactaaaa agctagcaga taatgatcaa aaagatgtga tttttccact
    10201 tcacatcaag gcctatgcca aagataatga tgagattgtc atttttagag aaagtatttt
    10261 tgtttatcct aaaagcacaa ttttaaaggg gtataatgaa tccaaataaa acaccttcta
    10321 aaaaagtttt agcaagaaga gaaaagatta aaaatgttgc ttttgatcta tttttaacca
    10381 agggttttca agaaaccagt ttaagcgata ttatcaaact atcgggcggt tcgtattcta
    10441 atatttatga tagttttaat agcaaagaag gtttattttt tgaaatttta gatgatgttt
    10501 gcaaaaaaca ttttgaccta atagcctctc aaactcaaac tattaaagat aaaaatttaa
    10561 aagaattttt aacctctttt ggacttactt ttgttgatat tttcaatcaa gtccaaaccg
    10621 tcgcctttgg caaaattatt ttctctcaag tttatgataa acataagcat gttaaaaatt
    10681 ggattgaaaa caatcagaaa attttctcct atagcatact tatagaactt tttaaaaagc
    10741 aagatagcag ctatatttca aacaatgccc aaaaacttgc catgcttttt tgcgccatgt
    10801 taagagaacc ttatcatagt ttaaatgttt tagccgatac tcctttaatg aacaaacaag
    10861 aacaaaaaga acatgtggaa tttattgtca atatattttt aaaaggaatt gaaaataaaa
    10921 cctcaattta attaagtaaa tataaaaatt attaaccaaa tttgagctat aatatgtctt
    10981 aaatatattg taataaatat tacaatatat ttaaattaaa aatcttaagg caaaaatcat
    11041 gaatttgttt caaaaaaata cccttttact cttaagtgct ttatttttat tttctgcttg
    11101 taacaaagaa gaagcacctc aaaaacaaac actccctcaa tccgttagca caatgagtgc
    11161 taaagctgaa aatttaccgc ttaactttac ttatcctgca aaacttgtta gtgattatga
    11221 tgttatcatc aaacctcaag taagcggtgt tatcgtggag aaacttttca aagcgggtga
    11281 tttaattaaa aaaggacaaa cacttttcat tatcgaacaa gataaattta aagcaagtgt
    11341 aaattcagct tatggaaaag ctttaatggc tagagcaaat tttgacaatg ccagcaaaga
    11401 ttataaccgt tcaaaaactc tttataataa aggagcaatc tctcaaaaag aatatgatag
    11461 cgccttagca aattttaaca acacaaaagc aaatctcacc agtgctagag cagacttaga
    11521 aaatgcacgc attgatttag cttatactga aattaaagct ccttttgatg gtattgtagg
    11581 agatgctttg attaatatag gagattatgt tagctcctct tcaactgaac tcgtaagaat
    11641 tacaaacctc aatccaatct atgctgattt ttacatttca gatacggata aactcaatat
    11701 cgttcgcaat actcaagatg gaaaatggga tttaagcaat atctatgcaa atttaaatct
    11761 taatggagaa accgttcaag gcaaacttta ttttattgat tctgttatag atgctaatag
    11821 tggaacagta aaagccaaag ctatatttga caacaacaac tcaacacttt taccaggtgc
    11881 ttttgcaaca attacttcag aaggttttat acaaaaaaat ggctttaaag tgcctcaaat
    11941 agctgttaaa caaaatcaaa atgatgttta tgttcttctt gttaaaaatg gaaaagtaga
    12001 aaaatcttct gtacatataa gctaccaaaa caatgaatat gccattattg acaaaggatt
    12061 acaaaatggc gataaaatca ttttagataa ctttaaaaaa attcaagttg gtagcgaagt
    12121 taaagaaatt ggagcacaat aatgttttct aaatttttta tcgaaagacc tgtttttgct
    12181 tcagttgttg caattatcat ttctttagct ggagctatag gtcttacaaa tttacctata
    12241 gagcagtatc catctttaac ccctcctaca gttaaagtaa gtgcaactta cacaggagct
    12301 gatgcacaaa ccattgcttc aacagttgca agtcctatcg aagatgcaat caatggcgca
    12361 gataatatga tttacatgga ttcaacttca agttcttcag gaactatgag tttgactgtt
    12421 tattttgata tcggtacaga tcctgatcaa gccaccatag atgttaataa tagaatttca
    12481 gccgcaactg caaaaatgcc agatgcagtt aaaaaacttg gagtaacagt tagaaaaact
    12541 tcctcagcaa cacttgctgc aatttctatg tattcaagtg atggctcaat gagtgcagta
    12601 gatgtatata actatatcac tttaaatgtt ttagatgagt taaaaagggt tccaggagtt
    12661 ggagatgcaa acgctatagg aaatcgtaat tattctttaa gaatttggct caagcctgat
    12721 ttattaaata aatttggaat cacagctact gatgtaattt ctgcgattaa tgaccaaaat
    12781 gcccaatacg caactggtaa aattggcgaa gaacctgtaa cccaaaaatc accctatgtt
    12841 tattctatca ccatgcaagg aagattgcaa agcccgagtg aatttgaaaa cattatttta
    12901 agaacaaata atgatggatc atttttaaga cttaaagatg tagctgatgt ggaaatagga
    12961 tcacaacaat acagctcaca aggacgatta aatggcaatg atgcagttcc aattatgatc
    13021 aatcttcaat caggagcaaa tgcactcaat acagcaaaac ttgtagaagc taaaatgcaa
    13081 gaactttcaa aaaattttcc aaaaggttta acatataaaa ttccttacga tacaacaaaa
    13141 tttgtaatag aatcaatcaa agaagttgtt aaaacttttg ttgaagctct aattttagtt
    13201 atcattgtta tgtatatgtt cttaaagaat ttccgtgcaa cacttattcc tatgatagct
    13261 gtacctgttt cattgttagg aacttttgct ggactttatg ttttaggttt tagtattaac
    13321 ttgctcacgc tttttgcttt aattttagcc atagggattg ttgtagatga tgcgattata
    13381 gttgtagaaa atattgatag gattttacat gaaaatgagc aaataagcgt aaaagatgct
    13441 gctatccaag cgatgcaaga agttagctca cctgtaattt caattgttct tgtgctttgt
    13501 gctgttttta tacctgtgtc ttttatttca ggctttgtgg gagaaattca aaaacaattt
    13561 gcgctcactt tggctatatc tgtaaccata tcaggttttg tagctcttac cttaacacct
    13621 tctttatgtg cactcttttt gcgacgtaat gaaggagagc catttaaatt tgtaaagaaa
    13681 tttaatgatt tctttgactg gagcacttct atatttagtg caggcgttgc ttatatgctt
    13741 aaaagaacca ttcgttttgt tttgattttc tgtatcatgc tcggagcaat tttttatctt
    13801 tataaacaag ttcctggctc tttggttcct gaagaagatc aaggtttaat gataggtatt
    13861 atcaaccttc cttcggcttc agctctacat agaacgatct cggaagttga ctctatgagt
    13921 caagaaattc taaaaaccaa tggcgtaaaa gatgctatgg ctatgatagg ttttgattta
    13981 tttacaagct cacttaaaga aaatgccgct gcaatgttta tagggcttga agattggaaa
    14041 gatagaaatg taagcgctga tgaaatcatc atggagctta ataaaaaatt tgcccctgat
    14101 cgcaatgctg caagtgtatt tataggctta cctcctatac ctgggctaag tatcacgggt
    14161 ggttttgaaa tgtatgtgca aaataaaagc ggaaaaagct acgatcaaat tcaagaagat
    14221 gtaaataaac ttgtagcagc agccaatcaa agagaggaat tatatggggt tcgaactact
    14281 cttgatacga gctttcctca atataaactc atcattgata gagataaact aaagcatttt
    14341 aatttaaata tgcaagatgt tttcagtaca atgaatgcaa ccattggaac atattatgtt
    14401 aatgatttta ctatgctagg taaaaatttc caagtaaata tccgcgcaaa aggtgatttt
    14461 agaaatacac aagatgcgtt aaaaaatatt tttgtaagat caaatgatgg aaaaatgata
    14521 ccacttgact ctttcttaac tctacaaaga agttcagggc ctgatgatgt aaaacgattc
    14581 aaccttttcc cagcagcaca agttcaaggt caacccgcac caggttatac ttcaggccaa
    14641 gccatagaag cgatttccca agtagcaaaa gaaactttag gggatgatta ctctatagct
    14701 tggagtggtt cagcctatca agaagtttca agcaagggaa cagggagcta tgcctttgct
    14761 ttgggtatgg tgtttgtatt cttaatccta gcagcacaat atgaaagatg gcttatacct
    14821 ttagctgttg ttacagctgt accttttgcc gtttttggtt cgtttttact tgtatactta
    14881 agaggattta ctaatgatat atattttcaa accggactct tacttttaat tggactttca
    14941 gctaagaatg ctattttgat cgttgaattt gctatggaag aacgctttaa gaaaggtaag
    15001 aaaatatttg atgcagctat cgaagctgca aaacttcgct ttaggccgat agttatgact
    15061 tctttagctt ttacttttgg ggttttacca atgatttttg caactggagc aggaagtgct
    15121 tcaagacatt ctttagggac agggcttatt ggtggaatga tagctgcttc tactttagct
    15181 atattctttg tacctttatt tttctatctt ttagaaaatt tcaacgaatg gctagataag
    15241 aaaaggggta aagttcatga ataaaataat ttcaataagt gttatagcaa gcttaagcct
    15301 ttttatttca gcttgttctt taagtccaaa tttaaatatc ccagaagcaa attatagtct
    15361 tgataataaa ctgggcgccc tatcttggga aaaagaaaac aatcatactc tttctaaaga
    15421 atggtggaaa gaatttgatg atgagaaatt aaatcacgta gttgatttag ctcttcagaa
    15481 caataatgat ttaaaacttg cttttattca tatggaacaa gctgctgccc aattaggcat
    15541 agattttagt gatttattac caaaattaga tggtagcgct agtgcaaatc gtgcaaaaac
    15601 acctacaaat gctccaagca accgcactgg gggagtaagc tatggcaatg attttaaaat
    15661 gggactggat ttaagctatg aaattgatct ttggggaaga taccgcgata cttatcgcgc
    15721 ttcaagatca ggctttaaag ccagtcagta tgattatgaa gctgcgagac tttctatagt
    15781 ttcaagcgtg gttcagactt attttaattt tgtaaatgca aatgaaaatg aaaaagcttt
    15841 aaaagatgct tatgaatctg cacaagaaat ttatcaaatt aattatgaaa aatttcaagt
    15901 aggagcagta ggagaatacg aaatcgcgca atcaagagca aatttagaaa gtactgcttt
    15961 acaatacaat gaagcaaaat taaataaaga aaactatctt aaagctttaa aaattctaac
    16021 ttcaaatgat ttaaacgata ttctttatca agatcaagct tatcaggttt ttaaactcaa
    16081 agattttgat ataccgagcg gaatttcaag cactatactc ttgcagcgtc ctgatattgg
    16141 atcttcttta gaaaaactta ctcaacaaaa ttatctagta ggagtagctc gcacagcttt
    16201 cttgcctaat ctttctttaa caggcttatt aggatttgaa agcggggatt taaatacact
    16261 tgtggaagcg ggctctagga cttggagtat aggtgggaat ttcgtaatgc caattttcca
    16321 ctggggagaa atttatcaaa atgtgaattt agcaaaactc aacaaagatg aagcttttgt
    16381 aaattatcaa aataccttag ttgcagcttt tggagaaatt cgctatgctt taattgcaag
    16441 aaagactatt cgcttgcaat acaataacgc acaagcaagc gaattatcct acaaaagaat
    16501 ttatgaaata agtaaagagc gttatgatgt gggcgaaatg tctttgcaag actatctaca
    16561 agcgcgtcaa gactggttaa atgctacagt tgcttttaat aataccaaat attcttatgc
    16621 taattctata gtcaatgtta tcaaagcttt tggtggcgga tttgaacaag gtgaaaatat
    16681 cagcaaaaat atagaagaag aatcaaaaac tttagatatg tcctttagag agtaaaactt
    16741 actctctaaa ttagagctta tttttaaaaa tctctattta aatcagaatc gctaacctca
    16801 tatgctttat aaatagctgg taataatttt ctcatcgcat aatctaaatg ataaaattgc
    16861 ttataaactt cctctgcatt taagtcctta gcattgctaa agtcaaatac ttcagtattg
    16921 ccaacttttg aaatattctt atcaaaataa gaataaaatt ccgccctttg tttaaacaat
    16981 gcgtttaaat tttctactac ttttgtttta tccataagcc atcctttcta attattttga
    17041 aagttatagc atttttttgc taaaaataaa aaaaatttac acttgattta ataaaaaatt
    17101 gataaagtta tattatattt tctactttaa ggtgggttaa tgaatttatt tcaaaatttg
    17161 gctttaaaat attctcatgc tatgatggaa aaatctctac ataaaagttt caatgtcgaa
    17221 cttttgaaaa atcctcaaga aaaacaagcc aaaaaagata aaacttatat gctttatgct
    17281 cacataccct tttgccatac cttttgtcct tattgtagtt ttcataaata ctattatgat
    17341 gaggaattgg ctaaaattta ttttgaaaat ttaagaaaag agcttatgct tataaaagat
    17401 aaaggttttg attttagctc aatgtatgta gggggcggaa caacattgat taatgaaaat
    17461 gaattactaa aaactctaga actttgtaaa aaacttttca atatcaaaga aatttcttgc
    17521 gaaagcgatc ctaatcatat aattcctgaa aaactctcta tgtttaaagg tataatcgat
    17581 cgtttaagct gtggaattca aagttttgat gatgaaattt taaaaaaaat agcaagatat
    17641 aataaatttg gttcttctaa acaattacaa gaaaaaattt caaaagcttt gggaattttg
    17701 ccaattttta gccttgattt aatttttaat ttcccctcac aaacagaaga acagctttta
    17761 aatgatttaa aaatcgctaa aaatttagct cctcaacaaa tcacaaccta tcctttaatg
    17821 aaatccaatc taaccaaaga caatatagcc aaaagtcttg gtgttgaaac taaagataat
    17881 gaatttaaat actatcaaat gatacgaaat tttttcaagg attatcagca aaataatggc
    17941 tggagttttt ctttagaaaa aaatcaactc aatgatgaat atgtaagctc tcaccatgaa
    18001 tatttaggcg ttggaagtgg agcttttagc tttttagatg gggagttgct tatcaatgct
    18061 tttgatttaa atgattatgc aaagatgata caagaaaaac aaaatgccaa tatagcaaaa
    18121 gcgagtttta cacgaaaaga gattatcaaa tacatatttt taactgaaat gtttgcaggg
    18181 aaaatacaaa ttgataaatt caatcaaacc cttaattgtg atcttgaaaa agaactcttc
    18241 aaagaacttt taggacttaa aataagcaat gctatcaaaa aagaaaatgg cgccttaatc
    18301 acaagtgaat ttggacagta tctctttgtg gtcttaatga aggattttta cacaggaatg
    18361 gatcttgtgc gcgcggtatt tagagatagt aagcgcttaa aaaataaaga ttttatcaat
    18421 ataatgaaag aaaatataag ttctatttaa tttctttttt tgaaattaaa tagaaatgaa
    18481 aattaaaacg gacgaatcac catcattaaa gcaatgataa taaacattaa agtaggaaat
    18541 tcattataaa ttctaaaata tcttccgctt tttgtagaag tatcattcgc caaagctttt
    18601 aagcaaaaat aattatgtat atgaaaaatg attaaaagcg tagcacaggt aagttttgca
    18661 tgcataaagc cagaacccac catcaaaact tctttatgag catgtaacat taaactccca
    18721 ctaataaccg ttgctatcat cgctggattt tgtataccaa aataaagtct tctttcttgt
    18781 atctttacaa catcaacaaa acctttattg tttttatttt ctgcatgata tacaaacaaa
    18841 cgaggcaaat aaaaaagtcc tgccatccaa gaaacaaatg ctaaataatg cacccattta
    18901 atccaagaat aatactcatt aatccattct gtcatttttt tcctttttta taaaaatttc
    18961 ttttattaag attaaggcaa cgcttatgtt tatcatcaca tctgctacat taaaaatagc
    19021 aaaatgaaac catttatgcc aaaaaaacat atccactact cccccgtgta taaaacggtc
    19081 aagcaaattc gaacaccccg cccctagcat cataccaaaa gccactaaat gttctcttaa
    19141 gaattgtttt tgccacaaaa ggtatataac aagcgccaat atcaaggcta aatgtaaata
    19201 ttttaaataa tgctctaaaa aactaaacat agaaaaagca actcctgtgt ttagagcata
    19261 agttaaatcc aaatactcac tttgccaacg caaacccgat aaagttaaag attttaccca
    19321 ctgatcaaaa gcaaaaactg caataaaaac taaaatgaag atcaagatag ttttatatct
    19381 tttaaccatt taatgctttc ttgaaaaatt caactacatt tttcatttct ttttctaaaa
    19441 ttttagcatc tttagcttct agtaaaagtc tgatcaaatt ttctgttcca gaatagcgaa
    19501 ataacacatt aatattttta ttttccaaat cttgttttaa ttccttcaaa cctttaattt
    19561 tatccaaatc ttttttttct gaaattttaa gattggttaa aagttgagga taaggtttga
    19621 tttgtcctaa aatagtactt gcggactttt tcttgcaaag catcaaagca ctaaattgca
    19681 aagctgctat aagaccatcg cctgtttttg cataatcgct aaaaataata tgcccacttt
    19741 gctctccgcc aaagtttcca cccctaactt ttaatttctc aagtacatat ttatcgccta
    19801 cattacaagt atcgagctct ataccatgtc catttaaaaa ttctttcaaa gccccattgc
    19861 tcatgatagt agctaccaca ctggatttta atttgccctg ttcttttaag aaaagagcta
    19921 aaactccaag caggctatct ccatttgcta cttcaccctt ttcatctacc actaccaaac
    19981 gatccgcatc tccatcaaaa gcaaaaccaa catctgcacg caaacgcttt acttcagcgg
    20041 ctaaatttga aggatacaag gctccacaat tttcattgat attaagccca ttaggtttat
    20101 cactcatcac tataacttca gctcccagtt ctttaaaaac agtcggagct accttataag
    20161 ccgctccatg agctacatct aaaactacac gcaatgattt tagagttaaa tccttaggga
    20221 aggaattctt aatagaaaca atatatcttc ctataacatc atcaattctt ttagcctggc
    20281 caattttctc catatcaact ttagagcttt ggataagctt atcatcataa taaatttctt
    20341 caatcttttt ttctatatct tcgctaagct tattcccatg tgcatcaaaa aatttaatcc
    20401 cgttatcata ataaggattg tgtgaagctg aaatcataat acccgcatca caacgcatat
    20461 cttcagttaa aaatgcaatt gcaggtgttg gcatagggcc tatttgtatc acattatatc
    20521 ctatagaagt aagacctgaa acaatagcat tttctatcat ataaccactt cttcttgtat
    20581 ctttacctac taaaatatta tttgtaacac tcttatcttt aaaataaatt ccagcggcca
    20641 tagcaagacg catagctaaa aaactatcta aaaattcgcc cgcttttcca cgaacgccat
    20701 ctgtcccaaa aagtttcatc attaaacctt tctcaatgaa attctagaaa ttatagcaaa
    20761 gctaggataa agaaatttaa acaaacccta aaaagattta gggtttgata agccttatag
    20821 ttcaggcttt ggagtttttt ctgtagaaac agggagttga ggataaacca ctgctggttt
    20881 agttccagtt aaagatttta agaaagtttc tatacttttt gcctctttat cagaaatttg
    20941 aatgccaagt tgcacactac ccatttcttt aattgcatcg gttaatttcc atatcgcacc
    21001 attgtggaaa tatggagctg tctcaactac atttcttaaa gttggagttt taaccatgcc
    21061 attttcatct cctttaaaat cacccaaatt tgcaaattta tacttacctg caacctcaaa
    21121 tgcttgcata tttccaccta aattcacacc attatgacaa gctacacaac ctttgtcaat
    21181 gaaaagtttt aaaccttttt gctcctcttt agttaaagct ttttcatctc catttaagaa
    21241 attatcaaag cgagatggag tgattaaagt tctttcaaaa tttgctatcg catcagcaat
    21301 attgtcaaaa ttcacaccgc ttttgccata aattttctta aattctttaa catattcagg
    21361 taaagaagcg attttttcta cagctaattt tgctggagtt gccatttcag cttcagattc
    21421 aataggtcct ttggcctgat ccgctaaagt tcctgcacgc ccatcccaaa attgagtcgt
    21481 gtttaaaaca gcattatata cagttgggga atttaaatga tgagggtttg cagtccattt
    21541 atgtcccact gccgcactaa taccatcagc tccaccaagt cctagattgt gacaggtatt
    21601 acatgaaata attccacttt ttgaaaggcg aggctcaaaa taaagttttt taccaagctc
    21661 aactttatca agagtaaatt cagtagcctt tactccattt gctttcaaaa tctcatccac
    21721 gcctttttga tcttttggta aggcaactaa acctgaattt ttagcctctt ctataagact
    21781 ttgagcattt aaacttgaaa aagcaactaa tgatgcaatc aataacgatt tgactttcat
    21841 ttacaaactc ctttactttt agatataaac ttaaactaaa ataatatagc tttatta
//
